Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,992,894 |
A→G |
T175A (ACG→GCG) |
dapF → |
diaminopimelate epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,992,894 | 0 | A | G | 100.0%
| 684.0
/ NA
| 217 | T175A (ACG→GCG) | dapF | diaminopimelate epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (75/142); total (75/142) |
Only 100 of 231 total aligned reads displayed.
GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > NC_000913/3992804‑3992983
|
gccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCg > 2:4466815/1‑93 (MQ=255)
ccgAGCAGACAGTCTTATGCGGCGTGGTGTCGATAGAAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATCCCGCGGCGGTAGAAgcgc < 2:3319067/93‑1 (MQ=255)
cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt > 1:1235243/1‑93 (MQ=255)
cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt > 2:1549590/1‑93 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt < 1:1033577/93‑1 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt > 1:3650699/1‑93 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt < 2:679841/93‑1 (MQ=255)
cAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGt < 1:296783/93‑1 (MQ=255)
cAATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTg < 1:655578/93‑1 (MQ=255)
aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt > 2:1291008/1‑93 (MQ=255)
aaTCTTAGGCGGCGTTGTGTCGATGGGAAATCCGCCTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt < 1:55036/93‑1 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc > 1:169841/1‑93 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc < 2:2406717/93‑1 (MQ=255)
cTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCt < 2:2931941/93‑1 (MQ=255)
ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg < 1:4050459/93‑1 (MQ=255)
tATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTgg > 1:1130058/1‑93 (MQ=255)
aTGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGa > 1:692960/1‑93 (MQ=255)
tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaa < 2:1745152/93‑1 (MQ=255)
tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaa < 1:3885695/93‑1 (MQ=255)
tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaa < 2:3568564/93‑1 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa < 2:3036826/93‑1 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa < 1:4282405/93‑1 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc > 2:2206543/1‑93 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc < 2:2532985/93‑1 (MQ=255)
cgcgTGGTGTCGATGGGAAATCCGCATTGCGTGATGCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc < 2:2026495/92‑1 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc < 1:3043509/93‑1 (MQ=255)
cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa > 1:954656/1‑93 (MQ=255)
cgTGGTGTCGACGTGAAACCGGCATTGCGTGATTCGGGTCGGTGATGTCGATACCGCGGCGGAAGAAGCGCTTGGTCCAGTCCTGGAAAGCCa < 2:2324704/93‑1 (MQ=255)
tgtgtCGATGGGAAATCCGCATTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa < 1:67660/92‑1 (MQ=255)
gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg > 1:3499459/1‑93 (MQ=255)
tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt > 2:1356589/1‑93 (MQ=255)
tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt < 1:1016340/93‑1 (MQ=255)
gcGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt < 2:1455295/92‑1 (MQ=255)
cGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt > 2:437491/1‑93 (MQ=255)
gATGGGAAATCCGCATTGCGTGATTCGTGTCGATGATCTCGATACCGCGGCGGTAGAAGCGCTTGAACCTGTGCTGGAAAGGCACGAGCGttt < 2:1517458/93‑1 (MQ=255)
gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTTGTCCTGTTCTGGAAAGCCACGAGCGttt < 1:2681964/93‑1 (MQ=255)
tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGTAAAGCCACGAGCGTTTTc < 1:1459610/93‑1 (MQ=255)
tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc < 2:860719/93‑1 (MQ=255)
gggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc > 1:1586164/1‑93 (MQ=255)
ggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg > 1:2058718/1‑93 (MQ=255)
ggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg < 1:2569903/93‑1 (MQ=255)
aagtCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGa < 1:1412767/90‑1 (MQ=255)
acccGCATTGGTTGATTCGGGGCGATGATGCCGATACCGCGGCGGTAGAAGCAGTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc < 2:3828605/91‑1 (MQ=255)
aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc < 1:4006534/93‑1 (MQ=255)
aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc < 2:1725919/93‑1 (MQ=255)
tCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgtg > 2:123181/1‑91 (MQ=255)
tCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcg > 2:2087631/1‑93 (MQ=255)
ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc < 1:4343613/93‑1 (MQ=255)
ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc < 2:715247/93‑1 (MQ=255)
cGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcg > 1:1626751/1‑93 (MQ=255)
gCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcgc > 1:4662031/1‑93 (MQ=255)
gCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGACACGAGCGTTTTCCGGAgcgcgc > 1:2838872/1‑93 (MQ=255)
aTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa > 1:723582/1‑93 (MQ=255)
ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa > 1:2209133/1‑93 (MQ=255)
tGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAat < 1:249611/93‑1 (MQ=255)
gCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata < 1:3331304/93‑1 (MQ=255)
gtggATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat < 1:496471/90‑1 (MQ=255)
cGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat < 1:2597833/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 2:648229/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 2:3776252/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg > 2:3264468/1‑93 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg > 2:537892/1‑93 (MQ=255)
aTTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGt < 1:1983960/93‑1 (MQ=255)
gggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa < 2:2554774/92‑1 (MQ=255)
gggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa < 2:3955629/92‑1 (MQ=255)
tCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGc < 2:3551017/93‑1 (MQ=255)
cGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCa < 2:2459844/93‑1 (MQ=255)
gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa < 1:1918202/93‑1 (MQ=255)
gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa < 2:4034306/93‑1 (MQ=255)
gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa < 2:3487892/93‑1 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGTGCCAATATCGGTTTTATGCAAg > 1:3356164/1‑93 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg > 2:210932/1‑93 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg > 2:4607625/1‑93 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg < 2:4216459/93‑1 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg < 2:1528214/93‑1 (MQ=255)
tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt < 1:4411322/93‑1 (MQ=255)
tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt < 1:1518904/93‑1 (MQ=255)
tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt < 2:2797243/93‑1 (MQ=255)
tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt < 1:281680/93‑1 (MQ=255)
gatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTg > 2:3896505/1‑93 (MQ=255)
atgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTgg < 2:2240430/93‑1 (MQ=255)
atgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTgg > 1:1174163/1‑93 (MQ=255)
tgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGt > 1:1810353/1‑93 (MQ=255)
gATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAg < 2:842801/93‑1 (MQ=255)
gATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAg < 1:4120287/93‑1 (MQ=255)
aCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgcgc > 1:2096813/1‑93 (MQ=255)
ccGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGcgcg < 2:1663443/93‑1 (MQ=255)
ccGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGcgcg < 1:85865/93‑1 (MQ=255)
cgcgGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGa < 1:2337856/93‑1 (MQ=255)
gcggcgGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAg > 1:1075135/1‑93 (MQ=255)
gcggcgGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAg > 1:3590263/1‑93 (MQ=255)
gcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCat < 1:2227896/93‑1 (MQ=255)
gcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCat > 2:27829/1‑93 (MQ=255)
ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat > 1:4513028/1‑93 (MQ=255)
ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat < 2:295650/93‑1 (MQ=255)
gTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAtt < 1:3763467/93‑1 (MQ=255)
tAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTc > 2:807724/1‑93 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg < 2:2728983/93‑1 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg > 2:3249349/1‑93 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGACAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg < 1:3306762/93‑1 (MQ=255)
|
GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > NC_000913/3992804‑3992983
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC > NC_000913/3992801‑3992987
|
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG < SRR4302535.2609785/94‑1 (MQ=60)
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG < SRR4302535.1667642/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.2300831/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.4155205/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.3420619/94‑1 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG > SRR4302535.2858521/1‑94 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG < SRR4302535.1709155/94‑1 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG < SRR4302535.1358051/94‑1 (MQ=60)
GCCGAGCAGACAATCTTATGCGGCGTGGTGTTGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGC > SRR4302535.670552/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302535.2461955/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302535.1244069/1‑94 (MQ=60)
CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT > SRR4302535.3675976/1‑94 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG < SRR4302535.1959399/94‑1 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG < SRR4302535.1040918/94‑1 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACNGCGGCGGTAGAAGCGNTNGNTC > SRR4302535.1973000/1‑94 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC > SRR4302535.1841236/1‑94 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC < SRR4302535.298851/94‑1 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGCTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.2364354/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.543552/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC < SRR4302535.1511844/94‑1 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.1182616/1‑94 (MQ=60)
ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG < SRR4302535.2220279/94‑1 (MQ=60)
CAATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT < SRR4302535.660156/94‑1 (MQ=60)
AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT < SRR4302535.1795262/94‑1 (MQ=60)
AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT > SRR4302535.3358487/1‑94 (MQ=60)
AATCTTAGGCGGCGTTGTGTCGATGGGAAATCCGCCTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT < SRR4302535.55440/94‑1 (MQ=60)
ATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTC > SRR4302535.171019/1‑94 (MQ=60)
ATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTC > SRR4302535.1062337/1‑94 (MQ=60)
CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATCCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG < SRR4302535.1586450/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.2890644/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.4078189/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.495136/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG > SRR4302535.1138126/1‑94 (MQ=60)
TATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGA > SRR4302535.697818/1‑94 (MQ=60)
ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGCCGGGAGAAGCGCTTGGTCCTGTTCTGGAA > SRR4302535.2095802/1‑94 (MQ=60)
TGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAA < SRR4302535.3912347/94‑1 (MQ=60)
GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG < SRR4302535.3590288/94‑1 (MQ=60)
GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG < SRR4302535.4311703/94‑1 (MQ=60)
CGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGGAGAAGCGCTTGGTCCTGTTCTGGAAAGC > SRR4302535.37867/1‑94 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302535.4102420/94‑1 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302535.3064831/94‑1 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA > SRR4302535.961422/1‑94 (MQ=60)
CGTGGTGTCGATGGGAAATCCGCATTGGGTGATTCGGGTCGATGATGTCGATAACGCGGCGGTAGAAGCGCTTGGTCGTGTTCTGGAAAGCacc > SRR4302535.1253718/1‑91 (MQ=60)
CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC > SRR4302535.403766/1‑94 (MQ=60)
TGGTGTCGATGGGAAATCCGCAGTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTATAAGCGCTTGGTCCTGTTCTGGAAAGCaacag > SRR4302535.991046/1‑89 (MQ=60)
TGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG < SRR4302535.68164/94‑1 (MQ=60)
GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG > SRR4302535.3523789/1‑94 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCaacgacct > SRR4302535.2603314/1‑86 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGAGGATGGCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGTAAGCCACGAGCT > SRR4302535.4179108/1‑94 (MQ=60)
GTCGATGCGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT < SRR4302535.2331114/94‑1 (MQ=60)
TCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTT < SRR4302535.1023564/94‑1 (MQ=60)
CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT < SRR4302535.1680062/94‑1 (MQ=60)
GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTTGTCCTGTTCTGGAAAGCCACGAGCGTTTT < SRR4302535.2701148/94‑1 (MQ=60)
GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT < SRR4302535.2875005/94‑1 (MQ=60)
ATGGGAAATCGGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGGGTTTTC > SRR4302535.2321075/1‑94 (MQ=60)
TGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGTAAAGCCACGAGCGTTTTCC < SRR4302535.1470068/94‑1 (MQ=60)
TGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCC > SRR4302535.1597610/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG > SRR4302535.398129/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG > SRR4302535.2073549/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG < SRR4302535.1149772/94‑1 (MQ=60)
GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG < SRR4302535.2588383/94‑1 (MQ=60)
AAGTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG < SRR4302535.1422851/94‑1 (MQ=60)
AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCTGAG > SRR4302535.1468684/1‑94 (MQ=60)
ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG < SRR4302535.4033946/94‑1 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG < SRR4302535.1431070/94‑1 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG > SRR4302535.1638495/1‑94 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG < SRR4302535.4373326/94‑1 (MQ=60)
CGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGC > SRR4302535.4693559/1‑94 (MQ=60)
CGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGACACGAGCGTTTTCCGGAGCGCGC > SRR4302535.2859012/1‑94 (MQ=60)
CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA > SRR4302535.728661/1‑94 (MQ=60)
ATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAA > SRR4302535.2224868/1‑94 (MQ=60)
TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT < SRR4302535.214446/94‑1 (MQ=60)
TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA > SRR4302535.632262/1‑94 (MQ=60)
TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA < SRR4302535.251331/94‑1 (MQ=60)
GCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT < SRR4302535.3354492/94‑1 (MQ=60)
gtgGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC < SRR4302535.499955/91‑1 (MQ=60)
CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC < SRR4302535.2616491/94‑1 (MQ=60)
GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG < SRR4302535.3060747/94‑1 (MQ=60)
TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG < SRR4302535.367343/94‑1 (MQ=60)
TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG < SRR4302535.714135/94‑1 (MQ=60)
ATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT < SRR4302535.1998243/94‑1 (MQ=60)
TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT < SRR4302535.1108347/94‑1 (MQ=60)
TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT < SRR4302535.1873794/94‑1 (MQ=60)
CGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTA > SRR4302535.1598498/1‑94 (MQ=60)
GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302535.1617675/94‑1 (MQ=60)
GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302535.683992/94‑1 (MQ=60)
TCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCA > SRR4302535.3354332/1‑94 (MQ=60)
TCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCA < SRR4302535.1179213/94‑1 (MQ=60)
CGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAA < SRR4302535.1039910/94‑1 (MQ=60)
GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGTGCCAATATCGGTTTTATGCAAG > SRR4302535.3379532/1‑94 (MQ=60)
GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG < SRR4302535.3932943/94‑1 (MQ=60)
GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG < SRR4302535.1932025/94‑1 (MQ=60)
ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT < SRR4302535.2520394/94‑1 (MQ=60)
ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT < SRR4302535.4304315/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG < SRR4302535.283645/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG < SRR4302535.1529844/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG < SRR4302535.4441513/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG < SRR4302535.4441512/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGATTTATTCACGTG > SRR4302535.876268/1‑94 (MQ=60)
GATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGG > SRR4302535.1182545/1‑94 (MQ=60)
ATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGT > SRR4302535.1823447/1‑94 (MQ=60)
ATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGT < SRR4302535.2789773/94‑1 (MQ=60)
ATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGT > SRR4302535.3653449/1‑94 (MQ=60)
ATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGT < SRR4302535.4487924/94‑1 (MQ=60)
TGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTT < SRR4302535.2622484/94‑1 (MQ=60)
GATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGC < SRR4302535.2665669/94‑1 (MQ=60)
GATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGC < SRR4302535.616660/94‑1 (MQ=60)
GATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGC < SRR4302535.4148483/94‑1 (MQ=60)
ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG < SRR4302535.4565850/94‑1 (MQ=60)
ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG > SRR4302535.2000676/1‑94 (MQ=60)
ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG < SRR4302535.3398973/94‑1 (MQ=60)
TACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGC > SRR4302535.2111935/1‑94 (MQ=60)
CCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGA < SRR4302535.86467/94‑1 (MQ=60)
CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG > SRR4302535.3615165/1‑94 (MQ=60)
CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG < SRR4302535.2354584/94‑1 (MQ=60)
CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG > SRR4302535.1082776/1‑94 (MQ=60)
GCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGC < SRR4302535.1336991/94‑1 (MQ=60)
CGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCACTATCGGATTTATGCAAGTGGTTAAGCGCGAGCA > SRR4302535.4286934/1‑94 (MQ=60)
GGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCAT > SRR4302535.4331781/1‑94 (MQ=60)
GGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCAT > SRR4302535.3848247/1‑94 (MQ=60)
GGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCAT < SRR4302535.2237150/94‑1 (MQ=60)
GGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCAT < SRR4302535.3375962/94‑1 (MQ=60)
GCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATA < SRR4302535.2243745/94‑1 (MQ=60)
CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT < SRR4302535.712790/94‑1 (MQ=60)
CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT > SRR4302535.4543975/1‑94 (MQ=60)
GTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTC < SRR4302535.792512/94‑1 (MQ=60)
GTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTC < SRR4302535.3789466/94‑1 (MQ=60)
GTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGAGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTC < SRR4302535.3318447/94‑1 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > SRR4302535.4501990/1‑94 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGACAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT < SRR4302535.3329771/94‑1 (MQ=60)
GAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTT > SRR4302535.3603926/1‑94 (MQ=60)
AAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTT < SRR4302535.3708862/94‑1 (MQ=60)
AGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA < SRR4302535.2227079/94‑1 (MQ=60)
AGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA > SRR4302535.4100157/1‑94 (MQ=60)
GCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC < SRR4302535.2545686/94‑1 (MQ=60)
GCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC < SRR4302535.333167/94‑1 (MQ=60)
|
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC > NC_000913/3992801‑3992987
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
