Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,992,862	A→G	Q164R (CAG→CGG)	dapF →	diaminopimelate epimerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,992,862	0	A	G	99.7%	1111.0 / ‑5.4	356	Q164R (CAG→CGG)	dapF	diaminopimelate epimerase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (171/184); total (172/184)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 375 total aligned reads displayed.

ACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT  >  NC_000913/3992772‑3992951

aCAAAGCGGAAAAGATCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCggg                                                                                         <  1:1004681/93‑1 (MQ=255)

aCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCggg                                                                                         <  1:6787583/93‑1 (MQ=255)

aCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCggg                                                                                         >  1:3155878/1‑93 (MQ=255)

  aaaGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGtg                                                                                       >  1:4629754/1‑92 (MQ=255)

   aaGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCg                                                                                      >  2:2802769/1‑93 (MQ=255)

    aGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCga                                                                                     <  2:7694557/93‑1 (MQ=255)

    aGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCga                                                                                     <  2:2156787/93‑1 (MQ=255)

     gCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgat                                                                                    <  1:5709078/93‑1 (MQ=255)

     gCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgat                                                                                    <  1:1467449/93‑1 (MQ=255)

     gCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgat                                                                                    >  1:6871438/1‑93 (MQ=255)

       ggAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatga                                                                                  <  1:720079/93‑1 (MQ=255)

       ggAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatga                                                                                  >  2:3176167/1‑93 (MQ=255)

        gAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatgat                                                                                 <  1:5472067/93‑1 (MQ=255)

        gAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatgat                                                                                 >  2:1520322/1‑93 (MQ=255)

         aaaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGatgatg                                                                                >  1:3967491/1‑93 (MQ=255)

         aaaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGatgatg                                                                                >  1:1293487/1‑93 (MQ=255)

          aaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGt                                                                               >  2:3396412/1‑93 (MQ=255)

          aaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGt                                                                               >  2:6353763/1‑93 (MQ=255)

           aaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTc                                                                              >  1:1164055/1‑93 (MQ=255)

           aaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTc                                                                              <  2:7487101/93‑1 (MQ=255)

             gACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGa                                                                            <  2:1237029/93‑1 (MQ=255)

             gACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGa                                                                            <  1:5077051/93‑1 (MQ=255)

              aCCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAt                                                                           <  1:6260950/93‑1 (MQ=255)

               ccTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATa                                                                          <  2:5554608/93‑1 (MQ=255)

               ccTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATa                                                                          >  2:816474/1‑93 (MQ=255)

               ccTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGAAATTCCGCATTGCGTGATTCGGGTCGATGATGTCGATa                                                                          <  2:7051914/93‑1 (MQ=255)

                cTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAc                                                                         <  2:6406486/93‑1 (MQ=255)

                 tataTTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAcc                                                                        >  2:3812784/1‑93 (MQ=255)

                  atatTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcg                                                                       >  2:6165364/1‑93 (MQ=255)

                   tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgc                                                                      <  2:6003323/93‑1 (MQ=255)

                   tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgc                                                                      >  2:170619/1‑93 (MQ=255)

                   tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgc                                                                      >  2:252363/1‑93 (MQ=255)

                   tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgc                                                                      <  2:3244357/93‑1 (MQ=255)

                    attatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgcg                                                                     >  2:4137918/1‑93 (MQ=255)

                      tatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCgcggc                                                                   >  1:5312929/1‑93 (MQ=255)

                        tGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGcggcgg                                                                 >  1:6645518/1‑93 (MQ=255)

                          ggcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTa                                                               <  1:5408658/92‑1 (MQ=255)

                          cgcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTa                                                               <  1:7532114/93‑1 (MQ=255)

                           gcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAg                                                              <  1:2005290/93‑1 (MQ=255)

                             gccgccGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaa                                                            <  1:3309320/93‑1 (MQ=255)

                              ccgccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaag                                                           <  1:3756758/93‑2 (MQ=255)

                               cgccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaagc                                                          >  2:3068698/1‑91 (MQ=255)

                                 ccgAGCGGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAgcgc                                                        >  1:963400/1‑93 (MQ=255)

                                 ccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGTCGGTAGAAgcgc                                                        <  2:5756917/93‑1 (MQ=255)

                                 ccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAgcgc                                                        >  1:1058033/1‑93 (MQ=255)

                                  cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt                                                       <  1:4850092/93‑1 (MQ=255)

                                   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                      >  1:6609119/1‑93 (MQ=255)

                                   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                      <  2:6959193/93‑1 (MQ=255)

                                   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                      >  1:5515403/1‑93 (MQ=255)

                                   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                      >  1:447179/1‑93 (MQ=255)

                                    aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg                                                     >  1:745954/1‑93 (MQ=255)

                                    aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg                                                     >  1:6064145/1‑93 (MQ=255)

                                     gCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTgg                                                    >  1:1575045/1‑93 (MQ=255)

                                       aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc                                                  >  1:2902241/1‑93 (MQ=255)

                                        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                 >  2:2862279/1‑93 (MQ=255)

                                        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                 <  2:7305956/93‑1 (MQ=255)

                                         aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                >  1:5426453/1‑93 (MQ=255)

                                          cAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTg                                               <  1:2770159/93‑1 (MQ=255)

                                           aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt                                              <  1:2514516/93‑1 (MQ=255)

                                           aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt                                              >  2:4025832/1‑93 (MQ=255)

                                               ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                          >  1:7811586/1‑93 (MQ=255)

                                               ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                          <  2:4949147/93‑1 (MQ=255)

                                                   gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa                                      <  2:7848529/93‑1 (MQ=255)

                                                     ggcgTGGTTTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc                                    <  1:377578/93‑1 (MQ=255)

                                                       cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa                                  <  2:2309786/93‑1 (MQ=255)

                                                       cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa                                  <  1:6973726/93‑1 (MQ=255)

                                                        gtggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc                                 <  1:4343463/93‑1 (MQ=255)

                                                         tggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACg                                >  1:409769/1‑93 (MQ=255)

                                                          ggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa                               <  2:5116973/93‑1 (MQ=255)

                                                           gtgtGGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg                              <  1:5220493/93‑1 (MQ=255)

                                                            tgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                             >  1:365645/1‑93 (MQ=255)

                                                            tgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                             <  1:2390792/93‑1 (MQ=255)

                                                            tgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                             <  2:7550805/93‑1 (MQ=255)

                                                              tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt                           <  1:492226/93‑1 (MQ=255)

                                                              tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt                           <  2:4681940/93‑1 (MQ=255)

                                                                gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt                         >  1:4216323/1‑93 (MQ=255)

                                                                gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt                         >  1:7865167/1‑93 (MQ=255)

                                                                gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt                         <  1:7599240/93‑1 (MQ=255)

                                                                gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt                         >  2:4784542/1‑93 (MQ=255)

                                                                 aTGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtttt                        <  2:4423113/93‑1 (MQ=255)

                                                                    ggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                     <  1:560894/93‑1 (MQ=255)

                                                                     gAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTGCgg                    <  2:5316674/93‑1 (MQ=255)

                                                                     gAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCgg                    <  2:657617/93‑1 (MQ=255)

                                                                      aaaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGa                   <  1:3035339/93‑1 (MQ=255)

                                                                       aaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAg                  <  2:3651087/93‑1 (MQ=255)

                                                                       aaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTATGGAAAGCCACGAGCGTTTTCCGGAg                  >  2:4448307/1‑93 (MQ=255)

                                                                        aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                 >  1:6402291/1‑93 (MQ=255)

                                                                        aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                 >  2:5058944/1‑93 (MQ=255)

                                                                          ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc               <  2:3508494/93‑1 (MQ=255)

                                                                           cGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcg              >  2:2050972/1‑93 (MQ=255)

                                                                             cATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGcc            >  2:2385420/1‑93 (MQ=255)

                                                                               ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa          <  2:1379144/93‑1 (MQ=255)

                                                                                  cGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat       <  1:2143029/93‑1 (MQ=255)

                                                                                  cGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat       <  1:4551695/93‑1 (MQ=255)

                                                                                   gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatatg      >  1:4729572/1‑92 (MQ=255)

                                                                                   gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc      >  2:6865449/1‑93 (MQ=255)

                                                                                   gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc      <  2:2778699/93‑1 (MQ=255)

                                                                                     gATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg    >  1:5574030/1‑93 (MQ=255)

                                                                                       ttCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt  <  1:5951781/93‑1 (MQ=255)

                                                                                       ttCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt  <  1:1898571/93‑1 (MQ=255)

ACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT  >  NC_000913/3992772‑3992951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 218 total aligned reads displayed.

CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT  >  NC_000913/3992769‑3992955

CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCG                                                                                               <  SRR4302543.2529000/94‑1 (MQ=60)

CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCG                                                                                               >  SRR4302543.7764671/1‑94 (MQ=60)

 TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG                                                                                              >  SRR4302543.4437416/1‑94 (MQ=60)

 TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG                                                                                              >  SRR4302543.7244333/1‑94 (MQ=60)

 TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG                                                                                              >  SRR4302543.1449442/1‑94 (MQ=60)

 TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG                                                                                              <  SRR4302543.6184180/94‑1 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             >  SRR4302543.3734425/1‑94 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             <  SRR4302543.2169716/94‑1 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             <  SRR4302543.780945/94‑1 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             >  SRR4302543.4246184/1‑94 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             <  SRR4302543.1715252/94‑1 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             >  SRR4302543.5458168/1‑94 (MQ=60)

  AACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGG                                                                                             >  SRR4302543.3184283/1‑94 (MQ=60)

   ACAAAGCGGAAAAGATCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGT                                                                                            <  SRR4302543.1013568/94‑1 (MQ=60)

   ACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGT                                                                                            <  SRR4302543.6851685/94‑1 (MQ=60)

    CAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTC                                                                                           <  SRR4302543.5629073/94‑1 (MQ=60)

     AAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCG                                                                                          <  SRR4302543.7666286/94‑1 (MQ=60)

       AGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGAT                                                                                        >  SRR4302543.6936154/1‑94 (MQ=60)

       AGCGGAAAAGACATATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGAT                                                                                        <  SRR4302543.7118319/94‑1 (MQ=60)

        GCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATG                                                                                       <  SRR4302543.1480668/94‑1 (MQ=60)

        GCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATG                                                                                       <  SRR4302543.5761163/94‑1 (MQ=60)

         CGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGA                                                                                      <  SRR4302543.124095/94‑1 (MQ=60)

         CGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGA                                                                                      <  SRR4302543.357914/94‑1 (MQ=60)

          GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT                                                                                     <  SRR4302543.7466391/94‑1 (MQ=60)

          GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT                                                                                     >  SRR4302543.1994316/1‑94 (MQ=60)

          GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT                                                                                     <  SRR4302543.726581/94‑1 (MQ=60)

          GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT                                                                                     >  SRR4302543.753188/1‑94 (MQ=60)

          GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT                                                                                     <  SRR4302543.4108932/94‑1 (MQ=60)

           GAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATG                                                                                    <  SRR4302543.5521644/94‑1 (MQ=60)

           GAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATG                                                                                    >  SRR4302543.6659948/1‑94 (MQ=60)

           GAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATG                                                                                    >  SRR4302543.4002656/1‑94 (MQ=60)

           GAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTAGGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATG                                                                                    <  SRR4302543.5521645/94‑1 (MQ=60)

            AAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGAGTCGGGTCGATGATGT                                                                                   >  SRR4302543.5653375/1‑94 (MQ=60)

             AAATACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  <  SRR4302543.5412930/94‑1 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  >  SRR4302543.922416/1‑94 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  >  SRR4302543.911391/1‑94 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  <  SRR4302543.1159395/94‑1 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  >  SRR4302543.1174649/1‑94 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  <  SRR4302543.6900304/94‑1 (MQ=60)

             AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGGCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC                                                                                  >  SRR4302543.3843358/1‑94 (MQ=60)

              AAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCG                                                                                 <  SRR4302543.6956330/94‑1 (MQ=60)

              AAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCG                                                                                 <  SRR4302543.6956331/94‑1 (MQ=60)

              AAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCG                                                                                 <  SRR4302543.7206353/94‑1 (MQ=60)

                GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT                                                                               <  SRR4302543.5123111/94‑1 (MQ=60)

                GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT                                                                               <  SRR4302543.1209572/94‑1 (MQ=60)

                GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT                                                                               <  SRR4302543.7595328/94‑1 (MQ=60)

                GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT                                                                               >  SRR4302543.5184388/1‑94 (MQ=60)

                GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT                                                                               <  SRR4302543.1648404/94‑1 (MQ=60)

                 ACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATA                                                                              <  SRR4302543.6320001/94‑1 (MQ=60)

                 ACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATA                                                                              <  SRR4302543.7020696/94‑1 (MQ=60)

                  CCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAC                                                                             <  SRR4302543.6292829/94‑1 (MQ=60)

                  CCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAC                                                                             <  SRR4302543.640913/94‑1 (MQ=60)

                   CTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACC                                                                            >  SRR4302543.4665565/1‑94 (MQ=60)

                   CTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACC                                                                            <  SRR4302543.6250865/94‑1 (MQ=60)

                    TATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCG                                                                           <  SRR4302543.3222820/94‑1 (MQ=60)

                    TATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCG                                                                           <  SRR4302543.7562036/94‑1 (MQ=60)

                     ATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGC                                                                          >  SRR4302543.2727685/1‑94 (MQ=60)

                     ATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGC                                                                          >  SRR4302543.7632416/1‑94 (MQ=60)

                      TATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCG                                                                         >  SRR4302543.4793430/1‑94 (MQ=60)

                       ATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGG                                                                        <  SRR4302543.4322879/94‑1 (MQ=60)

                       ATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGG                                                                        >  SRR4302543.7820111/1‑94 (MQ=60)

                        TTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGC                                                                       >  SRR4302543.5360925/1‑94 (MQ=60)

                        TTATGCGCGCCGCCGAGCAGACAATCCTATGCGGCCTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAgacgcgggc                                                                       >  SRR4302543.4055389/1‑85 (MQ=60)

                          ATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGG                                                                     >  SRR4302543.6708239/1‑94 (MQ=60)

                          ATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGG                                                                     >  SRR4302543.504803/1‑94 (MQ=60)

                          ATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGG                                                                     <  SRR4302543.4895984/94‑1 (MQ=60)

                             GGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG                                                                  <  SRR4302543.5457833/94‑1 (MQ=60)

                             CGCGCCGCCGAGCAGACAATCTTATGCGGCGTTGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG                                                                  <  SRR4302543.6755568/94‑1 (MQ=60)

                             CGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG                                                                  <  SRR4302543.5457834/94‑1 (MQ=60)

                             CGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG                                                                  <  SRR4302543.7603942/94‑1 (MQ=60)

                             CGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAC                                                                  >  SRR4302543.7922306/1‑94 (MQ=60)

                              GCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGA                                                                 <  SRR4302543.2023309/94‑1 (MQ=60)

                               CGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAA                                                                <  SRR4302543.7972096/94‑1 (MQ=60)

                                GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG                                                               <  SRR4302543.3339188/94‑1 (MQ=60)

                                GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG                                                               <  SRR4302543.3599038/94‑1 (MQ=60)

                                 CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC                                                              <  SRR4302543.3789814/94‑1 (MQ=60)

                                  CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACTGCGGCGcagaagcgc                                                             >  SRR4302543.7506985/1‑85 (MQ=60)

                                  CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG                                                             <  SRR4302543.6842275/94‑1 (MQ=60)

                                  CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG                                                             <  SRR4302543.3473887/94‑1 (MQ=60)

                                   GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGC                                                            >  SRR4302543.1067520/1‑94 (MQ=60)

                                    CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAgggct                                                           >  SRR4302543.5335578/1‑89 (MQ=60)

                                    CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT                                                           >  SRR4302543.4846335/1‑94 (MQ=60)

                                     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                          <  SRR4302543.7936244/94‑1 (MQ=60)

                                     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                          >  SRR4302543.5565496/1‑94 (MQ=60)

                                     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                          >  SRR4302543.451361/1‑94 (MQ=60)

                                     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                          >  SRR4302543.6671408/1‑94 (MQ=60)

                                      GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG                                                         >  SRR4302543.6121613/1‑94 (MQ=60)

                                      GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG                                                         >  SRR4302543.752591/1‑94 (MQ=60)

                                       AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG                                                        >  SRR4302543.1589099/1‑94 (MQ=60)

                                         CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC                                                      >  SRR4302543.2928627/1‑94 (MQ=60)

                                         CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC                                                      >  SRR4302543.1669626/1‑94 (MQ=60)

                                          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                     >  SRR4302543.6847664/1‑94 (MQ=60)

                                          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                     >  SRR4302543.3104850/1‑94 (MQ=60)

                                          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                     >  SRR4302543.5204179/1‑94 (MQ=60)

                                          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                     <  SRR4302543.6678018/94‑1 (MQ=60)

                                          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                     <  SRR4302543.6678017/94‑1 (MQ=60)

                                           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                    >  SRR4302543.2953188/1‑94 (MQ=60)

                                           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                    >  SRR4302543.5475769/1‑94 (MQ=60)

                                           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                    <  SRR4302543.463807/94‑1 (MQ=60)

                                            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTT                                                   >  SRR4302543.2144981/1‑94 (MQ=60)

                                            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                   <  SRR4302543.561550/94‑1 (MQ=60)

                                            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                   <  SRR4302543.561551/94‑1 (MQ=60)

                                            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGCCGATGATGTCGATACCGCGGCGGAAGAAGCGCTTGGTCCTT                                                   >  SRR4302543.5551403/1‑94 (MQ=60)

                                            ACAATCTTATGCGGCGTGGCGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                   >  SRR4302543.432251/1‑94 (MQ=60)

                                             caagtTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                  <  SRR4302543.4059964/89‑1 (MQ=60)

                                             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                  <  SRR4302543.2795371/94‑1 (MQ=60)

                                             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                  <  SRR4302543.4059965/94‑1 (MQ=60)

                                             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTAGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                  <  SRR4302543.5455383/94‑1 (MQ=60)

                                              AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT                                                 >  SRR4302543.325294/1‑94 (MQ=60)

                                              AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT                                                 <  SRR4302543.2537350/94‑1 (MQ=60)

                                                 CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG                                              >  SRR4302543.5077620/1‑94 (MQ=60)

                                                 CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG                                              >  SRR4302543.7885211/1‑94 (MQ=60)

                                                  TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG                                             <  SRR4302543.7226104/94‑1 (MQ=60)

                                                   TATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGA                                            <  SRR4302543.1044889/94‑1 (MQ=60)

                                                    ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAA                                           >  SRR4302543.5587452/1‑94 (MQ=60)

                                                    ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAA                                           >  SRR4302543.6613771/1‑94 (MQ=60)

                                                      GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG                                         <  SRR4302543.2574564/94‑1 (MQ=60)

                                                      GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG                                         <  SRR4302543.2071158/94‑1 (MQ=60)

                                                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC                                       >  SRR4302543.1540550/1‑94 (MQ=60)

                                                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC                                       <  SRR4302543.381055/94‑1 (MQ=60)

                                                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGGAGAAGCGCTTGGGCCTGTTCTGGAAAGGC                                       >  SRR4302543.5549364/1‑94 (MQ=60)

                                                         GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA                                      >  SRR4302543.3804819/1‑94 (MQ=60)

                                                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                     <  SRR4302543.1953251/94‑1 (MQ=60)

                                                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                     <  SRR4302543.7039349/94‑1 (MQ=60)

                                                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                     >  SRR4302543.5315400/1‑94 (MQ=60)

                                                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                     <  SRR4302543.7646702/94‑1 (MQ=60)

                                                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                    >  SRR4302543.3912356/1‑94 (MQ=60)

                                                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                    <  SRR4302543.5998684/94‑1 (MQ=60)

                                                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                    <  SRR4302543.4382853/94‑1 (MQ=60)

                                                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                    >  SRR4302543.413555/1‑94 (MQ=60)

                                                            TGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAACGCCACGA                                   >  SRR4302543.29223/1‑94 (MQ=60)

                                                            TGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGA                                   >  SRR4302543.2975316/1‑94 (MQ=60)

                                                             GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG                                  <  SRR4302543.4734647/94‑1 (MQ=60)

                                                             GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG                                  <  SRR4302543.6369701/94‑1 (MQ=60)

                                                              GTGTGGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                 <  SRR4302543.5267512/94‑1 (MQ=60)

                                                              GTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                 <  SRR4302543.6696638/94‑1 (MQ=60)

                                                              GTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                 >  SRR4302543.369027/1‑94 (MQ=60)

                                                               TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCG                                <  SRR4302543.2412426/94‑1 (MQ=60)

                                                                GTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT                               <  SRR4302543.3116653/94‑1 (MQ=60)

                                                                GTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT                               >  SRR4302543.3069945/1‑94 (MQ=60)

                                                                 TCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTT                              <  SRR4302543.496772/94‑1 (MQ=60)

                                                                  CGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                             <  SRR4302543.1020405/94‑1 (MQ=60)

                                                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                             <  SRR4302543.4591099/94‑1 (MQ=60)

                                                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                             >  SRR4302543.7939230/1‑94 (MQ=60)

                                                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                             >  SRR4302543.5744528/1‑94 (MQ=60)

                                                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                             >  SRR4302543.4254550/1‑94 (MQ=60)

                                                                   GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT                            <  SRR4302543.7671409/94‑1 (MQ=60)

                                                                   GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT                            >  SRR4302543.116228/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGCAGCGCTTGGTCCTGTTCTGGACAGCCACGAGCGTTTTC                           >  SRR4302543.5484333/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           >  SRR4302543.3801809/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           >  SRR4302543.5853042/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           <  SRR4302543.2600465/94‑1 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           >  SRR4302543.1495619/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           >  SRR4302543.3699360/1‑94 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                           <  SRR4302543.4058430/94‑1 (MQ=60)

                                                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGCTTTC                           >  SRR4302543.6007422/1‑94 (MQ=60)

                                                                      GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG                         <  SRR4302543.5414081/94‑1 (MQ=60)

                                                                      GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG                         >  SRR4302543.4414306/1‑94 (MQ=60)

                                                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGCGAGTTTTCCGG                        >  SRR4302543.4408294/1‑94 (MQ=60)

                                                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                        <  SRR4302543.566032/94‑1 (MQ=60)

                                                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                        <  SRR4302543.2872508/94‑1 (MQ=60)

                                                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                        <  SRR4302543.2213450/94‑1 (MQ=60)

                                                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                        >  SRR4302543.4408293/1‑94 (MQ=60)

                                                                       GGAAAGCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                        <  SRR4302543.566033/94‑1 (MQ=60)

                                                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGcgg                      >  SRR4302543.2437445/1‑91 (MQ=60)

                                                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG                      >  SRR4302543.6361642/1‑94 (MQ=60)

                                                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG                      <  SRR4302543.3062734/94‑1 (MQ=60)

                                                                          AATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC                     >  SRR4302543.1463255/1‑94 (MQ=60)

                                                                          AATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC                     >  SRR4302543.6462564/1‑94 (MQ=60)

                                                                           ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG                    >  SRR4302543.4904629/1‑94 (MQ=60)

                                                                           ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG                    <  SRR4302543.5359710/94‑1 (MQ=60)

                                                                             gcgaATTGCGTGATTCGGGTCGATGAGTTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG                  <  SRR4302543.787054/90‑1 (MQ=60)

                                                                             CCGCATTGCGTGATTCGGGTCGGTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG                  <  SRR4302543.2507372/94‑1 (MQ=60)

                                                                               GCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCC                <  SRR4302543.6933006/94‑1 (MQ=60)

                                                                                CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA               <  SRR4302543.4722988/94‑1 (MQ=60)

                                                                                CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA               >  SRR4302543.214903/1‑94 (MQ=60)

                                                                                 ATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAA              >  SRR4302543.1438600/1‑94 (MQ=60)

                                                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT             <  SRR4302543.5263967/94‑1 (MQ=60)

                                                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT             <  SRR4302543.1935572/94‑1 (MQ=60)

                                                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT             <  SRR4302543.1443166/94‑1 (MQ=60)

                                                                                   TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA            <  SRR4302543.4925983/94‑1 (MQ=60)

                                                                                    GCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT           <  SRR4302543.5732000/94‑1 (MQ=60)

                                                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATG          >  SRR4302543.4772782/1‑94 (MQ=60)

                                                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC          <  SRR4302543.2162211/94‑1 (MQ=60)

                                                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC          <  SRR4302543.4593146/94‑1 (MQ=60)

                                                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC          >  SRR4302543.4772783/1‑94 (MQ=60)

                                                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTGCGGAGCGCGCCAATATCG         >  SRR4302543.4255062/1‑94 (MQ=60)

                                                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG         <  SRR4302543.1300838/94‑1 (MQ=60)

                                                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG         <  SRR4302543.1169771/94‑1 (MQ=60)

                                                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG         >  SRR4302543.2414217/1‑94 (MQ=60)

                                                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG         >  SRR4302543.3981923/1‑94 (MQ=60)

                                                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG        >  SRR4302543.4563269/1‑94 (MQ=60)

                                                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG        <  SRR4302543.5801776/94‑1 (MQ=60)

                                                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG        >  SRR4302543.5624765/1‑94 (MQ=60)

                                                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG        >  SRR4302543.5517072/1‑94 (MQ=60)

                                                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCCCCAATATCGG        >  SRR4302543.6109310/1‑94 (MQ=60)

                                                                                          TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT     <  SRR4302543.1915650/94‑1 (MQ=60)

                                                                                          TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT     <  SRR4302543.6006248/94‑1 (MQ=60)

                                                                                             GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT  <  SRR4302543.110868/94‑1 (MQ=60)

                                                                                             GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT  <  SRR4302543.3952006/94‑1 (MQ=60)

CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT  >  NC_000913/3992769‑3992955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`