Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,071,901 |
G→A |
A197T (GCC→ACC) |
yihV → |
putative kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,071,901 | 0 | G | A | 100.0%
| 776.3
/ NA
| 217 | A197T (GCC→ACC) | yihV | putative kinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (95/122); total (95/122) |
Only 100 of 219 total aligned reads displayed.
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT > NC_000913/4071811‑4071990
|
ccgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAcc < 1:145901/93‑1 (MQ=255)
cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa > 2:1996888/1‑93 (MQ=255)
gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg < 1:4601864/93‑1 (MQ=255)
gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg < 2:1818633/93‑1 (MQ=255)
cAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGt < 2:213394/93‑1 (MQ=255)
ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc > 2:3279306/1‑93 (MQ=255)
gATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcg > 1:1719033/1‑93 (MQ=255)
atatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcgc < 2:388048/93‑1 (MQ=255)
tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt > 1:813177/1‑93 (MQ=255)
tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt < 1:1322327/93‑1 (MQ=255)
atCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTa > 1:2246202/1‑93 (MQ=255)
aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa < 1:1028524/93‑1 (MQ=255)
aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa < 2:2601644/93‑1 (MQ=255)
aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa < 1:1850684/93‑1 (MQ=255)
aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa > 1:1651954/1‑93 (MQ=255)
gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc < 1:65832/93‑1 (MQ=255)
tGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACa < 2:2233302/93‑1 (MQ=255)
tGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACa > 1:3566632/1‑93 (MQ=255)
gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc < 1:454624/93‑1 (MQ=255)
gCTGGTGGCATTAAGCGATCACGCCGCCTTTTCAGAACCGGGTCTGCCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc < 1:122720/93‑1 (MQ=255)
cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca > 2:586917/1‑93 (MQ=255)
gtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaa > 2:2698611/1‑93 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa < 2:2774520/93‑1 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa < 1:4389599/93‑1 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa > 2:4030122/1‑93 (MQ=255)
ggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAc < 1:2386520/93‑1 (MQ=255)
ggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAc > 1:724007/1‑93 (MQ=255)
gCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACg > 1:298057/1‑93 (MQ=255)
gCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACg > 1:595129/1‑93 (MQ=255)
cATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGc > 2:3500169/1‑93 (MQ=255)
cATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGc > 2:247003/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 2:2438779/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 1:2162064/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 1:766798/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 2:1033973/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 1:3810868/1‑93 (MQ=255)
ttAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc > 2:3581047/1‑93 (MQ=255)
ttAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc > 1:4454065/1‑93 (MQ=255)
ttAAGCGATCACGCGGCCTTTTCAGAACCGGGGCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc > 1:1958393/1‑93 (MQ=255)
tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca > 2:3016362/1‑93 (MQ=255)
tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca > 1:2550471/1‑93 (MQ=255)
cGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaaa < 1:2868050/93‑1 (MQ=255)
cGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaaa < 2:2299040/93‑1 (MQ=255)
gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt < 1:2781562/93‑1 (MQ=255)
gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt > 2:46959/1‑93 (MQ=255)
aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg > 1:63921/1‑93 (MQ=255)
tCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATgg < 1:1141185/93‑1 (MQ=255)
tCACGCGCCCTTTTCAGAACCGGGTCTGGCACGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATgg < 2:3635887/93‑1 (MQ=255)
cACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGt < 2:1220382/93‑1 (MQ=255)
aCGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTc < 1:3936878/93‑1 (MQ=255)
cgcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCa < 2:1282954/93‑1 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt > 2:3976554/1‑93 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt < 1:1800862/93‑1 (MQ=255)
cgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATg < 1:1339371/93‑1 (MQ=255)
ggcTTTTCAGAACCGGGTCTTGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc < 2:746430/91‑1 (MQ=255)
gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc > 1:509831/1‑93 (MQ=255)
cTTTCCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTa < 2:1379436/93‑1 (MQ=255)
tttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTGATGTCTAtg > 2:3764419/1‑93 (MQ=255)
tttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtg < 1:3407240/93‑1 (MQ=255)
cAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGa < 2:559740/93‑1 (MQ=255)
aGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAc < 2:4586096/93‑1 (MQ=255)
gAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAcc < 1:4304458/93‑1 (MQ=255)
gAACCGGGACTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAcc > 2:4577261/1‑93 (MQ=255)
aaCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAccc < 2:1055113/93‑1 (MQ=255)
aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCa > 1:3275048/1‑93 (MQ=255)
ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg < 2:2915031/93‑1 (MQ=255)
ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg < 1:2026093/93‑1 (MQ=255)
ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg < 1:3141986/93‑1 (MQ=255)
ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg > 2:1465434/1‑93 (MQ=255)
cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg < 2:1698638/93‑1 (MQ=255)
cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg < 2:1635946/93‑1 (MQ=255)
ggTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGt > 2:3087821/1‑93 (MQ=255)
tCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAg > 2:1577726/1‑93 (MQ=255)
tCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAg > 1:4254069/1‑93 (MQ=255)
gcTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAg < 1:1538830/92‑1 (MQ=255)
ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc > 1:3315575/1‑93 (MQ=255)
ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc < 1:1608085/93‑1 (MQ=255)
gcgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCa < 2:1105593/93‑1 (MQ=255)
cgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAg < 1:2631124/93‑1 (MQ=255)
cgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGc < 2:1279036/93‑1 (MQ=255)
gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCt < 1:375014/93‑1 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCGGGCTg > 2:66835/1‑93 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg > 1:4213179/1‑93 (MQ=255)
ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc > 2:4088953/1‑93 (MQ=255)
tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg > 1:3724852/1‑93 (MQ=255)
aaCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGa < 2:3448429/93‑1 (MQ=255)
aCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAc > 1:4167579/1‑93 (MQ=255)
ggCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActgg < 1:4069812/93‑1 (MQ=255)
cGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggct < 1:1274223/93‑1 (MQ=255)
gTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctg < 1:3032836/93‑1 (MQ=255)
aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa < 1:2733114/93‑1 (MQ=255)
aaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaa > 1:205661/1‑93 (MQ=255)
aaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaa < 2:1093147/93‑1 (MQ=255)
agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa < 2:332727/93‑1 (MQ=255)
agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa > 2:498888/1‑93 (MQ=255)
gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaag > 2:918264/1‑92 (MQ=255)
gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt < 1:2917452/93‑1 (MQ=255)
agaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtg > 1:3207570/1‑93 (MQ=255)
gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg < 2:4415614/93‑1 (MQ=255)
gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg < 1:4371317/93‑1 (MQ=255)
|
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT > NC_000913/4071811‑4071990
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC > NC_000913/4071811‑4071994
|
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCA < SRR4302535.146917/94‑1 (MQ=60)
GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT < SRR4302535.4633160/94‑1 (MQ=60)
GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT < SRR4302535.570421/94‑1 (MQ=60)
AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC > SRR4302535.4213274/1‑94 (MQ=60)
GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG > SRR4302535.1731466/1‑94 (MQ=60)
ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT > SRR4302535.818877/1‑94 (MQ=60)
ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT > SRR4302535.3289428/1‑94 (MQ=60)
ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT > SRR4302535.250107/1‑94 (MQ=60)
ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT < SRR4302535.4402316/94‑1 (MQ=60)
TATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTA > SRR4302535.2262173/1‑94 (MQ=60)
TATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTA < SRR4302535.1331765/94‑1 (MQ=60)
TATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTA < SRR4302535.1331766/94‑1 (MQ=60)
TATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTA < SRR4302535.1636530/94‑1 (MQ=60)
CAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAA > SRR4302535.1663901/1‑94 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC < SRR4302535.1035827/94‑1 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC < SRR4302535.265219/94‑1 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC < SRR4302535.1864022/94‑1 (MQ=60)
GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA < SRR4302535.66326/94‑1 (MQ=60)
GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA > SRR4302535.3591357/1‑94 (MQ=60)
GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA < SRR4302535.4298580/94‑1 (MQ=60)
TGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG < SRR4302535.67279/94‑1 (MQ=60)
GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG < SRR4302535.1782778/94‑1 (MQ=60)
GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG > SRR4302535.191165/1‑94 (MQ=60)
AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC < SRR4302535.1982017/94‑1 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA < SRR4302535.2396047/94‑1 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA < SRR4302535.457809/94‑1 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA < SRR4302535.434711/94‑1 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCCGCCTTTTCAGAACCGGGTCTGCCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA < SRR4302535.123582/94‑1 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC < SRR4302535.3100370/94‑1 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC < SRR4302535.1438987/94‑1 (MQ=60)
TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC > SRR4302535.729089/1‑94 (MQ=60)
TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC < SRR4302535.4419633/94‑1 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG > SRR4302535.599299/1‑94 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG < SRR4302535.2403671/94‑1 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG > SRR4302535.300132/1‑94 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACA < SRR4302535.658633/94‑1 (MQ=60)
GCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGC < SRR4302535.2770778/94‑1 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT > SRR4302535.3837163/1‑94 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT > SRR4302535.2177581/1‑94 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT < SRR4302535.63981/94‑1 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT > SRR4302535.772197/1‑94 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT < SRR4302535.4640855/94‑1 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302535.3405120/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC < SRR4302535.4129244/94‑1 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302535.3577807/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302535.4412766/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302535.4484611/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGGCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302535.1972491/1‑94 (MQ=60)
TTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCA > SRR4302535.2568833/1‑94 (MQ=60)
CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT < SRR4302535.1677335/94‑1 (MQ=60)
CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT < SRR4302535.2888362/94‑1 (MQ=60)
GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG < SRR4302535.2801366/94‑1 (MQ=60)
GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG > SRR4302535.64401/1‑94 (MQ=60)
ATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG < SRR4302535.3201680/94‑1 (MQ=60)
ATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG < SRR4302535.3804057/94‑1 (MQ=60)
TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT < SRR4302535.1149318/94‑1 (MQ=60)
CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC < SRR4302535.2979323/94‑1 (MQ=60)
CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC > SRR4302535.3880478/1‑94 (MQ=60)
CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC < SRR4302535.2183334/94‑1 (MQ=60)
ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA < SRR4302535.3963732/94‑1 (MQ=60)
GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG < SRR4302535.1813880/94‑1 (MQ=60)
CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT < SRR4302535.1348928/94‑1 (MQ=60)
GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC > SRR4302535.513398/1‑94 (MQ=60)
CCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTA > SRR4302535.3696038/1‑94 (MQ=60)
TTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGT > SRR4302535.1307812/1‑94 (MQ=60)
TTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGT < SRR4302535.3430953/94‑1 (MQ=60)
GAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCC < SRR4302535.4333908/94‑1 (MQ=60)
AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCA > SRR4302535.3297795/1‑94 (MQ=60)
CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG > SRR4302535.755199/1‑94 (MQ=60)
CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG < SRR4302535.3163847/94‑1 (MQ=60)
CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG < SRR4302535.2040693/94‑1 (MQ=60)
CGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGG > SRR4302535.2172928/1‑94 (MQ=60)
CGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGG < SRR4302535.1358368/94‑1 (MQ=60)
GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT < SRR4302535.3577637/94‑1 (MQ=60)
GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGA > SRR4302535.204908/1‑94 (MQ=60)
GGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTA < SRR4302535.52268/94‑1 (MQ=60)
GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG > SRR4302535.4283216/1‑94 (MQ=60)
GCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGC < SRR4302535.1549922/94‑1 (MQ=60)
TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC > SRR4302535.3338645/1‑94 (MQ=60)
GGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCA < SRR4302535.1619683/94‑1 (MQ=60)
GCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAG > SRR4302535.2120302/1‑94 (MQ=60)
GCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAG < SRR4302535.3003485/94‑1 (MQ=60)
CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG < SRR4302535.4624451/94‑1 (MQ=60)
CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG < SRR4302535.1253880/94‑1 (MQ=60)
CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG < SRR4302535.2649975/94‑1 (MQ=60)
CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT > SRR4302535.2622391/1‑94 (MQ=60)
GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG > SRR4302535.4242013/1‑94 (MQ=60)
GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG < SRR4302535.2849604/94‑1 (MQ=60)
GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG < SRR4302535.377610/94‑1 (MQ=60)
TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG > SRR4302535.3750658/1‑94 (MQ=60)
TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG < SRR4302535.4496170/94‑1 (MQ=60)
AACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAC > SRR4302535.4196114/1‑94 (MQ=60)
AACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAC < SRR4302535.3976480/94‑1 (MQ=60)
ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT < SRR4302535.785897/94‑1 (MQ=60)
GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG > SRR4302535.3755912/1‑94 (MQ=60)
GGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGC < SRR4302535.4097664/94‑1 (MQ=60)
GGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGC < SRR4302535.1233692/94‑1 (MQ=60)
GCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCT < SRR4302535.313004/94‑1 (MQ=60)
CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG < SRR4302535.2795249/94‑1 (MQ=60)
CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG < SRR4302535.1283319/94‑1 (MQ=60)
CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG > SRR4302535.4034609/1‑94 (MQ=60)
CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG > SRR4302535.785489/1‑94 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG > SRR4302535.1511413/1‑94 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG < SRR4302535.3054065/94‑1 (MQ=60)
GAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAA > SRR4302535.4250809/1‑94 (MQ=60)
AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA > SRR4302535.207071/1‑94 (MQ=60)
AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA < SRR4302535.2752621/94‑1 (MQ=60)
AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAT > SRR4302535.3311186/1‑94 (MQ=60)
AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAT < SRR4302535.4442116/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302535.1100095/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302535.2898003/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302535.2938046/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG > SRR4302535.3229786/1‑94 (MQ=60)
AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG > SRR4302535.1755457/1‑94 (MQ=60)
AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG > SRR4302535.1551212/1‑94 (MQ=60)
GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT < SRR4302535.4401228/94‑1 (MQ=60)
ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG < SRR4302535.1849894/94‑1 (MQ=60)
ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG > SRR4302535.4150196/1‑94 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG > SRR4302535.2750731/1‑94 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG < SRR4302535.736667/94‑1 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG > SRR4302535.2991614/1‑94 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG < SRR4302535.3765867/94‑1 (MQ=60)
GACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG < SRR4302535.2992254/94‑1 (MQ=60)
GACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG < SRR4302535.3674929/94‑1 (MQ=60)
ACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCCTGTCTATGTGACCCAGGGCAGCGCAGGCTGCGACTGGCTGGCAAATCGTGGGG > SRR4302535.4446590/1‑94 (MQ=60)
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CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC > NC_000913/4071811‑4071994
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
