Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,074,827	A→G	Q78R (CAG→CGG)	yihZ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,074,827	0	A	G	99.7%	995.8 / NA	322	Q78R (CAG→CGG)	yihZ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (153/167); total (155/167)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 347 total aligned reads displayed.

GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT  >  NC_000913/4074737‑4074916

gtgtGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGt                                                                                         >  2:1322430/1‑93 (MQ=255)

gtgtGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGt                                                                                         >  2:4015917/1‑93 (MQ=255)

 tgtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGtt                                                                                        >  1:6825438/1‑93 (MQ=255)

 tgtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCCGtt                                                                                        >  1:737263/1‑93 (MQ=255)

   tgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTa                                                                                      >  2:6053292/1‑93 (MQ=255)

   tgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTa                                                                                      >  1:302363/1‑93 (MQ=255)

    gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc                                                                                     <  1:911189/93‑1 (MQ=255)

    gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc                                                                                     <  1:5611709/93‑1 (MQ=255)

     cTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAcc                                                                                    >  1:7753536/1‑93 (MQ=255)

      tCGTCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAccc                                                                                   <  2:3885466/93‑1 (MQ=255)

      tCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAccc                                                                                   <  2:2387075/93‑1 (MQ=255)

       cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCt                                                                                  <  2:1251247/93‑1 (MQ=255)

       cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCCGTTTACCCt                                                                                  >  2:4694027/1‑93 (MQ=255)

        ggCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTc                                                                                 <  1:1021366/93‑1 (MQ=255)

        ggCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGCTTACCCTc                                                                                 >  1:7154829/1‑93 (MQ=255)

          cTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgc                                                                               >  1:5001604/1‑93 (MQ=255)

           tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgcc                                                                              >  1:7934018/1‑93 (MQ=255)

           tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgcc                                                                              >  1:6310781/1‑93 (MQ=255)

           tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgcc                                                                              >  1:5773433/1‑93 (MQ=255)

           tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgcc                                                                              <  2:6423868/93‑1 (MQ=255)

           tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGGTTCCCGGTTTACCCTcgcc                                                                              >  2:7222181/1‑93 (MQ=255)

             ccGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgccgc                                                                            >  1:254245/1‑93 (MQ=255)

              cGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCa                                                                           <  2:7800100/93‑1 (MQ=255)

               gCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAg                                                                          >  2:2022054/1‑93 (MQ=255)

               gCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAg                                                                          >  2:4830276/1‑93 (MQ=255)

               gCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAg                                                                          >  1:3273195/1‑93 (MQ=255)

                ctacTTTATGGATTCCGAAGGCAATATGAATCTCAGCGTGCAACAGTCGGGCGGCAGTGTGCTGGTGGTTTCCCGCTTTACCCTCGCCGCAGa                                                                         <  2:7619198/90‑1 (MQ=255)

                cATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGa                                                                         >  2:1605638/1‑93 (MQ=255)

                 aTCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAt                                                                        >  2:2272548/1‑93 (MQ=255)

                 aTCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAt                                                                        >  2:753320/1‑93 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACCGGCGGGCGGCAGTGTGCTGGTGGTTTCACGGTTTACCATCGCCGCAGAtc                                                                       >  2:6538943/1‑92 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTGCCGGTTTACCCTCGCCGCAGATa                                                                       >  2:4330360/1‑93 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAtt                                                                       >  2:5929651/1‑92 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa                                                                       >  2:2796971/1‑93 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa                                                                       <  1:3386509/93‑1 (MQ=255)

                    tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc                                                                     >  1:7052942/1‑93 (MQ=255)

                       aGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGaa                                                                  <  1:2362413/93‑1 (MQ=255)

                       aGCGAGGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGATGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGaa                                                                  <  2:2851030/93‑1 (MQ=255)

                        gCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTGTACCCTCGCCGCAGATCCCGGAc                                                                 >  1:726289/1‑93 (MQ=255)

                        gCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGCTTCCCGGTTTACCCTCGCCGCAGATACCGAAc                                                                 >  1:1226144/1‑93 (MQ=255)

                         cGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACg                                                                <  1:7881286/93‑1 (MQ=255)

                          gATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGGGGTTTCCCGGTTTACCCTCGCCGCAGATACCGGACgg                                                               >  1:2196336/1‑93 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             >  2:821191/1‑93 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             <  1:3294723/93‑1 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             <  2:6785412/93‑1 (MQ=255)

                                 aaGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGCGGTTTACCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgc                                                        >  1:3852280/1‑93 (MQ=255)

                                   ggCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgcgc                                                      >  1:3757000/1‑93 (MQ=255)

                                     cAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGccc                                                    >  2:5235664/1‑93 (MQ=255)

                                      aaGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGCGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCa                                                   >  2:2882415/1‑93 (MQ=255)

                                       aGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCaa                                                  >  1:6163562/1‑93 (MQ=255)

                                        gATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAg                                                 <  2:1369736/93‑1 (MQ=255)

                                        gATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAg                                                 <  2:4978121/93‑1 (MQ=255)

                                        gATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAg                                                 <  2:4439865/93‑1 (MQ=255)

                                          tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCCAGtt                                               >  2:454526/1‑93 (MQ=255)

                                          tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGtt                                               >  1:2808796/1‑93 (MQ=255)

                                            aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtc                                             <  1:981046/93‑1 (MQ=255)

                                            aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtc                                             >  1:3474985/1‑93 (MQ=255)

                                              tctcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtctc                                           >  2:7265930/1‑93 (MQ=255)

                                                tcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCa                                         >  2:7060015/1‑93 (MQ=255)

                                                 cAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGGTTCTCCaa                                        >  2:91105/1‑93 (MQ=255)

                                                  aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa                                       <  2:1505786/93‑1 (MQ=255)

                                                  aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa                                       <  1:6665278/93‑1 (MQ=255)

                                                  aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa                                       >  1:4572936/1‑93 (MQ=255)

                                                  aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa                                       <  2:6591277/93‑1 (MQ=255)

                                                    cGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAgg                                     <  2:5376689/93‑1 (MQ=255)

                                                       gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc                                  <  2:2553980/93‑1 (MQ=255)

                                                       gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc                                  <  1:473435/93‑1 (MQ=255)

                                                       gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc                                  <  2:2153138/93‑1 (MQ=255)

                                                         aaCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAt                                >  1:20056/1‑93 (MQ=255)

                                                         aaCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAt                                <  2:168447/93‑1 (MQ=255)

                                                          aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc                               >  2:3611072/1‑93 (MQ=255)

                                                          aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc                               >  2:3305283/1‑93 (MQ=255)

                                                          aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc                               <  1:4036727/93‑1 (MQ=255)

                                                           cAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCa                              <  2:2088800/93‑1 (MQ=255)

                                                             ggcgggcgGCAGTGTTCTGTTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc                            <  2:5138291/93‑1 (MQ=255)

                                                             ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcg                            >  1:2284967/1‑92 (MQ=255)

                                                             ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc                            >  2:5971899/1‑93 (MQ=255)

                                                                gggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGa                         <  2:3379776/93‑1 (MQ=255)

                                                                gggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGa                         >  2:581221/1‑93 (MQ=255)

                                                                 ggcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAt                        <  2:5456551/93‑1 (MQ=255)

                                                                 ggcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAt                        >  1:7426148/1‑93 (MQ=255)

                                                                  gcggcAGTTTGCTGGTGGTTTCCCGGTTTGCCCTCGCCGCAGATACCGAACGGGGGATCGTCCCAAGTTTCTCCAAAGGTGCATCACCGGATc                       <  2:3143534/93‑1 (MQ=255)

                                                                  gcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATc                       <  1:1863601/93‑1 (MQ=255)

                                                                   cggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcg                      >  1:5425489/1‑93 (MQ=255)

                                                                    ggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcgc                     <  1:4256455/93‑1 (MQ=255)

                                                                      cAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCgcgc                   >  2:6340237/1‑93 (MQ=255)

                                                                         tgtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCaga                <  1:2934346/93‑1 (MQ=255)

                                                                          gtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCagag               <  1:1770257/93‑1 (MQ=255)

                                                                           tgCTTGGGGTTTCCCGGTTTCCCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAgg              <  2:1463204/93‑1 (MQ=255)

                                                                            gCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGTATCGCGCAGAGGc             <  1:2036482/93‑1 (MQ=255)

                                                                            gCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGc             <  2:7859903/93‑1 (MQ=255)

                                                                            gCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGc             >  1:1474612/1‑93 (MQ=255)

                                                                             cTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCg            <  2:567562/93‑1 (MQ=255)

                                                                               ggtgatTTCCCGGTTTACCCTCGCCGCAGACACCGAGCGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt          <  2:4088751/93‑1 (MQ=255)

                                                                                gtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTta         <  1:1297841/93‑1 (MQ=255)

                                                                                 tggtTTTCCTGTTTCCCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat        <  2:2643185/93‑1 (MQ=255)

                                                                                 tggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat        >  1:7593127/1‑93 (MQ=255)

                                                                                   gtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTatat      >  2:3546740/1‑93 (MQ=255)

                                                                                    tttCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATg     <  2:1930972/93‑1 (MQ=255)

                                                                                     ttCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGa    <  1:1707053/93‑1 (MQ=255)

GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT  >  NC_000913/4074737‑4074916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  >  NC_000913/4074734‑4074920

AGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCG                                                                                               <  SRR4302543.2806698/94‑1 (MQ=60)

AGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCG                                                                                               <  SRR4302543.7537126/94‑1 (MQ=60)

 GCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGG                                                                                              <  SRR4302543.3431269/94‑1 (MQ=60)

  CGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGTGCGGCAGTGTGCTGGTGGTTTCCCGGT                                                                                             >  SRR4302543.2025656/1‑94 (MQ=60)

  CGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGT                                                                                             >  SRR4302543.4001900/1‑94 (MQ=60)

   GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTT                                                                                            >  SRR4302543.7399296/1‑94 (MQ=60)

   GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTT                                                                                            >  SRR4302543.6889866/1‑94 (MQ=60)

   GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCCGTT                                                                                            >  SRR4302543.743862/1‑94 (MQ=60)

     GTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTA                                                                                          >  SRR4302543.305082/1‑94 (MQ=60)

      TGCTCGACTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAC                                                                                         <  SRR4302543.3314482/94‑1 (MQ=60)

       GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACC                                                                                        <  SRR4302543.919197/94‑1 (MQ=60)

       GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACC                                                                                        <  SRR4302543.5662844/94‑1 (MQ=60)

       GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACC                                                                                        <  SRR4302543.3165801/94‑1 (MQ=60)

       GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACC                                                                                        >  SRR4302543.7826740/1‑94 (MQ=60)

       GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGATTTCCCGGTTTACC                                                                                        >  SRR4302543.7826739/1‑94 (MQ=60)

        CTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCC                                                                                       <  SRR4302543.2275524/94‑1 (MQ=60)

        CTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGCCAGTGTGCTGGTGGTTTCCCGGTTTACCC                                                                                       <  SRR4302543.2149557/94‑1 (MQ=60)

          CGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTC                                                                                     >  SRR4302543.2830118/1‑94 (MQ=60)

          CGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTC                                                                                     <  SRR4302543.6333873/94‑1 (MQ=60)

          CGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGCTTACCCTC                                                                                     >  SRR4302543.7224371/1‑94 (MQ=60)

           GGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCG                                                                                    <  SRR4302543.1030403/94‑1 (MQ=60)

            GCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGC                                                                                   >  SRR4302543.5047132/1‑94 (MQ=60)

            GCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGC                                                                                   >  SRR4302543.7185423/1‑94 (MQ=60)

             CTACCTCATCTTTAGCGATGCCGAAGTCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTTCCCTCGCC                                                                                  <  SRR4302543.819364/94‑1 (MQ=60)

             CTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCC                                                                                  >  SRR4302543.3751824/1‑94 (MQ=60)

             CTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCC                                                                                  >  SRR4302543.755900/1‑94 (MQ=60)

             CTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCC                                                                                  >  SRR4302543.5825986/1‑94 (MQ=60)

             CTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCC                                                                                  >  SRR4302543.8008491/1‑94 (MQ=60)

             CTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCC                                                                                  >  SRR4302543.6370135/1‑94 (MQ=60)

              TACCGCATCTTTAGCGATGCTGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCTGTGTGCTGGTGGTTTCCCGGTTTATCCTCGCCG                                                                                 >  SRR4302543.7091827/1‑94 (MQ=60)

               ACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGC                                                                                >  SRR4302543.256466/1‑94 (MQ=60)

                 CGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAG                                                                              >  SRR4302543.2875019/1‑94 (MQ=60)

                 CGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAG                                                                              >  SRR4302543.3302764/1‑94 (MQ=60)

                   CATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAT                                                                            >  SRR4302543.3010869/1‑94 (MQ=60)

                   CATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAT                                                                            >  SRR4302543.3797742/1‑94 (MQ=60)

                     TCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAC                                                                          <  SRR4302543.2064779/94‑1 (MQ=60)

                     TCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAC                                                                          <  SRR4302543.3416872/94‑1 (MQ=60)

                      CTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACC                                                                         >  SRR4302543.7121378/1‑94 (MQ=60)

                       TTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCG                                                                        >  SRR4302543.2312629/1‑94 (MQ=60)

                        TTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGA                                                                       <  SRR4302543.3348978/94‑1 (MQ=60)

                         TAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAA                                                                      >  SRR4302543.5863549/1‑94 (MQ=60)

                         TAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAA                                                                      >  SRR4302543.4920735/1‑94 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     <  SRR4302543.2383836/94‑1 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     <  SRR4302543.969436/94‑1 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     >  SRR4302543.7563171/1‑94 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     <  SRR4302543.5571025/94‑1 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     >  SRR4302543.732820/1‑94 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTGTACCCTCGCCGCAGATCCCGGAC                                                                     >  SRR4302543.732819/1‑94 (MQ=60)

                          AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGCTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     >  SRR4302543.1237161/1‑94 (MQ=60)

                          AGCGATGACGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC                                                                     <  SRR4302543.3035245/94‑1 (MQ=60)

                            CGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGG                                                                   <  SRR4302543.7955453/94‑1 (MQ=60)

                            CGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGGGGTTTCCCGGTTTACCCTCGCCGCAGATACCGGACGG                                                                   >  SRR4302543.2216079/1‑94 (MQ=60)

                             GATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGG                                                                  >  SRR4302543.943887/1‑94 (MQ=60)

                              ATGCCGAAGGCAAGATAAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGG                                                                 <  SRR4302543.6058448/94‑1 (MQ=60)

                               TGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGG                                                                <  SRR4302543.3324448/94‑1 (MQ=60)

                                GCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGA                                                               >  SRR4302543.1992798/1‑94 (MQ=60)

                                 CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAT                                                              <  SRR4302543.2375068/94‑1 (MQ=60)

                                 CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAT                                                              >  SRR4302543.1407028/1‑94 (MQ=60)

                                 CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAT                                                              >  SRR4302543.7453972/1‑94 (MQ=60)

                                 CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAT                                                              <  SRR4302543.1052607/94‑1 (MQ=60)

                                 CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGAGGGAT                                                              >  SRR4302543.247339/1‑94 (MQ=60)

                                  CGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATG                                                             <  SRR4302543.7134153/94‑1 (MQ=60)

                                  CGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGCGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATG                                                             >  SRR4302543.7657460/1‑94 (MQ=60)

                                   GAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGC                                                            <  SRR4302543.3953530/94‑1 (MQ=60)

                                   GAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGCGGTTTACCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGC                                                            >  SRR4302543.3886318/1‑94 (MQ=60)

                                    AAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTCCCCTCGCCGCAGATACCGAACGGGGGATGCG                                                           <  SRR4302543.4826112/94‑1 (MQ=60)

                                    AAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCG                                                           <  SRR4302543.436873/94‑1 (MQ=60)

                                    AAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCG                                                           <  SRR4302543.3651973/94‑1 (MQ=60)

                                    AAGGCAAGATGAATCTCAACGGGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCG                                                           <  SRR4302543.3020784/94‑1 (MQ=60)

                                     AGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGC                                                          >  SRR4302543.7299687/1‑94 (MQ=60)

                                     AGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGC                                                          >  SRR4302543.3790058/1‑94 (MQ=60)

                                       GCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGGGCCC                                                        >  SRR4302543.1776175/1‑94 (MQ=60)

                                       GCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCC                                                        >  SRR4302543.5780547/1‑94 (MQ=60)

                                        CAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGAGGATGCGCCCA                                                       >  SRR4302543.1013745/1‑94 (MQ=60)

                                         AAGATGAATCTCAACGTGCAGCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAA                                                      <  SRR4302543.5413037/94‑1 (MQ=60)

                                         AAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAA                                                      >  SRR4302543.6221892/1‑94 (MQ=60)

                                         AAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAA                                                      >  SRR4302543.5266178/1‑94 (MQ=60)

                                          AGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAG                                                     <  SRR4302543.6460220/94‑1 (MQ=60)

                                           GATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGT                                                    <  SRR4302543.6535924/94‑1 (MQ=60)

                                            ATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTT                                                   <  SRR4302543.3755014/94‑1 (MQ=60)

                                            ATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTT                                                   <  SRR4302543.6673459/94‑1 (MQ=60)

                                            ATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTT                                                   >  SRR4302543.2834507/1‑94 (MQ=60)

                                            ATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTT                                                   >  SRR4302543.2473687/1‑94 (MQ=60)

                                            ATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTT                                                   <  SRR4302543.2260735/94‑1 (MQ=60)

                                             TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT                                                  <  SRR4302543.2827673/94‑1 (MQ=60)

                                             TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT                                                  <  SRR4302543.7470461/94‑1 (MQ=60)

                                             TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT                                                  >  SRR4302543.469180/1‑94 (MQ=60)

                                             TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT                                                  >  SRR4302543.4644526/1‑94 (MQ=60)

                                             TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT                                                  <  SRR4302543.4840087/94‑1 (MQ=60)

                                              GAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTC                                                 >  SRR4302543.3506111/1‑94 (MQ=60)

                                              GAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTC                                                 >  SRR4302543.1373591/1‑94 (MQ=60)

                                               AATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCT                                                <  SRR4302543.7960497/94‑1 (MQ=60)

                                               AATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCT                                                <  SRR4302543.793933/94‑1 (MQ=60)

                                               AATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCT                                                <  SRR4302543.989705/94‑1 (MQ=60)

                                                 TCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCC                                              >  SRR4302543.3865814/1‑94 (MQ=60)

                                                  CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGCACGGGGGATGCGCCCAAGTTTCTCCA                                             >  SRR4302543.6782719/1‑94 (MQ=60)

                                                  CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCA                                             <  SRR4302543.1887302/94‑1 (MQ=60)

                                                    CAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAA                                           >  SRR4302543.4614519/1‑94 (MQ=60)

                                                     AACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAG                                          <  SRR4302543.6728204/94‑1 (MQ=60)

                                                        GTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTG                                       >  SRR4302543.7966232/1‑94 (MQ=60)

                                                         TGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGC                                      <  SRR4302543.1001194/94‑1 (MQ=60)

                                                         TGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGC                                      <  SRR4302543.896690/94‑1 (MQ=60)

                                                         TGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGC                                      >  SRR4302543.5611244/1‑94 (MQ=60)

                                                          GCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCA                                     <  SRR4302543.477819/94‑1 (MQ=60)

                                                           CAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAT                                    <  SRR4302543.1217720/94‑1 (MQ=60)

                                                           CAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAT                                    >  SRR4302543.20242/1‑94 (MQ=60)

                                                           CAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAT                                    >  SRR4302543.872541/1‑94 (MQ=60)

                                                             ACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCA                                  <  SRR4302543.4072844/94‑1 (MQ=60)

                                                             ACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCA                                  <  SRR4302543.7053706/94‑1 (MQ=60)

                                                              CAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAC                                 <  SRR4302543.4360539/94‑1 (MQ=60)

                                                               AGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACG                                >  SRR4302543.2305839/1‑94 (MQ=60)

                                                               AGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC                                >  SRR4302543.5918957/1‑94 (MQ=60)

                                                               AGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC                                <  SRR4302543.3311028/94‑1 (MQ=60)

                                                               AGGCAGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCTGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC                                <  SRR4302543.7441172/94‑1 (MQ=60)

                                                                GGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCG                               <  SRR4302543.3407693/94‑1 (MQ=60)

                                                                 GCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGG                              <  SRR4302543.7159046/94‑1 (MQ=60)

                                                                 GCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGG                              <  SRR4302543.7281714/94‑1 (MQ=60)

                                                                  CGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGA                             <  SRR4302543.2376056/94‑1 (MQ=60)

                                                                  CGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGA                             >  SRR4302543.3414672/1‑94 (MQ=60)

                                                                   GGGCGGCAGTGTGCTGGTGTGTTCCCGGTTTCCCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAT                            <  SRR4302543.4273892/94‑1 (MQ=60)

                                                                   GGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAT                            >  SRR4302543.7497360/1‑94 (MQ=60)

                                                                    GGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATC                           <  SRR4302543.3443339/94‑1 (MQ=60)

                                                                     GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG                          >  SRR4302543.5474802/1‑94 (MQ=60)

                                                                     GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG                          <  SRR4302543.1748242/94‑1 (MQ=60)

                                                                     GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG                          <  SRR4302543.2205747/94‑1 (MQ=60)

                                                                     GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG                          <  SRR4302543.1880343/94‑1 (MQ=60)

                                                                     GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG                          <  SRR4302543.1811467/94‑1 (MQ=60)

                                                                       GGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCG                        <  SRR4302543.4295099/94‑1 (MQ=60)

                                                                       GGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCG                        >  SRR4302543.141190/1‑94 (MQ=60)

                                                                         CAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCA                      <  SRR4302543.1950204/94‑1 (MQ=60)

                                                                          CGTGTGCTGGTTGTTTCCCGGTTTACCCTCGCCGCAGATTCCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAG                     <  SRR4302543.6800778/94‑1 (MQ=60)

                                                                          AGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAG                     <  SRR4302543.2877335/94‑1 (MQ=60)

                                                                           GTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGA                    >  SRR4302543.1773747/1‑94 (MQ=60)

                                                                           GTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGA                    >  SRR4302543.5776205/1‑94 (MQ=60)

                                                                            TGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAG                   <  SRR4302543.2960985/94‑1 (MQ=60)

                                                                            TGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAG                   <  SRR4302543.1708876/94‑1 (MQ=60)

                                                                             GTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGG                  <  SRR4302543.1786087/94‑1 (MQ=60)

                                                                             GTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGG                  >  SRR4302543.3907095/1‑94 (MQ=60)

                                                                              TGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGC                 >  SRR4302543.1487896/1‑94 (MQ=60)

                                                                               GCTGGTGGTTTCGCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCG                <  SRR4302543.2575497/94‑1 (MQ=60)

                                                                               GCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGTATCGCGCAGAGGCG                <  SRR4302543.2054761/94‑1 (MQ=60)

                                                                               GCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCG                <  SRR4302543.1529376/94‑1 (MQ=60)

                                                                               GCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCG                <  SRR4302543.4306819/94‑1 (MQ=60)

                                                                               GCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCG                <  SRR4302543.7893693/94‑1 (MQ=60)

                                                                               GCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCG                <  SRR4302543.1273/94‑1 (MQ=60)

                                                                                 TGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTT              >  SRR4302543.6351635/1‑94 (MQ=60)

                                                                                  GGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTA             >  SRR4302543.3499925/1‑94 (MQ=60)

                                                                                   GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT            <  SRR4302543.793243/94‑1 (MQ=60)

                                                                                   GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT            <  SRR4302543.5650131/94‑1 (MQ=60)

                                                                                   GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT            <  SRR4302543.1309377/94‑1 (MQ=60)

                                                                                   GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT            <  SRR4302543.7761060/94‑1 (MQ=60)

                                                                                   GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT            >  SRR4302543.7665267/1‑94 (MQ=60)

                                                                                    TGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATA           <  SRR4302543.4211938/94‑1 (MQ=60)

                                                                                     GGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATAT          <  SRR4302543.1791138/94‑1 (MQ=60)

                                                                                     GGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATAT          >  SRR4302543.2030623/1‑94 (MQ=60)

                                                                                     GGTTGCCCGGTTTCCCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATAT          <  SRR4302543.3052778/94‑1 (MQ=60)

                                                                                      GTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGcccttatata         >  SRR4302543.1266337/1‑84 (MQ=60)

                                                                                        TTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGAC       <  SRR4302543.1722335/94‑1 (MQ=60)

                                                                                          CCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTA     >  SRR4302543.7708599/1‑94 (MQ=60)

                                                                                          CCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTA     >  SRR4302543.3395980/1‑94 (MQ=60)

                                                                                          CCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTA     >  SRR4302543.5412597/1‑94 (MQ=60)

                                                                                           CCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTAT    <  SRR4302543.5936359/94‑1 (MQ=60)

                                                                                           CCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTAT    <  SRR4302543.5936358/94‑1 (MQ=60)

                                                                                           CCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGGACATCACCGGATCGCGCAGACGCGCTATATGACTAT    >  SRR4302543.7692100/1‑94 (MQ=60)

                                                                                            CGGTTTACCCTCGCCGCAGATACCGAACGGGGGATTCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATT   <  SRR4302543.5900149/94‑1 (MQ=60)

                                                                                            CGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATT   <  SRR4302543.3837108/94‑1 (MQ=60)

                                                                                             GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  >  SRR4302543.6663544/1‑94 (MQ=60)

                                                                                             GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  >  SRR4302543.2701683/1‑94 (MQ=60)

                                                                                             GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  <  SRR4302543.759991/94‑1 (MQ=60)

                                                                                             GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  <  SRR4302543.4791047/94‑1 (MQ=60)

AGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT  >  NC_000913/4074734‑4074920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`