Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,074,827 |
A→G |
Q78R (CAG→CGG) |
yihZ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,074,827 | 0 | A | G | 100.0%
| 676.0
/ NA
| 213 | Q78R (CAG→CGG) | yihZ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (99/114); total (99/114) |
Only 100 of 230 total aligned reads displayed.
GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT > NC_000913/4074737‑4074916
|
tgtgCTCGGTTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGtt < 2:2506197/93‑1 (MQ=255)
tgtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGtt < 1:412389/93‑1 (MQ=255)
tgtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGtt < 2:1261049/93‑1 (MQ=255)
tgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTa > 2:3098028/1‑93 (MQ=255)
gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc > 1:1009365/1‑93 (MQ=255)
gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc > 1:3044297/1‑93 (MQ=255)
gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc > 2:3669160/1‑93 (MQ=255)
gCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAc < 2:2302844/93‑1 (MQ=255)
cTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAcc < 1:4314259/93‑1 (MQ=255)
cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCGGGGTGCCGGTGGTTTCCCCGGTTACCCt > 1:1707369/1‑93 (MQ=255)
cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCt < 2:1377635/93‑1 (MQ=255)
ggCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTc < 1:3411960/93‑1 (MQ=255)
gCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcg > 1:400336/1‑93 (MQ=255)
tACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgcc > 2:1595469/1‑93 (MQ=255)
aCCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgccg < 2:3787218/93‑1 (MQ=255)
cGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCa > 2:61706/1‑93 (MQ=255)
gCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGCGGTTTCCCGGTTTACCCTCGCCGCAg > 2:2434816/1‑93 (MQ=255)
gCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCACTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAg > 1:2330476/1‑93 (MQ=255)
cATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGa > 1:4224142/1‑93 (MQ=255)
cATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGa < 1:3461253/93‑1 (MQ=255)
aTCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAt > 1:1854014/1‑93 (MQ=255)
aTCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAt > 2:1553599/1‑93 (MQ=255)
tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa > 1:2403243/1‑93 (MQ=255)
tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa > 2:123686/1‑93 (MQ=255)
tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa < 1:3560630/93‑1 (MQ=255)
tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa < 1:339592/93‑1 (MQ=255)
tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc > 2:519853/1‑93 (MQ=255)
tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc > 2:878950/1‑93 (MQ=255)
tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc < 1:2682819/93‑1 (MQ=255)
tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc > 1:2953220/1‑93 (MQ=255)
ttAGCTATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCg > 1:4612236/1‑93 (MQ=255)
tAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGa < 2:588565/93‑1 (MQ=255)
gCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAc > 2:38476/1‑93 (MQ=255)
gCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAc < 2:1492659/93‑1 (MQ=255)
gCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAc > 1:3879562/1‑93 (MQ=255)
cGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACg < 1:191982/93‑1 (MQ=255)
cGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACg < 1:4660523/93‑1 (MQ=255)
gATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCCGATACCGAACgg > 2:4537010/1‑93 (MQ=255)
gATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgg < 1:2231172/93‑1 (MQ=255)
aTGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACggg < 2:2774115/93‑1 (MQ=255)
aTGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACggg < 1:1248654/93‑1 (MQ=255)
tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg < 1:2481367/93‑1 (MQ=255)
tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg < 2:1023740/93‑1 (MQ=255)
cGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAt < 2:1188959/93‑1 (MQ=255)
ggCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgcgc < 1:1922783/93‑1 (MQ=255)
cAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGccc > 1:1522061/1‑93 (MQ=255)
cAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGccc < 1:938255/93‑1 (MQ=255)
aGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCaa < 1:4588662/93‑1 (MQ=255)
aGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCaa > 2:3235663/1‑93 (MQ=255)
aGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCaa > 2:4110755/1‑93 (MQ=255)
gATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAg > 2:354517/1‑93 (MQ=255)
tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGtt > 2:1861225/1‑93 (MQ=255)
tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGtt > 2:489163/1‑93 (MQ=255)
aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGCTACCGAACGGGGGATGGGCCCAAGTTtc > 2:1460000/1‑93 (MQ=255)
aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGGTGCGCCCAAGTTtc > 1:1651391/1‑93 (MQ=255)
aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtc > 2:3872513/1‑93 (MQ=255)
aTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtct < 2:3015539/93‑1 (MQ=255)
aTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtct > 2:1949102/1‑93 (MQ=255)
ctcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTcc < 1:4389800/93‑1 (MQ=255)
ctcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTcc > 1:3204997/1‑93 (MQ=255)
tcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCa > 1:4523728/1‑93 (MQ=255)
tcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCa > 2:289540/1‑93 (MQ=255)
aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa > 1:1039784/1‑93 (MQ=255)
aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa < 2:1646609/93‑1 (MQ=255)
aaCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCaaa > 2:1339663/1‑93 (MQ=255)
aCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAg < 2:180690/93‑1 (MQ=255)
aCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAg > 1:586790/1‑93 (MQ=255)
aCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGGTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAg > 1:445393/1‑93 (MQ=255)
cGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAgg < 2:2573022/93‑1 (MQ=255)
gTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGt < 2:16967/93‑1 (MQ=255)
gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc < 2:330161/93‑1 (MQ=255)
aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc < 1:3269567/93‑1 (MQ=255)
aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc > 1:2993158/1‑93 (MQ=255)
cAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCa < 2:4669078/93‑1 (MQ=255)
aGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAc > 1:3783642/1‑93 (MQ=255)
ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGCTACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc < 2:213920/93‑1 (MQ=255)
ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc > 2:2625620/1‑93 (MQ=255)
ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc > 1:1773956/1‑93 (MQ=255)
cgggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCgg < 2:2721711/93‑1 (MQ=255)
ggcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAt > 2:3270457/1‑93 (MQ=255)
cggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcg < 2:1519433/93‑1 (MQ=255)
gcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcgcg > 1:212179/1‑93 (MQ=255)
gcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcgcg > 1:56586/1‑93 (MQ=255)
cAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCgcgc > 1:1574159/1‑93 (MQ=255)
aGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCa < 2:3685364/93‑1 (MQ=255)
tgCTGGGGGTTTCCTGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAGGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAgg < 2:2055645/93‑1 (MQ=255)
cTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAACGGTGCATCACCGGATCGCGCAGAGGCg > 2:773306/1‑93 (MQ=255)
tggtggTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGt > 2:2674735/1‑93 (MQ=255)
ggtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt < 2:34732/93‑1 (MQ=255)
ggtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt < 2:295860/93‑1 (MQ=255)
ggtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt < 1:1354133/93‑1 (MQ=255)
ggtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt < 1:1990299/93‑1 (MQ=255)
gtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTta < 2:3949590/93‑1 (MQ=255)
gtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTta < 2:65593/93‑1 (MQ=255)
tggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCACGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat < 1:2510142/93‑1 (MQ=255)
tggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat < 2:210954/93‑1 (MQ=255)
tggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat > 1:3083048/1‑93 (MQ=255)
tggtCTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat < 1:2838589/93‑1 (MQ=255)
tttCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATg > 1:72541/1‑93 (MQ=255)
tCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGAc < 1:2005954/93‑1 (MQ=255)
|
GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT > NC_000913/4074737‑4074916
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT > NC_000913/4074736‑4074920
|
CGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGT > SRR4302535.3451337/1‑94 (MQ=60)
GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTTCCGGTT > SRR4302535.1632412/1‑94 (MQ=60)
TGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTT < SRR4302535.415286/94‑1 (MQ=60)
GTGCTCGGGTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTA < SRR4302535.894796/94‑1 (MQ=60)
TGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAC > SRR4302535.1016536/1‑94 (MQ=60)
TGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAC > SRR4302535.3033299/1‑94 (MQ=60)
TGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAC > SRR4302535.3065622/1‑94 (MQ=60)
GCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACC > SRR4302535.4410981/1‑94 (MQ=60)
CTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCC < SRR4302535.4343770/94‑1 (MQ=60)
TCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCGGGGTGCCGGTGGTTTCCCCGGTTACCCT > SRR4302535.1719713/1‑94 (MQ=60)
TCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCT > SRR4302535.3037369/1‑94 (MQ=60)
TCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCT < SRR4302535.3106963/94‑1 (MQ=60)
GGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCG > SRR4302535.403140/1‑94 (MQ=60)
GGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCG < SRR4302535.3435700/94‑1 (MQ=60)
CCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCA > SRR4302535.3074324/1‑94 (MQ=60)
CCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCA > SRR4302535.2510846/1‑94 (MQ=60)
CGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAG > SRR4302535.2069922/1‑94 (MQ=60)
CGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCACTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAG > SRR4302535.2347144/1‑94 (MQ=60)
GCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGA > SRR4302535.4253045/1‑94 (MQ=60)
GCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGA > SRR4302535.3497259/1‑94 (MQ=60)
CATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAT < SRR4302535.3485319/94‑1 (MQ=60)
CATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAT > SRR4302535.1867369/1‑94 (MQ=60)
CATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGAA > SRR4302535.3708212/1‑94 (MQ=60)
ATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATA > SRR4302535.2420531/1‑94 (MQ=60)
TCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACATGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAC > SRR4302535.3325713/1‑94 (MQ=60)
TCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAC < SRR4302535.3585318/94‑1 (MQ=60)
TCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAC < SRR4302535.341942/94‑1 (MQ=60)
CTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCCGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACC > SRR4302535.1279850/1‑94 (MQ=60)
CTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACC > SRR4302535.2973968/1‑94 (MQ=60)
TTTAGCTATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCG > SRR4302535.4643573/1‑94 (MQ=60)
TTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCG < SRR4302535.2702008/94‑1 (MQ=60)
AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC > SRR4302535.3906193/1‑94 (MQ=60)
AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC < SRR4302535.1830326/94‑1 (MQ=60)
AGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAAC < SRR4302535.1904566/94‑1 (MQ=60)
GCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACG < SRR4302535.1940512/94‑1 (MQ=60)
CGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGG < SRR4302535.4692045/94‑1 (MQ=60)
CGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGG < SRR4302535.193307/94‑1 (MQ=60)
CGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGG > SRR4302535.2899954/1‑94 (MQ=60)
CGATGCCGAAAGCAAGATGAATCTCAACGTGCAACAGGCTGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGG > SRR4302535.4713724/1‑94 (MQ=60)
GATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGG < SRR4302535.2247037/94‑1 (MQ=60)
GATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGG > SRR4302535.2464780/1‑94 (MQ=60)
ATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGG < SRR4302535.1257565/94‑1 (MQ=60)
TGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGG < SRR4302535.2499259/94‑1 (MQ=60)
CCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAT < SRR4302535.143857/94‑1 (MQ=60)
CGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATG < SRR4302535.4092340/94‑1 (MQ=60)
GAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGC < SRR4302535.2177351/94‑1 (MQ=60)
AAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCG > SRR4302535.193476/1‑94 (MQ=60)
GGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCC < SRR4302535.1936643/94‑1 (MQ=60)
GCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCC > SRR4302535.1533024/1‑94 (MQ=60)
CAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCA < SRR4302535.3420445/94‑1 (MQ=60)
CAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCA < SRR4302535.191344/94‑1 (MQ=60)
CAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCA > SRR4302535.4553484/1‑94 (MQ=60)
CAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCA < SRR4302535.944901/94‑1 (MQ=60)
AAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAC > SRR4302535.2370103/1‑94 (MQ=60)
AGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAG < SRR4302535.1043389/94‑1 (MQ=60)
AGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAG < SRR4302535.4619903/94‑1 (MQ=60)
AGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAG < SRR4302535.426337/94‑1 (MQ=60)
TGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTT < SRR4302535.2319548/94‑1 (MQ=60)
GAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGGTGCGCCCAAGTTTC > SRR4302535.1663333/1‑94 (MQ=60)
TCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCC > SRR4302535.3227194/1‑94 (MQ=60)
CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCA < SRR4302535.4419834/94‑1 (MQ=60)
CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCA > SRR4302535.4554720/1‑94 (MQ=60)
CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCA < SRR4302535.2573606/94‑1 (MQ=60)
CTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCA > SRR4302535.4335025/1‑94 (MQ=60)
TCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCACGTTTCTCCAA > SRR4302535.3263026/1‑94 (MQ=60)
CAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAA > SRR4302535.4194494/1‑94 (MQ=60)
CAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAA > SRR4302535.1047161/1‑94 (MQ=60)
AACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAG > SRR4302535.590901/1‑94 (MQ=60)
AACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGGTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAG > SRR4302535.448508/1‑94 (MQ=60)
CGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGG > SRR4302535.1375844/1‑94 (MQ=60)
AACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATC > SRR4302535.3014146/1‑94 (MQ=60)
ACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCA < SRR4302535.3292279/94‑1 (MQ=60)
ACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCA < SRR4302535.1770998/94‑1 (MQ=60)
ACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGGTTACCCTCGCCGCAGATACCGAACGGGGGATGCGACCAAGTTTCTCCAAAGGTGCATCC > SRR4302535.2770309/1‑94 (MQ=60)
CAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAC > SRR4302535.157582/1‑94 (MQ=60)
CAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAC > SRR4302535.3809749/1‑94 (MQ=60)
CAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAC > SRR4302535.2991734/1‑94 (MQ=60)
AGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC > SRR4302535.970182/1‑94 (MQ=60)
AGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC > SRR4302535.1786809/1‑94 (MQ=60)
AGGCGGGCGGCAGTGTGCTGGTCGTTGCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACC < SRR4302535.4465742/94‑1 (MQ=60)
GGCGGGCGGCAGTGTGCTGGTGGTTTCCGGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCG < SRR4302535.4540925/94‑1 (MQ=60)
GGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCG < SRR4302535.4602715/94‑1 (MQ=60)
CGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGA < SRR4302535.4028993/94‑1 (MQ=60)
GGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATC < SRR4302535.1706262/94‑1 (MQ=60)
GGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATC < SRR4302535.1718025/94‑1 (MQ=60)
GCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCG < SRR4302535.585057/94‑1 (MQ=60)
GGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCG > SRR4302535.56994/1‑94 (MQ=60)
GGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCG > SRR4302535.213637/1‑94 (MQ=60)
GCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGC > SRR4302535.1585524/1‑94 (MQ=60)
AGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGGCCAAGTTTCTCCAAAGGTGCATCACCGGCTCGCGCAC > SRR4302535.1139192/1‑94 (MQ=60)
GTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGA > SRR4302535.4673398/1‑94 (MQ=60)
TGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGC < SRR4302535.923129/94‑1 (MQ=60)
TGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTT > SRR4302535.3458787/1‑94 (MQ=60)
TGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTT > SRR4302535.4640622/1‑94 (MQ=60)
GGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTA < SRR4302535.1363819/94‑1 (MQ=60)
GGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTA < SRR4302535.2004630/94‑1 (MQ=60)
GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT > SRR4302535.2572249/1‑94 (MQ=60)
GTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTAT > SRR4302535.3104532/1‑94 (MQ=60)
TGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCACGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATA < SRR4302535.2528236/94‑1 (MQ=60)
TGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATA > SRR4302535.3976071/1‑94 (MQ=60)
TGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATA > SRR4302535.3851174/1‑94 (MQ=60)
TGGTCTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATA < SRR4302535.2858727/94‑1 (MQ=60)
GGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATAT < SRR4302535.20633/94‑1 (MQ=60)
GGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATAT < SRR4302535.712343/94‑1 (MQ=60)
GTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATG > SRR4302535.73069/1‑94 (MQ=60)
TTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGA < SRR4302535.327441/94‑1 (MQ=60)
TTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGAC < SRR4302535.2009701/94‑1 (MQ=60)
TCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT < SRR4302535.2020404/94‑1 (MQ=60)
TCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT < SRR4302535.2388223/94‑1 (MQ=60)
CCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTA < SRR4302535.559317/94‑1 (MQ=60)
CCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTAT > SRR4302535.3508003/1‑94 (MQ=60)
CCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTAT > SRR4302535.378180/1‑94 (MQ=60)
GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT > SRR4302535.4082039/1‑94 (MQ=60)
GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT > SRR4302535.454394/1‑94 (MQ=60)
GGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT > SRR4302535.4272327/1‑94 (MQ=60)
|
CGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTT > NC_000913/4074736‑4074920
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
