Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,071,901	G→A	A197T (GCC→ACC)	yihV →	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,071,901	0	G	A	100.0%	1404.7 / NA	393	A197T (GCC→ACC)	yihV	putative kinase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (214/179); total (214/179)

Only 100 of 402 total aligned reads displayed.

CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG  >  NC_000913/4071811‑4071992

ccgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAcc                                                                                           >  2:3310464/1‑93 (MQ=255)

 cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa                                                                                          >  1:1165689/1‑93 (MQ=255)

  gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg                                                                                         >  1:7650006/1‑93 (MQ=255)

  gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg                                                                                         >  1:4446170/1‑93 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                       >  2:1881294/1‑93 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                       >  2:5767797/1‑93 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                       <  2:7017048/93‑1 (MQ=255)

     ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc                                                                                      >  1:6508834/1‑93 (MQ=255)

     ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc                                                                                      >  1:3300347/1‑93 (MQ=255)

       atatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcgc                                                                                    <  2:2609564/93‑1 (MQ=255)

       atatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcgc                                                                                    <  1:3394130/93‑1 (MQ=255)

        tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt                                                                                   >  2:7628424/1‑93 (MQ=255)

        tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGAGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt                                                                                   >  2:5140912/1‑93 (MQ=255)

        tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACAGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt                                                                                   >  2:6028344/1‑93 (MQ=255)

         atCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTa                                                                                  >  1:5327484/1‑93 (MQ=255)

          tCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaa                                                                                 >  2:63272/1‑93 (MQ=255)

          tCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaa                                                                                 <  2:2781443/93‑1 (MQ=255)

          tCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaa                                                                                 >  1:1831991/1‑93 (MQ=255)

            aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa                                                                               <  2:1556671/93‑1 (MQ=255)

            aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa                                                                               <  1:5832909/93‑1 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaaa                                                                              >  2:6561285/1‑92 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                              >  1:2584866/1‑93 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                              <  2:4210765/93‑1 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                              >  1:4989232/1‑93 (MQ=255)

              tGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACa                                                                             <  1:6831568/93‑1 (MQ=255)

               gAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAg                                                                            <  1:4691953/93‑1 (MQ=255)

               gAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAg                                                                            <  2:4920425/93‑1 (MQ=255)

                aGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAgg                                                                           >  2:6164552/1‑93 (MQ=255)

                 gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc                                                                          <  2:2026490/93‑1 (MQ=255)

                 gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc                                                                          <  1:2742747/93‑1 (MQ=255)

                  cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca                                                                         <  1:3649185/93‑1 (MQ=255)

                   tggtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCCGTGCGCTAAAACAGGcac                                                                        >  1:2662810/1‑93 (MQ=255)

                       ggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAc                                                                    <  2:3663477/93‑1 (MQ=255)

                        gCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACg                                                                   >  1:4583553/1‑93 (MQ=255)

                         cATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGc                                                                  <  2:6729434/93‑1 (MQ=255)

                          aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt                                                                 >  1:3972022/1‑93 (MQ=255)

                           ttAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc                                                                >  1:3075333/1‑93 (MQ=255)

                            tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca                                                               >  1:7522709/1‑93 (MQ=255)

                            tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca                                                               >  1:3599898/1‑93 (MQ=255)

                               gCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaa                                                            <  1:4373795/93‑1 (MQ=255)

                               gCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaa                                                            <  1:5460506/93‑1 (MQ=255)

                                cGATCACGCCGCCTGTTCAGAGCGGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGTCACAAACGCTCACaaa                                                           <  2:4240416/93‑1 (MQ=255)

                                 gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt                                                          <  2:7225652/93‑1 (MQ=255)

                                 gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt                                                          >  2:410282/1‑93 (MQ=255)

                                  aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg                                                         >  1:1347192/1‑93 (MQ=255)

                                  aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg                                                         >  2:5625994/1‑93 (MQ=255)

                                   tCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATgg                                                        >  2:3117728/1‑93 (MQ=255)

                                    cACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGt                                                       <  1:3172897/93‑1 (MQ=255)

                                      cgcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCa                                                     <  2:6892036/93‑1 (MQ=255)

                                      cgcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCa                                                     <  2:1321841/93‑1 (MQ=255)

                                       gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt                                                    >  1:5211806/1‑93 (MQ=255)

                                         ggCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGt                                                  <  1:5690746/93‑1 (MQ=255)

                                         ggCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGt                                                  >  1:3884640/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 >  2:7443115/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 >  1:853559/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 >  1:414124/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 >  1:4279079/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 <  1:5160097/93‑1 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                                 >  2:4798564/1‑93 (MQ=255)

                                            cTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTa                                               <  1:169953/93‑1 (MQ=255)

                                             ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt                                              >  2:1027157/1‑93 (MQ=255)

                                              tttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtg                                             >  1:1310857/1‑93 (MQ=255)

                                               ttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtgt                                            <  1:6670065/93‑1 (MQ=255)

                                               ttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtgt                                            >  2:3970824/1‑93 (MQ=255)

                                                 cAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGa                                          <  1:6524685/93‑1 (MQ=255)

                                                   gAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAcc                                        >  1:7800523/1‑93 (MQ=255)

                                                   gAACCGGGCCTGGCGCGCTTAACGGGCGTGAAAGAGCTGACCAGTGCGCTAACACAGGCACCAACGCTTACAAATCGACCTGTCTATATGAcc                                        >  2:4631540/1‑93 (MQ=255)

                                                    aaCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAccc                                       <  1:938972/93‑1 (MQ=255)

                                                     aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCa                                      <  1:505805/93‑1 (MQ=255)

                                                     aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCa                                      >  2:3820896/1‑93 (MQ=255)

                                                      ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg                                     <  1:219767/93‑1 (MQ=255)

                                                       cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg                                    >  1:801719/1‑93 (MQ=255)

                                                       cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg                                    >  1:2861968/1‑93 (MQ=255)

                                                       cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg                                    <  1:598262/93‑1 (MQ=255)

                                                          gTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTGACAAATGGTCATGTCTATGTGACCCAGGGTa                                 <  2:668053/93‑1 (MQ=255)

                                                             tGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcg                              >  1:6988122/1‑93 (MQ=255)

                                                              ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc                             <  2:7257232/93‑1 (MQ=255)

                                                              ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc                             >  2:1744951/1‑93 (MQ=255)

                                                              ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc                             <  2:6245189/93‑1 (MQ=255)

                                                               gcgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCa                            <  2:7751005/93‑1 (MQ=255)

                                                                 gcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAgg                          >  2:2836276/1‑93 (MQ=255)

                                                                   gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCt                        >  2:3483802/1‑93 (MQ=255)

                                                                   gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCt                        >  1:7384184/1‑93 (MQ=255)

                                                                   gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGCCTATGTGACCCAGGGTAGCGCAGGCt                        >  2:241152/1‑93 (MQ=255)

                                                                    cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg                       >  2:3192551/1‑93 (MQ=255)

                                                                     ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTgg                      >  1:1020131/1‑92 (MQ=255)

                                                                     ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc                      >  1:7293883/1‑93 (MQ=255)

                                                                     ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc                      >  2:4432878/1‑93 (MQ=255)

                                                                     ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc                      >  1:2495413/1‑93 (MQ=255)

                                                                      tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg                     >  1:1972218/1‑93 (MQ=255)

                                                                      tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg                     >  2:4390673/1‑93 (MQ=255)

                                                                      tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg                     >  2:7896381/1‑93 (MQ=255)

                                                                       aaCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGa                    >  1:143181/1‑93 (MQ=255)

                                                                        aCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAc                   <  2:2969322/93‑1 (MQ=255)

                                                                         cGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAct                  <  2:5437611/93‑1 (MQ=255)

                                                                            gCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggc               <  1:6110186/93‑1 (MQ=255)

                                                                                  aaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaa         >  1:2396860/1‑93 (MQ=255)

                                                                                    gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt       >  1:150676/1‑93 (MQ=255)

                                                                                      gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg     >  2:5687091/1‑93 (MQ=255)

                                                                                       aTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtggt    <  2:2252104/93‑1 (MQ=255)

CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG  >  NC_000913/4071811‑4071992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.

CGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  NC_000913/4071809‑4071994

CGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAC                                                                                              <  SRR4302543.5787421/94‑1 (MQ=60)

 GCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACC                                                                                             <  SRR4302543.2306892/94‑1 (MQ=60)

  CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCA                                                                                            >  SRR4302543.1176286/1‑94 (MQ=60)

   CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           >  SRR4302543.4486442/1‑94 (MQ=60)

   CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           >  SRR4302543.926126/1‑94 (MQ=60)

   CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           >  SRR4302543.7722543/1‑94 (MQ=60)

   CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           >  SRR4302543.6668083/1‑94 (MQ=60)

    GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          <  SRR4302543.856897/94‑1 (MQ=60)

    GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          >  SRR4302543.4139888/1‑94 (MQ=60)

    GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          <  SRR4302543.2775813/94‑1 (MQ=60)

    GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATAACCAGT                                                                                          <  SRR4302543.3712789/94‑1 (MQ=60)

    CCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          <  SRR4302543.856898/94‑1 (MQ=60)

     CAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTG                                                                                         >  SRR4302543.6532193/1‑94 (MQ=60)

     CAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTG                                                                                         <  SRR4302543.285755/94‑1 (MQ=60)

     CAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTG                                                                                         <  SRR4302543.1506930/94‑1 (MQ=60)

      AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        >  SRR4302543.6570145/1‑94 (MQ=60)

      AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        >  SRR4302543.3330131/1‑94 (MQ=60)

      AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        >  SRR4302543.7738143/1‑94 (MQ=60)

       GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG                                                                                       <  SRR4302543.4645884/94‑1 (MQ=60)

         ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT                                                                                     >  SRR4302543.33542/1‑94 (MQ=60)

         ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT                                                                                     <  SRR4302543.3424561/94‑1 (MQ=60)

          TATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTA                                                                                    >  SRR4302543.5375655/1‑94 (MQ=60)

           ATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAA                                                                                   >  SRR4302543.3814427/1‑94 (MQ=60)

           ATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAA                                                                                   >  SRR4302543.1848465/1‑94 (MQ=60)

              AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                >  SRR4302543.3987919/1‑94 (MQ=60)

              AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                >  SRR4302543.5034653/1‑94 (MQ=60)

              AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                >  SRR4302543.2608383/1‑94 (MQ=60)

              AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                <  SRR4302543.5885961/94‑1 (MQ=60)

               GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA                                                                               <  SRR4302543.611931/94‑1 (MQ=60)

                TGAGCTGGTGGCATTACGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG                                                                              <  SRR4302543.7106623/94‑1 (MQ=60)

                TGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG                                                                              <  SRR4302543.1424720/94‑1 (MQ=60)

                TGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG                                                                              <  SRR4302543.6896063/94‑1 (MQ=60)

                 GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG                                                                             <  SRR4302543.4734790/94‑1 (MQ=60)

                 GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG                                                                             <  SRR4302543.2494115/94‑1 (MQ=60)

                  AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGATCTGTGTGCTAAAACAGGC                                                                            >  SRR4302543.7065754/1‑94 (MQ=60)

                  AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC                                                                            >  SRR4302543.7977914/1‑94 (MQ=60)

                  AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC                                                                            <  SRR4302543.2586860/94‑1 (MQ=60)

                   GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA                                                                           <  SRR4302543.2767689/94‑1 (MQ=60)

                    CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCCGTGCGCTAAAACAGGCAC                                                                          >  SRR4302543.2686951/1‑94 (MQ=60)

                    CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC                                                                          <  SRR4302543.3681257/94‑1 (MQ=60)

                    CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC                                                                          >  SRR4302543.317047/1‑94 (MQ=60)

                    CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC                                                                          >  SRR4302543.2311951/1‑94 (MQ=60)

                      GGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAA                                                                        >  SRR4302543.975761/1‑94 (MQ=60)

                        TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC                                                                      >  SRR4302543.3512015/1‑94 (MQ=60)

                         GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG                                                                     >  SRR4302543.4625202/1‑94 (MQ=60)

                           CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT                                                                   >  SRR4302543.4007232/1‑94 (MQ=60)

                           CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT                                                                   <  SRR4302543.1667597/94‑1 (MQ=60)

                            ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC                                                                  >  SRR4302543.4479174/1‑94 (MQ=60)

                            ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC                                                                  >  SRR4302543.3450596/1‑94 (MQ=60)

                            ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC                                                                  >  SRR4302543.3102989/1‑94 (MQ=60)

                            ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC                                                                  >  SRR4302543.4590553/1‑94 (MQ=60)

                             TTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCA                                                                 <  SRR4302543.1325038/94‑1 (MQ=60)

                             TTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCA                                                                 >  SRR4302543.7594499/1‑94 (MQ=60)

                             TTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCA                                                                 >  SRR4302543.3631667/1‑94 (MQ=60)

                              TAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAC                                                                >  SRR4302543.5221029/1‑94 (MQ=60)

                              TAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAC                                                                <  SRR4302543.5852866/94‑1 (MQ=60)

                                AGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAA                                                              >  SRR4302543.6771088/1‑94 (MQ=60)

                                AGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAA                                                              >  SRR4302543.6585728/1‑94 (MQ=60)

                                 GCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAA                                                             >  SRR4302543.6338623/1‑94 (MQ=60)

                                 GCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAA                                                             <  SRR4302543.5509998/94‑1 (MQ=60)

                                 GCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAA                                                             <  SRR4302543.4413414/94‑1 (MQ=60)

                                  CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            >  SRR4302543.4285176/1‑94 (MQ=60)

                                   GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           >  SRR4302543.1839453/1‑94 (MQ=60)

                                   GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           >  SRR4302543.1359233/1‑94 (MQ=60)

                                   GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           <  SRR4302543.5152235/94‑1 (MQ=60)

                                   GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           >  SRR4302543.3304781/1‑94 (MQ=60)

                                    ATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG                                                          >  SRR4302543.1820231/1‑94 (MQ=60)

                                    ATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG                                                          <  SRR4302543.4681458/94‑1 (MQ=60)

                                    ATCACGCGGCCTTTTCAGAACCGGGCCTGGCGCGCTTAAAGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG                                                          >  SRR4302543.4443827/1‑94 (MQ=60)

                                     TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT                                                         <  SRR4302543.5848752/94‑1 (MQ=60)

                                     TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT                                                         >  SRR4302543.3990339/1‑94 (MQ=60)

                                      CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC                                                        <  SRR4302543.3201483/94‑1 (MQ=60)

                                       ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA                                                       <  SRR4302543.5154957/94‑1 (MQ=60)

                                       ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA                                                       >  SRR4302543.1082205/1‑94 (MQ=60)

                                        CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      >  SRR4302543.8003264/1‑94 (MQ=60)

                                        CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      >  SRR4302543.5258763/1‑94 (MQ=60)

                                        CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      <  SRR4302543.4538172/94‑1 (MQ=60)

                                         GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG                                                     >  SRR4302543.3197432/1‑94 (MQ=60)

                                         GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG                                                     <  SRR4302543.417294/94‑1 (MQ=60)

                                         GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG                                                     <  SRR4302543.2945098/94‑1 (MQ=60)

                                          CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT                                                    <  SRR4302543.4368299/94‑1 (MQ=60)

                                          CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT                                                    <  SRR4302543.4472092/94‑1 (MQ=60)

                                          CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT                                                    >  SRR4302543.3918934/1‑94 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302543.861151/1‑94 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302543.1412492/1‑94 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302543.5263248/1‑94 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302543.417989/1‑94 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   <  SRR4302543.5742681/94‑1 (MQ=60)

                                           GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302543.4317970/1‑94 (MQ=60)

                                           AGCCTTTTCAGAACCGGGTCTGGCGCGCTCAACGGGCGTGCAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   <  SRR4302543.5547345/94‑1 (MQ=60)

                                            GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT                                                  <  SRR4302543.5888961/94‑1 (MQ=60)

                                            GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT                                                  <  SRR4302543.2726909/94‑1 (MQ=60)

                                            GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT                                                  <  SRR4302543.5206726/94‑1 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGagagtggagat                                                >  SRR4302543.2693207/1‑83 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTTCTGTCTAT                                                >  SRR4302543.7451415/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.253596/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.2458258/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.5023790/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.2650001/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302543.1854092/94‑1 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.7210880/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.6370314/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302543.3580488/94‑1 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302543.171410/94‑1 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302543.6727105/1‑94 (MQ=60)

                                              CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCCAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302543.7453711/94‑1 (MQ=60)

                                               TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCGCAAACGCTCACAAATGGTCGTGTCTGTG                                               >  SRR4302543.6091767/1‑94 (MQ=60)

                                               TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG                                               <  SRR4302543.5363647/94‑1 (MQ=60)

                                               TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG                                               >  SRR4302543.1322508/1‑94 (MQ=60)

                                               TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG                                               <  SRR4302543.6626553/94‑1 (MQ=60)

                                               CTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG                                               <  SRR4302543.2279962/94‑1 (MQ=60)

                                                TTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGT                                              <  SRR4302543.5100094/94‑1 (MQ=60)

                                                 TTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTG                                             <  SRR4302543.538791/94‑1 (MQ=60)

                                                 TTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTG                                             <  SRR4302543.6733041/94‑1 (MQ=60)

                                                 TTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTG                                             <  SRR4302543.2615945/94‑1 (MQ=60)

                                                 TTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTG                                             <  SRR4302543.3346763/94‑1 (MQ=60)

                                                  TCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGA                                            >  SRR4302543.545412/1‑94 (MQ=60)

                                                   CAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAC                                           <  SRR4302543.7842821/94‑1 (MQ=60)

                                                   CAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAC                                           <  SRR4302543.6586122/94‑1 (MQ=60)

                                                    AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC                                          >  SRR4302543.1365985/1‑94 (MQ=60)

                                                    AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC                                          >  SRR4302543.191692/1‑94 (MQ=60)

                                                    AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC                                          >  SRR4302543.7874043/1‑94 (MQ=60)

                                                    AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC                                          <  SRR4302543.7525347/94‑1 (MQ=60)

                                                      AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCA                                        <  SRR4302543.947174/94‑1 (MQ=60)

                                                      AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCA                                        >  SRR4302543.7472064/1‑94 (MQ=60)

                                                      AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCA                                        <  SRR4302543.7614742/94‑1 (MQ=60)

                                                       ACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAG                                       <  SRR4302543.145560/94‑1 (MQ=60)

                                                       ACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAG                                       <  SRR4302543.4810778/94‑1 (MQ=60)

                                                       ACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAG                                       <  SRR4302543.510504/94‑1 (MQ=60)

                                                        CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG                                      >  SRR4302543.1083892/1‑94 (MQ=60)

                                                        CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG                                      >  SRR4302543.808773/1‑94 (MQ=60)

                                                        CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG                                      <  SRR4302543.221663/94‑1 (MQ=60)

                                                         CGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGG                                     <  SRR4302543.603746/94‑1 (MQ=60)

                                                          GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    >  SRR4302543.2107790/1‑94 (MQ=60)

                                                          GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    <  SRR4302543.2746353/94‑1 (MQ=60)

                                                          GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    >  SRR4302543.4308420/1‑94 (MQ=60)

                                                          GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    <  SRR4302543.1185964/94‑1 (MQ=60)

                                                           GGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTA                                   <  SRR4302543.1689030/94‑1 (MQ=60)

                                                            GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG                                  >  SRR4302543.7400266/1‑94 (MQ=60)

                                                            GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG                                  <  SRR4302543.3130437/94‑1 (MQ=60)

                                                            GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG                                  <  SRR4302543.7555432/94‑1 (MQ=60)

                                                             TCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGC                                 <  SRR4302543.6936877/94‑1 (MQ=60)

                                                              CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG                                >  SRR4302543.7053888/1‑94 (MQ=60)

                                                              CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG                                <  SRR4302543.926163/94‑1 (MQ=60)

                                                              CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG                                >  SRR4302543.6581914/1‑94 (MQ=60)

                                                               TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC                               >  SRR4302543.5483590/1‑94 (MQ=60)

                                                               TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC                               >  SRR4302543.2559705/1‑94 (MQ=60)

                                                               TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC                               >  SRR4302543.4946083/1‑94 (MQ=60)

                                                                 GCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAG                             <  SRR4302543.5077309/94‑1 (MQ=60)

                                                                 GCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAG                             >  SRR4302543.767178/1‑94 (MQ=60)

                                                                  CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGATCACAAATGGTCATGTCTATGTGACCCAGGGCAGCGCAGG                            >  SRR4302543.3350923/1‑94 (MQ=60)

                                                                   GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC                           >  SRR4302543.5311399/1‑94 (MQ=60)

                                                                    CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCCGGCT                          <  SRR4302543.2511250/94‑1 (MQ=60)

                                                                    CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          <  SRR4302543.3648457/94‑1 (MQ=60)

                                                                    CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          >  SRR4302543.7455143/1‑94 (MQ=60)

                                                                    CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          <  SRR4302543.2292422/94‑1 (MQ=60)

                                                                    CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          >  SRR4302543.1460338/1‑94 (MQ=60)

                                                                     GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG                         >  SRR4302543.2806008/1‑94 (MQ=60)

                                                                     GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG                         >  SRR4302543.7797484/1‑94 (MQ=60)

                                                                      CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGTGAGCGCAGGCTGC                        >  SRR4302543.1029159/1‑94 (MQ=60)

                                                                      CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGG                        >  SRR4302543.1029158/1‑94 (MQ=60)

                                                                      CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC                        >  SRR4302543.2518048/1‑94 (MQ=60)

                                                                      CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC                        >  SRR4302543.7364268/1‑94 (MQ=60)

                                                                       TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG                       >  SRR4302543.4728419/1‑94 (MQ=60)

                                                                       TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG                       <  SRR4302543.2078641/94‑1 (MQ=60)

                                                                       TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG                       >  SRR4302543.1989896/1‑94 (MQ=60)

                                                                       TTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCG                       >  SRR4302543.1770132/1‑94 (MQ=60)

                                                                        TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA                      >  SRR4302543.6865779/1‑94 (MQ=60)

                                                                        TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA                      >  SRR4302543.2120956/1‑94 (MQ=60)

                                                                        TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA                      >  SRR4302543.144426/1‑94 (MQ=60)

                                                                          ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT                    <  SRR4302543.1232059/94‑1 (MQ=60)

                                                                          ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT                    >  SRR4302543.4051227/1‑94 (MQ=60)

                                                                            GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  >  SRR4302543.3321607/1‑94 (MQ=60)

                                                                            GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  >  SRR4302543.5896203/1‑94 (MQ=60)

                                                                             GGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGC                 >  SRR4302543.5644021/1‑94 (MQ=60)

                                                                              GCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCT                <  SRR4302543.6168069/94‑1 (MQ=60)

                                                                              GCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCT                <  SRR4302543.3678393/94‑1 (MQ=60)

                                                                              GCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCT                >  SRR4302543.3772244/1‑94 (MQ=60)

                                                                               CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG               >  SRR4302543.7956595/1‑94 (MQ=60)

                                                                                GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302543.5130884/1‑94 (MQ=60)

                                                                                GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302543.4266451/1‑94 (MQ=60)

                                                                                GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302543.1269298/1‑94 (MQ=60)

                                                                                GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              <  SRR4302543.4358936/94‑1 (MQ=60)

                                                                                GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302543.950010/1‑94 (MQ=60)

                                                                                 TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             >  SRR4302543.2974502/1‑94 (MQ=60)

                                                                                 TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAAGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             >  SRR4302543.1351892/1‑94 (MQ=60)

                                                                                   AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA           >  SRR4302543.6040497/1‑94 (MQ=60)

                                                                                   AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA           >  SRR4302543.2418542/1‑94 (MQ=60)

                                                                                   AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA           <  SRR4302543.5786466/94‑1 (MQ=60)

                                                                                    AAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAA          >  SRR4302543.4377705/1‑94 (MQ=60)

                                                                                    AAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAA          <  SRR4302543.941506/94‑1 (MQ=60)

                                                                                     AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAT         >  SRR4302543.151983/1‑94 (MQ=60)

                                                                                      GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG        >  SRR4302543.6973659/1‑94 (MQ=60)

                                                                                        GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT      <  SRR4302543.3035016/94‑1 (MQ=60)

                                                                                         ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG     <  SRR4302543.7948094/94‑1 (MQ=60)

                                                                                         ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG     <  SRR4302543.7023298/94‑1 (MQ=60)

                                                                                          TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG    >  SRR4302543.4022916/1‑94 (MQ=60)

                                                                                           GGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG   <  SRR4302543.5226727/94‑1 (MQ=60)

                                                                                           GACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG   <  SRR4302543.5922582/94‑1 (MQ=60)

                                                                                            ACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGG  >  SRR4302543.1764537/1‑94 (MQ=60)

CGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  NC_000913/4071809‑4071994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`