Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,105,759 |
A→G |
I210V (ATC→GTC) |
pfkA → |
6‑phosphofructokinase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,105,759 | 0 | A | G | 99.6%
| 705.9
/ ‑4.8
| 229 | I210V (ATC→GTC) | pfkA | 6‑phosphofructokinase I |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (105/123); total (105/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.34e-01 |
Only 100 of 238 total aligned reads displayed.
GCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACC > NC_000913/4105669‑4105848
|
tGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTcgc < 1:3734009/93‑1 (MQ=255)
tGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTcgc > 1:1752275/1‑93 (MQ=255)
gCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGaaa > 2:1271397/1‑93 (MQ=255)
ccATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAg < 1:4312473/93‑1 (MQ=255)
ccATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAg < 1:2148473/93‑1 (MQ=255)
ccATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAg > 2:3926475/1‑93 (MQ=255)
aTTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGt < 2:3423954/93‑1 (MQ=255)
aTTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGt > 2:1539641/1‑93 (MQ=255)
ttGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTa > 2:4230389/1‑93 (MQ=255)
ttGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTa > 1:2049113/1‑93 (MQ=255)
ccGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaa < 2:2349001/93‑1 (MQ=255)
ccGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaa < 1:897973/93‑1 (MQ=255)
cGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaaa < 2:1149694/93‑1 (MQ=255)
ggTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaaaa < 1:801805/93‑1 (MQ=255)
ggTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaaaa < 1:2383390/93‑1 (MQ=255)
ggTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTaaaaaa < 2:928915/93‑1 (MQ=255)
gTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAac < 1:1942486/93‑1 (MQ=255)
tGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAaca < 2:4042814/93‑1 (MQ=255)
tGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAaca > 1:2617135/1‑93 (MQ=255)
tGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAaca > 1:1618005/1‑93 (MQ=255)
gCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACAcg > 1:3520929/1‑93 (MQ=255)
gCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACAcg > 1:1210251/1‑93 (MQ=255)
tgtgAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACAcgcg > 2:1728985/1‑93 (MQ=255)
tgAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGAt < 2:1109704/93‑1 (MQ=255)
gAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATc < 2:229785/93‑1 (MQ=255)
gAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATc < 2:2124679/93‑1 (MQ=255)
gAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATc < 1:1787524/93‑1 (MQ=255)
gAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATc > 1:2067142/1‑93 (MQ=255)
gAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATc < 1:2511067/93‑1 (MQ=255)
aaTTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCg < 1:1385692/93‑1 (MQ=255)
aaTTCGTTGTGGTTCCGGAAGGTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAAGTAAAAAACACGCGATCg > 1:1103036/1‑93 (MQ=255)
aTTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGt > 2:140497/1‑93 (MQ=255)
aTTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGt > 1:3859739/1‑93 (MQ=255)
aTTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGt < 2:1795942/93‑1 (MQ=255)
aTTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGt < 1:399690/93‑1 (MQ=255)
ttCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTg > 2:3359300/1‑93 (MQ=255)
tCGTTGTGGTTGCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTgg < 1:215722/93‑1 (MQ=255)
tCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTgg < 2:4587378/93‑1 (MQ=255)
cGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGc < 1:1161459/93‑1 (MQ=255)
gTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCg > 1:3031659/1‑93 (MQ=255)
ttGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGa < 1:3415511/93‑1 (MQ=255)
gtgGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAtt > 1:2674091/1‑93 (MQ=255)
gtgGTTCCGGAAGTTGAATGCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAtt < 2:4141103/93‑1 (MQ=255)
tgGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTa > 2:776958/1‑93 (MQ=255)
gTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTAcc > 2:1670124/1‑93 (MQ=255)
gtCCGGAAGTTGAATTCAGCCGTGAAGACCTGGCAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCg > 2:2145514/2‑93 (MQ=255)
ccGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGaa < 2:3600271/93‑1 (MQ=255)
ggAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGcaca > 2:2416816/1‑93 (MQ=255)
ggAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACa > 2:3849426/1‑93 (MQ=255)
ggAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACa > 2:3753601/1‑93 (MQ=255)
ggAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACa > 1:103009/1‑93 (MQ=255)
aaGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACata > 2:1063913/1‑93 (MQ=255)
aaGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACata < 2:3518445/93‑1 (MQ=255)
aGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACatat > 1:610958/1‑93 (MQ=255)
tGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAtgtg < 2:920660/93‑1 (MQ=255)
tGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAtgtg > 1:2278139/1‑93 (MQ=255)
tGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAtgtg < 2:592138/93‑1 (MQ=255)
gAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAtgtgt < 1:4631348/93‑1 (MQ=255)
gAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAtgtgt < 1:4208858/93‑1 (MQ=255)
aTTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGa < 1:2131671/93‑1 (MQ=255)
ttCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGAt < 1:4499210/93‑1 (MQ=255)
aGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGtt > 1:4119668/1‑93 (MQ=255)
ccGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGa < 1:4138460/93‑1 (MQ=255)
cGTGAAGACCTGGTAACCGAAATCAAAGCGGGTGCCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGAc < 2:4558764/93‑1 (MQ=255)
cGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGAc > 1:3345626/1‑93 (MQ=255)
gTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACg > 2:3123487/1‑93 (MQ=255)
gAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTgaagaa > 2:3555622/1‑93 (MQ=255)
gAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGaa < 2:3049464/93‑1 (MQ=255)
gAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGaa < 1:1880530/93‑1 (MQ=255)
aaGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAAc > 1:995726/1‑93 (MQ=255)
gACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTg < 1:1550070/93‑1 (MQ=255)
gACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTg < 2:1755006/93‑1 (MQ=255)
ccTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGgc < 1:3878334/93‑1 (MQ=255)
cTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGgcg > 2:540930/1‑93 (MQ=255)
cTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGgcg > 2:1312392/1‑93 (MQ=255)
tGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGgcgc > 2:2779435/1‑93 (MQ=255)
tGGTAAACGAAATCAAAGCGGGGGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAAATGgggc > 2:492058/1‑93 (MQ=255)
ggTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCa < 2:4415866/93‑1 (MQ=255)
ggTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCa < 1:1091425/93‑1 (MQ=255)
ggTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCa < 2:1419921/93‑1 (MQ=255)
ggTAAACGAAATCAAAGCGGGGGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCa > 1:1162449/1‑93 (MQ=255)
gTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAt < 1:743166/93‑1 (MQ=255)
gTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAt > 2:3092256/1‑93 (MQ=255)
gTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAt > 2:1600338/1‑93 (MQ=255)
tAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAtt < 1:4005530/93‑1 (MQ=255)
tAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAtt < 1:1412425/93‑1 (MQ=255)
aaCGAAATCAAAGCGGGTGTGGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAttta > 2:680210/1‑92 (MQ=255)
aaCGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTc < 2:2594064/93‑1 (MQ=255)
aCGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCa < 2:2166953/93‑1 (MQ=255)
aCGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCa > 1:322043/1‑93 (MQ=255)
aCGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCa < 1:2835361/93‑1 (MQ=255)
agAAATCAAAGCGGGTGTCGCGAAAAGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCAt < 2:1030500/92‑1 (MQ=255)
gAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATc > 1:4074414/1‑93 (MQ=255)
gAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATc > 1:2868049/1‑93 (MQ=255)
aaaGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGagaaa > 2:1926008/1‑93 (MQ=255)
aaaGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGagaaa > 1:4671160/1‑93 (MQ=255)
aGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGagaaaga < 1:3581577/93‑1 (MQ=255)
gCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGagaaagaa < 2:3865501/93‑1 (MQ=255)
gggTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAAc > 2:190788/1‑93 (MQ=255)
ggTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAAcc < 2:3974825/93‑1 (MQ=255)
|
GCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACC > NC_000913/4105669‑4105848
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC > NC_000913/4105666‑4105852
|
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTG < SRR4302535.2331427/94‑1 (MQ=60)
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTG < SRR4302535.4314148/94‑1 (MQ=60)
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTG < SRR4302535.1049631/94‑1 (MQ=60)
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTG < SRR4302535.578885/94‑1 (MQ=60)
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTG < SRR4302535.1127870/94‑1 (MQ=60)
TGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGT > SRR4302535.1005659/1‑94 (MQ=60)
GCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCG < SRR4302535.1903987/94‑1 (MQ=60)
CTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGC > SRR4302535.1768096/1‑94 (MQ=60)
CTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGC > SRR4302535.1764941/1‑94 (MQ=60)
TGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCG < SRR4302535.3759855/94‑1 (MQ=60)
CGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAA > SRR4302535.4174051/1‑94 (MQ=60)
GGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAA > SRR4302535.3899895/1‑94 (MQ=60)
GCCATTGCCGGTGGCTGTGTATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAG < SRR4302535.1165596/94‑1 (MQ=60)
CCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGG < SRR4302535.4341973/94‑1 (MQ=60)
CCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGG < SRR4302535.2071595/94‑1 (MQ=60)
CCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGG > SRR4302535.1334677/1‑94 (MQ=60)
CCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGG < SRR4302535.2163924/94‑1 (MQ=60)
CCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGG > SRR4302535.2164691/1‑94 (MQ=60)
CATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGT > SRR4302535.2381943/1‑94 (MQ=60)
ATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTA > SRR4302535.2063865/1‑94 (MQ=60)
CCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAA < SRR4302535.904338/94‑1 (MQ=60)
CGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAA > SRR4302535.499355/1‑94 (MQ=60)
GGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAAC < SRR4302535.2400506/94‑1 (MQ=60)
GGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAAC < SRR4302535.807440/94‑1 (MQ=60)
GTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACA > SRR4302535.1103147/1‑94 (MQ=60)
GTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACA < SRR4302535.1956477/94‑1 (MQ=60)
GTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACA > SRR4302535.1629658/1‑94 (MQ=60)
GTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACA > SRR4302535.2635896/1‑94 (MQ=60)
GGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACG > SRR4302535.3545383/1‑94 (MQ=60)
GGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACG > SRR4302535.2709720/1‑94 (MQ=60)
GGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACG > SRR4302535.1218944/1‑94 (MQ=60)
GCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGC < SRR4302535.4681751/94‑1 (MQ=60)
TGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGA < SRR4302535.4066755/94‑1 (MQ=60)
TGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATC > SRR4302535.2082044/1‑94 (MQ=60)
GAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCG < SRR4302535.1800452/94‑1 (MQ=60)
GAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCG < SRR4302535.2529166/94‑1 (MQ=60)
GAATTCGTTGTGGTTCCGGAAGGTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAAGTAAAAAACACGCGATCG > SRR4302535.1110917/1‑94 (MQ=60)
AATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGT < SRR4302535.1593595/94‑1 (MQ=60)
AATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGT < SRR4302535.1395581/94‑1 (MQ=60)
AATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGT > SRR4302535.3886304/1‑94 (MQ=60)
ATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTG < SRR4302535.402487/94‑1 (MQ=60)
TCGTTGTGGTTGCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGC < SRR4302535.217200/94‑1 (MQ=60)
CGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCG < SRR4302535.1169763/94‑1 (MQ=60)
CGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCG > SRR4302535.3052884/1‑94 (MQ=60)
TTGTGTTTCGGGAAGTGGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAT < SRR4302535.3354891/94‑1 (MQ=60)
TTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAT < SRR4302535.3439269/94‑1 (MQ=60)
TTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAT > SRR4302535.3144353/1‑94 (MQ=60)
TGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATT > SRR4302535.2693222/1‑94 (MQ=60)
TGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATT > SRR4302535.250422/1‑94 (MQ=60)
TTGGTTCCGGAAGCTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTA < SRR4302535.25338/94‑1 (MQ=60)
TGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTAC > SRR4302535.1225616/1‑94 (MQ=60)
GTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCG < SRR4302535.1968853/94‑1 (MQ=60)
TTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGA < SRR4302535.570978/94‑1 (MQ=60)
CCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAAC > SRR4302535.4026979/1‑94 (MQ=60)
CGGAAGTTGAATTCAGTCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA < SRR4302535.227383/94‑1 (MQ=60)
CGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA < SRR4302535.2098008/94‑1 (MQ=60)
CGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA < SRR4302535.3947741/94‑1 (MQ=60)
CGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA > SRR4302535.2687927/1‑94 (MQ=60)
CGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA > SRR4302535.103740/1‑94 (MQ=60)
CGGAAGTTGAATGCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACA < SRR4302535.1483734/94‑1 (MQ=60)
GGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACAT > SRR4302535.4546078/1‑94 (MQ=60)
GAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGTGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATA < SRR4302535.824651/94‑1 (MQ=60)
GAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATA > SRR4302535.1768853/1‑94 (MQ=60)
AAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAT > SRR4302535.3217586/1‑94 (MQ=60)
AAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAT > SRR4302535.3860217/1‑94 (MQ=60)
AAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAT < SRR4302535.287915/94‑1 (MQ=60)
AAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATAT > SRR4302535.615212/1‑94 (MQ=60)
AGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATG > SRR4302535.1193276/1‑94 (MQ=60)
GTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAAGTAAAAAAAACGCGATCGTGGCGATTACTGAACATATGT > SRR4302535.215342/1‑94 (MQ=60)
TTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTG < SRR4302535.721134/94‑1 (MQ=60)
TTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTG < SRR4302535.4577306/94‑1 (MQ=60)
TTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTG > SRR4302535.2294411/1‑94 (MQ=60)
GAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTG < SRR4302535.4237663/94‑1 (MQ=60)
GAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTG < SRR4302535.4662771/94‑1 (MQ=60)
GAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTG > SRR4302535.226085/1‑94 (MQ=60)
GAATTCAGCCGTGAAGACATGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGAGTAGCGAACATATGTGTG > SRR4302535.2145274/1‑94 (MQ=60)
AATTCAGGCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGA < SRR4302535.999048/94‑1 (MQ=60)
ATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGAT < SRR4302535.2147037/94‑1 (MQ=60)
ATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGAT < SRR4302535.1161352/94‑1 (MQ=60)
TTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATG < SRR4302535.4530104/94‑1 (MQ=60)
CAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTT > SRR4302535.4147862/1‑94 (MQ=60)
CAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTT < SRR4302535.3725370/94‑1 (MQ=60)
CCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGAC > SRR4302535.3368931/1‑94 (MQ=60)
CCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGAC < SRR4302535.4166802/94‑1 (MQ=60)
GAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAAC > SRR4302535.1002795/1‑94 (MQ=60)
GAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAAC < SRR4302535.1894083/94‑1 (MQ=60)
GAAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAAC < SRR4302535.2029691/94‑1 (MQ=60)
AAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACT > SRR4302535.3499055/1‑94 (MQ=60)
AAGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACT < SRR4302535.1640734/94‑1 (MQ=60)
AGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTG < SRR4302535.3665809/94‑1 (MQ=60)
AGACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTG > SRR4302535.1405899/1‑94 (MQ=60)
GACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGG < SRR4302535.1561236/94‑1 (MQ=60)
ACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGC > SRR4302535.3431192/1‑94 (MQ=60)
ACCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGC < SRR4302535.3382303/94‑1 (MQ=60)
CCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCG < SRR4302535.3904964/94‑1 (MQ=60)
CCTGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCG > SRR4302535.4227847/1‑94 (MQ=60)
TGGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCA > SRR4302535.1874028/1‑94 (MQ=60)
TGGTAAACGAAATCAAAGCGGGGGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCA > SRR4302535.1170756/1‑94 (MQ=60)
GGTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCAT < SRR4302535.1099202/94‑1 (MQ=60)
GTAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATT < SRR4302535.748383/94‑1 (MQ=60)
TAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTT < SRR4302535.1422508/94‑1 (MQ=60)
TAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTT < SRR4302535.4032930/94‑1 (MQ=60)
TAAACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTT > SRR4302535.767325/1‑94 (MQ=60)
AACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCA > SRR4302535.4097449/1‑94 (MQ=60)
AACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCA > SRR4302535.324273/1‑94 (MQ=60)
ACGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCAT < SRR4302535.2855482/94‑1 (MQ=60)
CGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATC > SRR4302535.2888361/1‑94 (MQ=60)
CGAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATC > SRR4302535.4102290/1‑94 (MQ=60)
GAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCG < SRR4302535.1170540/94‑1 (MQ=60)
GAAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCG < SRR4302535.1047710/94‑1 (MQ=60)
AAATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGA > SRR4302535.3553590/1‑94 (MQ=60)
ATCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGA < SRR4302535.1485336/94‑1 (MQ=60)
TCAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGTGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAA < SRR4302535.4362902/94‑1 (MQ=60)
CAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAA > SRR4302535.4702711/1‑94 (MQ=60)
CAAAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAA > SRR4302535.4145473/1‑94 (MQ=60)
AAGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGA < SRR4302535.4158718/94‑1 (MQ=60)
AGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAA > SRR4302535.3941896/1‑94 (MQ=60)
AGCGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAA < SRR4302535.3606419/94‑1 (MQ=60)
GCNGGTNNCGCGAAAGGTAAANNACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAA < SRR4302535.4266847/94‑1 (MQ=60)
CGGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAAC < SRR4302535.2952943/94‑1 (MQ=60)
GGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACC < SRR4302535.2542152/94‑1 (MQ=60)
GGGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACC > SRR4302535.867749/1‑94 (MQ=60)
GGTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCG > SRR4302535.1848821/1‑94 (MQ=60)
GTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGG < SRR4302535.3097041/94‑1 (MQ=60)
GTGTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGG < SRR4302535.4314223/94‑1 (MQ=60)
TGTCGAGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGT < SRR4302535.675838/94‑1 (MQ=60)
TTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC < SRR4302535.2295248/94‑1 (MQ=60)
GTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC > SRR4302535.2252487/1‑94 (MQ=60)
GTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC < SRR4302535.2519820/94‑1 (MQ=60)
GTCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC < SRR4302535.2648982/94‑1 (MQ=60)
|
TTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTC > NC_000913/4105666‑4105852
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
