Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,112,113 |
T→C |
intergenic (‑61/+36) |
fpr ← / ← glpX |
ferredoxin‑NADP reductase/GlpX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,112,113 | 0 | T | C | 99.6%
| 774.1
/ ‑5.2
| 244 | intergenic (‑61/+36) | fpr/glpX | ferredoxin‑NADP reductase/GlpX |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (117/126); total (117/127) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
Only 100 of 260 total aligned reads displayed.
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGG > NC_000913/4112023‑4112201
|
aGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGccc > 1:3652088/1‑93 (MQ=255)
tGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCg > 2:2996114/1‑93 (MQ=255)
tGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTAACTTCGTTCTCCGAACAAAAAAATTCCAGCCCCg > 1:3082601/1‑93 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa < 1:807331/93‑1 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa > 1:951527/1‑93 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa > 1:1844053/1‑93 (MQ=255)
cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg > 1:2529635/1‑93 (MQ=255)
tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg > 1:479113/1‑93 (MQ=255)
tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg > 2:240089/1‑93 (MQ=255)
ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa < 2:3249274/93‑1 (MQ=255)
tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc > 1:1011147/1‑93 (MQ=255)
tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc < 2:4476943/93‑1 (MQ=255)
gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACt < 2:3335290/93‑1 (MQ=255)
tttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa < 1:2221710/92‑1 (MQ=255)
gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa > 2:3667295/1‑93 (MQ=255)
gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa < 2:4274750/93‑1 (MQ=255)
aCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGc < 1:3491863/93‑1 (MQ=255)
aCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGc < 2:2649417/93‑1 (MQ=255)
cAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCa < 2:18455/93‑1 (MQ=255)
aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt < 2:1684042/93‑1 (MQ=255)
aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt > 1:3894903/1‑93 (MQ=255)
aGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGa > 1:1469802/1‑93 (MQ=255)
gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat > 2:4019463/1‑93 (MQ=255)
gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat > 2:2675439/1‑93 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 1:1039626/93‑1 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 2:2207704/93‑1 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 2:2445036/93‑1 (MQ=255)
cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca > 2:1484382/1‑93 (MQ=255)
aTGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaa > 1:289955/1‑93 (MQ=255)
tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa < 2:3295309/93‑1 (MQ=255)
gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat > 2:4144441/1‑93 (MQ=255)
gTTTATCTCCGGTTTTGAGTGACTGGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat < 2:2027406/93‑1 (MQ=255)
tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc < 1:2014554/93‑1 (MQ=255)
tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc < 1:1239730/93‑1 (MQ=255)
tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc < 1:4009134/93‑1 (MQ=255)
tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc < 1:3009063/93‑1 (MQ=255)
ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca > 2:923018/1‑93 (MQ=255)
ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca < 1:2786404/93‑1 (MQ=255)
ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca < 1:707737/93‑1 (MQ=255)
ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga > 1:3553629/1‑93 (MQ=255)
ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga > 2:3045487/1‑93 (MQ=255)
cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag > 2:376122/1‑93 (MQ=255)
cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag > 1:2149369/1‑93 (MQ=255)
gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa < 2:965133/93‑1 (MQ=255)
ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt < 1:1199915/93‑1 (MQ=255)
ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt > 2:290778/1‑93 (MQ=255)
ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt < 1:3265942/93‑1 (MQ=255)
ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt < 1:2042942/93‑1 (MQ=255)
gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTACAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAggtga > 2:3173932/1‑92 (MQ=255)
attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa < 1:626584/93‑1 (MQ=255)
attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa > 2:4330200/1‑93 (MQ=255)
attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa < 2:4122674/93‑1 (MQ=255)
attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa > 1:3708439/1‑93 (MQ=255)
attgaCTTGCCTTATCTTCGTACTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa < 2:3103067/93‑1 (MQ=255)
ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc > 1:2913654/1‑93 (MQ=255)
ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc < 1:89249/93‑1 (MQ=255)
tgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAcc < 1:3025236/93‑1 (MQ=255)
gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt < 2:2874188/93‑1 (MQ=255)
ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa > 2:725907/1‑93 (MQ=255)
ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa > 2:1044878/1‑93 (MQ=255)
ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa > 1:4650015/1‑93 (MQ=255)
gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt > 2:4134400/1‑93 (MQ=255)
gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt < 2:3547546/93‑1 (MQ=255)
cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCTCCTGCATTTc < 2:469205/93‑1 (MQ=255)
cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc < 1:1678948/93‑1 (MQ=255)
cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc < 1:3398619/93‑1 (MQ=255)
cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCGCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc > 1:3035636/1‑93 (MQ=255)
ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc < 1:1313874/93‑1 (MQ=255)
tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg > 1:2691911/1‑93 (MQ=255)
tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg < 2:1894588/93‑1 (MQ=255)
ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc < 1:2617988/93‑1 (MQ=255)
ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc > 1:4216872/1‑93 (MQ=255)
tCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCt > 1:3124996/1‑93 (MQ=255)
cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGTATGTGCACCTGCATTTCCGGGTCtt < 2:4595709/93‑1 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt < 2:4556717/93‑1 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt < 2:3961810/93‑1 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt < 1:1621623/93‑1 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt > 1:3777493/1‑93 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttg < 1:4424435/93‑2 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATATGCACCTGCATTTCCGGGTCttt > 2:816020/1‑93 (MQ=255)
ctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCg > 1:857947/1‑93 (MQ=255)
tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa > 2:2801160/1‑93 (MQ=255)
tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa < 1:1458863/93‑1 (MQ=255)
tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCGTTGCGa > 2:1366228/1‑93 (MQ=255)
gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc > 1:3840326/1‑93 (MQ=255)
gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCCCAATCGATCAAATCAATCAGAGGATGTGCACCCGCATTTCCGGGTTTTTGCGATcc < 2:3639455/93‑1 (MQ=255)
aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa < 2:159391/93‑1 (MQ=255)
aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa < 2:156211/93‑1 (MQ=255)
aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa > 2:3380468/1‑93 (MQ=255)
aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa > 1:3584497/1‑93 (MQ=255)
aaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg > 1:4460706/1‑93 (MQ=255)
aaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg > 1:1916557/1‑93 (MQ=255)
aaaaaTTCCAGCCCAGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg < 1:2114858/93‑1 (MQ=255)
aaaaaTCCCAGCCCCGAACGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg < 1:2327291/93‑1 (MQ=255)
aaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGt < 1:1825966/93‑1 (MQ=255)
aaaaTCCTAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGt < 2:2305556/93‑1 (MQ=255)
aaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgg < 2:1028528/93‑1 (MQ=255)
aTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgga > 1:3954309/1‑93 (MQ=255)
ttCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat < 2:1133224/93‑1 (MQ=255)
ccAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatgg < 2:340159/93‑1 (MQ=255)
|
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGG > NC_000913/4112023‑4112201
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACTG > NC_000913/4112022‑4112205
|
TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC > SRR4302535.3677376/1‑94 (MQ=60)
TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC < SRR4302535.156754/94‑1 (MQ=60)
GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTAACTTCGTTCTCCGAACAAAAAAATTCCAGCCCCG > SRR4302535.3104084/1‑94 (MQ=60)
GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA > SRR4302535.958273/1‑94 (MQ=60)
GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA > SRR4302535.1857349/1‑94 (MQ=60)
GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA > SRR4302535.3874219/1‑94 (MQ=60)
ACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAG > SRR4302535.2547862/1‑94 (MQ=60)
ACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAG < SRR4302535.812990/94‑1 (MQ=60)
CTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGG > SRR4302535.482475/1‑94 (MQ=60)
TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA > SRR4302535.895443/1‑94 (MQ=60)
TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA > SRR4302535.304061/1‑94 (MQ=60)
TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC > SRR4302535.4029410/1‑94 (MQ=60)
TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC > SRR4302535.1018330/1‑94 (MQ=60)
TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT < SRR4302535.3460058/94‑1 (MQ=60)
GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG < SRR4302535.3968806/94‑1 (MQ=60)
CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG > SRR4302535.2434998/1‑94 (MQ=60)
CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA > SRR4302535.2024520/1‑94 (MQ=60)
TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA < SRR4302535.1899657/94‑1 (MQ=60)
TTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG < SRR4302535.2237527/94‑1 (MQ=60)
GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG < SRR4302535.3607580/94‑1 (MQ=60)
TTCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGC < SRR4302535.594473/94‑1 (MQ=60)
TACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGC < SRR4302535.3688949/94‑1 (MQ=60)
TACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGC > SRR4302535.3207065/1‑94 (MQ=60)
ACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCT < SRR4302535.2058853/94‑1 (MQ=60)
ACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCT < SRR4302535.3516126/94‑1 (MQ=60)
ACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCT > SRR4302535.1994233/1‑94 (MQ=60)
CAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAA > SRR4302535.1845020/1‑94 (MQ=60)
AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT > SRR4302535.3921599/1‑94 (MQ=60)
AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT > SRR4302535.2995926/1‑94 (MQ=60)
AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT < SRR4302535.2655224/94‑1 (MQ=60)
ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC < SRR4302535.3139894/94‑1 (MQ=60)
TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG < SRR4302535.4372309/94‑1 (MQ=60)
CAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGA > SRR4302535.1480330/1‑94 (MQ=60)
CAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGA > SRR4302535.1415494/1‑94 (MQ=60)
AGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT < SRR4302535.357091/94‑1 (MQ=60)
AGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT < SRR4302535.2327398/94‑1 (MQ=60)
GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC > SRR4302535.1819200/1‑94 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTGTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA > SRR4302535.3318336/1‑94 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA < SRR4302535.1047001/94‑1 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA > SRR4302535.2585123/1‑94 (MQ=60)
CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA > SRR4302535.4690221/1‑94 (MQ=60)
CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA > SRR4302535.291987/1‑94 (MQ=60)
ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA > SRR4302535.2964042/1‑94 (MQ=60)
ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGATCAATCGATCAAA > SRR4302535.3957917/1‑94 (MQ=60)
GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC > SRR4302535.2728319/1‑94 (MQ=60)
GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC < SRR4302535.4175269/94‑1 (MQ=60)
TTTTTCTCCTGTTTTGATTGATTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA < SRR4302535.3181012/94‑1 (MQ=60)
TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA < SRR4302535.3723820/94‑1 (MQ=60)
TTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCAAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATAAA > SRR4302535.3047589/1‑94 (MQ=60)
TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA < SRR4302535.2029064/94‑1 (MQ=60)
TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA < SRR4302535.3030140/94‑1 (MQ=60)
TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA < SRR4302535.1248579/94‑1 (MQ=60)
TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA < SRR4302535.4036559/94‑1 (MQ=60)
CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG < SRR4302535.266386/94‑1 (MQ=60)
CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG < SRR4302535.473803/94‑1 (MQ=60)
CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG < SRR4302535.2806233/94‑1 (MQ=60)
CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG < SRR4302535.712704/94‑1 (MQ=60)
TCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGA > SRR4302535.3088985/1‑94 (MQ=60)
TCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGA > SRR4302535.3578286/1‑94 (MQ=60)
TCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGA < SRR4302535.1853740/94‑1 (MQ=60)
CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG > SRR4302535.2164826/1‑94 (MQ=60)
GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT < SRR4302535.106905/94‑1 (MQ=60)
GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT < SRR4302535.330209/94‑1 (MQ=60)
GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAG > SRR4302535.2930375/1‑94 (MQ=60)
TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG < SRR4302535.1208513/94‑1 (MQ=60)
TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG < SRR4302535.825133/94‑1 (MQ=60)
TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG < SRR4302535.866304/94‑1 (MQ=60)
TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG < SRR4302535.3288632/94‑1 (MQ=60)
TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG < SRR4302535.2057660/94‑1 (MQ=60)
TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG < SRR4302535.1267980/94‑1 (MQ=60)
TGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGC > SRR4302535.1509998/1‑94 (MQ=60)
GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA > SRR4302535.3734117/1‑94 (MQ=60)
GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA > SRR4302535.4524511/1‑94 (MQ=60)
ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCTAAGGGCTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGGGCAC > SRR4302535.1499694/1‑94 (MQ=60)
ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC < SRR4302535.630943/94‑1 (MQ=60)
ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC > SRR4302535.2934234/1‑94 (MQ=60)
ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC > SRR4302535.3845679/1‑94 (MQ=60)
ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC > SRR4302535.10584/1‑94 (MQ=60)
TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC < SRR4302535.89879/94‑1 (MQ=60)
TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC < SRR4302535.3824353/94‑1 (MQ=60)
TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT < SRR4302535.3046413/94‑1 (MQ=60)
GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG > SRR4302535.3614518/1‑94 (MQ=60)
GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG > SRR4302535.4603216/1‑94 (MQ=60)
GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG < SRR4302535.3759257/94‑1 (MQ=60)
CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA > SRR4302535.4681507/1‑94 (MQ=60)
CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA > SRR4302535.354647/1‑94 (MQ=60)
CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC > SRR4302535.4456869/1‑94 (MQ=60)
CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC > SRR4302535.2052265/1‑94 (MQ=60)
CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCGCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC > SRR4302535.3056891/1‑94 (MQ=60)
CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC < SRR4302535.2596461/94‑1 (MQ=60)
CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC > SRR4302535.929335/1‑94 (MQ=60)
CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC < SRR4302535.3033020/94‑1 (MQ=60)
CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC < SRR4302535.3422267/94‑1 (MQ=60)
CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC < SRR4302535.1691104/94‑1 (MQ=60)
TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG < SRR4302535.2088419/94‑1 (MQ=60)
TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG < SRR4302535.1323264/94‑1 (MQ=60)
TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG > SRR4302535.2711153/1‑94 (MQ=60)
TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCACCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG > SRR4302535.778136/1‑94 (MQ=60)
ATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGG < SRR4302535.3070488/94‑1 (MQ=60)
ATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGG < SRR4302535.1667453/94‑1 (MQ=60)
TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT > SRR4302535.2810614/1‑94 (MQ=60)
CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC < SRR4302535.1710069/94‑1 (MQ=60)
CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC > SRR4302535.2135455/1‑94 (MQ=60)
CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC > SRR4302535.4245727/1‑94 (MQ=60)
TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT > SRR4302535.4014808/1‑94 (MQ=60)
TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT > SRR4302535.2148376/1‑94 (MQ=60)
TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT < SRR4302535.2636757/94‑1 (MQ=60)
TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT > SRR4302535.3146761/1‑94 (MQ=60)
CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT > SRR4302535.3803532/1‑94 (MQ=60)
CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT < SRR4302535.694059/94‑1 (MQ=60)
CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT < SRR4302535.4345514/94‑1 (MQ=60)
GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG < SRR4302535.2218063/94‑1 (MQ=60)
GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG < SRR4302535.1633329/94‑1 (MQ=60)
GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTGG < SRR4302535.4454737/94‑1 (MQ=60)
TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG > SRR4302535.863995/1‑94 (MQ=60)
CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA > SRR4302535.1041099/1‑94 (MQ=60)
TCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAT < SRR4302535.1469319/94‑1 (MQ=60)
TCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAT < SRR4302535.1469318/94‑1 (MQ=60)
CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC > SRR4302535.3866790/1‑94 (MQ=60)
AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG < SRR4302535.1317976/94‑1 (MQ=60)
ACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGA < SRR4302535.2865571/94‑1 (MQ=60)
CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT > SRR4302535.1247725/1‑94 (MQ=60)
AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA > SRR4302535.3609356/1‑94 (MQ=60)
AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG > SRR4302535.1930366/1‑94 (MQ=60)
AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG > SRR4302535.4491300/1‑94 (MQ=60)
AAAAAATTCCAGCCCCGAAGGACTGGAAGGCCCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG < SRR4302535.831468/94‑1 (MQ=60)
AAAAATTCCAGCCCAGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGT < SRR4302535.2130122/94‑1 (MQ=60)
AAAAATCCCAGCCCCGAACGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGT < SRR4302535.2343944/94‑1 (MQ=60)
AAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTG < SRR4302535.3672700/94‑1 (MQ=60)
AAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTG < SRR4302535.1839147/94‑1 (MQ=60)
AAATTCCAGCCCCGAAGGACTGGAAGGCTCACTCGATCAAATCAATCCGAGGATGTGCACCTGCATCTCCGGGTCTTTGCGATCCAGATCGTGG > SRR4302535.2254952/1‑94 (MQ=60)
AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA > SRR4302535.3981304/1‑94 (MQ=60)
AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA < SRR4302535.707668/94‑1 (MQ=60)
ATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGAT > SRR4302535.1451192/1‑94 (MQ=60)
AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT < SRR4302535.4021044/94‑1 (MQ=60)
GCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACTG > SRR4302535.1110906/1‑94 (MQ=60)
|
TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACTG > NC_000913/4112022‑4112205
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
