Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,112,113 T→C intergenic (‑61/+36) fpr ← / ← glpX ferredoxin‑NADP reductase/GlpX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,112,1130TC100.0% 1253.7 / NA 393intergenic (‑61/+36)fpr/glpXferredoxin‑NADP reductase/GlpX
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (201/192);  total (201/192)

Only 100 of 404 total aligned reads displayed.

GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112024‑4112202
                                                                                         |                                                                                         
  gACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGa                                                                                      <  2:879535/93‑1 (MQ=255)
  gACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGa                                                                                      >  1:5502685/1‑93 (MQ=255)
   aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa                                                                                     >  1:7748252/1‑93 (MQ=255)
   aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa                                                                                     >  1:6722530/1‑93 (MQ=255)
    cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg                                                                                    <  1:3273051/93‑1 (MQ=255)
     tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg                                                                                   <  1:684658/93‑1 (MQ=255)
     tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg                                                                                   <  1:4337338/93‑1 (MQ=255)
       tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  1:2521046/93‑1 (MQ=255)
       tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 >  2:4442962/1‑93 (MQ=255)
        gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACt                                                                                <  2:6126280/93‑1 (MQ=255)
        gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACt                                                                                <  1:6208013/93‑1 (MQ=255)
         ccTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTg                                                                               >  1:6522815/1‑93 (MQ=255)
          cTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTgg                                                                              >  1:3562947/1‑93 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:3808294/1‑93 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:5722824/1‑93 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:4826726/1‑93 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:7171553/1‑93 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             <  2:215206/93‑1 (MQ=255)
           tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             <  2:4980553/93‑1 (MQ=255)
            gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            >  2:7435762/1‑93 (MQ=255)
            gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  1:2975764/93‑1 (MQ=255)
            gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  1:5042515/93‑1 (MQ=255)
             ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg                                                                           <  1:3531574/93‑1 (MQ=255)
             ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg                                                                           <  2:316446/93‑1 (MQ=255)
             ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg                                                                           <  2:7275047/93‑1 (MQ=255)
                 ccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTc                                                                       <  1:3177341/93‑1 (MQ=255)
                 ccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTc                                                                       >  2:5992604/1‑93 (MQ=255)
                  cAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCa                                                                      <  2:2518342/93‑1 (MQ=255)
                    aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  1:3692931/1‑93 (MQ=255)
                    aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  2:4367074/1‑93 (MQ=255)
                    aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  2:1064880/1‑93 (MQ=255)
                    aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    <  2:345871/93‑1 (MQ=255)
                      cAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCg                                                                  >  1:1564579/1‑93 (MQ=255)
                       aGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGa                                                                 >  2:2628741/1‑93 (MQ=255)
                         ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc                                                               <  2:3976011/93‑1 (MQ=255)
                          cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              >  1:808439/1‑93 (MQ=255)
                           aTGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaa                                                             >  2:6252999/1‑93 (MQ=255)
                            tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            >  1:6070419/1‑93 (MQ=255)
                             gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  2:4148749/1‑93 (MQ=255)
                              tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAATGACTGGAAGGCTCAATCGatcaaatc                                                          <  2:3077410/93‑1 (MQ=255)
                              tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc                                                          <  1:4613093/93‑1 (MQ=255)
                              tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc                                                          <  1:1817802/93‑1 (MQ=255)
                               ttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatca                                                         <  1:2267293/93‑1 (MQ=255)
                                tttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatcaa                                                        <  1:5882747/93‑1 (MQ=255)
                                   ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca                                                     <  2:1471799/93‑1 (MQ=255)
                                   ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca                                                     <  2:641106/93‑1 (MQ=255)
                                    tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  1:1182632/1‑93 (MQ=255)
                                    tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  2:372089/1‑93 (MQ=255)
                                    tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  2:5585124/1‑93 (MQ=255)
                                     ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  1:899006/93‑1 (MQ=255)
                                      cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag                                                  <  1:3358391/93‑1 (MQ=255)
                                       tGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGCgg                                                 >  2:3876739/1‑93 (MQ=255)
                                       tGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAgg                                                 >  2:4795684/1‑93 (MQ=255)
                                        gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:1236137/93‑1 (MQ=255)
                                        gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:3825273/93‑1 (MQ=255)
                                        gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:4527203/93‑1 (MQ=255)
                                        gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:2088696/93‑1 (MQ=255)
                                        gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  2:2488295/93‑1 (MQ=255)
                                          tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg                                              <  2:7098102/93‑1 (MQ=255)
                                          tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg                                              <  1:4440322/93‑1 (MQ=255)
                                            tgattgaCTTTCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgtt                                            <  2:787984/93‑2 (MQ=255)
                                            tgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgtg                                            >  2:3255133/1‑93 (MQ=255)
                                             gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGc                                           >  2:5487079/1‑93 (MQ=255)
                                             gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGc                                           <  1:6630724/93‑1 (MQ=255)
                                              attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa                                          <  1:6449619/93‑1 (MQ=255)
                                                    ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa                                    <  1:2417799/93‑1 (MQ=255)
                                                        cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  1:5251225/1‑93 (MQ=255)
                                                        cTTATCTTCGTTCTCCGAACAAAAAATTACAGCCCCGAAGGACTGGAAGGCTCAACCCAGCAAATCAATCCGAGGGTGTGCACCTGCAATTcc                               >  1:3920199/1‑93 (MQ=255)
                                                         ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc                               >  2:1349375/1‑93 (MQ=255)
                                                         ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc                               >  1:2155368/1‑93 (MQ=255)
                                                          tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              >  2:2374045/1‑93 (MQ=255)
                                                          tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              >  2:3374783/1‑93 (MQ=255)
                                                          tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              <  2:1871409/93‑1 (MQ=255)
                                                          tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGACCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              <  2:202938/93‑1 (MQ=255)
                                                           aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg                             >  2:7713211/1‑93 (MQ=255)
                                                            tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            <  2:3286160/93‑1 (MQ=255)
                                                            tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            <  2:156531/93‑1 (MQ=255)
                                                            tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            >  2:6882649/1‑93 (MQ=255)
                                                            tCTTCGTGCTCCGAACAAAAAAATTCCAGCCCCGAAGGATGGGAAGGCTCAATCGAGCAAATCAAGCAGAGGATGTGCACTTGCATTGCCggg                            >  1:7002068/1‑93 (MQ=255)
                                                              ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  1:6333311/1‑93 (MQ=255)
                                                              ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          <  2:6653004/93‑1 (MQ=255)
                                                               tCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCt                         <  1:5966185/93‑1 (MQ=255)
                                                                cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt                        <  1:1027006/93‑1 (MQ=255)
                                                                cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt                        <  2:1212308/93‑1 (MQ=255)
                                                                  ttCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGGTGTGCACCTGCATTTCCGGGTCTTTg                      >  2:4861332/1‑93 (MQ=255)
                                                                  ttCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTg                      >  2:4601049/1‑93 (MQ=255)
                                                                  ttCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTg                      >  1:3717627/1‑93 (MQ=255)
                                                                    ctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCg                    >  1:2761132/1‑93 (MQ=255)
                                                                     tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa                   >  1:7577718/1‑93 (MQ=255)
                                                                      ccGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAt                  <  1:4134919/93‑1 (MQ=255)
                                                                       cGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATc                 >  2:5086146/1‑93 (MQ=255)
                                                                        gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc                <  2:2873937/93‑1 (MQ=255)
                                                                         aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               >  1:1379704/1‑93 (MQ=255)
                                                                            aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt            <  1:558326/93‑1 (MQ=255)
                                                                            aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt            <  1:7644888/93‑1 (MQ=255)
                                                                             aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa           <  1:5338196/93‑1 (MQ=255)
                                                                              aaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGCTAg          >  1:7301030/1‑93 (MQ=255)
                                                                                aaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtg        <  1:5791517/93‑1 (MQ=255)
                                                                                   ttCCAGCCTCGAAGGACTGGAAGGCTGAATCGACCAAATCAATCAGGGGATGTGCACCTGCATTTCCGGGTCTTTGCTTTCCAGATAGcggat     >  2:6782683/1‑93 (MQ=255)
                                                                                      cAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatggc  >  1:7470954/1‑92 (MQ=255)
                                                                                         |                                                                                         
GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112024‑4112202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112020‑4112202
                                                                                             |                                                                                         
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGC                                                                                           <  SRR4302543.6422993/94‑1 (MQ=60)
 TTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCC                                                                                          <  SRR4302543.4209795/94‑1 (MQ=60)
 TTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCC                                                                                          >  SRR4302543.7490908/1‑94 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                        >  SRR4302543.3743999/1‑94 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                        >  SRR4302543.851084/1‑94 (MQ=60)
   AGTGACTTTGCCGGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAGAAATTCCAGCCCC                                                                                        >  SRR4302543.3744215/1‑94 (MQ=60)
    GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCG                                                                                       >  SRR4302543.2504447/1‑94 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                      >  SRR4302543.5552630/1‑94 (MQ=60)
      GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA                                                                                     >  SRR4302543.6786061/1‑94 (MQ=60)
      GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA                                                                                     >  SRR4302543.7821425/1‑94 (MQ=60)
        CTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGTCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGG                                                                                   >  SRR4302543.1223212/1‑94 (MQ=60)
        CTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGG                                                                                   <  SRR4302543.3302617/94‑1 (MQ=60)
        CTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGG                                                                                   >  SRR4302543.5060615/1‑94 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                  <  SRR4302543.4376678/94‑1 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                  <  SRR4302543.690968/94‑1 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                  <  SRR4302543.4376677/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                 <  SRR4302543.6081081/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                 <  SRR4302543.6059892/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.5746512/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                >  SRR4302543.6519282/1‑94 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.2543963/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.2543962/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.6455138/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.5929148/94‑1 (MQ=60)
           TCCCTGTTACCCAATCAGCCATGTTTGTCGCCTGGTGTGAGTGACTTGCCTTATCGTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                <  SRR4302543.6455139/94‑1 (MQ=60)
            GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG                                                                               <  SRR4302543.6266627/94‑1 (MQ=60)
             CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG                                                                              >  SRR4302543.2884483/1‑94 (MQ=60)
             CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG                                                                              >  SRR4302543.3594484/1‑94 (MQ=60)
             CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG                                                                              >  SRR4302543.3594483/1‑94 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                             >  SRR4302543.7241185/1‑94 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                             >  SRR4302543.3841871/1‑94 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                             >  SRR4302543.4870771/1‑94 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                            >  SRR4302543.6957636/1‑94 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                            >  SRR4302543.762307/1‑94 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                            >  SRR4302543.5385531/1‑94 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                            >  SRR4302543.6822024/1‑94 (MQ=60)
                GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG                                                                           <  SRR4302543.3002787/94‑1 (MQ=60)
                GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG                                                                           >  SRR4302543.1476496/1‑94 (MQ=60)
                GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG                                                                           <  SRR4302543.5088372/94‑1 (MQ=60)
                 TTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGG                                                                          <  SRR4302543.4009592/94‑1 (MQ=60)
                 TTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGG                                                                          <  SRR4302543.3563019/94‑1 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                      >  SRR4302543.6604995/1‑94 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                      >  SRR4302543.7767252/1‑94 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                      <  SRR4302543.3205974/94‑1 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                      >  SRR4302543.6285329/1‑94 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCACCCCCGAGGGCCTGGAAGGCTAA                                                                      >  SRR4302543.6604996/1‑94 (MQ=60)
                       CATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.6246156/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    >  SRR4302543.3725389/1‑94 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.3846128/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.3649158/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    >  SRR4302543.72595/1‑94 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.2788093/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.5301102/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                    <  SRR4302543.1809115/94‑1 (MQ=60)
                        ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC                                                                   <  SRR4302543.5139102/94‑1 (MQ=60)
                         TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG                                                                  >  SRR4302543.1578556/1‑94 (MQ=60)
                          CAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGA                                                                 <  SRR4302543.1609157/94‑1 (MQ=60)
                          CAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGA                                                                 <  SRR4302543.5818090/94‑1 (MQ=60)
                           AGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT                                                                <  SRR4302543.7522749/94‑1 (MQ=60)
                           AGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT                                                                <  SRR4302543.5970423/94‑1 (MQ=60)
                            GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC                                                               >  SRR4302543.3370611/1‑94 (MQ=60)
                             CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA                                                              <  SRR4302543.1928028/94‑1 (MQ=60)
                             CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA                                                              >  SRR4302543.815562/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                             >  SRR4302543.5078670/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                             >  SRR4302543.7031307/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                             <  SRR4302543.3385832/94‑1 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.5870709/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.6127951/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.91012/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.3485654/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.7559647/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                            >  SRR4302543.2398203/1‑94 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                           <  SRR4302543.7567415/94‑1 (MQ=60)
                                TGTTTTGCTCCTGTTTTGATTGACTTGCCTTATCTTCGTGCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                           <  SRR4302543.1213001/94‑1 (MQ=60)
                                 GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC                                                          >  SRR4302543.80340/1‑94 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCATTCGATCAAATCA                                                         >  SRR4302543.1413238/1‑94 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA                                                         <  SRR4302543.1834106/94‑1 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA                                                         >  SRR4302543.5657401/1‑94 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA                                                         <  SRR4302543.4654995/94‑1 (MQ=60)
                                   TTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAA                                                        <  SRR4302543.2287997/94‑1 (MQ=60)
                                   TTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAA                                                        <  SRR4302543.7748873/94‑1 (MQ=60)
                                    TTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCTCGAAGGACTGGAAGGCTCAATCGATCAAATCAAT                                                       >  SRR4302543.5642629/1‑94 (MQ=60)
                                     TTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATC                                                      >  SRR4302543.6450190/1‑94 (MQ=60)
                                     TTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATC                                                      >  SRR4302543.6518216/1‑94 (MQ=60)
                                     TTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATC                                                      <  SRR4302543.3834219/94‑1 (MQ=60)
                                     TGCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATC                                                      <  SRR4302543.899144/94‑1 (MQ=60)
                                      TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                     >  SRR4302543.6912339/1‑94 (MQ=60)
                                      TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                     <  SRR4302543.6712932/94‑1 (MQ=60)
                                      TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                     <  SRR4302543.4406034/94‑1 (MQ=60)
                                       CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG                                                    >  SRR4302543.1193319/1‑94 (MQ=60)
                                       CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG                                                    >  SRR4302543.5221676/1‑94 (MQ=60)
                                       CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAA                                                    >  SRR4302543.5444860/1‑94 (MQ=60)
                                       CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCACCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG                                                    >  SRR4302543.6550993/1‑94 (MQ=60)
                                        TCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGA                                                   <  SRR4302543.6291198/94‑1 (MQ=60)
                                         CCTGTTTTGTTTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  <  SRR4302543.2166444/94‑1 (MQ=60)
                                         CCTGTTTTGATTTACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  <  SRR4302543.4522897/94‑1 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  <  SRR4302543.4522896/94‑1 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  >  SRR4302543.757552/1‑94 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  >  SRR4302543.2166731/1‑94 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  <  SRR4302543.3120115/94‑1 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                  <  SRR4302543.906942/94‑1 (MQ=60)
                                          CTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGG                                                 <  SRR4302543.3388602/94‑1 (MQ=60)
                                           TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA                                                >  SRR4302543.7438130/1‑94 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               <  SRR4302543.4568402/94‑1 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               <  SRR4302543.2107359/94‑1 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               >  SRR4302543.7315996/1‑94 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               <  SRR4302543.3859016/94‑1 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               >  SRR4302543.1167523/1‑94 (MQ=60)
                                            GTGTTGATTGACTTTGCTTCTCTGCGTTCTCCGACAAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                               <  SRR4302543.669417/94‑1 (MQ=60)
                                             TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG                                              >  SRR4302543.6899689/1‑94 (MQ=60)
                                             TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG                                              <  SRR4302543.1081861/94‑1 (MQ=60)
                                             TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG                                              <  SRR4302543.3824417/94‑1 (MQ=60)
                                              TTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGT                                             <  SRR4302543.4480531/94‑1 (MQ=60)
                                               TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG                                            <  SRR4302543.7321495/94‑1 (MQ=60)
                                                 GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA                                          >  SRR4302543.7227412/1‑94 (MQ=60)
                                                 GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA                                          <  SRR4302543.6693282/94‑1 (MQ=60)
                                                 GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA                                          >  SRR4302543.3622136/1‑94 (MQ=60)
                                                  ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC                                         >  SRR4302543.435371/1‑94 (MQ=60)
                                                  ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC                                         <  SRR4302543.5602384/94‑1 (MQ=60)
                                                  ATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC                                         <  SRR4302543.6510395/94‑1 (MQ=60)
                                                   TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC                                        <  SRR4302543.3275871/94‑1 (MQ=60)
                                                   TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC                                        <  SRR4302543.3872745/94‑1 (MQ=60)
                                                    TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT                                       >  SRR4302543.1926672/1‑94 (MQ=60)
                                                     GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG                                      >  SRR4302543.464429/1‑94 (MQ=60)
                                                     GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG                                      >  SRR4302543.7677954/1‑94 (MQ=60)
                                                      ACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGCCTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGC                                     >  SRR4302543.4618900/1‑94 (MQ=60)
                                                      ACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGC                                     <  SRR4302543.7812411/94‑1 (MQ=60)
                                                      ACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGC                                     >  SRR4302543.5941932/1‑94 (MQ=60)
                                                       CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA                                    >  SRR4302543.2229559/1‑94 (MQ=60)
                                                       CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA                                    >  SRR4302543.4478483/1‑94 (MQ=60)
                                                        TTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAT                                   <  SRR4302543.2439638/94‑1 (MQ=60)
                                                        TTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAT                                   <  SRR4302543.1324377/94‑1 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                  <  SRR4302543.2413898/94‑1 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                  >  SRR4302543.5352567/1‑94 (MQ=60)
                                                          GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                 <  SRR4302543.582432/94‑1 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC                                >  SRR4302543.3954793/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC                                >  SRR4302543.5298567/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC                                <  SRR4302543.4647340/94‑1 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAATTACAGCCCCGAAGGACTGGAAGGCTCAACCCAGCAAATCAATCCGAGGGTGTGCACCTGCAATTCC                               >  SRR4302543.3954794/1‑94 (MQ=48)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCG                               >  SRR4302543.5445852/1‑94 (MQ=60)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC                               >  SRR4302543.2174671/1‑94 (MQ=60)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC                               >  SRR4302543.5908502/1‑94 (MQ=60)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC                               <  SRR4302543.1351640/94‑1 (MQ=60)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC                               >  SRR4302543.4797763/1‑94 (MQ=60)
                                                              TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG                             >  SRR4302543.6765355/1‑94 (MQ=60)
                                                              TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG                             <  SRR4302543.884403/94‑1 (MQ=60)
                                                               ATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGG                            <  SRR4302543.1373724/94‑1 (MQ=60)
                                                               ATCTTCGTGCTCCGAACAAAAAAATTCCAGCCCCGAAGGATGGGAAGGCTCAATCGAGCAAATCAAGCAGAGGATGTGCACTTGCATTGCCGGG                            >  SRR4302543.7068494/1‑94 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                           <  SRR4302543.6665435/94‑1 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                           <  SRR4302543.4126023/94‑1 (MQ=60)
                                                                 CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC                          >  SRR4302543.6392874/1‑94 (MQ=60)
                                                                 CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC                          >  SRR4302543.2901762/1‑94 (MQ=60)
                                                                 CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC                          >  SRR4302543.1201369/1‑94 (MQ=60)
                                                                 CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAAGTGCACCTGCATTTCCGGGTC                          >  SRR4302543.4796523/1‑94 (MQ=60)
                                                                 CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAGCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC                          >  SRR4302543.6093144/1‑94 (MQ=60)
                                                                   TCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTT                        <  SRR4302543.6020811/94‑1 (MQ=60)
                                                                    CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT                       <  SRR4302543.1036107/94‑1 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                      >  SRR4302543.3750317/1‑94 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                      >  SRR4302543.3750318/1‑94 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                      <  SRR4302543.2764703/94‑1 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                      >  SRR4302543.3590718/1‑94 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                      <  SRR4302543.266912/94‑1 (MQ=60)
                                                                       TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG                    >  SRR4302543.495063/1‑94 (MQ=60)
                                                                       TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG                    <  SRR4302543.7849765/94‑1 (MQ=60)
                                                                       TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG                    >  SRR4302543.2786257/1‑94 (MQ=60)
                                                                        CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA                   >  SRR4302543.3403070/1‑94 (MQ=60)
                                                                        CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA                   >  SRR4302543.5816485/1‑94 (MQ=60)
                                                                        CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA                   >  SRR4302543.7649775/1‑94 (MQ=60)
                                                                        CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA                   >  SRR4302543.7163563/1‑94 (MQ=60)
                                                                        CTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGA                   >  SRR4302543.6259441/1‑94 (MQ=60)
                                                                          CCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATC                 >  SRR4302543.161243/1‑94 (MQ=60)
                                                                          CCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATC                 <  SRR4302543.4172234/94‑1 (MQ=60)
                                                                           CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC                >  SRR4302543.2252730/1‑94 (MQ=60)
                                                                           CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC                >  SRR4302543.3283712/1‑94 (MQ=60)
                                                                            GAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGTTGTGCACCTGCATTTCCGGGTCTTTGCGATCCA               >  SRR4302543.7677084/1‑94 (MQ=60)
                                                                            GAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCA               >  SRR4302543.1392107/1‑94 (MQ=60)
                                                                            GAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCA               <  SRR4302543.2107341/94‑1 (MQ=60)
                                                                            AAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCA               <  SRR4302543.2497198/94‑1 (MQ=60)
                                                                             AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG              <  SRR4302543.5595565/94‑1 (MQ=60)
                                                                             AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG              <  SRR4302543.4140953/94‑1 (MQ=60)
                                                                             AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG              <  SRR4302543.4445340/94‑1 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT            >  SRR4302543.2265161/1‑94 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGAACCTGCATTTCCGGGTCTTTGCGATCCAGCT            >  SRR4302543.5938560/1‑94 (MQ=60)
                                                                                AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA           <  SRR4302543.563447/94‑1 (MQ=60)
                                                                                AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA           <  SRR4302543.7717388/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGATTGGAAGGCTCAATCCATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG          <  SRR4302543.3597621/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGCTAG          >  SRR4302543.7371451/1‑94 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG          <  SRR4302543.3136100/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG          <  SRR4302543.5386482/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG          <  SRR4302543.3843672/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG          <  SRR4302543.3843671/94‑1 (MQ=60)
                                                                                    AAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGG       <  SRR4302543.5844208/94‑1 (MQ=60)
                                                                                     AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA      >  SRR4302543.322851/1‑94 (MQ=60)
                                                                                     AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA      <  SRR4302543.6288456/94‑1 (MQ=60)
                                                                                     AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGAACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA      >  SRR4302543.1135557/1‑94 (MQ=60)
                                                                                       TTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATG    <  SRR4302543.4333830/94‑1 (MQ=60)
                                                                                        TCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGACTTTGCGATCCAGATAGTGGATGG   >  SRR4302543.3399895/1‑94 (MQ=60)
                                                                                         CCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGC  >  SRR4302543.7542501/1‑94 (MQ=60)
                                                                                         CCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  SRR4302543.1453249/1‑94 (MQ=60)
                                                                                         CCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  <  SRR4302543.5569190/94‑1 (MQ=60)
                                                                                             |                                                                                         
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112020‑4112202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: