Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,575 |
T→C |
T115T (ACA→ACG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,575 | 0 | T | C | 99.5%
| 664.6
/ NA
| 210 | T115T (ACA→ACG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (111/98); minor base G (1/0); total (112/98) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 214 total aligned reads displayed.
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120485‑4120664
|
cGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGgcgt < 1:263406/93‑1 (MQ=255)
cGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGgcgt > 1:2080668/1‑93 (MQ=255)
cGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGgcgt > 2:1364247/1‑93 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa > 1:2275789/1‑93 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa < 2:3729320/93‑1 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa > 1:3972371/1‑93 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa < 2:1566297/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt > 2:4201447/1‑93 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt < 2:396155/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt > 1:1210011/1‑93 (MQ=255)
gTTCATTCCACGGAACTTGAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGtt < 2:1133149/93‑1 (MQ=255)
cATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCt < 2:4662281/93‑1 (MQ=255)
aTTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCGTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTc < 2:2124661/93‑1 (MQ=255)
aTTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTc > 1:1504255/1‑93 (MQ=255)
ccACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCgg > 2:1645928/1‑93 (MQ=255)
ccACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCgg < 2:2224717/93‑1 (MQ=255)
ccGGAACTTCAACCAGCTGCGTTGGCTGCTGGCTCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCg < 1:3499321/92‑1 (MQ=255)
aCGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCg > 2:4536195/1‑93 (MQ=255)
aCGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGACTGCATTTGTTCAAGAAGCTGAAGTTGTTCTGGCGTCAGTTGCTCCGGCg > 2:3796723/1‑93 (MQ=255)
ggAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGtt > 1:1086247/1‑93 (MQ=255)
aCTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttc > 2:122673/1‑93 (MQ=255)
cTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttca < 2:3940214/93‑1 (MQ=255)
cTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttca < 2:1937054/93‑1 (MQ=255)
ttCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcac > 1:2228412/1‑93 (MQ=255)
ttCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcac > 1:4492103/1‑93 (MQ=255)
tCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcact < 2:4565167/93‑1 (MQ=255)
tccAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGAAGTTGTTCTGGGGTCAGTTGCTCCGGCCCTttcacttca > 2:1817256/2‑93 (MQ=255)
aCCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttca > 1:4380834/1‑93 (MQ=255)
ccAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttcac > 1:3255044/1‑93 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcaccac > 2:4655686/1‑93 (MQ=255)
cTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCaccacc < 1:1103484/93‑1 (MQ=255)
ttGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAg > 2:2303592/1‑93 (MQ=255)
gctgctGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAg < 2:740288/93‑1 (MQ=255)
tgctgGCGCATATGAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGt < 1:4628150/93‑1 (MQ=255)
tgctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGt < 2:1739717/93‑1 (MQ=255)
ctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTc < 1:63999/93‑1 (MQ=255)
gcgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgt < 1:1345800/93‑1 (MQ=255)
gcgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgt < 1:118350/93‑1 (MQ=255)
cgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgtg < 2:960428/93‑1 (MQ=255)
gcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTgg < 1:4554324/93‑1 (MQ=255)
cATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTggg > 2:590121/1‑93 (MQ=255)
cATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTggg > 2:3437269/1‑93 (MQ=255)
cATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTggg > 1:1543466/1‑93 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc > 1:1469093/1‑93 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc > 2:1081220/1‑93 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc < 2:1297593/93‑1 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg > 1:1000521/1‑93 (MQ=255)
atCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcgc > 2:3526882/1‑93 (MQ=255)
cAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcac < 1:3829215/93‑1 (MQ=255)
gCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgc > 1:1804661/1‑93 (MQ=255)
gCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgc > 1:1154725/1‑93 (MQ=255)
ccTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgca > 2:680054/1‑93 (MQ=255)
ccTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgca < 1:220504/93‑1 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 1:4269865/1‑93 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 1:3420336/1‑93 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 1:1769425/1‑93 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 2:4511984/1‑93 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac < 1:2781476/93‑1 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 2:4105528/1‑93 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 2:4333366/1‑93 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt < 2:275593/93‑1 (MQ=255)
gCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTc > 1:1976231/1‑93 (MQ=255)
cATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTcc < 1:3322693/93‑1 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 2:2850553/1‑93 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 1:2383758/1‑93 (MQ=255)
tttGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCg > 1:4297162/1‑93 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTg < 2:2721556/93‑1 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTg > 2:2914823/1‑93 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTg > 2:2398443/1‑93 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc > 2:2025554/1‑93 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc < 1:618217/93‑1 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc < 2:1407786/93‑1 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc < 2:3568358/93‑1 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc < 2:3710464/93‑1 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc < 2:3909492/93‑1 (MQ=255)
agaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCCGCTGGCgg > 1:461968/1‑92 (MQ=255)
gaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGAc > 2:4057560/1‑93 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACtt < 1:3070613/93‑1 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACtt > 1:944501/1‑93 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGAGGGCGCACGCACTCCCGGCTGGCGACtt > 1:3589554/1‑93 (MQ=255)
gCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACttt > 2:4001153/1‑93 (MQ=255)
gCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACttt < 2:55130/93‑1 (MQ=255)
cTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTc < 1:2424686/93‑1 (MQ=255)
cTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTc < 1:1199733/93‑1 (MQ=255)
tGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTcc > 1:3315520/1‑93 (MQ=255)
tGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTcc < 2:836171/93‑1 (MQ=255)
gACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCa > 1:3161444/1‑93 (MQ=255)
gACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCa < 1:4178933/93‑1 (MQ=255)
gACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCa > 1:1422665/1‑93 (MQ=255)
gACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCa < 1:4047294/93‑1 (MQ=255)
aCGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAg > 1:818490/1‑93 (MQ=255)
cGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGc < 1:2998235/93‑1 (MQ=255)
cGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGc < 1:2882533/93‑1 (MQ=255)
cGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGc > 2:3613605/1‑93 (MQ=255)
cGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGGTCTGTGGGCGCACGCACTCCCGGCTGGCGGCTTTCCAGc > 2:1245333/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGATCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc > 2:888635/1‑93 (MQ=255)
tgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGGTCTGTGGGCGCACGCACTCCCGGCTGGCGACCTTGCAGctct > 2:3635421/1‑93 (MQ=255)
gttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCtt < 1:1624973/93‑1 (MQ=255)
tGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAt > 2:3226210/1‑93 (MQ=255)
tGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAt < 2:2531630/93‑1 (MQ=255)
|
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120485‑4120664
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120482‑4120668
|
CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGGTGTTCTGGC > SRR4302535.1443893/1‑94 (MQ=60)
GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCG > SRR4302535.2602837/1‑94 (MQ=60)
GCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGT > SRR4302535.2095659/1‑94 (MQ=60)
GCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGT < SRR4302535.4052822/94‑1 (MQ=60)
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTC < SRR4302535.265233/94‑1 (MQ=60)
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCA < SRR4302535.2873813/94‑1 (MQ=60)
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCA > SRR4302535.2292035/1‑94 (MQ=60)
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCA > SRR4302535.3999505/1‑94 (MQ=60)
CTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGT > SRR4302535.1218704/1‑94 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT > SRR4302535.1892958/1‑94 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT < SRR4302535.4001223/94‑1 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC < SRR4302535.2918763/94‑1 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC < SRR4302535.3341850/94‑1 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC > SRR4302535.137836/1‑94 (MQ=60)
TCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCT < SRR4302535.1097710/94‑1 (MQ=60)
CATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTC > SRR4302535.1515074/1‑94 (MQ=60)
ATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCC > SRR4302535.193357/1‑94 (MQ=60)
TCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGG < SRR4302535.2273292/94‑1 (MQ=60)
CCGGAACTTCAACCAGCTGCGTTGGCTGCTGGCTCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGT < SRR4302535.3523650/94‑1 (MQ=60)
ACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGT > SRR4302535.1578400/1‑94 (MQ=60)
CGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTT > SRR4302535.1093969/1‑94 (MQ=60)
CTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCAC > SRR4302535.4522938/1‑94 (MQ=60)
CTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCAC > SRR4302535.2244263/1‑94 (MQ=60)
TTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACT > SRR4302535.4125080/1‑94 (MQ=60)
AACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCA > SRR4302535.4410807/1‑94 (MQ=60)
ACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCAC > SRR4302535.3277659/1‑94 (MQ=60)
CAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCA < SRR4302535.1479282/94‑1 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG > SRR4302535.3582044/1‑94 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG < SRR4302535.1130935/94‑1 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG < SRR4302535.1111366/94‑1 (MQ=60)
TGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGG < SRR4302535.1701063/94‑1 (MQ=60)
CGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCA > SRR4302535.4049494/1‑94 (MQ=60)
CGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCA > SRR4302535.73322/1‑94 (MQ=60)
GTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAG > SRR4302535.3671471/1‑94 (MQ=60)
TGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAA < SRR4302535.3448405/94‑1 (MQ=60)
TGCTGGCGCATATGAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT < SRR4302535.4659564/94‑1 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT < SRR4302535.2726743/94‑1 (MQ=60)
GCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTC < SRR4302535.1017803/94‑1 (MQ=60)
GCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTC > SRR4302535.140423/1‑94 (MQ=60)
CTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCT < SRR4302535.64481/94‑1 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302535.1355409/94‑1 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302535.119180/94‑1 (MQ=60)
GCATATCAGCCTGCTTGTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGG < SRR4302535.1486252/94‑1 (MQ=60)
GCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGG > SRR4302535.1554588/1‑94 (MQ=60)
GCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGG < SRR4302535.4585437/94‑1 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC < SRR4302535.125464/94‑1 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC > SRR4302535.4331992/1‑94 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC > SRR4302535.1479617/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302535.1007632/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302535.2000263/1‑94 (MQ=60)
TATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGC > SRR4302535.2102231/1‑94 (MQ=60)
CAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACG < SRR4302535.3224404/94‑1 (MQ=60)
CAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACG < SRR4302535.3855626/94‑1 (MQ=60)
AGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGC > SRR4302535.1162979/1‑94 (MQ=60)
AGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGC < SRR4302535.1533529/94‑1 (MQ=60)
AGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGC > SRR4302535.1817703/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC > SRR4302535.3444125/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC > SRR4302535.4299099/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC < SRR4302535.222025/94‑1 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC < SRR4302535.642817/94‑1 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC > SRR4302535.1782253/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT < SRR4302535.4569332/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT < SRR4302535.2801278/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT < SRR4302535.1786693/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT < SRR4302535.1193800/94‑1 (MQ=60)
TGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTC > SRR4302535.1990462/1‑94 (MQ=60)
CATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCC < SRR4302535.3955603/94‑1 (MQ=60)
CATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCC > SRR4302535.2400875/1‑94 (MQ=60)
CATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCC < SRR4302535.4250854/94‑1 (MQ=60)
CATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCC < SRR4302535.3345810/94‑1 (MQ=60)
ATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCG > SRR4302535.4326570/1‑94 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT > SRR4302535.59006/1‑94 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT < SRR4302535.1208375/94‑1 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT < SRR4302535.3139951/94‑1 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG < SRR4302535.3347977/94‑1 (MQ=60)
TCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGC > SRR4302535.2326086/1‑94 (MQ=60)
TCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGGTCTGTGGGCGCACGCACTCCCGGCTGGC > SRR4302535.4605784/1‑94 (MQ=60)
CAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCG > SRR4302535.2629961/1‑94 (MQ=60)
CAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCG < SRR4302535.622515/94‑1 (MQ=60)
CAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCG > SRR4302535.2226810/1‑94 (MQ=60)
AAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCCGCTGGCGG > SRR4302535.465196/1‑94 (MQ=60)
AGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGAC > SRR4302535.4321745/1‑94 (MQ=60)
GAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACT < SRR4302535.3300819/94‑1 (MQ=60)
AAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTT > SRR4302535.951189/1‑94 (MQ=60)
AAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTT < SRR4302535.2602920/94‑1 (MQ=60)
AAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGAGGGCGCACGCACTCCCGGCTGGCGACTT > SRR4302535.3614455/1‑94 (MQ=60)
AAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGGTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCCGGCGACTT > SRR4302535.2418557/1‑94 (MQ=60)
AGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTT < SRR4302535.999372/94‑1 (MQ=60)
AGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTT < SRR4302535.3092056/94‑1 (MQ=60)
CTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCC < SRR4302535.1208331/94‑1 (MQ=60)
CTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCC < SRR4302535.2442157/94‑1 (MQ=60)
CTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCC > SRR4302535.3338589/1‑94 (MQ=60)
TGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCA > SRR4302535.1432822/1‑94 (MQ=60)
TGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCA > SRR4302535.3183374/1‑94 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG < SRR4302535.4074999/94‑1 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG > SRR4302535.824234/1‑94 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG > SRR4302535.4598112/1‑94 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG < SRR4302535.4207536/94‑1 (MQ=60)
CGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCT < SRR4302535.2902934/94‑1 (MQ=60)
CGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCT < SRR4302535.3019260/94‑1 (MQ=60)
GTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTC > SRR4302535.4508300/1‑94 (MQ=60)
GTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTT < SRR4302535.1636706/94‑1 (MQ=60)
TTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTA > SRR4302535.908216/1‑94 (MQ=60)
TTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTA < SRR4302535.4653743/94‑1 (MQ=60)
TTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTATGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTA < SRR4302535.3323636/94‑1 (MQ=60)
CTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT < SRR4302535.3024199/94‑1 (MQ=60)
TGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATG < SRR4302535.1178854/94‑1 (MQ=60)
GGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGT > SRR4302535.3865200/1‑94 (MQ=60)
GGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGT < SRR4302535.3656748/94‑1 (MQ=60)
GGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGT < SRR4302535.2180463/94‑1 (MQ=60)
GCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTA > SRR4302535.548061/1‑94 (MQ=60)
GCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTA < SRR4302535.4634910/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG < SRR4302535.2075729/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > SRR4302535.2270136/1‑94 (MQ=60)
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CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120482‑4120668
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
