Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,203,198 |
Δ1 bp |
coding (312/1290 nt) |
purD ← |
phosphoribosylglycinamide synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,203,195 | 0 | T | . | 95.3%
| 449.9
/ 12.6
| 107 | coding (315/1290 nt) | purD | phosphoribosylglycinamide synthetase |
| Reads supporting (aligned to +/- strand): ref base T (5/0); new base . (46/56); total (51/56) |
| Fisher's exact test for biased strand distribution p-value = 2.21e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
Only 100 of 163 total aligned reads displayed.
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
cGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCt < 1:3566920/93‑1 (MQ=255)
gATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAAACTTTTGTAAAAGCtttga > 2:1315299/1‑91 (MQ=255)
gATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCtttga < 1:2921125/93‑3 (MQ=255)
gATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCtttga < 1:4270271/93‑3 (MQ=255)
cGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCt < 2:3336224/93‑1 (MQ=255)
cAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAAACTTTTGTAAAAGC‑TTTGAGACTTcc > 2:3475438/1‑93 (MQ=255)
aGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAAGC‑TTTGTGCCTTccc > 2:1889962/1‑92 (MQ=255)
aGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCa < 1:2764817/93‑1 (MQ=255)
gcgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAg > 2:2255016/1‑93 (MQ=255)
gcgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAg < 1:2228417/93‑1 (MQ=255)
gcgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAAGGAATCTTTGGTAAACGC‑TTTGAGACTTcccg > 2:2255015/1‑91 (MQ=255)
cgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATATTTTGTTAACGC‑TTTGAGCCTTCCCGt > 1:62651/1‑93 (MQ=255)
cgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAAACTTTTGTAAACGCTTTT‑AGGCTTCCCGt > 1:2041475/1‑93 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAAAT‑TTTGGTAAAAGCTTTTGGGCTTCCCatt > 1:3282856/1‑91 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCATTCGTAAACGC‑TTTGAGCCTTTCAGtt > 2:1744483/1‑93 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGtt < 2:1316998/93‑1 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTGCCAGtt < 2:2552497/93‑1 (MQ=255)
cAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTg < 1:1696689/93‑1 (MQ=255)
cAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTg < 2:3801234/93‑1 (MQ=255)
aGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTgg < 2:4338734/93‑1 (MQ=255)
aGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTgg < 2:4469796/93‑1 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAATCTTTGGTAAACGC‑TTTGAGCCTTTCCGTTggg > 2:1491673/1‑93 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCGGAAATCTTTGGTGAACGC‑TTTGAGACCTCCAGTTggg > 2:3856801/1‑93 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTGGTAAAAGCTTTT‑AGCCTTCCCGTTggg > 2:3424733/1‑93 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGGCTTCCAGTTtgg > 2:1885581/1‑93 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAAAGCTTTT‑AGCCCTCCCGTTggg > 2:3238697/1‑93 (MQ=255)
gTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGc < 1:4641058/93‑1 (MQ=255)
gTTCTACCCCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGGGCCGTCCAGTTGGGc < 2:1619981/93‑1 (MQ=255)
ttCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGcc < 2:1425226/93‑1 (MQ=255)
ccTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAAACTTTTGTAAACGC‑TTTGAGGCTTCCAGTTGGGGCGcccc > 2:3099674/1‑93 (MQ=255)
ccTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCTTCCACTTGGGCCGCAcc > 1:1655517/1‑93 (MQ=255)
ccTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCAcc < 1:2361787/93‑1 (MQ=255)
ccTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCAcc < 2:806606/93‑1 (MQ=255)
cTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAAACTTTTGTAAAAGCTTTT‑TGCCTTCCCGTTTGGGCGCAccc > 2:113496/1‑92 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTg < 2:1215811/93‑1 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTg > 1:4186709/1‑93 (MQ=255)
cGGTGAAGTTCTGGTATTCCGCCGTATGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGc < 1:753081/93‑1 (MQ=255)
tGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAAACTTTGGTAAAAGC‑TTTGAGCCTTCCCGTTGGGACGCACCTGCggg > 1:356665/1‑92 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGtt > 1:2102194/1‑93 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATCTTTTGTAAAAGC‑TTTGAGGCTTCCCGTTTGGCCGCCCCCGCGGtt > 1:2424179/1‑93 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAAACTTTGGGAAAAGCTTTT‑AGGCTTCCAGTTGGGCCGCCCCCGCgggt > 1:579467/1‑91 (MQ=255)
gAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGtt < 1:3192222/93‑1 (MQ=255)
gTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGGAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGGTggg > 2:3953737/1‑93 (MQ=255)
ttCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGGCTTCCAGTTTGGGCGCACCTGCCGTTGGGc > 2:2050391/1‑93 (MQ=255)
ttCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCCGCGGGTGGGc > 2:3496294/1‑93 (MQ=255)
cTGTTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCg < 2:2880481/93‑1 (MQ=255)
ggTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCGGAAAACTTTGGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCCGGGGTTGGGCCGaa > 2:4655256/1‑93 (MQ=255)
ggTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGaa < 2:3972804/93‑1 (MQ=255)
gTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAg < 1:1128099/93‑1 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGCTTTT‑AGCCTTCCAGTTGGGGCGCACCTGCGGGTGGGGCGAAGa > 2:68127/1‑93 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGgaga > 1:1391146/1‑93 (MQ=255)
ttCCGCCTTAGGGAGGTTAGGCC‑GGTCAAGGAATGCTTTGGTAAACGC‑TTTGAGCCTACAAGTTGGTCCGCACCTGCGGTTGGGCCGAAGAtt < 1:2571128/93‑1 (MQ=255)
ttCCGCCGTAGGGATCTTATGGC‑GGGCCCGGAAATCTTTGGTAAAAGC‑TTTGAGCCCTTCAGGTGGGGCGCACCTGCGGGTGGGGCGCAGAtt > 2:1387299/1‑93 (MQ=255)
tCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGAttt < 1:2304265/93‑1 (MQ=255)
ccgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGAtttt < 2:831273/93‑1 (MQ=255)
cgccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAACCTTTT‑AGACCTCCAGTTAGGCCGCACCTGCGGTTGGGCCGAATAttttt > 2:731372/1‑92 (MQ=255)
gccgTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGGTGGGCCGGAGAttttta > 2:1753762/1‑91 (MQ=255)
cgTAGGGATCTTATGGC‑GGGGCACGGAATCTTTGGTAAAAGCTTTTTGGCCTT‑CAGTTGGGGCGCACCCGCGGGTGGGGCGAAGAtttttcgc > 2:42334/1‑89 (MQ=255)
gATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGTTGGGGCGAAGATTTTTAGCCcggcg > 1:928909/1‑93 (MQ=255)
aTCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCCAAGATTTTTATCCcgggcg > 2:3551596/1‑90 (MQ=255)
ttATGGC‑GGGCCCGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGGTGGGCCGAAGATTTTTAGCCCGGCGgcgc > 2:1990407/1‑93 (MQ=255)
ttATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGCAGATTTTCAGCCCGGCGgcgc > 1:2572290/1‑93 (MQ=255)
tATGGC‑GGGCCAGGAAATCTTTTGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCCGTTGGGGCGAAGATTTTCAGCCCGGCGGcgcg > 2:1694881/1‑93 (MQ=255)
tATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCCGCGGcgcg > 2:535017/1‑93 (MQ=255)
tGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGGTTGGCCGAAGATTTTCAGCCCCGGGGCGCGGa > 2:2965079/1‑93 (MQ=255)
tGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTTAGCCCcgcggcgcggg > 2:24786/1‑92 (MQ=255)
tGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGa < 2:2191013/93‑1 (MQ=255)
tGGC‑GGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGGTTTTTCGCCCGGCGGCGCGGa > 2:1604737/1‑93 (MQ=255)
ggC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGaa > 2:1567124/1‑93 (MQ=255)
c‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAgg < 1:4398837/93‑1 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt > 1:2951755/1‑93 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt < 1:2319618/93‑1 (MQ=255)
gCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTAt < 2:596397/93‑1 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCg > 2:4546038/1‑93 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGGATCg > 2:4030699/1‑93 (MQ=255)
aGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGa > 1:1778555/1‑93 (MQ=255)
aGGAAATCTTTGGTAAACG‑TTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGa > 2:4547590/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 1:4482837/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 1:4433321/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 1:3797594/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc < 2:138458/93‑1 (MQ=255)
gAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAcc > 1:3199746/1‑93 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCa > 2:3620953/1‑93 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGGATCGAccc > 2:959638/1‑92 (MQ=255)
aaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAc > 1:3988462/1‑93 (MQ=255)
aaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAc > 2:1494253/1‑93 (MQ=255)
aTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTTGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACg > 1:774395/1‑93 (MQ=255)
aTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACg > 2:2765711/1‑93 (MQ=255)
aTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACg < 1:4279863/93‑1 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 1:1597040/1‑93 (MQ=255)
cTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGcc < 1:1401539/93‑1 (MQ=255)
tttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCt < 2:3739353/93‑1 (MQ=255)
tttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGACGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCt > 2:2064158/1‑93 (MQ=255)
ttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCtt < 2:2925177/93‑1 (MQ=255)
ggTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTGCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTc < 2:1152240/93‑1 (MQ=255)
tAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAc > 2:2750091/1‑93 (MQ=255)
tAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAc > 1:1808258/1‑93 (MQ=255)
tAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAc < 2:772721/93‑1 (MQ=255)
tAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAc > 1:1237278/1‑93 (MQ=255)
aaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCa > 2:2381561/1‑93 (MQ=255)
|
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203107‑4203291
|
GATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAG < SRR4302535.4299506/94‑1 (MQ=60)
GATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAG < SRR4302535.2941733/94‑1 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGATCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCA < SRR4302535.4559819/94‑1 (MQ=60)
AGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAG < SRR4302535.2784509/94‑1 (MQ=60)
GCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATATTTTGTTAACGC‑TTTGAGCCTTCCCGT > SRR4302535.63119/1‑94 (MQ=60)
GCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAAACTTTTGTAAACGCTTTTaggcttcccgt > SRR4302535.2056180/1‑83 (MQ=60)
GCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGT < SRR4302535.2244268/94‑1 (MQ=60)
CGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAAAT‑TTTGGTAAAAGCTTTTGggcttcccatt > SRR4302535.3305658/1‑83 (MQ=60)
CGCAGGTTCTACCTCGGTGAAGTTCTGGTATGCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTT < SRR4302535.737080/94‑1 (MQ=60)
GCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATCTTTTGTAAACGC‑TTTGAGGCTTCCCGTTG > SRR4302535.57624/1‑94 (MQ=60)
CAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGG < SRR4302535.1708953/94‑1 (MQ=60)
AGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCCTCCAGTTGGG > SRR4302535.1521539/1‑94 (MQ=60)
GGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCCGGGAATTTTTTGTAAACGCTTTTtgacctcccgttgggc > SRR4302535.1353686/1‑78 (MQ=60)
GTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAATCTTTTGTTAAAGC‑TTTGAGCCTTCCAGTTGGGGC > SRR4302535.2720892/1‑94 (MQ=60)
GTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCC < SRR4302535.4672522/94‑1 (MQ=60)
ACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCTTCCACTTGGGCCGCACC > SRR4302535.1667491/1‑94 (MQ=60)
CCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCT < SRR4302535.2378747/94‑1 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTG > SRR4302535.4215361/1‑94 (MQ=60)
CGGTGAAGTTCTGGTATTCCGCCGTATGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCG < SRR4302535.758382/94‑1 (MQ=60)
GTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAAACTTTGGTAAAAGC‑TTTGAGCCTTCCCGTTGGGACGCACCTGCGGG > SRR4302535.359130/1‑94 (MQ=60)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCCGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT > SRR4302535.2117356/1‑94 (MQ=60)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGGAATCTTTTGTAAAAGC‑TTTGAGGCTTCCCGTTTGGCCGCCCCCGCGGTT > SRR4302535.2441647/1‑94 (MQ=41)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGGCAGGAAAACTTTGGGAAAAGCTTTT‑AGGCTTCCAGTTGGGCCGCccccgcgggt > SRR4302535.583542/1‑84 (MQ=60)
TGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTT < SRR4302535.1727427/94‑1 (MQ=60)
GAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTG < SRR4302535.3214306/94‑1 (MQ=60)
TTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGTTGGGGC > SRR4302535.2391686/1‑94 (MQ=60)
GTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGGAGA > SRR4302535.1401076/1‑94 (MQ=60)
GTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGA < SRR4302535.1136153/94‑1 (MQ=60)
ATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGgtggggcggaggat > SRR4302535.1039460/1‑80 (MQ=60)
ATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGCCGCCCCTGCGGTTGGGGCGAAGATT > SRR4302535.2282978/1‑94 (MQ=60)
TTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGGAGATTT > SRR4302535.1650622/1‑94 (MQ=60)
ttccgccttagggaggttaggccggtcaaggaatgCTTTGGTAAACGC‑TTTGAGCCTACAAGTTGGTCCGCACCTGCGGTTGGGCCGAAGATTT < SRR4302535.2589611/59‑1 (MQ=42)
TCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTT > SRR4302535.2973211/1‑94 (MQ=60)
TCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTT < SRR4302535.2320744/94‑1 (MQ=60)
CGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCA < SRR4302535.91736/94‑1 (MQ=60)
CCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTTAGC > SRR4302535.1977619/1‑94 (MQ=60)
GTAGGGATCTTATGGC‑GGGGCAGGCAAATTTTGGGAAACGC‑TTTGAGCCTTCCAGTTTGGGCGCACCTGCGGGTGGGGCGAAGATTTTGATCCC > SRR4302535.2950369/1‑94 (MQ=26)
TAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCG < SRR4302535.2448403/94‑1 (MQ=60)
AGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGG < SRR4302535.4437382/94‑1 (MQ=60)
GGATCTTATGGC‑GGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGTTGGGGCGAAGATTTTTAGCCCGGCG > SRR4302535.935483/1‑94 (MQ=60)
GATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGG < SRR4302535.2946552/94‑1 (MQ=60)
GATCTTATGGC‑GGGCCAGGAAAACTTTGGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGGTTGGCCGAAGATTTTCAGCCCGGCGG > SRR4302535.1278666/1‑94 (MQ=60)
CTTATGGC‑GGGCCAGGAAATCTTTTGGAAACGCTTTT‑AGCCTTCCCGGTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGC > SRR4302535.15592/1‑94 (MQ=60)
CTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGCAGATTTTCAGCCCGGCGGCGC > SRR4302535.2590778/1‑94 (MQ=60)
C‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT > SRR4302535.2972491/1‑94 (MQ=60)
C‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT > SRR4302535.1332406/1‑94 (MQ=60)
C‑GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT < SRR4302535.4428944/94‑1 (MQ=60)
GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTA < SRR4302535.2336223/94‑1 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCG > SRR4302535.4354203/1‑94 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATAG > SRR4302535.3528048/1‑94 (MQ=60)
CAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGA > SRR4302535.1791433/1‑94 (MQ=60)
CAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGA > SRR4302535.21165/1‑94 (MQ=60)
AGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302535.4513603/1‑94 (MQ=60)
AGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302535.4463699/1‑94 (MQ=60)
AGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302535.3823772/1‑94 (MQ=60)
GGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACC > SRR4302535.3221900/1‑94 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC > SRR4302535.4015738/1‑94 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTTGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG > SRR4302535.779842/1‑94 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC > SRR4302535.1608558/1‑94 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC < SRR4302535.4309149/94‑1 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC > SRR4302535.3794988/1‑94 (MQ=60)
ATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGC > SRR4302535.3237666/1‑94 (MQ=60)
CTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCT < SRR4302535.1411542/94‑1 (MQ=60)
GTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAC > SRR4302535.1646890/1‑94 (MQ=60)
GTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAC > SRR4302535.1821346/1‑94 (MQ=60)
GTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAC > SRR4302535.2332085/1‑94 (MQ=60)
GTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAC > SRR4302535.1246114/1‑94 (MQ=60)
AAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCCAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA < SRR4302535.1393656/94‑1 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG > SRR4302535.4530632/1‑94 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG > SRR4302535.2019923/1‑94 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG > SRR4302535.1381658/1‑94 (MQ=60)
aacgctaTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG < SRR4302535.3056633/87‑1 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATAGACCACGCCTTTCACCAGC > SRR4302535.574015/1‑94 (MQ=60)
CTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGC < SRR4302535.1595529/94‑1 (MQ=60)
TGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT < SRR4302535.1731437/94‑1 (MQ=60)
TGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > SRR4302535.2316260/1‑94 (MQ=60)
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GATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGC‑GGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203107‑4203291
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
