Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,221,526 |
A→G |
E40E (GAA→GAG) |
metH → |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,221,526 | 0 | A | G | 100.0%
| 672.8
/ NA
| 214 | E40E (GAA→GAG) | metH | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/117); total (97/117) |
Only 100 of 228 total aligned reads displayed.
GCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGC > NC_000913/4221436‑4221615
|
cAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAgcgc < 2:1314822/93‑1 (MQ=255)
cAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAgcgc < 1:372040/93‑1 (MQ=255)
cAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAgcgc > 1:3607414/1‑93 (MQ=255)
aGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCt > 1:4191642/1‑93 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCtt < 2:1538437/93‑1 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCtt > 2:2822734/1‑93 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCtt > 2:4138746/1‑93 (MQ=255)
ttAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCttt < 1:1406882/93‑1 (MQ=255)
ttAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCttt > 1:967936/1‑93 (MQ=255)
ttAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGGTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCttt > 2:1684910/1‑93 (MQ=255)
aaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGcc < 2:3413824/93‑1 (MQ=255)
aaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGcc > 1:1544362/1‑93 (MQ=255)
aaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGcc < 2:758647/93‑1 (MQ=255)
aaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCAGGAGTTATCGACTGACCGAAGCCGATTTTCGTGGTGAGCGCTTTGcc < 2:4281154/93‑1 (MQ=255)
tGAACGTATTCTGGTGCTGGACGGCGTTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGa < 1:95698/93‑1 (MQ=255)
tGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGa < 1:1893297/93‑1 (MQ=255)
gAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGAc < 2:1296208/93‑1 (MQ=255)
aaCGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACt > 1:3797431/1‑93 (MQ=255)
gTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGc < 1:1570971/93‑1 (MQ=255)
aTTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCa < 2:1028175/93‑1 (MQ=255)
aTTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCGTTACCGACTGGCCa > 2:2727925/1‑93 (MQ=255)
ttCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAt < 2:2125317/93‑1 (MQ=255)
ttCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAt > 1:3453946/1‑93 (MQ=255)
tCTGGTGCTGGACGGCGTTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATg < 2:1362204/93‑1 (MQ=255)
tCTGGTGCTGGACGGCGGTATGGGCACCAGGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATg < 2:2179847/93‑1 (MQ=255)
cTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGc > 1:1290569/1‑93 (MQ=255)
cTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGc < 1:1931509/93‑1 (MQ=255)
ggTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGa < 2:3043635/93‑1 (MQ=255)
tGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGAcc > 2:1395828/1‑93 (MQ=255)
tGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGAcc > 1:2460822/1‑93 (MQ=255)
gCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCt < 1:4462460/93‑1 (MQ=255)
gCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCt < 2:4214134/93‑1 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCaaa < 1:3821375/93‑1 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCaaa < 1:722392/93‑1 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCaaa < 2:2606170/93‑1 (MQ=255)
aCGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAg > 1:3932548/1‑93 (MQ=255)
aCGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAg < 2:2038676/93‑1 (MQ=255)
cggcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGGCTGGCCATGCGACCTCAAAgg > 2:2270622/1‑93 (MQ=255)
cggcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAgg < 1:2791990/93‑1 (MQ=255)
cggcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAgg > 1:1659366/1‑93 (MQ=255)
gcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGca < 2:3975237/93‑1 (MQ=255)
cggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaa < 1:2049157/93‑1 (MQ=255)
ggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaac < 1:2680692/93‑1 (MQ=255)
gTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaaca > 1:471645/1‑93 (MQ=255)
tATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaacaa > 1:3368035/1‑93 (MQ=255)
tATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaacaa < 1:1770410/93‑1 (MQ=255)
tATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaacaa > 1:2807653/1‑93 (MQ=255)
tATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaacaa < 2:426952/93‑1 (MQ=255)
tATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaacaa < 2:35230/93‑1 (MQ=255)
tGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGTCCTCAAAGGCAACAACg > 2:2323807/1‑93 (MQ=255)
ggCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAc < 1:4158567/93‑1 (MQ=255)
ggCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAc > 1:3061562/1‑93 (MQ=255)
ggCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAc < 2:4155751/93‑1 (MQ=255)
ggCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAc < 1:2755537/93‑1 (MQ=255)
cACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACct < 1:2395672/93‑1 (MQ=255)
aCCATGATCAAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGGAAGGGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctg > 2:4557675/1‑93 (MQ=255)
ccATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgc > 2:646829/1‑93 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct > 2:3847979/1‑93 (MQ=255)
aTGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgctg > 2:3400838/1‑93 (MQ=255)
aTGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGGGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgctg < 1:644279/93‑1 (MQ=255)
tCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTAc > 2:335208/1‑93 (MQ=255)
ccAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACt > 1:562828/1‑93 (MQ=255)
gagTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAg > 1:708970/1‑93 (MQ=255)
gTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTa > 2:1241632/1‑93 (MQ=255)
ttATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaa < 1:3215570/93‑1 (MQ=255)
ttATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaa < 1:4386130/93‑1 (MQ=255)
ttATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaa < 2:2575574/93‑1 (MQ=255)
tATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaaa > 2:4487466/1‑93 (MQ=255)
tATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaaa < 2:2486552/93‑1 (MQ=255)
tCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAAcc < 1:3259127/93‑1 (MQ=255)
tCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACATGCTGGTACTCAGTAAAcc > 1:899078/1‑93 (MQ=255)
cGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCg < 2:1932878/93‑1 (MQ=255)
cGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAAACAACAACGACCTGCTGGTACTCAGTAAACCg > 2:1194244/1‑93 (MQ=255)
cTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGaa > 1:1045039/1‑93 (MQ=255)
cTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGaa < 1:2937853/93‑1 (MQ=255)
tGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAg > 2:540422/1‑93 (MQ=255)
tGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAg < 1:2260250/93‑1 (MQ=255)
tGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAg < 2:3141572/93‑1 (MQ=255)
tGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAg < 1:2350501/93‑1 (MQ=255)
aCGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGa < 1:4257705/93‑1 (MQ=255)
aCGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGa > 2:3612208/1‑93 (MQ=255)
cGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAt < 1:3493688/93‑1 (MQ=255)
cGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAAAAACGACCTGCTGGTACTCAGTAAACCGGAAGTGag > 1:593958/1‑92 (MQ=255)
gAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAACGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATc < 1:2506223/93‑1 (MQ=255)
gCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgcc > 1:2120837/1‑93 (MQ=255)
ccGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgccg > 2:2215841/1‑93 (MQ=255)
cGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgccgc > 1:4333377/1‑93 (MQ=255)
cGATTTTCGTGGTGAGCCCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgccgc < 2:3688300/93‑1 (MQ=255)
gATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCt > 2:2953281/1‑93 (MQ=255)
aTTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTa > 1:3431789/1‑93 (MQ=255)
aTTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTa < 2:4446702/93‑1 (MQ=255)
ttttCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTac > 1:1007765/1‑92 (MQ=255)
ttttCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAt > 1:2969509/1‑93 (MQ=255)
ttttCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAt > 2:1742403/1‑93 (MQ=255)
cGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCcac < 1:3293151/93‑1 (MQ=255)
gtggtgAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCcaca > 1:2617927/1‑93 (MQ=255)
tggtgAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTATACCGGAAGTGATCGCCGCTATCcacac > 2:2219744/1‑92 (MQ=255)
tggtgAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACaa < 2:835718/93‑1 (MQ=255)
tggtgAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACaa < 2:4090799/93‑1 (MQ=255)
tgAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGc < 1:4064086/93‑1 (MQ=255)
|
GCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGC > NC_000913/4221436‑4221615
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCCTAC > NC_000913/4221433‑4221619
|
TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAG < SRR4302535.4539249/94‑1 (MQ=60)
GCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGC < SRR4302535.659709/94‑1 (MQ=60)
GCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGC < SRR4302535.2869372/94‑1 (MQ=60)
CGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCG > SRR4302535.1953130/1‑94 (MQ=60)
CGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCG < SRR4302535.774071/94‑1 (MQ=60)
GCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGC > SRR4302535.3632434/1‑94 (MQ=60)
GCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGC > SRR4302535.547531/1‑94 (MQ=60)
CAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCT < SRR4302535.374615/94‑1 (MQ=60)
CAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCT > SRR4302535.4220327/1‑94 (MQ=60)
CAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGAACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCT > SRR4302535.2814922/1‑94 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTT > SRR4302535.974815/1‑94 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTT < SRR4302535.3437790/94‑1 (MQ=60)
TTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTG < SRR4302535.1416935/94‑1 (MQ=60)
TAAATGAACGTATTCTGGTGCTGGACGGCGGGATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGCGAGCGCTTTGC > SRR4302535.1891819/1‑94 (MQ=60)
AAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCC > SRR4302535.1555487/1‑94 (MQ=60)
AATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCG < SRR4302535.4637419/94‑1 (MQ=60)
AATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCG > SRR4302535.710788/1‑94 (MQ=60)
TGAACGTATTCTGTTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGAC < SRR4302535.949667/94‑1 (MQ=60)
TGAACGTATTCTGGTGCTGGACGGCGTTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGAC < SRR4302535.96378/94‑1 (MQ=60)
TGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGAC > SRR4302535.2643651/1‑94 (MQ=60)
TGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGAC < SRR4302535.1906929/94‑1 (MQ=60)
GAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACT > SRR4302535.3823609/1‑94 (MQ=60)
ACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGCGCGCTTTGCCGACTGG > SRR4302535.2428061/1‑94 (MQ=60)
CGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGC > SRR4302535.3295628/1‑94 (MQ=60)
GTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCC < SRR4302535.1582312/94‑1 (MQ=60)
TATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCA < SRR4302535.96531/94‑1 (MQ=60)
TATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCA > SRR4302535.1223353/1‑94 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAT > SRR4302535.3477955/1‑94 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAT > SRR4302535.2440233/1‑94 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAT > SRR4302535.4106496/1‑94 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCAT > SRR4302535.3791763/1‑94 (MQ=60)
TTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATG > SRR4302535.2503650/1‑94 (MQ=60)
TCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGC > SRR4302535.2829061/1‑94 (MQ=60)
TCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGC > SRR4302535.1299769/1‑94 (MQ=60)
CTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCG > SRR4302535.2278137/1‑94 (MQ=60)
CTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCG < SRR4302535.835610/94‑1 (MQ=60)
CTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCG < SRR4302535.1945428/94‑1 (MQ=60)
TGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGA > SRR4302535.326541/1‑94 (MQ=60)
GTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACC > SRR4302535.2478562/1‑94 (MQ=60)
GTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACC > SRR4302535.617805/1‑94 (MQ=60)
TGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCT < SRR4302535.576323/94‑1 (MQ=60)
TGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCT < SRR4302535.2661579/94‑1 (MQ=60)
TGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCT > SRR4302535.3691634/1‑94 (MQ=60)
GCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTC < SRR4302535.4493065/94‑1 (MQ=60)
GACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAG > SRR4302535.3959390/1‑94 (MQ=60)
GACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAG < SRR4302535.727464/94‑1 (MQ=60)
GACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAG < SRR4302535.2115124/94‑1 (MQ=60)
GACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAG < SRR4302535.3847739/94‑1 (MQ=60)
ACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGG > SRR4302535.1671361/1‑94 (MQ=60)
CGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGC < SRR4302535.2811858/94‑1 (MQ=60)
GGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGGCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCA > SRR4302535.2528088/1‑94 (MQ=60)
GGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCA < SRR4302535.1571358/94‑1 (MQ=60)
CGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAAC < SRR4302535.2063910/94‑1 (MQ=60)
CGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAAC > SRR4302535.4486396/1‑94 (MQ=60)
GGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACA > SRR4302535.474945/1‑94 (MQ=60)
GGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACA < SRR4302535.2699871/94‑1 (MQ=60)
GTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAA > SRR4302535.2827610/1‑94 (MQ=60)
GTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAA > SRR4302535.3391470/1‑94 (MQ=60)
TATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC < SRR4302535.4402510/94‑1 (MQ=60)
TATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC < SRR4302535.1783240/94‑1 (MQ=60)
TATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC < SRR4302535.1697047/94‑1 (MQ=60)
TATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC > SRR4302535.3012446/1‑94 (MQ=60)
ATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACG < SRR4302535.2378354/94‑1 (MQ=60)
TGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGA < SRR4302535.4444880/94‑1 (MQ=60)
GGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAC > SRR4302535.3082971/1‑94 (MQ=60)
GGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACC < SRR4302535.884905/94‑1 (MQ=60)
GGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACC < SRR4302535.2775177/94‑1 (MQ=60)
GGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACC < SRR4302535.4187032/94‑1 (MQ=60)
GCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCT < SRR4302535.3341677/94‑1 (MQ=60)
CACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTG < SRR4302535.3849172/94‑1 (MQ=60)
CACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTG < SRR4302535.2412890/94‑1 (MQ=60)
CCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCT < SRR4302535.2928846/94‑1 (MQ=60)
CATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTG > SRR4302535.3207030/1‑94 (MQ=60)
ATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGG < SRR4302535.3459719/94‑1 (MQ=60)
ATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGGGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGG < SRR4302535.648776/94‑1 (MQ=60)
ATGAGCCAGATTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGG < SRR4302535.190218/94‑1 (MQ=60)
TGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGT < SRR4302535.1651182/94‑1 (MQ=60)
TGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGT < SRR4302535.2983170/94‑1 (MQ=60)
GATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTA > SRR4302535.1510694/1‑94 (MQ=60)
TCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACT > SRR4302535.566768/1‑94 (MQ=60)
CCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTC > SRR4302535.1944118/1‑94 (MQ=60)
CAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCA < SRR4302535.1021083/94‑1 (MQ=60)
AGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAG > SRR4302535.713947/1‑94 (MQ=60)
GTTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAA > SRR4302535.4267516/1‑94 (MQ=60)
TTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAA < SRR4302535.4416138/94‑1 (MQ=60)
TTATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAA < SRR4302535.3237839/94‑1 (MQ=60)
TATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCTACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAAC < SRR4302535.4087862/94‑1 (MQ=60)
ATCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACATGCTGGTACTCAGTAAACC > SRR4302535.905447/1‑94 (MQ=60)
TCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCG < SRR4302535.3281779/94‑1 (MQ=60)
TCGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCG < SRR4302535.4224755/94‑1 (MQ=60)
CGACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGG < SRR4302535.3426765/94‑1 (MQ=60)
ACTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAA > SRR4302535.1052445/1‑94 (MQ=60)
CTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAG > SRR4302535.3922842/1‑94 (MQ=60)
CTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAG < SRR4302535.2958520/94‑1 (MQ=60)
CTGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAG > SRR4302535.2710500/1‑94 (MQ=60)
TGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGT < SRR4302535.3539252/94‑1 (MQ=60)
TGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGT < SRR4302535.2276344/94‑1 (MQ=60)
TGAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGT < SRR4302535.2367353/94‑1 (MQ=60)
GAACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTG > SRR4302535.2225897/1‑94 (MQ=60)
AACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGA < SRR4302535.3494017/94‑1 (MQ=60)
ACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAT < SRR4302535.4286873/94‑1 (MQ=60)
ACGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAAAAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAG > SRR4302535.598123/1‑94 (MQ=60)
CGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATC < SRR4302535.4211800/94‑1 (MQ=60)
CGAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATC < SRR4302535.3517966/94‑1 (MQ=60)
GAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAACGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCG < SRR4302535.2524289/94‑1 (MQ=60)
GAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCG > SRR4302535.2105333/1‑94 (MQ=60)
GAAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCG > SRR4302535.1528106/1‑94 (MQ=60)
AAGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGC < SRR4302535.3681669/94‑1 (MQ=60)
AGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCC > SRR4302535.2804886/1‑94 (MQ=60)
AGCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCC > SRR4302535.2136132/1‑94 (MQ=60)
GCCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCG < SRR4302535.3205770/94‑1 (MQ=60)
CCGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGC > SRR4302535.4363013/1‑94 (MQ=60)
CGATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCT > SRR4302535.621792/1‑94 (MQ=60)
GATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTA > SRR4302535.3455638/1‑94 (MQ=60)
ATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT > SRR4302535.2990348/1‑94 (MQ=60)
ATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT < SRR4302535.3829156/94‑1 (MQ=60)
ATTTTCGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAC > SRR4302535.1014926/1‑94 (MQ=60)
CGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACA > SRR4302535.2636695/1‑94 (MQ=60)
CGTGGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACA < SRR4302535.3316048/94‑1 (MQ=60)
GTGGTGAGCGCTTTGCCGACTGGCCATGCCACCTCAAAGGCAACAACGACCTGCTGGTCCTCAGTAACCCGGAAGTGATCGCCGCTATCCACAA < SRR4302535.1284571/94‑1 (MQ=60)
TGGTGGGCGCTTTCCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAAC < SRR4302535.435484/94‑1 (MQ=60)
CGGTGAGCGCTTTGCAGCCTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAACCCGGAAGTGATCGCCGCTATCCACAAC < SRR4302535.1384312/94‑1 (MQ=60)
GGTGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACG < SRR4302535.724977/94‑1 (MQ=60)
TGAGCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCC < SRR4302535.4091897/94‑1 (MQ=60)
GCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCCTAC < SRR4302535.1566491/94‑1 (MQ=60)
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TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCCTAC > NC_000913/4221433‑4221619
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
