Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,225,139 |
T→C |
intergenic (+49/‑171) |
metH → / → yjbB |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase/putative alpha helix protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,225,139 | 0 | T | C | 100.0%
| 350.4
/ NA
| 114 | intergenic (+49/‑171) | metH/yjbB | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase/putative alpha helix protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (56/58); total (56/58) |
Only 100 of 147 total aligned reads displayed.
GCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAG > NC_000913/4225051‑4225226
|
gcgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGccc < 1:257898/93‑1 (MQ=255)
gcgcTGGCTGGCACCGAATCGGGGGTATGACGCGGACTGATTCACAAATCTGTCATTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGccc < 2:501722/93‑1 (MQ=255)
cgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCCCTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCt < 2:4509422/93‑1 (MQ=255)
tggctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGtc < 1:2236429/93‑1 (MQ=255)
tggctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGtc < 1:4561444/93‑1 (MQ=255)
ctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCCCAATGAGCGCCCTGTctct < 2:4578607/93‑1 (MQ=255)
tggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCtt > 2:3781631/1‑93 (MQ=255)
ggcACGGAATCTGGGGTATGACGCGGACTGATCCACAAATCTGTTATTTTTCCTA‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCttt < 1:1104435/93‑1 (MQ=255)
gccgccGAATCGGGGTTATGCCGCGGACTGATTCACAAATCTGTCACTTTCCCTA‑ACAACAAA‑CAGGGCGCTTAATGAGCGCCCTGTCTCttt < 2:4311963/89‑1 (MQ=255)
cACCGAATGTGGGGTATGACGCGGACTGATTCACAAATCTGTCATTTTTCCTT‑ACAACAAA‑CAGGGCGCTAAATGAGCGCCCTGTCTCTttat < 1:1050529/93‑1 (MQ=255)
gAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGAGCGCTCAATGAGCGCCCTTTCTCTTTATTAat > 2:4126306/1‑93 (MQ=255)
attCTGGGTTATGACGCGGACTAATTCACAATTCTGTCACTTTTCATA‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAata < 2:2084794/91‑1 (MQ=255)
atgtGGGGAATGCCGCGGATTAATTCAAAATTCTTTTTCTTTCCCTA‑AAAACAAC‑CGGGGCGTTAAAGGACCCCCCTGTCTCTTTATTAatat < 2:3282509/90‑1 (MQ=255)
tCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATg > 1:3634977/1‑93 (MQ=255)
cTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGa < 2:1446516/93‑1 (MQ=255)
ggggTATGCCGCGGACTATTTAACAATTTTGTC‑TTTTTCCTTAACAAAAAA‑CGGGGCCCTCAATGAGCCCCCTGTCTCTTTATTAATATGaaa < 2:122863/93‑1 (MQ=255)
ggggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGaaa > 1:3101449/1‑93 (MQ=255)
ggggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAACGCCCTGTCTCTTTATTAATATGaaa > 2:3491946/1‑93 (MQ=255)
gggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAac < 1:4535136/93‑1 (MQ=255)
ggTATGACGCGGACTGATTCACAATTCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGGGCGCCCTGTCTCTTTATTAATATGAAaca < 2:1426410/93‑1 (MQ=255)
ggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAaca > 2:1479946/1‑93 (MQ=255)
gTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAacac < 1:716032/93‑1 (MQ=255)
gTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAacac < 1:1311201/93‑1 (MQ=255)
gTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTAAATGGGCCCCCTGTCTCTTTATTAATATGAAacac < 1:1391324/93‑1 (MQ=255)
tATGCCGGGAACTTATTCAAAATTCTGTCATTTTTCCTA‑AAAACAAA‑CGGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACt < 2:2544560/93‑1 (MQ=255)
tATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACt > 2:3695053/1‑93 (MQ=255)
tATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑AAGGGGGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACt > 1:2608682/1‑93 (MQ=255)
aTGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACtt > 2:2906634/1‑93 (MQ=255)
tgccgcgGACTGATTCACAAATCTTTCACTTTTCCTT‑ACAACAAG‑CGGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTta < 1:2015448/90‑1 (MQ=255)
tGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTta < 1:1428806/93‑1 (MQ=255)
tGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTta < 1:2162159/93‑1 (MQ=255)
gACGCGTACTAATTCACAAATCTGTCATTTTTCCTT‑ACAACAAC‑CAGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTtat < 2:2754163/93‑1 (MQ=255)
cgcgGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATAc < 2:4529066/93‑1 (MQ=255)
cgcgGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATAc > 2:739355/1‑93 (MQ=255)
gcgGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACt > 1:1515067/1‑93 (MQ=255)
cgGACTTATCCACAAATCTGTCTTTTTTCTTT‑ACAACAAA‑CAGGGCGCGAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTg < 1:419720/93‑1 (MQ=255)
cgGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CGGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTg < 2:2789490/93‑1 (MQ=255)
gACTGATTCACAAATCTGTCCCTTTTCCTT‑ACAAAAAA‑CGGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGa < 1:3466601/93‑1 (MQ=255)
gACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTTATATGAAACACTTATACTTGa > 2:322931/1‑93 (MQ=255)
gACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGa > 2:2294864/1‑93 (MQ=255)
cTGATCCACAAATCTGTCATTTTCCCTT‑ACAACAAG‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGaaa < 2:4462897/93‑1 (MQ=255)
atGATTCACAAATCTGTCACTTTCCCTT‑ACAACAAG‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGaaa < 1:3405068/92‑1 (MQ=255)
taTTCACAAGTCGTTCATTTTCCTTT‑ACAAAAAA‑CAGGCCGCTGAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa < 1:2840827/92‑1 (MQ=255)
gATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa > 1:4448749/1‑93 (MQ=255)
gATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTACACTGGAAACa > 1:1863535/1‑93 (MQ=255)
aaTTCACAAATCTGTCTCTTTTCCTT‑ACAACAAA‑CGGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa < 2:3463681/92‑1 (MQ=255)
aTTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAg < 2:3787309/93‑1 (MQ=255)
ttCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAgg > 1:2912904/1‑93 (MQ=255)
ttCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCCGTCTCTTCTTTAATATGAAAAACATATAATTGAAACaag > 1:1648429/1‑91 (MQ=255)
tCACAAATTTGACACTTTTGCAT‑GCATCAAA‑CGGGGCCCGCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGc < 1:541848/93‑1 (MQ=255)
tCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGGTCCATGAGCGCCCTGTCTCTTTATTTATATGAAACACTTATACTTGAAACAggg > 2:2696683/1‑92 (MQ=255)
tCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGAGCTCAATGAGCGCCCTGTCTCTTTATTAATATTAAACACTTATTATTGAAACAggg > 1:3564047/1‑92 (MQ=255)
cacaAATCTGTCTTTTTTCCTT‑ACAACAAA‑CAGGGCGCTAAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCt < 2:321518/93‑1 (MQ=255)
cacaAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCt < 1:2201062/93‑1 (MQ=255)
cacaAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCt > 2:4646877/1‑93 (MQ=255)
caAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTgg > 1:328498/1‑93 (MQ=255)
aaaTCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGa > 1:2837501/1‑93 (MQ=255)
tCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaata > 1:4522990/1‑93 (MQ=255)
tGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaataat > 2:1976313/1‑93 (MQ=255)
tGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCCGTCTCTTTTTTAATATTTAAAACTTATACTTGAAAAAAGCTGGgataat > 2:4009818/1‑93 (MQ=255)
gTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGgataatt > 2:2089079/1‑92 (MQ=255)
gTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGagtaaat > 1:353640/1‑91 (MQ=255)
tCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATTAGCGCCCCGTCTCTTTTTTTATATTAAACACTTATACTCGAAACAAGCTGGAACAATCt > 2:2637818/1‑93 (MQ=255)
tCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCt < 1:1462417/93‑1 (MQ=255)
cACTTTTCCTA‑ACAACAAA‑CGGGGCGCACAATGCCCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCtt < 1:1641258/93‑1 (MQ=255)
cattttCCTT‑ACAAAAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTa < 1:714097/91‑1 (MQ=255)
aCTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTa < 2:768079/93‑1 (MQ=255)
cTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg < 1:2355863/93‑1 (MQ=255)
cTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg < 1:1466787/93‑1 (MQ=255)
cTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg > 1:3890942/1‑93 (MQ=255)
cTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg < 1:405426/93‑1 (MQ=255)
ttttTCTT‑AAAAAAAACCGGGGCTCTAAATGCGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg < 2:1642272/93‑1 (MQ=255)
ttttCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGCAACAGGCTGGAATAATCTTAGc > 2:2983110/1‑93 (MQ=255)
ttttCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGGATAATCTTatc > 1:320961/1‑91 (MQ=255)
ttttCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGc < 1:3778988/93‑1 (MQ=255)
tttcCCTA‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGc < 1:1735376/93‑1 (MQ=255)
ttCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCg > 1:293779/1‑93 (MQ=255)
ttCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCg < 2:3034301/93‑1 (MQ=255)
cat‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAATCCTTATACTGGAAACAGGCTGGAAATATCTTAGGCggga > 2:4618455/3‑91 (MQ=255)
tt‑ACAACAAG‑CAGGGCGCTCAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGaaa < 1:4247472/93‑1 (MQ=255)
t‑ACAACAAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTTGAAACAGGCTGGAATAATCTTAGCCGGaaaa > 2:3377284/1‑93 (MQ=255)
acaacaAA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGaaaaa > 2:1376949/1‑93 (MQ=255)
aaaacaaa‑caGGGCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGaaaaa < 1:1043247/91‑1 (MQ=255)
caacaaA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAc > 1:1359430/1‑93 (MQ=255)
caacaaA‑CAGGGCGCTCAATGAGCGCCCTGTCTCTTTAATAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAc < 1:3085563/93‑1 (MQ=255)
aaacaaa‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAc < 1:3761349/92‑1 (MQ=255)
aacaaa‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAca > 1:1486118/1‑92 (MQ=255)
aaa‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAAt > 1:547784/1‑93 (MQ=255)
aa‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATg < 2:2317191/93‑1 (MQ=255)
aa‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATg < 1:1793582/93‑1 (MQ=255)
a‑caGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGt > 1:126767/1‑93 (MQ=255)
cggggCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTc < 2:427238/91‑1 (MQ=255)
ggCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGCAATAATCTTAGCCGGAAAAACGAATGTCaaa < 2:640595/93‑1 (MQ=255)
gcTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGGAAAAAGAATGTCaaaaag > 2:2623390/1‑91 (MQ=255)
cTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAgga > 1:1295502/1‑92 (MQ=255)
tCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGca > 2:3698082/1‑93 (MQ=255)
aaTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGcaca > 2:1839568/1‑93 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGATAAACGAATGTCAAAAGGCACAg > 1:605100/1‑93 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAg < 1:178115/93‑1 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAg < 2:3753253/93‑1 (MQ=255)
|
GCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAA‑CAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAG > NC_000913/4225051‑4225226
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAA > NC_000913/4225046‑4225230
|
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC < SRR4302535.1115671/94‑1 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGC > SRR4302535.3014238/1‑94 (MQ=60)
GCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCT < SRR4302535.259677/94‑1 (MQ=60)
TGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCT < SRR4302535.2252339/94‑1 (MQ=60)
TGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCT < SRR4302535.4592574/94‑1 (MQ=60)
GCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCCCAATGAAAGCCCTCTCTCT > SRR4302535.1707147/1‑94 (MQ=60)
TGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTT > SRR4302535.1835677/1‑94 (MQ=60)
GGCACGGAATCTGGGGTATGACGCGGACTGATCCACAAATCTGTTATTTTTCCTAACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTA < SRR4302535.1112325/94‑1 (MQ=60)
GCACCGAATGTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTAAAACAACCGGGGCGCTCAATGAGCGCCCTGTCTCTTTAT < SRR4302535.175676/94‑1 (MQ=60)
GCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTAT > SRR4302535.286168/1‑94 (MQ=60)
CACCGAATGTGGGGTATGACGCGGACTGATTCACAAATCTGTCATTTTTCCTTACAACAAACAGGGCGCTAAATGAGCGCCCTGTCTCTTTATT < SRR4302535.1058000/94‑1 (MQ=60)
CACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATT > SRR4302535.145545/1‑94 (MQ=60)
ccctatTCTGGGTTATGACGCGGACTGATTCACAAATCTGTCATTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTA < SRR4302535.1863666/88‑1 (MQ=60)
CCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAA > SRR4302535.4444648/1‑94 (MQ=60)
CCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAA < SRR4302535.276651/94‑1 (MQ=60)
CGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAAT < SRR4302535.3721841/94‑1 (MQ=60)
GAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATA < SRR4302535.2249372/94‑1 (MQ=60)
aatctggagtattcggagaaagtttacaaAAATCTGTCACTTTTCCTTACAACAACCAGGGCGCTCAAGGAGCGCCCTGTCTCTTTATTAATAT < SRR4302535.1776787/65‑1 (MQ=60)
ATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATG > SRR4302535.3660166/1‑94 (MQ=60)
TGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAA > SRR4302535.3123038/1‑94 (MQ=60)
GGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACA < SRR4302535.4566167/94‑1 (MQ=60)
GTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACT < SRR4302535.721063/94‑1 (MQ=60)
GTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACT < SRR4302535.1320572/94‑1 (MQ=60)
GTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTAAATGGGCCCCCTGTCTCTTTATTAATATGAAACACT < SRR4302535.1401255/94‑1 (MQ=60)
GTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAAAAGGGGGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACT > SRR4302535.2627403/1‑94 (MQ=60)
ATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTA < SRR4302535.1627691/94‑1 (MQ=60)
TGCCGCGGACTGATTCACAAATCTTTCACTTTTCCTTACAACAAGCGGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTAT < SRR4302535.2029970/94‑1 (MQ=60)
TGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTAT < SRR4302535.2177676/94‑1 (MQ=60)
TGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTAT < SRR4302535.1438999/94‑1 (MQ=60)
CGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACT < SRR4302535.2098777/94‑1 (MQ=60)
CGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACT > SRR4302535.1525982/1‑94 (MQ=60)
CGGACTTATCCACAAATCTGTCTTTTTTCTTTACAACAAACAGGGCGCGAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGG < SRR4302535.422654/94‑1 (MQ=60)
GGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGA > SRR4302535.708632/1‑94 (MQ=60)
GACTGATTCACAAATCTGTCCCTTTTCCTTACAAAAAACGGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAA < SRR4302535.3490690/94‑1 (MQ=60)
CTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAAC > SRR4302535.3580771/1‑94 (MQ=60)
ATGATTCACAAATCTGTCACTTTCCCTTACAACAAGCAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAAC < SRR4302535.3428763/94‑1 (MQ=60)
TGATTCACAATTCTGTCTTTTTTCCTTACAACAACCAGGCCGCTAAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACA < SRR4302535.139054/94‑1 (MQ=60)
TGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACA > SRR4302535.4479266/1‑94 (MQ=60)
TGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTACACTGGAAACA > SRR4302535.1876971/1‑94 (MQ=60)
tattcacaagtcgttcattttcctTTACAAAAAACAGGCCGCTGAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAG < SRR4302535.2860978/70‑1 (MQ=58)
aacaCACAAAGCTGTCACTTTTCCTAACAAAAAACGGCGCACTCAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAG < SRR4302535.1307306/90‑1 (MQ=57)
ATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGG > SRR4302535.2933483/1‑94 (MQ=60)
ATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCCGTCTCTTCTTTAATATGAAAaacatataattgaaacaag > SRR4302535.1660350/1‑75 (MQ=60)
TTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGAGCTCAATGAGCGCCCTGTCTCTTTATTAATATTAAACACTTATtattgaaacaggg > SRR4302535.3588759/1‑81 (MQ=60)
tcacaaatttgacacttttgcatgcatcaaacggggcccgCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCT < SRR4302535.545633/54‑1 (MQ=60)
CACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTG < SRR4302535.2216751/94‑1 (MQ=60)
ACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGG > SRR4302535.330777/1‑94 (MQ=60)
CAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGA > SRR4302535.2857636/1‑94 (MQ=60)
AAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAA > SRR4302535.541588/1‑94 (MQ=60)
ATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACATGCTGGTATA > SRR4302535.4553981/1‑94 (MQ=60)
ATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATA > SRR4302535.4553980/1‑94 (MQ=60)
ttttcttTTTTCTTTACAACAAACGGGGCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAAT < SRR4302535.1825130/87‑1 (MQ=60)
TGTCACTTTTCCTTACAACAAACAGGGCGCTCAATTAGCGCCCCGTCTCTTTTTTTATATGAAAAACTTATACTGGAAACAGGCTGGGATAATT > SRR4302535.893569/1‑94 (MQ=60)
TGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAgtaaat > SRR4302535.356082/1‑88 (MQ=60)
TCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTT < SRR4302535.1472894/94‑1 (MQ=60)
CACTTTTCCTAACAACAAACGGGGCGCACAATGCCCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTA < SRR4302535.1653120/94‑1 (MQ=60)
caTTTTCCTTACAAAAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAG < SRR4302535.719113/92‑1 (MQ=60)
ACTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAG > SRR4302535.3917622/1‑94 (MQ=60)
CTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGGATAATCTTATC > SRR4302535.323184/1‑94 (MQ=60)
CTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGC < SRR4302535.2372755/94‑1 (MQ=60)
CTTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGC < SRR4302535.1477295/94‑1 (MQ=60)
CTTTTCCTTACAACAAACAGGGCGCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGC < SRR4302535.408266/94‑1 (MQ=60)
TTTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCC < SRR4302535.3805068/94‑1 (MQ=60)
TTTCCCTAACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCC < SRR4302535.1747921/94‑1 (MQ=60)
TTTCCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCG > SRR4302535.295832/1‑94 (MQ=60)
CCTTACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTTTTAATATTAAAAACTTATACTtggaaaagggtgggaaaatctttggcggga > SRR4302535.929671/1‑64 (MQ=60)
TTACAACAAGCAGGGCGCTCAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAA < SRR4302535.4276563/94‑1 (MQ=60)
TACAACAAACAGGCCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAA < SRR4302535.1120708/94‑1 (MQ=60)
ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAC > SRR4302535.1369148/1‑94 (MQ=60)
AAAACAAACAGGGCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAC < SRR4302535.1050642/94‑1 (MQ=60)
CAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACA > SRR4302535.1496753/1‑94 (MQ=60)
CAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTAATAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACG < SRR4302535.3107056/94‑1 (MQ=60)
AAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACG < SRR4302535.3787342/94‑1 (MQ=60)
ACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAA < SRR4302535.3862148/94‑1 (MQ=60)
CAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAAT > SRR4302535.551611/1‑94 (MQ=60)
AAACGGGCCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATG < SRR4302535.3445243/94‑1 (MQ=60)
AACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGT < SRR4302535.3143765/94‑1 (MQ=60)
AACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGT > SRR4302535.127660/1‑94 (MQ=60)
AACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGT < SRR4302535.1806549/94‑1 (MQ=60)
ACAGGGCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTC < SRR4302535.4217808/94‑1 (MQ=60)
GCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGC < SRR4302535.3005157/94‑1 (MQ=60)
GCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGA > SRR4302535.1304742/1‑94 (MQ=60)
CAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACA > SRR4302535.2506529/1‑94 (MQ=60)
CAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACA > SRR4302535.2719732/1‑94 (MQ=60)
AATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGATAAACGAATGTCAAAAGGCACAG > SRR4302535.609332/1‑94 (MQ=60)
AATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAG > SRR4302535.1494918/1‑94 (MQ=60)
ATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGT < SRR4302535.179353/94‑1 (MQ=60)
AGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAA < SRR4302535.4403741/94‑1 (MQ=60)
|
GTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTTACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAA > NC_000913/4225046‑4225230
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
