Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,227,795 A→G intergenic (‑74/‑138) pepE ← / → yjbC peptidase E/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,227,7950AG100.0% 1139.2 / NA 363intergenic (‑74/‑138)pepE/yjbCpeptidase E/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (171/192);  total (171/192)

Only 100 of 397 total aligned reads displayed.

TCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227703‑4227884
                                                                                            |                                                                                         
tCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCa                                                                                           >  1:4018598/1‑93 (MQ=255)
  aaTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTcgcg                                                                                         >  2:7435937/1‑93 (MQ=255)
    tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       >  1:1332737/1‑93 (MQ=255)
    tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       >  2:3384205/1‑93 (MQ=255)
    tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       <  1:5091821/93‑1 (MQ=255)
      aaaaCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  2:6484873/93‑1 (MQ=255)
      aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  1:1055413/93‑1 (MQ=255)
      aaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  1:3209414/93‑1 (MQ=255)
        aGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCg                                                                                   >  2:3201743/1‑93 (MQ=255)
         gCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGc                                                                                  >  2:2850822/1‑93 (MQ=255)
          cAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCTATGTCGca                                                                                 >  2:7690976/1‑93 (MQ=255)
           aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcgc                                                                                >  2:5427880/1‑91 (MQ=255)
           aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcac                                                                                >  2:6663246/1‑93 (MQ=255)
            gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcaca                                                                               >  1:6778632/1‑93 (MQ=255)
             ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                              <  1:5763503/93‑1 (MQ=255)
               ccATTACTTCTCCGGTTAGTAAGAAATCACGGTAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTg                                                                            >  1:7823583/1‑93 (MQ=255)
                cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                           >  2:5687341/1‑93 (MQ=255)
                cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                           >  1:1744943/1‑93 (MQ=255)
                cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                           >  2:4244532/1‑93 (MQ=255)
                 aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCt                                                                          >  2:4001676/1‑93 (MQ=255)
                   tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        <  2:1628517/93‑1 (MQ=255)
                   tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        <  1:1967621/93‑1 (MQ=255)
                   tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        <  2:4659459/93‑1 (MQ=255)
                     cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  1:2587651/1‑93 (MQ=255)
                     cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  1:3399868/1‑93 (MQ=255)
                     cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      >  1:4528130/1‑93 (MQ=255)
                       tctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGa                                                                    >  2:2066340/1‑93 (MQ=255)
                        ctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaa                                                                   >  1:7744429/1‑93 (MQ=255)
                        ctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaa                                                                   >  1:7672303/1‑93 (MQ=255)
                        ctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTCGaa                                                                   >  2:406685/1‑93 (MQ=255)
                         tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATTGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                  <  1:6016969/93‑1 (MQ=255)
                            ggTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTg                                                               >  1:7597767/1‑93 (MQ=255)
                            ggTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTg                                                               >  1:4340160/1‑93 (MQ=255)
                             gTTAGTAAGACATCGCGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              <  2:1770681/93‑1 (MQ=255)
                             gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTTGAAAGTGa                                                              >  2:3611206/1‑93 (MQ=255)
                              ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                             <  2:443216/93‑1 (MQ=255)
                              ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                             <  1:5585053/93‑1 (MQ=255)
                               tAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAtt                                                            <  2:367138/93‑1 (MQ=255)
                                aGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           >  1:3110884/1‑93 (MQ=255)
                                  tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                         <  1:3822245/93‑1 (MQ=255)
                                  tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                         <  1:3512870/93‑1 (MQ=255)
                                  tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                         >  2:4861159/1‑93 (MQ=255)
                                  gaaGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                         <  1:1695800/92‑1 (MQ=255)
                                    aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                       <  1:2935110/93‑1 (MQ=255)
                                     aaaaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCa                                                      <  2:2505237/92‑1 (MQ=255)
                                      aaaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAg                                                     <  1:6219823/93‑1 (MQ=255)
                                       aaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAgg                                                    <  2:7512732/93‑1 (MQ=255)
                                        aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                   <  2:3165495/93‑1 (MQ=255)
                                        aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                   <  1:5362996/93‑1 (MQ=255)
                                        aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                   <  2:1492896/93‑1 (MQ=255)
                                          cACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTaa                                                 <  2:6571125/93‑1 (MQ=255)
                                          cACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTaa                                                 <  2:6070552/93‑1 (MQ=255)
                                          cACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTaa                                                 <  2:7836321/93‑1 (MQ=255)
                                           aCGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAc                                                <  2:4501976/93‑1 (MQ=255)
                                           aCGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAc                                                <  1:2819359/93‑1 (MQ=255)
                                            cGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACg                                               <  1:6382221/93‑1 (MQ=255)
                                            cGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACg                                               <  2:707855/93‑1 (MQ=255)
                                               gAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAt                                            >  2:797313/1‑93 (MQ=255)
                                                acgCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAtt                                           <  2:1948037/91‑1 (MQ=255)
                                                 ggCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTc                                          >  1:6433563/1‑93 (MQ=255)
                                                   cATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                        <  2:5238016/93‑1 (MQ=255)
                                                   cATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCaa                                        <  2:5915505/93‑1 (MQ=255)
                                                     tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                      >  1:868488/1‑93 (MQ=255)
                                                     tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                      >  1:4920332/1‑93 (MQ=255)
                                                         aCCACTGCGAATTTAACCACTTAGTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  2:4351952/93‑1 (MQ=255)
                                                         aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  2:1170304/93‑1 (MQ=255)
                                                         aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAt                                  <  2:680076/93‑1 (MQ=255)
                                                          ccACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATg                                 <  1:6065347/93‑1 (MQ=255)
                                                           cACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAtag                                >  2:3418296/1‑91 (MQ=255)
                                                            aCTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGa                               <  1:4403054/93‑1 (MQ=255)
                                                            aCTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGa                               <  2:2925149/93‑1 (MQ=255)
                                                              tGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaaa                             <  1:3679869/93‑1 (MQ=255)
                                                              tGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGTGCAGGTAACCAATTCAAGCCAATGGaaa                             >  1:973605/1‑93 (MQ=255)
                                                                 gAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATaa                          <  2:2300519/93‑1 (MQ=255)
                                                                  aaTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAc                         >  2:3505812/1‑93 (MQ=255)
                                                                  aaTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAc                         >  1:2471410/1‑93 (MQ=255)
                                                                  aaTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAAc                         >  1:1529013/1‑93 (MQ=255)
                                                                   aTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTTCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACa                        <  2:5529913/93‑1 (MQ=255)
                                                                    tttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaa                       <  1:5190149/93‑1 (MQ=255)
                                                                     ttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaaa                      <  1:1581967/93‑1 (MQ=255)
                                                                       aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    >  2:915913/1‑93 (MQ=255)
                                                                       aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  1:1767643/93‑1 (MQ=255)
                                                                       aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  1:5872323/93‑1 (MQ=255)
                                                                         ccACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGt                  >  1:733277/1‑93 (MQ=255)
                                                                         ccACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGt                  <  1:2055941/93‑1 (MQ=255)
                                                                          cACTTACTGACATGGCTCGCGATGTCTCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGtt                 <  1:1906711/93‑1 (MQ=255)
                                                                          cACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGtt                 >  1:6470638/1‑93 (MQ=255)
                                                                              tACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCt             >  1:2707277/1‑93 (MQ=255)
                                                                                cagACATCGCTCGCGATGCCCCACATTGCTTCTGGAAAGTGATTGGAGCAGGTAACGACTTCAAGCCAATGGAAATAACAAATAGTTCGCTCa           <  1:417085/91‑1 (MQ=255)
                                                                                cTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCa           >  2:2191502/1‑93 (MQ=255)
                                                                                 tGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAt          <  1:6644612/93‑1 (MQ=255)
                                                                                 tGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAt          >  1:4697084/1‑93 (MQ=255)
                                                                                   aCATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGa        >  1:118709/1‑93 (MQ=255)
                                                                                    cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc       <  2:6209429/93‑1 (MQ=255)
                                                                                    cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc       >  1:7097376/1‑93 (MQ=255)
                                                                                    cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGGTCGCTCATGAc       >  2:5001590/1‑93 (MQ=255)
                                                                                    cATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGCGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc       >  2:1850148/1‑93 (MQ=255)
                                                                                      tGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTa     >  2:3816709/1‑93 (MQ=255)
                                                                                         cTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAttt  <  2:7300141/93‑1 (MQ=255)
                                                                                         cTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAttt  <  1:6889606/93‑1 (MQ=255)
                                                                                            |                                                                                         
TCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227703‑4227884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 212 total aligned reads displayed.
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT  >  NC_000913/4227702‑4227887
                                                                                             |                                                                                            
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                              <  SRR4302543.927634/94‑1 (MQ=60)
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                              <  SRR4302543.7018929/94‑1 (MQ=60)
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                              >  SRR4302543.6193563/1‑94 (MQ=60)
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCG                                                                                              >  SRR4302543.1840798/1‑94 (MQ=60)
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCA                                                                                              >  SRR4302543.4054487/1‑94 (MQ=60)
  CAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCG                                                                                            >  SRR4302543.5508768/1‑94 (MQ=60)
   AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGA                                                                                           >  SRR4302543.5659872/1‑94 (MQ=60)
   AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGA                                                                                           >  SRR4302543.185040/1‑94 (MQ=60)
    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAT                                                                                          <  SRR4302543.6894764/94‑1 (MQ=60)
    ATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAT                                                                                          >  SRR4302543.1344614/1‑94 (MQ=60)
     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                         <  SRR4302543.7250392/94‑1 (MQ=60)
     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                         <  SRR4302543.5137957/94‑1 (MQ=60)
     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                         >  SRR4302543.5305384/1‑94 (MQ=60)
     TAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATG                                                                                         >  SRR4302543.3435396/1‑94 (MQ=60)
      AAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAGTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGT                                                                                        <  SRR4302543.5098066/94‑1 (MQ=60)
      AAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGT                                                                                        >  SRR4302543.3291728/1‑94 (MQ=60)
       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                       <  SRR4302543.3238381/94‑1 (MQ=60)
       AAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTC                                                                                       <  SRR4302543.1064883/94‑1 (MQ=60)
        AAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCG                                                                                      >  SRR4302543.3485640/1‑94 (MQ=60)
         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGC                                                                                     >  SRR4302543.6068253/1‑94 (MQ=60)
         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGC                                                                                     >  SRR4302543.1325433/1‑94 (MQ=60)
         AGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCCCGATGTCGC                                                                                     >  SRR4302543.7895514/1‑94 (MQ=60)
          GCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCA                                                                                    <  SRR4302543.7731678/94‑1 (MQ=60)
           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGTCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                   <  SRR4302543.6908964/94‑1 (MQ=60)
           CAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAC                                                                                   >  SRR4302543.256740/1‑94 (MQ=60)
            AGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACA                                                                                  >  SRR4302543.6842652/1‑94 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 <  SRR4302543.7055944/94‑1 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 <  SRR4302543.5402875/94‑1 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 >  SRR4302543.3323060/1‑94 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 <  SRR4302543.1740117/94‑1 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 >  SRR4302543.3613319/1‑94 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 >  SRR4302543.4873173/1‑94 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 >  SRR4302543.3980534/1‑94 (MQ=60)
             GTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACAACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 <  SRR4302543.4104569/94‑1 (MQ=60)
             GTTCCATTACTGCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAT                                                                                 <  SRR4302543.6836234/94‑1 (MQ=60)
              TTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATT                                                                                <  SRR4302543.5816001/94‑1 (MQ=60)
               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGTAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                               >  SRR4302543.7897279/1‑94 (MQ=60)
               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                               >  SRR4302543.971004/1‑94 (MQ=60)
               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                               <  SRR4302543.162360/94‑1 (MQ=60)
               TCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTG                                                                               >  SRR4302543.1770552/1‑94 (MQ=60)
                CCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGC                                                                              >  SRR4302543.1760527/1‑94 (MQ=60)
                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                             <  SRR4302543.3720323/94‑1 (MQ=60)
                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                             >  SRR4302543.1745958/1‑94 (MQ=60)
                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                             <  SRR4302543.6220310/94‑1 (MQ=60)
                 CATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCT                                                                             <  SRR4302543.4382588/94‑1 (MQ=60)
                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                            >  SRR4302543.2379829/1‑94 (MQ=60)
                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                            >  SRR4302543.2941793/1‑94 (MQ=60)
                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTT                                                                            >  SRR4302543.273529/1‑94 (MQ=60)
                  ATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCAAATTGCTT                                                                            >  SRR4302543.5588003/1‑94 (MQ=60)
                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCT                                                                          <  SRR4302543.1985258/94‑1 (MQ=60)
                    TACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCT                                                                          >  SRR4302543.7975753/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.1979134/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.3430327/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.3168106/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.418168/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.2611182/1‑94 (MQ=60)
                     ACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         >  SRR4302543.4569342/1‑94 (MQ=60)
                     ACGTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTG                                                                         <  SRR4302543.2631249/94‑1 (MQ=60)
                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCGCACTGCTTCTTG                                                                        >  SRR4302543.4757910/1‑94 (MQ=60)
                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGG                                                                        >  SRR4302543.4757669/1‑94 (MQ=60)
                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGG                                                                        <  SRR4302543.3915128/94‑1 (MQ=60)
                      CTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGG                                                                        >  SRR4302543.4673419/1‑94 (MQ=60)
                        TCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAA                                                                      >  SRR4302543.7817580/1‑94 (MQ=60)
                         CTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAA                                                                     >  SRR4302543.3563240/1‑94 (MQ=60)
                          TCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATTGCTCGCGATGTCGCACATTGCTTCTGGAAAG                                                                    <  SRR4302543.6072642/94‑1 (MQ=60)
                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTG                                                                  >  SRR4302543.4379529/1‑94 (MQ=60)
                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTG                                                                  >  SRR4302543.7669930/1‑94 (MQ=60)
                            CGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTG                                                                  >  SRR4302543.1588277/1‑94 (MQ=60)
                            CGGTAAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTG                                                                  <  SRR4302543.3211120/94‑1 (MQ=60)
                             GGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGA                                                                 <  SRR4302543.6102064/94‑1 (MQ=60)
                              GTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAT                                                                <  SRR4302543.136025/94‑1 (MQ=60)
                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATT                                                               <  SRR4302543.4488328/94‑1 (MQ=60)
                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATT                                                               <  SRR4302543.6824501/94‑1 (MQ=60)
                               TTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATT                                                               <  SRR4302543.5635924/94‑1 (MQ=60)
                               GTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATT                                                               <  SRR4302543.4539279/94‑1 (MQ=60)
                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                              >  SRR4302543.3138866/1‑94 (MQ=60)
                                TAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTT                                                              <  SRR4302543.5144178/94‑1 (MQ=60)
                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGA                                                            <  SRR4302543.683732/94‑1 (MQ=60)
                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGA                                                            <  SRR4302543.7750764/94‑1 (MQ=60)
                                  GTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGA                                                            <  SRR4302543.2364774/94‑1 (MQ=60)
                                   TAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAG                                                           <  SRR4302543.3544251/94‑1 (MQ=60)
                                   TAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAG                                                           <  SRR4302543.3855956/94‑1 (MQ=60)
                                   TAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAG                                                           >  SRR4302543.3045497/1‑94 (MQ=60)
                                   GAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAG                                                           <  SRR4302543.1711009/94‑1 (MQ=60)
                                    AAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGC                                                          <  SRR4302543.3437393/94‑1 (MQ=60)
                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCA                                                         <  SRR4302543.5891658/94‑1 (MQ=60)
                                     AGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCA                                                         <  SRR4302543.2961757/94‑1 (MQ=60)
                                      GAAATCACGGGAGGCATGCTACCACTGCGAATTGAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAG                                                        <  SRR4302543.7684431/94‑1 (MQ=60)
                                       AAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGG                                                       <  SRR4302543.6278539/94‑1 (MQ=60)
                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                     <  SRR4302543.5411535/94‑1 (MQ=60)
                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                     >  SRR4302543.557891/1‑94 (MQ=60)
                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTA                                                     >  SRR4302543.119394/1‑94 (MQ=60)
                                         ATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGTA                                                     >  SRR4302543.2279563/1‑94 (MQ=60)
                                          TCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAA                                                    <  SRR4302543.7624021/94‑1 (MQ=60)
                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACCTTGCTTCTGGAAAGTGATTTGAGCAGGTAAA                                                   >  SRR4302543.2766809/1‑94 (MQ=60)
                                           CACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAA                                                   >  SRR4302543.2766810/1‑94 (MQ=60)
                                            ACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                  <  SRR4302543.2032580/94‑1 (MQ=60)
                                            ACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                  <  SRR4302543.2845163/94‑1 (MQ=60)
                                            ACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACG                                                  <  SRR4302543.2014662/94‑1 (MQ=60)
                                             CGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGA                                                 <  SRR4302543.6442283/94‑1 (MQ=60)
                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                <  SRR4302543.7032647/94‑1 (MQ=60)
                                              GGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAA                                                >  SRR4302543.2521843/1‑94 (MQ=60)
                                               GGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAT                                               >  SRR4302543.7860237/1‑94 (MQ=60)
                                               GGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAT                                               >  SRR4302543.2867181/1‑94 (MQ=60)
                                               GGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAAT                                               <  SRR4302543.2934570/94‑1 (MQ=60)
                                                GAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATT                                              <  SRR4302543.6419980/94‑1 (MQ=60)
                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                             <  SRR4302543.1374730/94‑1 (MQ=60)
                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                             >  SRR4302543.4670769/1‑94 (MQ=60)
                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                             >  SRR4302543.1779/1‑94 (MQ=60)
                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                             >  SRR4302543.6494179/1‑94 (MQ=60)
                                                 AGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTC                                             >  SRR4302543.6494178/1‑94 (MQ=60)
                                                   GCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAA                                           <  SRR4302543.5019323/94‑1 (MQ=60)
                                                    CATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAG                                          <  SRR4302543.7763497/94‑1 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACCTTTCTTCTGGAAAGGGATTTGAGAAGGTAACGAATTCAAGC                                         >  SRR4302543.7662721/1‑94 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                         >  SRR4302543.4965160/1‑94 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                         >  SRR4302543.661174/1‑94 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                         >  SRR4302543.1976285/1‑94 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                         <  SRR4302543.1525371/94‑1 (MQ=60)
                                                     ATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGC                                         >  SRR4302543.876242/1‑94 (MQ=60)
                                                      TGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCC                                        >  SRR4302543.4597904/1‑94 (MQ=60)
                                                       GCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCA                                       <  SRR4302543.7927080/94‑1 (MQ=60)
                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAA                                      >  SRR4302543.2021418/1‑94 (MQ=60)
                                                        CTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGTAACGAATTCAAGCCAA                                      >  SRR4302543.2723876/1‑94 (MQ=60)
                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAT                                     <  SRR4302543.7805319/94‑1 (MQ=60)
                                                         TACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAAT                                     <  SRR4302543.170171/94‑1 (MQ=60)
                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGGTGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATG                                    >  SRR4302543.1170345/1‑94 (MQ=60)
                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATG                                    >  SRR4302543.5728519/1‑94 (MQ=60)
                                                          ACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATG                                    <  SRR4302543.7818032/94‑1 (MQ=60)
                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                   <  SRR4302543.6122823/94‑1 (MQ=60)
                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                   <  SRR4302543.5314530/94‑1 (MQ=60)
                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                   >  SRR4302543.7701202/1‑94 (MQ=60)
                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                   >  SRR4302543.4258428/1‑94 (MQ=60)
                                                           CCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAGTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGG                                   <  SRR4302543.5019214/94‑1 (MQ=60)
                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGA                                  <  SRR4302543.7274215/94‑1 (MQ=60)
                                                            CACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGA                                  <  SRR4302543.876422/94‑1 (MQ=60)
                                                             ACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAA                                 <  SRR4302543.4442967/94‑1 (MQ=60)
                                                              CTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAA                                >  SRR4302543.1837037/1‑94 (MQ=60)
                                                               TGCTAATCTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAAT                               <  SRR4302543.3712199/94‑1 (MQ=60)
                                                               TGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAAT                               <  SRR4302543.3712200/94‑1 (MQ=60)
                                                               TGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAAT                               <  SRR4302543.7961398/94‑1 (MQ=60)
                                                                 CGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAA                             >  SRR4302543.5814507/1‑94 (MQ=60)
                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGGAAGTGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAAC                            >  SRR4302543.3114476/1‑94 (MQ=60)
                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAC                            <  SRR4302543.2587002/94‑1 (MQ=60)
                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAC                            <  SRR4302543.6279645/94‑1 (MQ=60)
                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAAC                            >  SRR4302543.2493720/1‑94 (MQ=60)
                                                                  GAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGGGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAAC                            >  SRR4302543.1542728/1‑94 (MQ=60)
                                                                    ATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAA                          >  SRR4302543.174290/1‑94 (MQ=60)
                                                                    ATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAA                          >  SRR4302543.3730103/1‑94 (MQ=60)
                                                                     TTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCCGGTAACGAATTCAAGCCAATGGAAATAACAAA                         >  SRR4302543.7117858/1‑94 (MQ=60)
                                                                     TTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAA                         <  SRR4302543.5236956/94‑1 (MQ=60)
                                                                     TTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTGCTGAAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAA                         <  SRR4302543.1548876/94‑1 (MQ=60)
                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                        <  SRR4302543.1596082/94‑1 (MQ=60)
                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                        >  SRR4302543.6039128/1‑94 (MQ=60)
                                                                      TTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAT                        >  SRR4302543.40188/1‑94 (MQ=60)
                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      <  SRR4302543.5925802/94‑1 (MQ=60)
                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      <  SRR4302543.1783454/94‑1 (MQ=60)
                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      >  SRR4302543.6089777/1‑94 (MQ=60)
                                                                        AACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      <  SRR4302543.6532848/94‑1 (MQ=60)
                                                                        AACCACTTACTGACATGGCTCGCGATGTCGAACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      <  SRR4302543.1783455/94‑1 (MQ=60)
                                                                        AACCACTTACTGACAGGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAG                      <  SRR4302543.6453112/94‑1 (MQ=60)
                                                                         ACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGT                     >  SRR4302543.739847/1‑94 (MQ=60)
                                                                          CCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTT                    >  SRR4302543.6531596/1‑94 (MQ=60)
                                                                          CCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTT                    >  SRR4302543.6531595/1‑94 (MQ=60)
                                                                          CCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTT                    <  SRR4302543.2074344/94‑1 (MQ=60)
                                                                           CACTTACTGACATGGCTCGCGATGTCTCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTC                   <  SRR4302543.1923881/94‑1 (MQ=60)
                                                                           CACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTC                   >  SRR4302543.4136878/1‑94 (MQ=60)
                                                                            CCTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCG                  <  SRR4302543.6357564/94‑1 (MQ=60)
                                                                            ACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCG                  >  SRR4302543.930479/1‑94 (MQ=60)
                                                                             CTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGC                 >  SRR4302543.3002989/1‑94 (MQ=60)
                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCT                >  SRR4302543.2731851/1‑94 (MQ=60)
                                                                              TTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCT                >  SRR4302543.5157475/1‑94 (MQ=60)
                                                                               TACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTC               >  SRR4302543.6515480/1‑94 (MQ=60)
                                                                               TACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGAGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTC               >  SRR4302543.6515479/1‑94 (MQ=60)
                                                                               TACTGACATGGCTCGCGATGTCCCACATGGCTTCTGGAAATTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTC               <  SRR4302543.1234457/94‑1 (MQ=60)
                                                                               TACTGACATGCCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTC               <  SRR4302543.1234458/94‑1 (MQ=60)
                                                                                 CTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT             >  SRR4302543.4739981/1‑94 (MQ=60)
                                                                                 CAGACATCGCTCGCGATGCCCCACATTGCTTCTGGAAAGTGATTGGAGCAGGTAACGACTTCAAGCCAATGGAAATAACAAATAGTTCGCTCAT             <  SRR4302543.420980/94‑1 (MQ=60)
                                                                                  TGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATG            <  SRR4302543.765670/94‑1 (MQ=60)
                                                                                  TGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATG            <  SRR4302543.6707326/94‑1 (MQ=60)
                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA           <  SRR4302543.4383147/94‑1 (MQ=60)
                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA           >  SRR4302543.119779/1‑94 (MQ=60)
                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA           >  SRR4302543.4246030/1‑94 (MQ=60)
                                                                                   GACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGA           <  SRR4302543.1552462/94‑1 (MQ=60)
                                                                                    ACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAC          >  SRR4302543.4217777/1‑94 (MQ=60)
                                                                                    ACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAC          <  SRR4302543.1775596/94‑1 (MQ=60)
                                                                                    ACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAC          >  SRR4302543.7166292/1‑94 (MQ=60)
                                                                                     CATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACT         >  SRR4302543.6074449/1‑94 (MQ=60)
                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTA        >  SRR4302543.4387412/1‑94 (MQ=60)
                                                                                      ATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAACCAATAGTTCGCTCATGACTA        >  SRR4302543.6204531/1‑94 (MQ=60)
                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT     <  SRR4302543.6665104/94‑1 (MQ=60)
                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT     <  SRR4302543.5834993/94‑1 (MQ=60)
                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT     <  SRR4302543.3796322/94‑1 (MQ=60)
                                                                                         GCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT     >  SRR4302543.7200082/1‑94 (MQ=60)
                                                                                          CTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT    <  SRR4302543.3351486/94‑1 (MQ=60)
                                                                                          CTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT    >  SRR4302543.2716666/1‑94 (MQ=60)
                                                                                          CTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT    >  SRR4302543.5654508/1‑94 (MQ=60)
                                                                                          CTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT    <  SRR4302543.6954396/94‑1 (MQ=60)
                                                                                          CTCGCGATGACGCACATTGCTTCTGGAAAGTGAGTGGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTT    <  SRR4302543.6147906/94‑1 (MQ=60)
                                                                                           TCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTT   >  SRR4302543.25592/1‑94 (MQ=60)
                                                                                            CGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT  >  SRR4302543.243020/1‑94 (MQ=60)
                                                                                             |                                                                                            
CTCAATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTTTTT  >  NC_000913/4227702‑4227887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑