Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,243,337 |
A→G |
L221P (CTG→CCG) |
malE ← |
periplasmic maltose‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,243,337 | 0 | A | G | 100.0%
| 725.6
/ NA
| 228 | L221P (CTG→CCG) | malE | periplasmic maltose‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (116/112); total (116/112) |
Only 100 of 238 total aligned reads displayed.
TCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCAGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCC > NC_000913/4243248‑4243426
|
tCATCGCTGTTTCGCCTTTTTTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGGTTTTTTTTAATCAGGTCAACCAGGa > 2:2311154/1‑93 (MQ=255)
cATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGaa < 1:4449710/93‑1 (MQ=255)
cATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGaa < 1:4573532/93‑1 (MQ=255)
aaTCGCTGTTTCGCCTTTATTAAATGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAAACGGGaa < 2:1114538/92‑1 (MQ=255)
aTCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAg > 2:3346530/1‑93 (MQ=255)
tCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAgg < 2:529288/93‑1 (MQ=255)
tCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTCTTAATCAGGTCAACCGGGAAgg > 1:3785721/1‑93 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc < 1:1872379/93‑1 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc > 1:2703108/1‑93 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc < 1:2996684/93‑1 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc < 2:2849775/93‑1 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc < 1:3565400/93‑1 (MQ=255)
gCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTc > 2:3988790/1‑93 (MQ=255)
cTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCa < 1:4178908/93‑1 (MQ=255)
tGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAg > 1:1809576/1‑93 (MQ=255)
gTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGa < 1:1592631/93‑1 (MQ=255)
gTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGa < 2:4054433/93‑1 (MQ=255)
cGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCg > 2:864761/1‑93 (MQ=255)
gCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGc > 1:2362014/1‑93 (MQ=255)
tttATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCttt > 1:2561191/1‑93 (MQ=255)
tattaAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTcg < 2:1330858/93‑1 (MQ=255)
attaAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTcgc < 2:2692432/93‑1 (MQ=255)
aaaGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGcc < 1:2987243/93‑1 (MQ=255)
aaaGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGcc > 2:1745340/1‑93 (MQ=255)
aGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACACGCTTTCGCGCCAg > 2:2642436/1‑93 (MQ=255)
ggCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGc > 1:5956/1‑93 (MQ=255)
gCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGttt > 2:3146319/1‑92 (MQ=255)
gCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTa > 1:1031325/1‑93 (MQ=255)
ttCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATc > 1:819776/1‑93 (MQ=255)
cTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCa < 1:1958002/93‑1 (MQ=255)
cTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCa < 1:583058/93‑1 (MQ=255)
tGCTATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAc < 1:2399465/93‑1 (MQ=255)
ctaTGGAATAATCGGTGTCTGCATTCATTGGTTTTTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCTAGCTTTTTCCACGc < 2:4614538/91‑1 (MQ=255)
gATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGcc > 2:1778279/1‑93 (MQ=255)
aTGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGccc > 2:1577142/1‑93 (MQ=255)
aTGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGccc > 1:290693/1‑93 (MQ=255)
aTGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGccc > 1:950775/1‑93 (MQ=255)
aTGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGccc < 1:3094311/93‑1 (MQ=255)
aTGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGccc > 1:2523135/1‑93 (MQ=255)
tGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCa < 2:701796/93‑1 (MQ=255)
ggAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCAc > 1:1240821/1‑93 (MQ=255)
gTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACGCGCTTTCGCTCCAGCGTTATCCTCGCCCActgt > 2:1722925/1‑90 (MQ=255)
gTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTc < 1:1098358/93‑1 (MQ=255)
gTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTc > 1:276792/1‑93 (MQ=255)
tAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCt > 2:3751594/1‑93 (MQ=255)
aTCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCttt > 2:397382/1‑93 (MQ=255)
aTCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCttt < 1:4127893/93‑1 (MQ=255)
cGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCGCACGTCTTTaa < 2:2919575/93‑1 (MQ=255)
cGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTaa < 1:79169/93‑1 (MQ=255)
cGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTaa < 1:1363638/93‑1 (MQ=255)
cGGTGTCGGCATTGATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCACCCCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTaa < 2:2801373/93‑1 (MQ=255)
gtgtCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATg > 2:3378798/1‑93 (MQ=255)
tgtCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGt < 1:1693959/93‑1 (MQ=255)
tgtCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGt > 1:2929664/1‑93 (MQ=255)
gtCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTc > 1:3390810/1‑93 (MQ=255)
gtCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTc > 1:4255775/1‑93 (MQ=255)
tCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCg > 1:4194264/1‑93 (MQ=255)
tCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCg > 1:1283822/1‑93 (MQ=255)
tGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTa < 2:1315000/93‑1 (MQ=255)
tGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTa > 1:1743905/1‑93 (MQ=255)
gCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTAc < 1:42017/93‑1 (MQ=255)
gCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTAc > 1:1457960/1‑93 (MQ=255)
gCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTAc < 2:4249290/93‑1 (MQ=255)
gCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGCTATCCACGCCCACGTCTTTAATGTCGTat > 1:541277/1‑92 (MQ=255)
aTTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACtt > 2:3520695/1‑93 (MQ=255)
aTTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACtt > 2:671285/1‑93 (MQ=255)
ttCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTg > 2:2454130/1‑93 (MQ=255)
cATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGcc > 2:3689146/1‑93 (MQ=255)
aTGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCg > 1:4002159/1‑93 (MQ=255)
aTGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCg > 1:3282519/1‑93 (MQ=255)
tgtgTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGt > 2:2552504/1‑93 (MQ=255)
tgtgTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGt > 1:2662132/1‑93 (MQ=255)
tgtgTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACCTGCCGt > 2:2997418/1‑93 (MQ=255)
gtgtTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGtt > 2:2481280/1‑93 (MQ=255)
gtgtTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGtt < 2:1994729/93‑1 (MQ=255)
gtgtTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGtt < 2:4167599/93‑1 (MQ=255)
tgtttgttTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGttt < 1:2565477/93‑1 (MQ=255)
tgtttgttTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGttt > 2:3829675/1‑93 (MQ=255)
tgtttgttTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGttt > 2:742908/1‑93 (MQ=255)
gtttgtttTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGtttt < 1:3723619/93‑1 (MQ=255)
gtttgtttTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGtttt > 1:3593005/1‑93 (MQ=255)
tttgtttTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTc > 1:1144219/1‑93 (MQ=255)
gtttTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATa < 2:1037331/93‑1 (MQ=255)
tttttAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATAc < 2:896903/93‑1 (MQ=255)
tttAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACtt > 2:3458577/1‑93 (MQ=255)
tAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGa < 2:561384/93‑1 (MQ=255)
tAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGa < 2:2159283/93‑1 (MQ=255)
aaTCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCATCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGaa < 1:1535710/93‑1 (MQ=255)
aaTCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGaa < 2:439111/93‑1 (MQ=255)
aaTCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGaa > 2:4682745/1‑93 (MQ=255)
aaTCAGGGCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGaa > 2:4479152/1‑93 (MQ=255)
aTCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAAc < 1:2081468/93‑1 (MQ=255)
aTCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAAc > 2:2737856/1‑93 (MQ=255)
cAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGc < 1:2888559/93‑1 (MQ=255)
aGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCa < 1:2180003/93‑1 (MQ=255)
gTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATa > 2:4316147/1‑93 (MQ=255)
gTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATa < 2:1299269/93‑1 (MQ=255)
tCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATaa < 2:4272581/93‑1 (MQ=255)
tCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATaa < 2:1678909/93‑1 (MQ=255)
aCCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAAccc < 1:3482583/93‑1 (MQ=255)
|
TCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCAGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCC > NC_000913/4243248‑4243426
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGGTCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCAGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCCCG > NC_000913/4243244‑4243429
|
ATGGTCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCG > SRR4302535.2928578/1‑94 (MQ=60)
GTCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGA > SRR4302535.887996/1‑94 (MQ=60)
GTCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGA > SRR4302535.3565842/1‑94 (MQ=60)
TCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAA > SRR4302535.1718786/1‑94 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG < SRR4302535.4604707/94‑1 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG < SRR4302535.4480230/94‑1 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG < SRR4302535.1355902/94‑1 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG < SRR4302535.2654545/94‑1 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG > SRR4302535.2550488/1‑94 (MQ=60)
CATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGCAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAG > SRR4302535.2537176/1‑94 (MQ=60)
ATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTCTTAATCAGGTCAACCGGGAAGG > SRR4302535.3811834/1‑94 (MQ=60)
CGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTC < SRR4302535.2106824/94‑1 (MQ=60)
CGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTC > SRR4302535.1761846/1‑94 (MQ=60)
CGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTC > SRR4302535.2722420/1‑94 (MQ=60)
CGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGATTTTAATCAGGTCAACCGGGAAGGTC > SRR4302535.4529788/1‑94 (MQ=60)
GCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCA < SRR4302535.1885869/94‑1 (MQ=60)
GCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCA < SRR4302535.3590123/94‑1 (MQ=60)
GCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCA > SRR4302535.436143/1‑94 (MQ=60)
GCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCA < SRR4302535.1599046/94‑1 (MQ=60)
GCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCA < SRR4302535.3017696/94‑1 (MQ=60)
CTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAG > SRR4302535.2909558/1‑94 (MQ=60)
CTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAG > SRR4302535.1822667/1‑94 (MQ=60)
CTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAG < SRR4302535.4207511/94‑1 (MQ=60)
CTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAG < SRR4302535.2768402/94‑1 (MQ=60)
CTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAG > SRR4302535.1290079/1‑94 (MQ=60)
TGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGA > SRR4302535.2316118/1‑94 (MQ=60)
GTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGAC < SRR4302535.1604125/94‑1 (MQ=60)
GTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGAC > SRR4302535.769870/1‑94 (MQ=60)
CGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGC > SRR4302535.2378977/1‑94 (MQ=60)
GCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCT < SRR4302535.4224163/94‑1 (MQ=60)
CTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTT > SRR4302535.256296/1‑94 (MQ=60)
CTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTT > SRR4302535.2579630/1‑94 (MQ=60)
ATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCG < SRR4302535.1966536/94‑1 (MQ=60)
AAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCA < SRR4302535.3008192/94‑1 (MQ=60)
AAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCA > SRR4302535.3309299/1‑94 (MQ=60)
AAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCA > SRR4302535.1145522/1‑94 (MQ=60)
AAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCA > SRR4302535.4017531/1‑94 (MQ=60)
AAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAG > SRR4302535.3162885/1‑94 (MQ=60)
AGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGC > SRR4302535.6008/1‑94 (MQ=60)
AGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGC > SRR4302535.887021/1‑94 (MQ=60)
AGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGC < SRR4302535.1535128/94‑1 (MQ=60)
GGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCG < SRR4302535.1381216/94‑1 (MQ=60)
AGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTA > SRR4302535.2391007/1‑94 (MQ=60)
AGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTA > SRR4302535.1038649/1‑94 (MQ=60)
AGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTA > SRR4302535.3591516/1‑94 (MQ=60)
GCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTAT < SRR4302535.659355/94‑1 (MQ=60)
CTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATC > SRR4302535.825531/1‑94 (MQ=60)
CTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAC < SRR4302535.4220495/94‑1 (MQ=60)
CTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAC < SRR4302535.2263831/94‑1 (MQ=60)
CTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAC < SRR4302535.587147/94‑1 (MQ=60)
CTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAC < SRR4302535.1972097/94‑1 (MQ=60)
CTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCAC < SRR4302535.1427530/94‑1 (MQ=60)
TGCTATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACG < SRR4302535.2416719/94‑1 (MQ=60)
CGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCC > SRR4302535.2938407/1‑94 (MQ=60)
GATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCC > SRR4302535.306719/1‑94 (MQ=60)
GATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCC > SRR4302535.292728/1‑94 (MQ=60)
GATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCC > SRR4302535.957506/1‑94 (MQ=60)
GATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCC > SRR4302535.2541315/1‑94 (MQ=60)
ATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCA < SRR4302535.3115858/94‑1 (MQ=60)
TGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCAC > SRR4302535.1249681/1‑94 (MQ=60)
GGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACG > SRR4302535.4009947/1‑94 (MQ=60)
AGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTC > SRR4302535.278725/1‑94 (MQ=60)
AGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTC < SRR4302535.4055507/94‑1 (MQ=60)
GTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCT < SRR4302535.1106180/94‑1 (MQ=60)
GTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCT < SRR4302535.1831801/94‑1 (MQ=60)
AATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTT > SRR4302535.1563748/1‑94 (MQ=60)
ATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTA < SRR4302535.4156141/94‑1 (MQ=60)
TCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAA < SRR4302535.2981604/94‑1 (MQ=60)
CGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAAT < SRR4302535.1373389/94‑1 (MQ=60)
CGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAAT < SRR4302535.79735/94‑1 (MQ=60)
GGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATG > SRR4302535.2032821/1‑94 (MQ=60)
GTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGT > SRR4302535.2950303/1‑94 (MQ=60)
TGTCTGCATTCATTTGTTTGTTTTTAATCAGGTCAGCCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTC < SRR4302535.2582707/94‑1 (MQ=60)
TGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTC < SRR4302535.1706209/94‑1 (MQ=60)
TGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTC > SRR4302535.4284931/1‑94 (MQ=60)
TGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTC > SRR4302535.3414399/1‑94 (MQ=60)
GTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCG < SRR4302535.1157845/94‑1 (MQ=60)
GTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCG > SRR4302535.4222965/1‑94 (MQ=60)
GTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCG > SRR4302535.1292973/1‑94 (MQ=60)
TCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGT > SRR4302535.3008258/1‑94 (MQ=60)
TCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGT < SRR4302535.557247/94‑1 (MQ=60)
CTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTA > SRR4302535.1756522/1‑94 (MQ=60)
TGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTAC > SRR4302535.1468393/1‑94 (MQ=60)
TGCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGCTATCCACGCCCACGTCTTTAATGTCGTAT > SRR4302535.545057/1‑94 (MQ=60)
GCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACT < SRR4302535.42338/94‑1 (MQ=60)
GCATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACT < SRR4302535.269019/94‑1 (MQ=60)
ATTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTG > SRR4302535.2696480/1‑94 (MQ=60)
TTCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGC < SRR4302535.4409835/94‑1 (MQ=60)
TCATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCC > SRR4302535.4219401/1‑94 (MQ=60)
CATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCG < SRR4302535.797788/94‑1 (MQ=60)
CATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCG > SRR4302535.4029537/1‑94 (MQ=60)
CATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCG < SRR4302535.1081462/94‑1 (MQ=60)
CATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCG > SRR4302535.3305317/1‑94 (MQ=60)
ATGTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGT > SRR4302535.2681195/1‑94 (MQ=60)
GTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTT < SRR4302535.2829567/94‑1 (MQ=60)
GTGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTT < SRR4302535.4671224/94‑1 (MQ=60)
TGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTT > SRR4302535.2851883/1‑94 (MQ=60)
TGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTT > SRR4302535.3617938/1‑94 (MQ=60)
TGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTT < SRR4302535.2583938/94‑1 (MQ=60)
TGTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTT > SRR4302535.1190024/1‑94 (MQ=60)
GTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTC > SRR4302535.1152379/1‑94 (MQ=60)
GTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTC > SRR4302535.297324/1‑94 (MQ=60)
GTTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTC < SRR4302535.3749414/94‑1 (MQ=60)
TTTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCA > SRR4302535.4196679/1‑94 (MQ=60)
TTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCAT < SRR4302535.308127/94‑1 (MQ=60)
TTGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCAT > SRR4302535.1997712/1‑94 (MQ=60)
TGTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATA > SRR4302535.3483094/1‑94 (MQ=60)
GTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATAC < SRR4302535.4667877/94‑1 (MQ=60)
CTTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCATACTTGCCGTTTTCATAC < SRR4302535.3796762/94‑1 (MQ=60)
TTTTTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACT < SRR4302535.1683758/94‑1 (MQ=60)
TTAATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGA < SRR4302535.3638916/94‑1 (MQ=60)
AATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCATCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAAC < SRR4302535.1546776/94‑1 (MQ=60)
ATCAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACG < SRR4302535.2096463/94‑1 (MQ=60)
CAGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCA < SRR4302535.2908995/94‑1 (MQ=60)
AGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCAT > SRR4302535.180647/1‑94 (MQ=60)
AGGTCAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCAT < SRR4302535.2195563/94‑1 (MQ=60)
GTCAACCGGGAAGGTCAGACACGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAA < SRR4302535.4251761/94‑1 (MQ=60)
CAACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACC > SRR4302535.3655685/1‑94 (MQ=60)
ACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCC < SRR4302535.588532/94‑1 (MQ=60)
ACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCC < SRR4302535.3506767/94‑1 (MQ=60)
ACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCC < SRR4302535.3421527/94‑1 (MQ=60)
ACCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGCCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCC > SRR4302535.4244118/1‑94 (MQ=60)
CCGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCCC > SRR4302535.3018167/1‑94 (MQ=60)
CGGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCCCG > SRR4302535.1338859/1‑94 (MQ=60)
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ATGGTCATCGCTGTTTCGCCTTTATTAAAGGCAGCTTCTGCGATGGAGTAATCGGTGTCTGCATTCATGTGTTTGTTTTTAATCAGGTCAACCAGGAAGGTCAGACCCGCTTTCGCGCCAGCGTTATCCACGCCCACGTCTTTAATGTCGTACTTGCCGTTTTCATACTTGAACGCATAACCCCCG > NC_000913/4243244‑4243429
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
