Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,328,807 |
A→G |
Q243R (CAG→CGG) |
proP → |
proline permease II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,328,807 | 0 | A | G | 100.0%
| 653.5
/ NA
| 208 | Q243R (CAG→CGG) | proP | proline permease II |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/106); total (102/106) |
Only 100 of 215 total aligned reads displayed.
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC > NC_000913/4328717‑4328895
|
cGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGa > 1:3791459/1‑93 (MQ=255)
gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt > 2:3750165/1‑93 (MQ=255)
gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt > 1:2014512/1‑93 (MQ=255)
ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg > 2:708489/1‑93 (MQ=255)
ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg > 1:3386105/1‑93 (MQ=255)
tttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGcc > 2:1496721/1‑93 (MQ=255)
tttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGcc > 1:643732/1‑93 (MQ=255)
tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCg < 2:2013968/93‑1 (MQ=255)
tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGGTTGCGGGGTGGCCCg > 2:41110/1‑93 (MQ=255)
tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGGTTGCGGGATGGCCCg > 2:4621563/1‑93 (MQ=255)
aCCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGa < 2:1847427/93‑1 (MQ=255)
cTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaaa < 2:2660555/93‑1 (MQ=255)
tGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAg < 1:1025445/93‑1 (MQ=255)
cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc < 1:2946524/93‑1 (MQ=255)
cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc < 1:3698774/93‑1 (MQ=255)
cgcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtc < 1:4157165/93‑1 (MQ=255)
gcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct > 2:2822073/1‑93 (MQ=255)
gcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct > 1:1367847/1‑93 (MQ=255)
ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc > 2:1479077/1‑93 (MQ=255)
ccATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtctc > 2:3672043/1‑93 (MQ=255)
cATGCGCTGGAAGAGACTCCGGCGTTGCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCg < 1:2270149/93‑1 (MQ=255)
cATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCg < 2:350443/93‑1 (MQ=255)
aTGCGCTGGAAGAGACTCCGGCGTTGCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGt > 1:1947169/1‑93 (MQ=255)
aTGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGt < 2:1702301/93‑1 (MQ=255)
tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt < 2:1122260/93‑1 (MQ=255)
tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt < 2:569118/93‑1 (MQ=255)
tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt < 2:507938/93‑1 (MQ=255)
cgcTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa < 1:908237/93‑1 (MQ=255)
cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa < 1:2397983/93‑1 (MQ=255)
cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa > 2:3884838/1‑93 (MQ=255)
tGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGCTTGCGGGATGGCCCGAGAGTCTCGTTTAAag > 1:1853955/1‑93 (MQ=255)
tGGAAGAAACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAag > 2:4456985/1‑93 (MQ=255)
ggAAGAGACTCCTGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAaga < 1:773437/93‑1 (MQ=255)
ggAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAaga > 1:1132842/1‑93 (MQ=255)
ggAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAaga > 1:3007065/1‑93 (MQ=255)
agaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAttc > 1:3758504/1‑92 (MQ=255)
aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc < 1:2495477/93‑1 (MQ=255)
ggCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaa > 2:2811081/1‑93 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa > 2:3038150/1‑93 (MQ=255)
gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa > 2:3496907/1‑93 (MQ=255)
cGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAt > 2:4461149/1‑93 (MQ=255)
cGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAt < 2:381138/93‑1 (MQ=255)
cGTTCCAGCAGCATGACGATAAACTGAAGCAGGGCGTCCGTGAATTTTTGCGCGATGCCCCGAAAGCCTCGTTTAAAGAGATTGCCACTAAAt < 2:308065/93‑1 (MQ=255)
gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa > 1:1529935/1‑93 (MQ=255)
gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa > 1:3521990/1‑93 (MQ=255)
gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGGTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa > 2:93044/1‑93 (MQ=255)
ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc > 1:3236208/1‑93 (MQ=255)
tCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt < 2:122549/93‑1 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg < 2:3541758/93‑1 (MQ=255)
ccAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTg < 1:4093251/93‑1 (MQ=255)
cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg < 2:108581/93‑1 (MQ=255)
cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg < 2:831792/93‑1 (MQ=255)
agcagcATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgc > 2:1264955/1‑93 (MQ=255)
gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg > 2:874918/1‑93 (MQ=255)
gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg > 1:4523309/1‑93 (MQ=255)
aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGGTGGCCCGAGAGTCTCGTTTAAAGAGATTGACACTAAATACTGGCGCAGcc > 2:1154114/1‑93 (MQ=255)
aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc < 2:1374765/93‑1 (MQ=255)
aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc < 2:3185560/93‑1 (MQ=255)
tCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGt > 2:3580934/1‑93 (MQ=255)
tCGATAAACTGGAACAGGGCGACCGGGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCATCCTGt < 2:1944184/93‑1 (MQ=255)
cGATAGACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGtt < 2:753444/93‑1 (MQ=255)
cGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGtt < 2:3275237/93‑1 (MQ=255)
tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc > 1:2725936/1‑93 (MQ=255)
aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt < 1:2526406/93‑1 (MQ=255)
aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGGCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt > 1:1650914/1‑93 (MQ=255)
cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt < 1:4661680/93‑1 (MQ=255)
cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt < 1:3311886/93‑1 (MQ=255)
cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt < 1:2605534/93‑1 (MQ=255)
cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt < 2:232981/93‑1 (MQ=255)
tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa > 2:2501627/1‑93 (MQ=255)
tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa < 1:348569/93‑1 (MQ=255)
tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa < 2:4654262/93‑1 (MQ=255)
ggAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt > 2:316485/1‑93 (MQ=255)
ggAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt > 2:2440067/1‑93 (MQ=255)
gAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAtt < 1:4185659/93‑1 (MQ=255)
aaCAGGGCGACCGTGAGGGTTTGCGGGATGACCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTg < 2:2972308/93‑1 (MQ=255)
aCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTgg > 1:3397210/1‑93 (MQ=255)
cAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGt < 1:3996072/93‑1 (MQ=255)
aGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTc > 1:1289637/1‑93 (MQ=255)
gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt > 1:3941227/1‑93 (MQ=255)
gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt > 2:2905891/1‑93 (MQ=255)
gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt < 2:2487629/93‑1 (MQ=255)
gCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTgg < 1:1043740/93‑1 (MQ=255)
gCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTgg < 1:3127876/93‑1 (MQ=255)
gCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTgg < 2:1915569/93‑1 (MQ=255)
cGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGt < 2:3520180/93‑1 (MQ=255)
aCCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTaa < 1:264185/93‑1 (MQ=255)
aCCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTaa > 2:4493332/1‑93 (MQ=255)
aCCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTaa < 1:1927000/93‑1 (MQ=255)
cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt > 2:3834011/1‑93 (MQ=255)
cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt > 1:2225594/1‑93 (MQ=255)
gTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTg > 2:4250565/1‑93 (MQ=255)
tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc > 1:737703/1‑93 (MQ=255)
tGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGc > 1:995192/1‑93 (MQ=255)
gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc > 1:3814231/1‑93 (MQ=255)
aaGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcca < 2:1857566/93‑1 (MQ=255)
ggTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccacc < 1:3170988/93‑1 (MQ=255)
tttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCcaacaa > 2:649152/1‑93 (MQ=255)
tttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCaa < 1:4639363/93‑1 (MQ=255)
ttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAc < 2:3803509/93‑1 (MQ=255)
|
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC > NC_000913/4328717‑4328895
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > NC_000913/4328714‑4328900
|
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG < SRR4302535.2499282/94‑1 (MQ=60)
TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG > SRR4302535.1242325/1‑94 (MQ=60)
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGTGCGACCGTGAAGGTTTGCGGGA < SRR4302535.4680491/94‑1 (MQ=60)
TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGA > SRR4302535.3817600/1‑94 (MQ=60)
CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT > SRR4302535.2029022/1‑94 (MQ=60)
GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG > SRR4302535.3409667/1‑94 (MQ=60)
GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG < SRR4302535.3022819/94‑1 (MQ=60)
GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG < SRR4302535.769573/94‑1 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC > SRR4302535.848884/1‑94 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC > SRR4302535.648226/1‑94 (MQ=60)
CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC > SRR4302535.3964939/1‑94 (MQ=60)
CTTTACCGGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC < SRR4302535.2433746/94‑1 (MQ=60)
TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGGATGTCGATAAACTGGAACAGGGCGACCGTGAAGGGTTGCGGGATGGCCCG > SRR4302535.2531064/1‑94 (MQ=60)
TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG < SRR4302535.3839603/94‑1 (MQ=60)
TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG > SRR4302535.2005963/1‑94 (MQ=60)
TACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGA > SRR4302535.3096726/1‑94 (MQ=60)
CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGATCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA < SRR4302535.1716922/94‑1 (MQ=60)
TGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGT < SRR4302535.1032729/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT < SRR4302535.3724397/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT < SRR4302535.2967230/94‑1 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT > SRR4302535.1377622/1‑94 (MQ=60)
CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT < SRR4302535.4185621/94‑1 (MQ=60)
CATGCGCTGGAAGAGACTCCGGCGTTGCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT > SRR4302535.1961187/1‑94 (MQ=60)
CATGCGCTGGAAGAGACTCCGGCGTTGCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT < SRR4302535.2286337/94‑1 (MQ=60)
CATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT > SRR4302535.2974268/1‑94 (MQ=60)
CATGCGCTGGAAGAGACTCCGGCGTGCGAGAAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT < SRR4302535.693800/94‑1 (MQ=60)
TGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT < SRR4302535.1301832/94‑1 (MQ=60)
GCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTA < SRR4302535.4083143/94‑1 (MQ=60)
CGCTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA < SRR4302535.914684/94‑1 (MQ=60)
CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA < SRR4302535.2415226/94‑1 (MQ=60)
CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA > SRR4302535.3805977/1‑94 (MQ=60)
CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGCTTGCGGGATGGCCCGAGAGTCTCGTTTAAAG > SRR4302535.1867310/1‑94 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA < SRR4302535.1793741/94‑1 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA > SRR4302535.3028130/1‑94 (MQ=60)
TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA > SRR4302535.1140928/1‑94 (MQ=60)
GGAAGAGACTCCTGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG < SRR4302535.778879/94‑1 (MQ=60)
AAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAT < SRR4302535.3995765/94‑1 (MQ=60)
GAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTC > SRR4302535.3784490/1‑94 (MQ=60)
AGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGC > SRR4302535.1946658/1‑94 (MQ=60)
ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCA > SRR4302535.634916/1‑94 (MQ=60)
ACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCA < SRR4302535.2513482/94‑1 (MQ=60)
CCCGGAGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT < SRR4302535.3419301/94‑1 (MQ=60)
CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA < SRR4302535.3532792/94‑1 (MQ=60)
CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA > SRR4302535.1540957/1‑94 (MQ=60)
CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA > SRR4302535.3546452/1‑94 (MQ=60)
GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC > SRR4302535.3258672/1‑94 (MQ=60)
GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC < SRR4302535.1919356/94‑1 (MQ=60)
GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC < SRR4302535.2485578/94‑1 (MQ=60)
GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC < SRR4302535.4179122/94‑1 (MQ=60)
TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG < SRR4302535.3173210/94‑1 (MQ=60)
CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG < SRR4302535.4121261/94‑1 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC > SRR4302535.4007496/1‑94 (MQ=60)
CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC < SRR4302535.3257262/94‑1 (MQ=60)
AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG > SRR4302535.4554300/1‑94 (MQ=60)
GATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGA > SRR4302535.2725859/1‑94 (MQ=60)
ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTCAAGAGATTGCCACTAAATACTGGCACAGCCTGTTGAC > SRR4302535.2597657/1‑94 (MQ=60)
ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC > SRR4302535.2745409/1‑94 (MQ=60)
ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC > SRR4302535.1039037/1‑94 (MQ=60)
AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCGACTAAATACTGGCGCAGCCTATTGACAT > SRR4302535.1164485/1‑94 (MQ=60)
AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGGCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAT > SRR4302535.1662851/1‑94 (MQ=60)
AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG < SRR4302535.1568952/94‑1 (MQ=60)
AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG < SRR4302535.2544606/94‑1 (MQ=60)
CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA < SRR4302535.3334932/94‑1 (MQ=60)
CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA < SRR4302535.4693207/94‑1 (MQ=60)
CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA < SRR4302535.2624234/94‑1 (MQ=60)
TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT < SRR4302535.350969/94‑1 (MQ=60)
TGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT < SRR4302535.2259488/94‑1 (MQ=60)
GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT < SRR4302535.3395500/94‑1 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG < SRR4302535.4214308/94‑1 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTG > SRR4302535.1115892/1‑94 (MQ=60)
GAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAGGTATTG < SRR4302535.4199814/94‑1 (MQ=60)
AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTATAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG > SRR4302535.3426937/1‑94 (MQ=60)
AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG > SRR4302535.3420846/1‑94 (MQ=60)
CAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTC < SRR4302535.4023413/94‑1 (MQ=60)
CAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTC > SRR4302535.1298826/1‑94 (MQ=60)
AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT > SRR4302535.3968131/1‑94 (MQ=60)
GGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGG < SRR4302535.239054/94‑1 (MQ=60)
GGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGG < SRR4302535.2750064/94‑1 (MQ=60)
GCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGT < SRR4302535.1051138/94‑1 (MQ=60)
GCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGT < SRR4302535.3149659/94‑1 (MQ=60)
ACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAT < SRR4302535.266018/94‑1 (MQ=60)
ACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAT < SRR4302535.1940888/94‑1 (MQ=60)
ACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAT > SRR4302535.3448723/1‑94 (MQ=60)
ACCGTGAAGGTGTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAT < SRR4302535.2126037/94‑1 (MQ=60)
CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT > SRR4302535.2241429/1‑94 (MQ=60)
CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT > SRR4302535.467967/1‑94 (MQ=60)
CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG < SRR4302535.3763379/94‑1 (MQ=60)
GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC > SRR4302535.742889/1‑94 (MQ=60)
GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC > SRR4302535.1002259/1‑94 (MQ=60)
TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC > SRR4302535.3840549/1‑94 (MQ=60)
AAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCAC < SRR4302535.3278412/94‑1 (MQ=60)
AGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACC > SRR4302535.2658823/1‑94 (MQ=60)
GGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCA < SRR4302535.3192946/94‑1 (MQ=60)
GTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAA > SRR4302535.4262420/1‑94 (MQ=60)
TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC < SRR4302535.4670823/94‑1 (MQ=60)
TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC < SRR4302535.1511607/94‑1 (MQ=60)
TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC < SRR4302535.3655653/94‑1 (MQ=60)
TTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACG < SRR4302535.4588284/94‑1 (MQ=60)
TGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGTCACCAACGT > SRR4302535.4612131/1‑94 (MQ=60)
CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGA > SRR4302535.2799573/1‑94 (MQ=60)
CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGA > SRR4302535.3798964/1‑94 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > SRR4302535.3067117/1‑94 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC < SRR4302535.328223/94‑1 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > SRR4302535.1787100/1‑94 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC < SRR4302535.1772026/94‑1 (MQ=60)
GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC < SRR4302535.3907272/94‑1 (MQ=60)
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TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC > NC_000913/4328714‑4328900
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
