Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,333,152	A→G	L16P (CTA→CCA)	yjdB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,333,152	0	A	G	99.8%	1263.4 / NA	403	L16P (CTA→CCA)	yjdB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (201/200); total (203/200)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 424 total aligned reads displayed.

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        <  1:633328/93‑1 (MQ=255)

   tGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAgg                                                                                      <  2:6471227/93‑1 (MQ=255)

   tGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAgg                                                                                      >  2:4122093/1‑93 (MQ=255)

    gTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGgc                                                                                     >  1:5330976/1‑93 (MQ=255)

     tttAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGgcg                                                                                    >  2:1697028/1‑93 (MQ=255)

      ttAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGgcgc                                                                                   >  2:6778399/1‑93 (MQ=255)

        aaaaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCtt                                                                                 >  1:5941975/1‑93 (MQ=255)

          aaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCa                                                                               <  1:61646/93‑1 (MQ=255)

          aaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCa                                                                               >  1:7688246/1‑93 (MQ=255)

            aaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAc                                                                             >  2:397965/1‑93 (MQ=255)

            aaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAc                                                                             <  1:2834447/93‑1 (MQ=255)

            aaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGACGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAc                                                                             <  2:3263836/93‑1 (MQ=255)

               gCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATc                                                                          <  2:831762/93‑1 (MQ=255)

                cAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCa                                                                         >  1:2403887/1‑93 (MQ=255)

                cAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCa                                                                         <  1:3547198/93‑1 (MQ=255)

                cAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCa                                                                         <  1:515194/93‑1 (MQ=255)

                 aaTATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAc                                                                        >  2:3537563/1‑93 (MQ=255)

                 aaTATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAc                                                                        >  1:7440564/1‑93 (MQ=255)

                  atatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACg                                                                       >  1:6463045/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      <  2:5054157/93‑1 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      >  1:1287478/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      >  1:5846641/1‑93 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGTCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     <  2:4876046/93‑1 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     <  2:3784857/93‑1 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     >  2:5743072/1‑93 (MQ=255)

                     ttCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtg                                                                    >  2:2680338/1‑93 (MQ=255)

                     ttCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtg                                                                    <  1:1933496/93‑1 (MQ=255)

                     ttCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtg                                                                    >  2:6388262/1‑93 (MQ=255)

                      tCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtgt                                                                   <  2:1115475/93‑1 (MQ=255)

                       cAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGtt                                                                  >  1:5618274/1‑93 (MQ=255)

                         ggCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTc                                                                >  2:1491468/1‑93 (MQ=255)

                         ggCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTc                                                                <  1:6853870/93‑1 (MQ=255)

                          gCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTcc                                                               <  2:5124574/93‑1 (MQ=255)

                          gCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTcc                                                               >  2:1545243/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            <  1:5786816/93‑1 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            >  2:7791050/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            >  1:6527441/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            <  2:2737094/93‑1 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          >  1:1888712/1‑93 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          >  2:2321611/1‑93 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          >  2:5927086/1‑93 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         <  1:4043680/93‑1 (MQ=255)

                                 gagaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAc                                                        >  2:5251963/1‑93 (MQ=255)

                                 gagaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAc                                                        >  2:7534377/1‑93 (MQ=255)

                                 gagaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAc                                                        >  1:3763688/1‑93 (MQ=255)

                                  agaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACa                                                       <  1:6792382/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:7116140/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  2:4377076/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:4342921/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:501342/93‑1 (MQ=255)

                                      ataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGt                                                   >  2:6941140/1‑93 (MQ=255)

                                        aaaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgc                                                 >  2:6192635/1‑93 (MQ=255)

                                         aaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgcg                                                >  2:4279947/1‑93 (MQ=255)

                                          aaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgcgc                                               <  2:4214335/93‑1 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTATGCGCTTCAACATCACGGTGTTTCCATCGATCATAGTGCGCa                                              >  2:7041614/1‑93 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCa                                              >  2:1216049/1‑93 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCa                                              >  2:1764356/1‑93 (MQ=255)

                                            aggagCCAACAATAGCCAGGCGAGGAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCat                                             <  2:5369423/89‑1 (MQ=255)

                                            aGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCat                                             >  1:989313/1‑93 (MQ=255)

                                             gCGGCAAACAATAGCCAGGCGAGTAAATTCAAAGAGGATCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCata                                            <  2:494001/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          >  1:3962485/1‑93 (MQ=255)

                                                 ccAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCt                                        >  2:1947206/1‑93 (MQ=255)

                                                 ccAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCt                                        >  1:3296652/1‑93 (MQ=255)

                                                  caacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTc                                       <  2:6860112/93‑1 (MQ=255)

                                                  caacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTc                                       <  1:6030458/93‑1 (MQ=255)

                                                   aacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCg                                      >  1:5415953/1‑93 (MQ=255)

                                                     caaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgca                                    >  1:5228386/1‑93 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  <  2:6246448/93‑1 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  <  1:6681182/93‑1 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  >  1:2526821/1‑93 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 >  2:4468988/1‑93 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 <  2:5600910/93‑1 (MQ=255)

                                                         aGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagc                                <  2:5848320/93‑1 (MQ=255)

                                                              ggCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAt                           >  1:6970273/1‑93 (MQ=255)

                                                                 gAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCACAGCAAAATTaa                        >  2:1342520/1‑93 (MQ=255)

                                                                  aGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAg                       >  1:3148711/1‑93 (MQ=255)

                                                                   gTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGc                      >  2:4732396/1‑93 (MQ=255)

                                                                   gTAAATTCAAAGAGGGTCTTTGTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGc                      <  1:5479383/93‑1 (MQ=255)

                                                                    tAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGcc                     >  2:3890348/1‑93 (MQ=255)

                                                                    tAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGcc                     <  2:3091164/93‑1 (MQ=255)

                                                                        ttCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAcc                 <  1:3394143/93‑1 (MQ=255)

                                                                         tCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCt                >  1:110144/1‑93 (MQ=255)

                                                                          cAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCtt               <  1:1005342/93‑1 (MQ=255)

                                                                           aaaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTa              >  2:744114/1‑93 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             >  1:4600855/1‑93 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             >  1:1390491/1‑93 (MQ=255)

                                                                             agagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAg            >  2:3177733/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           <  2:6039384/93‑1 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  2:2098895/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  1:2103837/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  1:4445386/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  2:2517297/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  1:1762548/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          <  1:1199739/93‑1 (MQ=255)

                                                                                gggTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTc         <  1:7845872/93‑1 (MQ=255)

                                                                                  gTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCtt       <  2:4568713/93‑1 (MQ=255)

                                                                                    cTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTaa     <  1:2952140/93‑1 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    >  1:725271/1‑93 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    <  1:4771720/93‑1 (MQ=255)

                                                                                       tttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGt  <  1:2564266/93‑1 (MQ=255)

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGGC  >  NC_000913/4333059‑4333245

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               >  SRR4302543.5499526/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               <  SRR4302543.4600292/94‑1 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              >  SRR4302543.1874073/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              >  SRR4302543.5636082/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              <  SRR4302543.269672/94‑1 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              >  SRR4302543.5877628/1‑94 (MQ=60)

  CACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGT                                                                                             >  SRR4302543.7444535/1‑94 (MQ=60)

  CACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGT                                                                                             >  SRR4302543.7125478/1‑94 (MQ=60)

  CACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGT                                                                                             <  SRR4302543.6313365/94‑1 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302543.6779916/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302543.6866362/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302543.6866363/1‑94 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           <  SRR4302543.639116/94‑1 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           <  SRR4302543.6174812/94‑1 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           <  SRR4302543.4226340/94‑1 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           >  SRR4302543.4930471/1‑94 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           >  SRR4302543.4930473/1‑94 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                          <  SRR4302543.2583203/94‑1 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         >  SRR4302543.5379183/1‑94 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         <  SRR4302543.3839358/94‑1 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         <  SRR4302543.5406174/94‑1 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCGGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCG                                                                                        <  SRR4302543.4524644/94‑1 (MQ=60)

         TTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCT                                                                                      <  SRR4302543.5305136/94‑1 (MQ=60)

         TTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCT                                                                                      >  SRR4302543.3721833/1‑94 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTT                                                                                     >  SRR4302543.5996350/1‑94 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTT                                                                                     >  SRR4302543.1841484/1‑94 (MQ=60)

           AAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTC                                                                                    <  SRR4302543.3573460/94‑1 (MQ=60)

            AAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCA                                                                                   >  SRR4302543.4672293/1‑94 (MQ=60)

            AAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCA                                                                                   >  SRR4302543.7761050/1‑94 (MQ=60)

             AAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAA                                                                                  >  SRR4302543.7523163/1‑94 (MQ=60)

             AAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAA                                                                                  <  SRR4302543.4034340/94‑1 (MQ=60)

             AAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAA                                                                                  <  SRR4302543.62188/94‑1 (MQ=60)

              AAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAC                                                                                 >  SRR4302543.202909/1‑94 (MQ=60)

              AAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAC                                                                                 >  SRR4302543.2237263/1‑94 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                                <  SRR4302543.2860370/94‑1 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                                <  SRR4302543.3965436/94‑1 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               <  SRR4302543.6070317/94‑1 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               <  SRR4302543.7944026/94‑1 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               <  SRR4302543.7880407/94‑1 (MQ=60)

                 GGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATC                                                                              <  SRR4302543.4571759/94‑1 (MQ=60)

                 GGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATC                                                                              >  SRR4302543.1774473/1‑94 (MQ=60)

                  GCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCA                                                                             >  SRR4302543.7518985/1‑94 (MQ=60)

                  GCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCA                                                                             >  SRR4302543.2425631/1‑94 (MQ=60)

                  GCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCA                                                                             <  SRR4302543.6670733/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            <  SRR4302543.594662/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            >  SRR4302543.7511877/1‑94 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            <  SRR4302543.3578685/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            <  SRR4302543.519983/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            <  SRR4302543.7931091/94‑1 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302543.6162374/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302543.6523942/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302543.1122999/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGACAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302543.7786621/1‑94 (MQ=60)

                     ctccactctCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          <  SRR4302543.390057/85‑1 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          >  SRR4302543.5674573/1‑94 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          <  SRR4302543.1934820/94‑1 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          >  SRR4302543.1298952/1‑94 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          >  SRR4302543.5899835/1‑94 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          >  SRR4302543.5899836/1‑94 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                         >  SRR4302543.5649747/1‑94 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAGAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                        >  SRR4302543.5224373/1‑94 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                        <  SRR4302543.3346752/94‑1 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                        >  SRR4302543.6317970/1‑94 (MQ=60)

                        TTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGT                                                                       <  SRR4302543.1950883/94‑1 (MQ=60)

                        TTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGT                                                                       <  SRR4302543.7160130/94‑1 (MQ=60)

                         TCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTT                                                                      >  SRR4302543.5669473/1‑94 (MQ=60)

                           AGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTC                                                                    >  SRR4302543.4988575/1‑94 (MQ=60)

                            GGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCC                                                                   <  SRR4302543.6918507/94‑1 (MQ=60)

                            GGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAAGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCC                                                                   >  SRR4302543.7244122/1‑94 (MQ=60)

                             GCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCA                                                                  <  SRR4302543.5219235/94‑1 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                 <  SRR4302543.1054878/94‑1 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                                >  SRR4302543.6588908/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                                >  SRR4302543.2934599/1‑94 (MQ=60)

                                GATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCG                                                               >  SRR4302543.6526353/1‑94 (MQ=60)

                                GATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCG                                                               <  SRR4302543.5839470/94‑1 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                              >  SRR4302543.1032526/1‑94 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                              >  SRR4302543.1905682/1‑94 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAA                                                             <  SRR4302543.1177859/94‑1 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGAGAGAAAATTCAAAGAGGGTCTTCTTAGTAGGCGCTTCAACATaaacgtgtttccatccac                                                             >  SRR4302543.7650271/1‑76 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                            >  SRR4302543.3796815/1‑94 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                            <  SRR4302543.4079871/94‑1 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                            <  SRR4302543.2570082/94‑1 (MQ=60)

                                    GAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACA                                                           <  SRR4302543.1060548/94‑1 (MQ=60)

                                    GAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACA                                                           >  SRR4302543.3619053/1‑94 (MQ=60)

                                     AGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAA                                                          <  SRR4302543.2098780/94‑1 (MQ=60)

                                     AGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAA                                                          >  SRR4302543.2620931/1‑94 (MQ=60)

                                     AGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAA                                                          <  SRR4302543.6856522/94‑1 (MQ=60)

                                     AGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAA                                                          <  SRR4302543.1570227/94‑1 (MQ=60)

                                      GATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAA                                                         >  SRR4302543.1946386/1‑94 (MQ=60)

                                      GATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAA                                                         >  SRR4302543.2947242/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        >  SRR4302543.7114668/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        >  SRR4302543.7411160/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        >  SRR4302543.5972411/1‑94 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGTCGCTTCACCATCACGGTGTTTCCATCGAACAAAGT                                                       <  SRR4302543.3470765/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                       <  SRR4302543.7002780/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                       <  SRR4302543.7185267/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                       <  SRR4302543.505986/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                       <  SRR4302543.4382309/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTCCCATCGAACAAAGT                                                       <  SRR4302543.5274624/94‑1 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                      <  SRR4302543.5469224/94‑1 (MQ=60)

                                          TAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGC                                                     <  SRR4302543.3116950/94‑1 (MQ=60)

                                           aaacatcgcCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTGTTTGCCAGGCGCTGCACCATCACGGTGTTTCCATCGAACAAAGTGCG                                                    <  SRR4302543.4335573/85‑1 (MQ=60)

                                           AAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCG                                                    <  SRR4302543.4335574/94‑1 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                   >  SRR4302543.513180/1‑94 (MQ=60)

                                             AAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCA                                                  >  SRR4302543.4061545/1‑94 (MQ=60)

                                              AAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                 <  SRR4302543.1844957/94‑1 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                                >  SRR4302543.2953843/1‑94 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                                >  SRR4302543.1930551/1‑94 (MQ=60)

                                                aagtCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTGTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302543.6543053/90‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302543.5942386/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302543.6261328/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302543.2520756/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302543.573657/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              <  SRR4302543.6439296/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              >  SRR4302543.3997584/1‑94 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              >  SRR4302543.5067513/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                             >  SRR4302543.6868075/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                             >  SRR4302543.5525852/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                             >  SRR4302543.297433/1‑94 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                            <  SRR4302543.1506078/94‑1 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                            <  SRR4302543.2786819/94‑1 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                            >  SRR4302543.3326396/1‑94 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                            >  SRR4302543.3326394/1‑94 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           >  SRR4302543.6124875/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          >  SRR4302543.5465224/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          <  SRR4302543.6086876/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          >  SRR4302543.2261156/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGGGCGCATATGCTCG                                          >  SRR4302543.5465223/1‑94 (MQ=60)

                                                       ACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCA                                        >  SRR4302543.1283795/1‑94 (MQ=60)

                                                       ACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCA                                        >  SRR4302543.5275469/1‑94 (MQ=60)

                                                        CAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAA                                       >  SRR4302543.5560565/1‑94 (MQ=60)

                                                        CAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAA                                       >  SRR4302543.3236149/1‑94 (MQ=60)

                                                        CAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAA                                       >  SRR4302543.7359530/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                      >  SRR4302543.2549806/1‑94 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                     <  SRR4302543.6744256/94‑1 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                     <  SRR4302543.3528294/94‑1 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                <  SRR4302543.6937079/94‑1 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302543.5317804/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                <  SRR4302543.1312979/94‑1 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                <  SRR4302543.1312980/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               >  SRR4302543.7035865/1‑94 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               <  SRR4302543.4456885/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               <  SRR4302543.6223833/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               >  SRR4302543.668522/1‑94 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAACCAAAAT                               <  SRR4302543.4946262/94‑1 (MQ=60)

                                                                 GGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATT                              >  SRR4302543.4510521/1‑94 (MQ=60)

                                                                  GCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTA                             <  SRR4302543.6842663/94‑1 (MQ=60)

                                                                   CGAGTAAATTTAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                            >  SRR4302543.3417502/1‑94 (MQ=60)

                                                                   CGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                            <  SRR4302543.648844/94‑1 (MQ=60)

                                                                   CGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                            <  SRR4302543.188681/94‑1 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           <  SRR4302543.655175/94‑1 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           <  SRR4302543.846062/94‑1 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           <  SRR4302543.2071279/94‑1 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           >  SRR4302543.5180566/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           >  SRR4302543.3177035/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           <  SRR4302543.5840782/94‑1 (MQ=60)

                                                                    GAGTAAAGTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCCTATGCTCGCAAAGCAAAATTAAG                           <  SRR4302543.1351866/94‑1 (MQ=60)

                                                                     AGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGC                          >  SRR4302543.2467383/1‑94 (MQ=60)

                                                                     AGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGC                          >  SRR4302543.5728842/1‑94 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302543.119216/94‑1 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTGTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302543.5529045/94‑1 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       >  SRR4302543.256501/1‑94 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       <  SRR4302543.6049615/94‑1 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       >  SRR4302543.6812011/1‑94 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       <  SRR4302543.240073/94‑1 (MQ=60)

                                                                         AATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAC                      <  SRR4302543.4275994/94‑1 (MQ=60)

                                                                         AATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAC                      <  SRR4302543.4203107/94‑1 (MQ=60)

                                                                         AATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAC                      >  SRR4302543.7478028/1‑94 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCACCATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                     <  SRR4302543.7843535/94‑1 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                     <  SRR4302543.3061930/94‑1 (MQ=60)

                                                                           TTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCT                    <  SRR4302543.3424574/94‑1 (MQ=60)

                                                                           TTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCT                    >  SRR4302543.111148/1‑94 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  <  SRR4302543.1014233/94‑1 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                 <  SRR4302543.4446955/94‑1 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                 >  SRR4302543.1403008/1‑94 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                 >  SRR4302543.4642648/1‑94 (MQ=60)

                                                                               AAGAGGGTGTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG                <  SRR4302543.5494292/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG                <  SRR4302543.3010430/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG                <  SRR4302543.1679299/94‑1 (MQ=60)

                                                                                AGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT               >  SRR4302543.1214951/1‑94 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              >  SRR4302543.4485643/1‑94 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              <  SRR4302543.6426335/94‑1 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              >  SRR4302543.2122660/1‑94 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              <  SRR4302543.5955182/94‑1 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              <  SRR4302543.6987671/94‑1 (MQ=60)

                                                                                  AGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTC             <  SRR4302543.1210541/94‑1 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT            <  SRR4302543.7919819/94‑1 (MQ=60)

                                                                                    GGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTT           >  SRR4302543.4700037/1‑94 (MQ=60)

                                                                                     GTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTA          <  SRR4302543.5369479/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        <  SRR4302543.5472308/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        <  SRR4302543.2978947/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        >  SRR4302543.7293047/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        <  SRR4302543.3235493/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        >  SRR4302543.731796/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGATCTTAAG        >  SRR4302543.3624120/1‑94 (MQ=60)

                                                                                        TTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGG       <  SRR4302543.4815328/94‑1 (MQ=60)

                                                                                        TTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGG       <  SRR4302543.2328782/94‑1 (MQ=60)

                                                                                          TTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTT     <  SRR4302543.2587693/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG    <  SRR4302543.5081741/94‑1 (MQ=60)

                                                                                             GGTAGGCGCTTCAACATCACGGTGCTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGACAACCTTAAGTTCTTAAGGTTGGC  >  SRR4302543.6527667/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGGC  >  NC_000913/4333059‑4333245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`