Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,328,807	A→G	Q243R (CAG→CGG)	proP →	proline permease II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,328,807	0	A	G	99.7%	1016.9 / ‑5.3	324	Q243R (CAG→CGG)	proP	proline permease II
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (158/165); total (158/166)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.42e-01

Only 100 of 336 total aligned reads displayed.

TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACG  >  NC_000913/4328717‑4328896

  gggCTTTACCTGCGCCATGCGCTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt                                                                                       <  2:3267152/93‑1 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGag                                                                                       >  1:1024554/1‑92 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGag                                                                                       >  1:6786539/1‑92 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt                                                                                       >  1:7863355/1‑93 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt                                                                                       <  2:4628319/93‑1 (MQ=255)

  gggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAt                                                                                       <  2:1956574/93‑1 (MQ=255)

   ggCTTTCCCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      <  2:72397/93‑1 (MQ=255)

   ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      >  2:1585459/1‑93 (MQ=255)

   ggCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATg                                                                                      >  1:1858794/1‑93 (MQ=255)

    gCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATgg                                                                                     <  2:1799488/93‑1 (MQ=255)

       ttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGccc                                                                                  >  2:4375045/1‑93 (MQ=255)

       ttACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGccc                                                                                  >  2:3417912/1‑93 (MQ=255)

        tACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCg                                                                                 >  1:2863566/1‑93 (MQ=255)

          ccTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaa                                                                               >  2:4303011/1‑93 (MQ=255)

          ccTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaa                                                                               <  2:5296902/93‑1 (MQ=255)

          ccTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaa                                                                               >  1:1361568/1‑93 (MQ=255)

           cTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaaa                                                                              <  2:4901476/93‑1 (MQ=255)

           cTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaaa                                                                              <  2:5840735/93‑1 (MQ=255)

           cTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGaaa                                                                              >  1:5738019/1‑93 (MQ=255)

            tGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAg                                                                             <  2:2389859/93‑1 (MQ=255)

               gcCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGtct                                                                          >  2:114731/1‑93 (MQ=255)

                   tGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGtt                                                                      >  1:2850405/1‑93 (MQ=255)

                     cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa                                                                    <  1:4356487/93‑1 (MQ=255)

                     cgcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTa                                                                    >  2:3773501/1‑93 (MQ=255)

                      gcTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGTGATGGCCCGAAAGTCTCGTTTaa                                                                   >  2:5652887/1‑93 (MQ=255)

                       cTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTaaa                                                                  <  1:1977130/93‑1 (MQ=255)

                          gAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAagag                                                               >  2:903434/1‑93 (MQ=255)

                           aaGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAgaga                                                              <  2:7078227/93‑1 (MQ=255)

                            agagACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAt                                                             <  1:2679686/93‑1 (MQ=255)

                            agagACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAt                                                             <  2:2825929/93‑1 (MQ=255)

                             gagaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAtt                                                            <  2:3181133/93‑1 (MQ=255)

                             gagaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAtt                                                            >  2:3672600/1‑93 (MQ=255)

                              agaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTg                                                           <  1:2290649/93‑1 (MQ=255)

                               gaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGc                                                          >  2:1982030/1‑93 (MQ=255)

                               gaCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGc                                                          >  1:6275584/1‑93 (MQ=255)

                                aCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGcc                                                         >  1:6457430/1‑93 (MQ=255)

                                  tCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAc                                                       <  1:3449654/93‑1 (MQ=255)

                                     ggCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaa                                                    >  1:2157436/1‑93 (MQ=255)

                                     ggCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaa                                                    >  1:370104/1‑93 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGGGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   <  1:1625405/93‑1 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   <  2:4079329/93‑1 (MQ=255)

                                      gCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTaaa                                                   <  2:6298597/93‑1 (MQ=255)

                                       cGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAt                                                  <  1:3244367/93‑1 (MQ=255)

                                        gTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATa                                                 <  2:3974217/93‑1 (MQ=255)

                                         ttCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAc                                                >  2:1787538/1‑93 (MQ=255)

                                          tCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt                                               <  2:6900175/93‑1 (MQ=255)

                                          tCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt                                               >  1:6937030/1‑93 (MQ=255)

                                          tCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt                                               <  1:978936/93‑1 (MQ=255)

                                            cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg                                             >  1:5173616/1‑93 (MQ=255)

                                            cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg                                             >  1:4697214/1‑93 (MQ=255)

                                            cagcagCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTgg                                             <  1:3137072/93‑1 (MQ=255)

                                             agcagcATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgc                                            >  1:5521742/1‑93 (MQ=255)

                                             agaagcaTGTCGATAATCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCGGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgc                                            <  2:613419/90‑1 (MQ=255)

                                              gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg                                           >  1:5318988/1‑93 (MQ=255)

                                              gcagcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGgcg                                           >  2:2002497/1‑93 (MQ=255)

                                                agcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCa                                         <  1:5001917/93‑1 (MQ=255)

                                                agcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCa                                         <  2:7167995/93‑1 (MQ=255)

                                                 gcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAg                                        >  2:255732/1‑93 (MQ=255)

                                                 gcaTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAg                                        >  1:1422763/1‑93 (MQ=255)

                                                   aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc                                      <  2:2654580/93‑1 (MQ=255)

                                                   aTGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGcc                                      <  2:502596/93‑1 (MQ=255)

                                                      tCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGt                                   >  2:4851439/1‑93 (MQ=255)

                                                      tCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGt                                   >  1:7675869/1‑93 (MQ=255)

                                                      tCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGt                                   <  1:7511139/93‑1 (MQ=255)

                                                         aTAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGa                                >  2:2873104/1‑93 (MQ=255)

                                                         aTAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGa                                >  1:6603726/1‑93 (MQ=255)

                                                          tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc                               >  1:2924280/1‑93 (MQ=255)

                                                          tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAc                               <  1:6390043/93‑1 (MQ=255)

                                                          tAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTCGCGCAGCCTGTTGAc                               >  1:1067535/1‑93 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              <  2:1749/93‑1 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              >  1:5403629/1‑93 (MQ=255)

                                                           aaaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACa                              <  2:448790/93‑1 (MQ=255)

                                                            aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt                             <  2:6643605/93‑1 (MQ=255)

                                                            aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt                             <  1:2419213/93‑1 (MQ=255)

                                                            aaCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAt                             <  2:2732494/93‑1 (MQ=255)

                                                             aCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACt                                               >  2:5955890/1‑74 (MQ=255)

                                                             aCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATg                            >  1:4986261/1‑93 (MQ=255)

                                                             aCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATg                            <  2:741900/93‑1 (MQ=255)

                                                              cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt                           <  1:1002455/93‑1 (MQ=255)

                                                              cTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGt                           <  1:3936319/93‑1 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGGTGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGGCATgaa                          >  1:1733464/1‑91 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          <  1:7769992/93‑1 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          <  2:4593518/93‑1 (MQ=255)

                                                               tGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTa                          >  1:3841026/1‑93 (MQ=255)

                                                                ggAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAt                         <  2:5446154/93‑1 (MQ=255)

                                                                  aaCAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTg                       <  1:1585459/93‑1 (MQ=255)

                                                                    cAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGt                     >  2:7813230/1‑93 (MQ=255)

                                                                     aGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTc                    >  2:1202662/1‑93 (MQ=255)

                                                                      gggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt                   <  1:4766927/93‑1 (MQ=255)

                                                                      gggCGACCGTGAAGGTTTGAGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCt                   >  2:6602049/1‑93 (MQ=255)

                                                                      gggCGACCGTGAAGGTTGGCGGGATGGCCCGAAAGTCCCGTTTAAAGAGATCGCCACTAAATACTGGCGCAGCCTGCTGACATGGATAGGGCt                   >  2:6994930/1‑93 (MQ=255)

                                                                       ggCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTg                  >  1:3778277/1‑93 (MQ=255)

                                                                         cGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTTAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGt                >  1:4211575/1‑93 (MQ=255)

                                                                          gACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTa               >  1:6212936/1‑93 (MQ=255)

                                                                            ccGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAt             <  2:6765925/93‑1 (MQ=255)

                                                                             cGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAAtt            >  1:6014176/1‑93 (MQ=255)

                                                                                gAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGcc         >  1:251377/1‑93 (MQ=255)

                                                                                  aGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccac       >  2:3581719/1‑93 (MQ=255)

                                                                                   ggTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGccacc      >  2:6201456/1‑93 (MQ=255)

                                                                                     tttGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCaa    <  1:7157110/93‑1 (MQ=255)

TCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACG  >  NC_000913/4328717‑4328896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  >  NC_000913/4328714‑4328900

TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG                                                                                               >  SRR4302543.5077467/1‑94 (MQ=60)

TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCG                                                                                               <  SRR4302543.6432883/94‑1 (MQ=60)

 TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGG                                                                                              <  SRR4302543.5675983/94‑1 (MQ=60)

 TATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGG                                                                                              <  SRR4302543.1199305/94‑1 (MQ=60)

  ATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGG                                                                                             <  SRR4302543.3704270/94‑1 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGCCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           <  SRR4302543.6380321/94‑1 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           <  SRR4302543.2391939/94‑1 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           >  SRR4302543.1056816/1‑94 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           <  SRR4302543.1087040/94‑1 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           >  SRR4302543.7937408/1‑94 (MQ=60)

    CGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGAT                                                                                           <  SRR4302543.3750406/94‑1 (MQ=60)

     GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302543.1231030/1‑94 (MQ=60)

     GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302543.7589284/1‑94 (MQ=60)

     GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          <  SRR4302543.5034115/94‑1 (MQ=60)

     GGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATG                                                                                          >  SRR4302543.1875498/1‑94 (MQ=60)

      GGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGG                                                                                         <  SRR4302543.194810/94‑1 (MQ=60)

       GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        <  SRR4302543.2338690/94‑1 (MQ=60)

       GCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGC                                                                                        >  SRR4302543.6579665/1‑94 (MQ=60)

        CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC                                                                                       >  SRR4302543.1665116/1‑94 (MQ=60)

        CTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCC                                                                                       <  SRR4302543.6500265/94‑1 (MQ=60)

         TTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCC                                                                                      <  SRR4302543.690574/94‑1 (MQ=60)

          TTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCG                                                                                     >  SRR4302543.2889670/1‑94 (MQ=60)

           TACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGA                                                                                    >  SRR4302543.1929406/1‑94 (MQ=60)

            ACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAA                                                                                   >  SRR4302543.6393659/1‑94 (MQ=60)

            ACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAA                                                                                   >  SRR4302543.1373769/1‑94 (MQ=60)

             CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  >  SRR4302543.5601949/1‑94 (MQ=60)

             CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  <  SRR4302543.7146502/94‑1 (MQ=60)

             CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  >  SRR4302543.5790345/1‑94 (MQ=60)

             CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  >  SRR4302543.5093155/1‑94 (MQ=60)

             CCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAA                                                                                  >  SRR4302543.3577336/1‑94 (MQ=60)

              CTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAG                                                                                 <  SRR4302543.5333022/94‑1 (MQ=60)

              CTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAG                                                                                 >  SRR4302543.2597675/1‑94 (MQ=60)

              CTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAG                                                                                 >  SRR4302543.4974922/1‑94 (MQ=60)

               TGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGT                                                                                >  SRR4302543.1432647/1‑94 (MQ=60)

               CGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGT                                                                                <  SRR4302543.3894724/94‑1 (MQ=60)

                 CGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCT                                                                              >  SRR4302543.4778316/1‑94 (MQ=60)

                  GCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTC                                                                             <  SRR4302543.18469/94‑1 (MQ=60)

                   CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            <  SRR4302543.6315132/94‑1 (MQ=60)

                   CCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCG                                                                            >  SRR4302543.1608277/1‑94 (MQ=60)

                    CATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT                                                                           >  SRR4302543.2909602/1‑94 (MQ=60)

                    CATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGT                                                                           >  SRR4302543.7915541/1‑94 (MQ=60)

                     ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302543.2876424/1‑94 (MQ=60)

                     ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          >  SRR4302543.4197717/1‑94 (MQ=60)

                     ATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTT                                                                          <  SRR4302543.5379630/94‑1 (MQ=60)

                      TGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTT                                                                         <  SRR4302543.7184287/94‑1 (MQ=60)

                       GCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTA                                                                        <  SRR4302543.7843742/94‑1 (MQ=60)

                       GCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTA                                                                        <  SRR4302543.4359540/94‑1 (MQ=60)

                        CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA                                                                       >  SRR4302543.5475617/1‑94 (MQ=60)

                        CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAA                                                                       <  SRR4302543.4395961/94‑1 (MQ=60)

                        CGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGCCTCGTTTAA                                                                       >  SRR4302543.1841711/1‑94 (MQ=60)

                         GCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAA                                                                      >  SRR4302543.4583746/1‑94 (MQ=60)

                         GCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAA                                                                      >  SRR4302543.2260885/1‑94 (MQ=60)

                          gtggaagaagCTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     <  SRR4302543.2542088/84‑1 (MQ=60)

                          CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     <  SRR4302543.2884913/94‑1 (MQ=60)

                          CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     <  SRR4302543.1994856/94‑1 (MQ=60)

                          CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     >  SRR4302543.3562353/1‑94 (MQ=60)

                          CTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAG                                                                     >  SRR4302543.3463246/1‑94 (MQ=60)

                           TGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGA                                                                    <  SRR4302543.3021328/94‑1 (MQ=60)

                            GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   >  SRR4302543.2724217/1‑94 (MQ=60)

                            GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   <  SRR4302543.810672/94‑1 (MQ=60)

                            GGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAG                                                                   <  SRR4302543.3445979/94‑1 (MQ=60)

                             GAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGA                                                                  <  SRR4302543.6660110/94‑1 (MQ=60)

                             GAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGA                                                                  <  SRR4302543.7697763/94‑1 (MQ=60)

                             GAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGA                                                                  >  SRR4302543.3815264/1‑94 (MQ=60)

                              AAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGAT                                                                 <  SRR4302543.27843/94‑1 (MQ=60)

                               AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                <  SRR4302543.6691953/94‑1 (MQ=60)

                               AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                <  SRR4302543.7829052/94‑1 (MQ=60)

                               AGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATT                                                                <  SRR4302543.2703972/94‑1 (MQ=60)

                                AAGACTCCGGCGTTCCAGCAGCATGGCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTG                                                               <  SRR4302543.4079746/94‑1 (MQ=60)

                                 AGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGC                                                              <  SRR4302543.2311558/94‑1 (MQ=60)

                                 AGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGC                                                              >  SRR4302543.6334750/1‑94 (MQ=60)

                                  GACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCC                                                             >  SRR4302543.6518275/1‑94 (MQ=60)

                                    CTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAC                                                           <  SRR4302543.6438030/94‑1 (MQ=60)

                                    CTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAC                                                           <  SRR4302543.102697/94‑1 (MQ=60)

                                    CTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCAC                                                           <  SRR4302543.5335859/94‑1 (MQ=60)

                                     TCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACT                                                          <  SRR4302543.3480548/94‑1 (MQ=60)

                                      CCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTA                                                         >  SRR4302543.7914203/1‑94 (MQ=60)

                                       CGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAA                                                        >  SRR4302543.373511/1‑94 (MQ=60)

                                       CGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAA                                                        >  SRR4302543.2176755/1‑94 (MQ=60)

                                       CGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAA                                                        <  SRR4302543.318775/94‑1 (MQ=60)

                                         GCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGGGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      <  SRR4302543.1639886/94‑1 (MQ=60)

                                         GCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAAT                                                      <  SRR4302543.2509996/94‑1 (MQ=60)

                                          CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGGGCCGGTGAAGGTTTGCGGGCTGGCCCGAAAGTATCGTTTAAAaaacatacgactaatta                                                     >  SRR4302543.6695769/1‑77 (MQ=58)

                                          CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA                                                     <  SRR4302543.3273706/94‑1 (MQ=60)

                                          CGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATA                                                     >  SRR4302543.1637375/1‑94 (MQ=60)

                                           GTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATAC                                                    >  SRR4302543.394762/1‑94 (MQ=60)

                                            TTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACT                                                   >  SRR4302543.7002286/1‑94 (MQ=60)

                                             tcttccgatctccactctAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302543.6010407/76‑1 (MQ=60)

                                             TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302543.5476214/94‑1 (MQ=60)

                                             TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  <  SRR4302543.987576/94‑1 (MQ=60)

                                             TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  >  SRR4302543.3242592/1‑94 (MQ=60)

                                             TCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTG                                                  >  SRR4302543.7762701/1‑94 (MQ=60)

                                              CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 >  SRR4302543.4740114/1‑94 (MQ=60)

                                              CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302543.4809893/94‑1 (MQ=60)

                                              CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 >  SRR4302543.5220334/1‑94 (MQ=60)

                                              CCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGG                                                 <  SRR4302543.5132341/94‑1 (MQ=60)

                                               CAGCAGCATGTCGATAAACTGGAACAGTGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302543.3147681/94‑1 (MQ=60)

                                               CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                >  SRR4302543.5571899/1‑94 (MQ=60)

                                               CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302543.3165289/94‑1 (MQ=60)

                                               CAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGC                                                <  SRR4302543.2384319/94‑1 (MQ=60)

                                                AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG                                               <  SRR4302543.1477860/94‑1 (MQ=60)

                                                AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG                                               >  SRR4302543.4230937/1‑94 (MQ=60)

                                                AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG                                               <  SRR4302543.1554357/94‑1 (MQ=60)

                                                AGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCG                                               >  SRR4302543.5367050/1‑94 (MQ=60)

                                                   AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            <  SRR4302543.5040139/94‑1 (MQ=60)

                                                   AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            <  SRR4302543.5047449/94‑1 (MQ=60)

                                                   AGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAG                                            >  SRR4302543.1435641/1‑94 (MQ=60)

                                                    GCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGC                                           >  SRR4302543.220946/1‑94 (MQ=60)

                                                      ATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTCAATACTGGCGTAGCCT                                         >  SRR4302543.2020069/1‑94 (MQ=60)

                                                        GTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGT                                       >  SRR4302543.7748588/1‑94 (MQ=60)

                                                         TCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTT                                      <  SRR4302543.7582894/94‑1 (MQ=60)

                                                         TCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTT                                      <  SRR4302543.597992/94‑1 (MQ=60)

                                                          CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     >  SRR4302543.6082155/1‑94 (MQ=60)

                                                          CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     >  SRR4302543.4399795/1‑94 (MQ=60)

                                                          CGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTG                                     >  SRR4302543.5409102/1‑94 (MQ=60)

                                                           GATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGA                                    >  SRR4302543.6665961/1‑94 (MQ=60)

                                                            ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC                                   >  SRR4302543.2950841/1‑94 (MQ=60)

                                                            ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGAC                                   <  SRR4302543.6148490/94‑1 (MQ=60)

                                                            ATAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTCGCGCAGCCTGTTGAC                                   >  SRR4302543.1077129/1‑94 (MQ=60)

                                                             TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA                                  >  SRR4302543.5452759/1‑94 (MQ=60)

                                                             TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA                                  >  SRR4302543.4872374/1‑94 (MQ=60)

                                                             TAAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACA                                  <  SRR4302543.6450193/94‑1 (MQ=60)

                                                              AAACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACAT                                 <  SRR4302543.1412840/94‑1 (MQ=60)

                                                               ATCTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302543.6206078/94‑1 (MQ=60)

                                                               AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302543.867855/94‑1 (MQ=60)

                                                               AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                >  SRR4302543.4310917/1‑94 (MQ=60)

                                                               AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                <  SRR4302543.2441059/94‑1 (MQ=60)

                                                               AACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATG                                >  SRR4302543.5031646/1‑94 (MQ=60)

                                                                ACTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGT                               >  SRR4302543.7277530/1‑94 (MQ=60)

                                                                 CTGGAACAGGGCGACCGTGAAGGTTTGCGGGGTGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGGCATGAA                              >  SRR4302543.1748914/1‑94 (MQ=60)

                                                                 CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              <  SRR4302543.1011314/94‑1 (MQ=60)

                                                                 CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              >  SRR4302543.3874935/1‑94 (MQ=60)

                                                                 CTGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTA                              <  SRR4302543.3971102/94‑1 (MQ=60)

                                                                  TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT                             >  SRR4302543.191937/1‑94 (MQ=60)

                                                                  TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT                             >  SRR4302543.289693/1‑94 (MQ=60)

                                                                  TGGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAT                             <  SRR4302543.7843296/94‑1 (MQ=60)

                                                                   GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            >  SRR4302543.1046543/1‑94 (MQ=60)

                                                                   GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            <  SRR4302543.7568564/94‑1 (MQ=60)

                                                                   GGAACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATT                            >  SRR4302543.1738415/1‑94 (MQ=60)

                                                                     AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG                          <  SRR4302543.1599615/94‑1 (MQ=60)

                                                                     AACAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGG                          <  SRR4302543.51686/94‑1 (MQ=60)

                                                                       CAGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTC                        <  SRR4302543.5465019/94‑1 (MQ=60)

                                                                        AGGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCT                       <  SRR4302543.6757291/94‑1 (MQ=60)

                                                                         GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG                      <  SRR4302543.4810492/94‑1 (MQ=60)

                                                                         GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG                      >  SRR4302543.3811541/1‑94 (MQ=60)

                                                                         GGGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGCATTGGTCTG                      >  SRR4302543.3811542/1‑94 (MQ=60)

                                                                         AGGCGACCGTGAAGGTTTGCGGGATGGCCGGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTG                      <  SRR4302543.4810491/94‑1 (MQ=60)

                                                                          GGCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGG                     <  SRR4302543.2558204/94‑1 (MQ=60)

                                                                           GCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTTAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGT                    >  SRR4302543.4249765/1‑94 (MQ=60)

                                                                           GCGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGT                    <  SRR4302543.288275/94‑1 (MQ=60)

                                                                            CGACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTA                   >  SRR4302543.6271596/1‑94 (MQ=60)

                                                                             GACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGGCATGTATTGGTCTGGTAA                  >  SRR4302543.2146592/1‑94 (MQ=60)

                                                                             GACCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAA                  >  SRR4302543.5687691/1‑94 (MQ=60)

                                                                               CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                <  SRR4302543.1609282/94‑1 (MQ=60)

                                                                               CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                >  SRR4302543.7331322/1‑94 (MQ=60)

                                                                               CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                >  SRR4302543.6069751/1‑94 (MQ=60)

                                                                               CCGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACCGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATT                >  SRR4302543.3815218/1‑94 (MQ=60)

                                                                                CGTGATGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG               <  SRR4302543.6723434/94‑1 (MQ=60)

                                                                                CGTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGATATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTG               <  SRR4302543.1023364/94‑1 (MQ=60)

                                                                                 GTGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGC              >  SRR4302543.2477353/1‑94 (MQ=60)

                                                                                  TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC             >  SRR4302543.253564/1‑94 (MQ=60)

                                                                                  TGAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCC             >  SRR4302543.6329097/1‑94 (MQ=60)

                                                                                   GAAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCA            <  SRR4302543.1174084/94‑1 (MQ=60)

                                                                                    AAGGTTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCAC           >  SRR4302543.340983/1‑94 (MQ=60)

                                                                                        TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC       <  SRR4302543.7226666/94‑1 (MQ=60)

                                                                                        TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC       <  SRR4302543.2910123/94‑1 (MQ=60)

                                                                                        TTTGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAAC       <  SRR4302543.3809126/94‑1 (MQ=60)

                                                                                          TGCGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGT     <  SRR4302543.6462512/94‑1 (MQ=60)

                                                                                            CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGA   >  SRR4302543.4937161/1‑94 (MQ=60)

                                                                                            CGGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTAGTGGTCTGGTAATCGCCACCAACGTGA   >  SRR4302543.7085589/1‑94 (MQ=60)

                                                                                             GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  <  SRR4302543.7328118/94‑1 (MQ=60)

                                                                                             GGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  <  SRR4302543.4638258/94‑1 (MQ=60)

TTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGAC  >  NC_000913/4328714‑4328900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`