Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,357,661 |
A→G |
intergenic (‑52/+313) |
cadB ← / ← cadC |
transport of lysine/cadaverine/CadC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,357,661 | 0 | A | G | 100.0%
| 727.4
/ NA
| 224 | intergenic (‑52/+313) | cadB/cadC | transport of lysine/cadaverine/CadC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/131); total (93/131) |
Only 100 of 225 total aligned reads displayed.
GGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC > NC_000913/4357571‑4357750
|
gTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTa < 1:672301/93‑1 (MQ=255)
gTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTa < 1:485920/93‑1 (MQ=255)
tACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTAt > 2:950898/1‑93 (MQ=255)
aGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTc < 2:586613/93‑1 (MQ=255)
ggCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTcc > 2:2575831/1‑93 (MQ=255)
aaaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTga > 1:1931751/1‑93 (MQ=255)
aaaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTga < 2:2547425/93‑1 (MQ=255)
aaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgac > 2:3479297/1‑93 (MQ=255)
aaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgac > 2:2945243/1‑93 (MQ=255)
tAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgacca < 1:3613583/93‑1 (MQ=255)
gCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgaccaga < 1:14612/93‑1 (MQ=255)
cccGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgaccagac < 2:332865/93‑1 (MQ=255)
gATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaa > 1:112013/1‑93 (MQ=255)
gATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaa > 1:3239259/1‑93 (MQ=255)
aTCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaaa < 1:4469705/93‑1 (MQ=255)
tcttctTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAAc > 2:669748/1‑93 (MQ=255)
tcttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTgg > 1:464452/1‑93 (MQ=255)
tcttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTgg < 1:4173900/93‑1 (MQ=255)
cttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGc < 1:1019084/93‑1 (MQ=255)
ttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCg < 2:1839922/93‑1 (MQ=255)
ggCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGAt < 2:3585767/93‑1 (MQ=255)
gCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATa < 2:2664260/93‑1 (MQ=255)
gCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATa < 1:3930401/93‑1 (MQ=255)
cAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATaa < 2:4247856/93‑1 (MQ=255)
cAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATaa < 2:1010364/93‑1 (MQ=255)
aGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAg < 2:2087356/93‑1 (MQ=255)
aGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAg < 2:1955266/93‑1 (MQ=255)
gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa < 2:2861865/93‑1 (MQ=255)
gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa < 2:3495779/93‑1 (MQ=255)
gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa < 1:1785222/93‑1 (MQ=255)
aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt > 2:2878217/1‑93 (MQ=255)
aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt > 2:252085/1‑93 (MQ=255)
aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt < 2:2987712/93‑1 (MQ=255)
cTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTa > 2:1187802/1‑93 (MQ=255)
tCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAc < 1:3199697/93‑1 (MQ=255)
tCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAc > 1:1310878/1‑93 (MQ=255)
cATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACt < 2:1075384/93‑1 (MQ=255)
tGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCa > 2:4124946/1‑93 (MQ=255)
ctctTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACg > 1:3118394/1‑93 (MQ=255)
tcttctCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGa > 1:2233692/1‑93 (MQ=255)
tcttctCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGa < 1:1177868/93‑1 (MQ=255)
ctcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaa < 2:4588621/93‑1 (MQ=255)
ctcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGAACAAACTGGCGATAAGATTACTCACGaaaaa > 1:2314446/1‑93 (MQ=255)
tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaaa < 1:4000764/93‑1 (MQ=255)
tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaaa < 2:3776080/93‑1 (MQ=255)
tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGAGAAGATTACTCACGaaaaaa < 2:4579407/93‑1 (MQ=255)
ccTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAg > 1:3988315/1‑93 (MQ=255)
cTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAACAAgg > 2:3262283/1‑93 (MQ=255)
tAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGa < 1:4257511/93‑1 (MQ=255)
tAATTTCATTTGTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGa < 2:1880261/93‑1 (MQ=255)
aTTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGAtt > 2:272417/1‑93 (MQ=255)
ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa < 1:3791308/93‑1 (MQ=255)
ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa < 1:905378/93‑1 (MQ=255)
ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa < 2:1522969/93‑1 (MQ=255)
tCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAt < 1:3451446/93‑1 (MQ=255)
cATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATc > 2:1252178/1‑93 (MQ=255)
aTTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATcc > 2:1541577/1‑93 (MQ=255)
aTTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATcc > 1:2576451/1‑93 (MQ=255)
ttttGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTa < 1:3293449/93‑1 (MQ=255)
tttGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTaa > 2:4147559/1‑93 (MQ=255)
gAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGa < 1:1865138/93‑1 (MQ=255)
gAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGa < 2:321956/93‑1 (MQ=255)
tttGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTa < 2:236364/93‑1 (MQ=255)
ttGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAg < 1:3385997/93‑1 (MQ=255)
tGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAgg < 2:3030885/93‑1 (MQ=255)
ggAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGt < 1:2881628/93‑1 (MQ=255)
aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa < 2:1508906/93‑1 (MQ=255)
aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa < 2:1110988/93‑1 (MQ=255)
aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa < 2:4218276/93‑1 (MQ=255)
gTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGaa < 1:4565208/93‑1 (MQ=255)
ccGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAAt < 1:620598/93‑1 (MQ=255)
gggTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATaa < 1:1592675/93‑1 (MQ=255)
gggTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATaa < 1:3506264/93‑1 (MQ=255)
gTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAaca > 2:3373832/1‑93 (MQ=255)
gTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAaca < 1:3337249/93‑1 (MQ=255)
tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac > 1:1384923/1‑93 (MQ=255)
tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac < 1:1075175/93‑1 (MQ=255)
tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac > 2:2450613/1‑93 (MQ=255)
tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac < 2:1353953/93‑1 (MQ=255)
cATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAAcaca < 1:2359051/93‑1 (MQ=255)
atgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaa > 1:2657852/1‑93 (MQ=255)
atgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaa > 2:1347847/1‑93 (MQ=255)
tgatgTATAGCTATTTCCTGACCAGACCAACCTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa < 1:1482730/93‑1 (MQ=255)
tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa > 1:945186/1‑93 (MQ=255)
tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa < 1:3630955/93‑1 (MQ=255)
tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa > 2:1669314/1‑93 (MQ=255)
gatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaaa < 1:2702801/93‑1 (MQ=255)
atgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAg > 2:2280674/1‑93 (MQ=255)
tgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGt < 1:822999/93‑1 (MQ=255)
tgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGt < 2:761537/93‑1 (MQ=255)
gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt > 2:1770845/1‑93 (MQ=255)
gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt > 1:554522/1‑93 (MQ=255)
gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt < 2:316388/93‑1 (MQ=255)
tataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGttt > 1:3891963/1‑93 (MQ=255)
tataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGttt < 1:4594014/93‑1 (MQ=255)
ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTGACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc > 1:2509779/1‑93 (MQ=255)
ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc < 2:4402246/93‑1 (MQ=255)
ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc > 2:1786694/1‑93 (MQ=255)
ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc > 1:201454/1‑93 (MQ=255)
ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc > 2:864090/1‑93 (MQ=255)
|
GGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC > NC_000913/4357571‑4357750
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCTGTA > NC_000913/4357568‑4357754
|
ACCGGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAG < SRR4302535.4166654/94‑1 (MQ=60)
GTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTAT < SRR4302535.676993/94‑1 (MQ=60)
GTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTAT < SRR4302535.2462455/94‑1 (MQ=60)
GTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTAT < SRR4302535.489327/94‑1 (MQ=60)
CAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTC > SRR4302535.1175056/1‑94 (MQ=60)
AGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCC > SRR4302535.187825/1‑94 (MQ=60)
CAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGA > SRR4302535.1945671/1‑94 (MQ=60)
AAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGAC < SRR4302535.3695520/94‑1 (MQ=60)
ATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCA > SRR4302535.365338/1‑94 (MQ=60)
TAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAG < SRR4302535.179968/94‑1 (MQ=60)
TAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAG < SRR4302535.3638637/94‑1 (MQ=60)
AGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCAAGATGTATAGCTATTTCCTGACCAGA > SRR4302535.4559804/1‑94 (MQ=60)
GCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGAC < SRR4302535.14717/94‑1 (MQ=60)
CGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCA > SRR4302535.912761/1‑94 (MQ=60)
CGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAA > SRR4302535.3261751/1‑94 (MQ=60)
CGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAA > SRR4302535.1596544/1‑94 (MQ=60)
CGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAA > SRR4302535.112801/1‑94 (MQ=60)
GATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAA > SRR4302535.4169911/1‑94 (MQ=60)
GATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAA > SRR4302535.1391092/1‑94 (MQ=60)
GATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAA > SRR4302535.4619862/1‑94 (MQ=60)
ATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAAC < SRR4302535.4500374/94‑1 (MQ=60)
TCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACT < SRR4302535.2293406/94‑1 (MQ=60)
TCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACT < SRR4302535.944646/94‑1 (MQ=60)
CTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTG > SRR4302535.3928403/1‑94 (MQ=60)
TTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGG > SRR4302535.467697/1‑94 (MQ=60)
TTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGG < SRR4302535.4040739/94‑1 (MQ=60)
TCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGC < SRR4302535.4202467/94‑1 (MQ=60)
CTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCG < SRR4302535.1026324/94‑1 (MQ=60)
CTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTAGCG > SRR4302535.4277769/1‑94 (MQ=60)
GCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAA < SRR4302535.3957240/94‑1 (MQ=60)
CAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAG > SRR4302535.965314/1‑94 (MQ=60)
AGACCTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGA < SRR4302535.60457/94‑1 (MQ=60)
GAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAT > SRR4302535.2368025/1‑94 (MQ=60)
GAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAT < SRR4302535.2015215/94‑1 (MQ=60)
GAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAT < SRR4302535.1798141/94‑1 (MQ=60)
ACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTA < SRR4302535.3294061/94‑1 (MQ=60)
ACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTA > SRR4302535.1482085/1‑94 (MQ=60)
CTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAC > SRR4302535.1320248/1‑94 (MQ=60)
CTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAC > SRR4302535.3194020/1‑94 (MQ=60)
TCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACT < SRR4302535.3221849/94‑1 (MQ=60)
CATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTC > SRR4302535.1962571/1‑94 (MQ=60)
CATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTC < SRR4302535.173638/94‑1 (MQ=60)
ATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCA > SRR4302535.3374871/1‑94 (MQ=60)
ATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCA < SRR4302535.4371502/94‑1 (MQ=60)
GCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACG > SRR4302535.3512865/1‑94 (MQ=60)
GCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACG > SRR4302535.3140105/1‑94 (MQ=60)
CTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGA > SRR4302535.2249577/1‑94 (MQ=60)
TCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAA < SRR4302535.1186271/94‑1 (MQ=60)
CTNCNNNTNATNTCA‑TTTTNGNNNTTGGAGNCCGGGTCANGANGTATANCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAA < SRR4302535.848510/94‑1 (MQ=60)
TTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAA > SRR4302535.1225837/1‑94 (MQ=60)
TCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGAACAAACTGGCGATAAGATTACTCACGAAAAA > SRR4302535.2331005/1‑94 (MQ=60)
TCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAG < SRR4302535.3509099/94‑1 (MQ=60)
TCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAG < SRR4302535.4028134/94‑1 (MQ=60)
TCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAG > SRR4302535.4015588/1‑94 (MQ=60)
CCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGG < SRR4302535.564229/94‑1 (MQ=60)
TAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGAT < SRR4302535.4286679/94‑1 (MQ=60)
AATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATT < SRR4302535.4683578/94‑1 (MQ=60)
TTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAT < SRR4302535.911803/94‑1 (MQ=60)
TTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAT < SRR4302535.3543509/94‑1 (MQ=60)
TTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAT > SRR4302535.2869912/1‑94 (MQ=60)
TTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAT < SRR4302535.3817448/94‑1 (MQ=60)
TCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATC < SRR4302535.3475436/94‑1 (MQ=60)
CA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCC > SRR4302535.2594968/1‑94 (MQ=60)
A‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCT < SRR4302535.4652151/94‑1 (MQ=60)
A‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCT < SRR4302535.4016138/94‑1 (MQ=60)
A‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCT > SRR4302535.2554281/1‑94 (MQ=60)
TTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAA < SRR4302535.3316346/94‑1 (MQ=60)
TTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAG < SRR4302535.1111902/94‑1 (MQ=60)
GAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGAT < SRR4302535.1878583/94‑1 (MQ=60)
ATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTA > SRR4302535.4624014/1‑94 (MQ=60)
TTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAG < SRR4302535.3965436/94‑1 (MQ=60)
TTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGG < SRR4302535.3884420/94‑1 (MQ=60)
TTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGG < SRR4302535.3409559/94‑1 (MQ=60)
GGAGTCCGTGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTG < SRR4302535.2739003/94‑1 (MQ=60)
GGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTG < SRR4302535.2902023/94‑1 (MQ=60)
GAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGA < SRR4302535.3886366/94‑1 (MQ=60)
GTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAA < SRR4302535.4596356/94‑1 (MQ=60)
TCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTGCTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAAT < SRR4302535.2959388/94‑1 (MQ=60)
TCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAAT < SRR4302535.2429654/94‑1 (MQ=60)
TCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAAT < SRR4302535.1214171/94‑1 (MQ=60)
CCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATA < SRR4302535.624911/94‑1 (MQ=60)
CCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATA < SRR4302535.626986/94‑1 (MQ=60)
GGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAAC < SRR4302535.3530631/94‑1 (MQ=60)
GGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAAC < SRR4302535.1604170/94‑1 (MQ=60)
GGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACA > SRR4302535.14434/1‑94 (MQ=60)
GTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACAC < SRR4302535.3360492/94‑1 (MQ=60)
GTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACAC > SRR4302535.3278803/1‑94 (MQ=60)
GTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACAC > SRR4302535.1394808/1‑94 (MQ=60)
TCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACA < SRR4302535.1082816/94‑1 (MQ=60)
CATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAA < SRR4302535.2375977/94‑1 (MQ=60)
CATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAA > SRR4302535.2676896/1‑94 (MQ=60)
ATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAA > SRR4302535.951879/1‑94 (MQ=60)
TGATGTATAGCTATTTCCTGACCAGACCAACCTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAA < SRR4302535.1493333/94‑1 (MQ=60)
TGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAA < SRR4302535.3656126/94‑1 (MQ=60)
TGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAA > SRR4302535.2067550/1‑94 (MQ=60)
GATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAG < SRR4302535.1063555/94‑1 (MQ=60)
GATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAG < SRR4302535.2722110/94‑1 (MQ=60)
GATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAG < SRR4302535.2708358/94‑1 (MQ=60)
GATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAACGATTAATCCTAAAGATTAGGTGAAATAACACAAAAG < SRR4302535.342563/94‑1 (MQ=60)
GATGTATAGCTATTTCCTGACCAGACCAAACGGGCGATAAGATTACTCACGAAAAAAGGATTAAGCCTAAAGATTAGGTGAAATAACACAAAAG < SRR4302535.3259702/94‑1 (MQ=60)
TGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTT > SRR4302535.809652/1‑94 (MQ=60)
TGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTT < SRR4302535.828768/94‑1 (MQ=60)
TGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTT < SRR4302535.2674867/94‑1 (MQ=60)
TGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTT > SRR4302535.558410/1‑94 (MQ=60)
GTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTT > SRR4302535.3918647/1‑94 (MQ=60)
TATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTGACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC > SRR4302535.2527872/1‑94 (MQ=60)
TATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC > SRR4302535.202832/1‑94 (MQ=60)
TATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC < SRR4302535.4625279/94‑1 (MQ=60)
TATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC < SRR4302535.3354665/94‑1 (MQ=60)
ATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCT < SRR4302535.156746/94‑1 (MQ=60)
ATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCT < SRR4302535.861038/94‑1 (MQ=60)
ATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCT < SRR4302535.516174/94‑1 (MQ=60)
TAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCTG < SRR4302535.4673196/94‑1 (MQ=60)
GCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCTGTA > SRR4302535.3110794/1‑94 (MQ=60)
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ACCGGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCA‑TTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTCTGTA > NC_000913/4357568‑4357754
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
