Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,363,427 |
T→C |
T309A (ACT→GCT) |
dcuA ← |
anaerobic dicarboxylate transport |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,363,427 | 0 | T | C | 100.0%
| 729.4
/ NA
| 229 | T309A (ACT→GCT) | dcuA | anaerobic dicarboxylate transport |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/103); total (126/103) |
Only 100 of 235 total aligned reads displayed.
AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA > NC_000913/4363337‑4363516
|
agaagaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCAt > 2:2522879/1‑93 (MQ=255)
agaagaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCAt > 2:4096159/1‑93 (MQ=255)
gaagaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATc < 2:3747125/93‑1 (MQ=255)
gaagaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAAAGAAAGCATCgtc > 2:1872087/1‑91 (MQ=255)
gaTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAg > 1:453840/1‑93 (MQ=255)
aTGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGc < 1:3230127/93‑1 (MQ=255)
gACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCa < 1:3892038/93‑1 (MQ=255)
aCGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCAc > 2:4321753/1‑93 (MQ=255)
ggCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGc < 1:3810608/93‑1 (MQ=255)
gCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCa > 2:3495739/1‑93 (MQ=255)
gCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCa > 1:1727395/1‑93 (MQ=255)
cagcagCCACGGATGACCCTGAATCTCTTCACCAGCGGTATCTTTGATCCAGTCGAGGTTGTTTGAAACGAAAGCATCGCCCAGCCACGCAac < 2:929836/93‑1 (MQ=255)
cagcagCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAac < 2:19851/93‑1 (MQ=255)
agcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAaca < 1:2408392/93‑1 (MQ=255)
agcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAaca < 2:715661/93‑1 (MQ=255)
gcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAacac > 2:2341112/1‑93 (MQ=255)
gcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAacac > 2:2774922/1‑93 (MQ=255)
gcagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAacac < 1:4184200/93‑1 (MQ=255)
cagcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAcc < 2:624677/93‑1 (MQ=255)
agcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAccc > 1:2853609/1‑93 (MQ=255)
agcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAccc < 2:2613326/93‑1 (MQ=255)
agcCACGGATGACCCTGAAACACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAccc < 1:2899092/93‑1 (MQ=255)
gcCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCa > 2:4071625/1‑93 (MQ=255)
ccACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAg < 1:1178025/93‑1 (MQ=255)
ccACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGACGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAg < 1:3304077/93‑1 (MQ=255)
aCGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGa > 2:4345740/1‑93 (MQ=255)
aCGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGa > 1:2375562/1‑93 (MQ=255)
cGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAt < 1:100653/93‑1 (MQ=255)
ggATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATa < 2:89224/93‑1 (MQ=255)
gATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATAc > 2:4623886/1‑93 (MQ=255)
gATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATAc < 1:3344103/93‑1 (MQ=255)
gATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATAc > 2:3394292/1‑93 (MQ=255)
aTGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACa > 2:1473419/1‑93 (MQ=255)
gACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACaaa < 1:764506/93‑1 (MQ=255)
gACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACaaa < 1:1920002/93‑1 (MQ=255)
cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa < 2:1515818/93‑1 (MQ=255)
cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa > 1:2607731/1‑93 (MQ=255)
cTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACa < 1:196285/93‑1 (MQ=255)
gAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAgg > 2:1409536/1‑93 (MQ=255)
gAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAgg > 2:530772/1‑93 (MQ=255)
gAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAgg > 2:3992288/1‑93 (MQ=255)
gAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAgg > 1:486783/1‑93 (MQ=255)
aaTCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGgc > 2:4563373/1‑93 (MQ=255)
aTCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGgcg > 1:853563/1‑93 (MQ=255)
ttCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAt > 1:4295351/1‑93 (MQ=255)
ttCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAt > 1:3909463/1‑93 (MQ=255)
aCCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATAcc < 2:4163114/93‑1 (MQ=255)
ccAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCt > 2:3900076/1‑93 (MQ=255)
ccAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCt > 2:3367537/1‑93 (MQ=255)
aGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGc < 1:3992823/93‑1 (MQ=255)
gCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCt < 1:2483093/93‑1 (MQ=255)
cGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCtt < 1:3678684/93‑1 (MQ=255)
ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCttt < 1:3950034/93‑1 (MQ=255)
ggTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCttt > 2:4358828/1‑93 (MQ=255)
gTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTg > 2:1000221/1‑93 (MQ=255)
gTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTg > 1:1617550/1‑93 (MQ=255)
tATCTTTGATCAAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAAGCGCTCATACCTGCTTTGa > 2:2242287/1‑93 (MQ=255)
aTCTTTGTTCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGaa > 1:711618/1‑93 (MQ=255)
tCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAg < 2:2658757/93‑1 (MQ=255)
cTTTGATCCAGTGGATGTTGTTGAAAACGAAAGCATCGCCCAGCCACGCAACCCCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAgg < 2:3702557/93‑1 (MQ=255)
cTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAgg < 1:600804/93‑1 (MQ=255)
tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGt > 2:4233357/1‑93 (MQ=255)
tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGt < 2:1260987/93‑1 (MQ=255)
tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGt > 1:40739/1‑93 (MQ=255)
tttGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACACAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGt > 2:298538/1‑93 (MQ=255)
tGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGc > 1:1868773/1‑93 (MQ=255)
tCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTgg > 1:1263356/1‑93 (MQ=255)
tCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTgg > 2:3217572/1‑93 (MQ=255)
cAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAg > 2:3814708/1‑93 (MQ=255)
cgTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGt < 2:2921108/92‑1 (MQ=255)
gTNGATGTTGTTGGAAACGAAANCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGtt < 1:3438939/93‑1 (MQ=255)
gATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAg > 2:1721325/1‑93 (MQ=255)
gATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAg > 1:3757236/1‑93 (MQ=255)
aTGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAgg > 1:4636186/1‑93 (MQ=255)
tgttgtTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAggg > 2:3533768/1‑92 (MQ=255)
gttgttGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAgggt < 1:1049680/93‑3 (MQ=255)
tgttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGgtgt < 2:3017598/93‑1 (MQ=255)
ttgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGtgttg > 1:2553036/1‑93 (MQ=255)
tgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGtgttgt > 1:3223746/1‑93 (MQ=255)
tgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGtgttgt < 1:249665/93‑1 (MQ=255)
tgGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGtgttgt < 1:2647149/93‑1 (MQ=255)
ggAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGtgttgtg > 1:3515597/1‑92 (MQ=255)
ggAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTc > 2:117402/1‑93 (MQ=255)
ggAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTc < 1:1105514/93‑1 (MQ=255)
gAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCg > 1:3151833/1‑93 (MQ=255)
gAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCg > 2:3476980/1‑93 (MQ=255)
aaaCGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCgg < 2:4287385/93‑1 (MQ=255)
aaaCGAAAGCAGCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCgg < 2:2310901/93‑1 (MQ=255)
aaCGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGt > 2:793150/1‑93 (MQ=255)
aaCGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGt > 2:1622383/1‑93 (MQ=255)
cGAAAGCATCGCCCTGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAt > 2:2864705/1‑93 (MQ=255)
cGAAAGCATCGCCCAGCGACGCAGCACCCAGGATACAAATACAGGCGCTCATGCCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAt < 1:140439/93‑1 (MQ=255)
cGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAt > 1:2427029/1‑93 (MQ=255)
cGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGCAGTTGAGGGTGTTGTCGGTAt < 2:2982829/93‑1 (MQ=255)
gAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATc < 2:4028969/93‑1 (MQ=255)
gAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATc > 2:1576991/1‑93 (MQ=255)
aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCTGTATCg > 2:1043716/1‑93 (MQ=255)
aaaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCg > 2:2900453/1‑93 (MQ=255)
aaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGa < 1:2111305/93‑1 (MQ=255)
aaGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGa < 1:3576785/93‑1 (MQ=255)
|
AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGA > NC_000913/4363337‑4363516
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGACTTT > NC_000913/4363334‑4363520
|
CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGC < SRR4302535.4132980/94‑1 (MQ=60)
CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGC < SRR4302535.2281389/94‑1 (MQ=60)
CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGC > SRR4302535.1512221/1‑94 (MQ=60)
AAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCA < SRR4302535.3980201/94‑1 (MQ=60)
AAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCA > SRR4302535.92668/1‑94 (MQ=60)
AAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGTAACGAAAGCAT > SRR4302535.3252213/1‑94 (MQ=60)
AAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCAT < SRR4302535.4236774/94‑1 (MQ=60)
AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATC > SRR4302535.369790/1‑94 (MQ=60)
AGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATC > SRR4302535.3936468/1‑94 (MQ=60)
AAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCG < SRR4302535.2513314/94‑1 (MQ=60)
AAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGC > SRR4302535.1981106/1‑94 (MQ=60)
GAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGAGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCA > SRR4302535.336089/1‑94 (MQ=60)
AAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCA < SRR4302535.4164063/94‑1 (MQ=60)
AGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAG > SRR4302535.457021/1‑94 (MQ=60)
AGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAG > SRR4302535.816331/1‑94 (MQ=60)
ATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCC < SRR4302535.3252519/94‑1 (MQ=60)
GACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCAC < SRR4302535.3918722/94‑1 (MQ=60)
GGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCA < SRR4302535.3836901/94‑1 (MQ=60)
GGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCA > SRR4302535.1739882/1‑94 (MQ=60)
CCAGCAGCCGCGGATGTCCCTGAATCGCTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAAC < SRR4302535.814271/94‑1 (MQ=60)
CAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACA > SRR4302535.2680497/1‑94 (MQ=60)
AGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAC < SRR4302535.2425731/94‑1 (MQ=60)
AGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAC > SRR4302535.1631048/1‑94 (MQ=60)
AGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACAC > SRR4302535.1614374/1‑94 (MQ=60)
GCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACC > SRR4302535.401521/1‑94 (MQ=60)
GCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACC < SRR4302535.4212828/94‑1 (MQ=60)
CAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCC > SRR4302535.2873824/1‑94 (MQ=60)
AGCCACGGATGACCCTGAAACACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCA < SRR4302535.2919590/94‑1 (MQ=60)
GCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAG < SRR4302535.3175558/94‑1 (MQ=60)
CCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGG > SRR4302535.3160754/1‑94 (MQ=60)
CCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGG < SRR4302535.1186428/94‑1 (MQ=60)
CCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGACGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGG < SRR4302535.3327054/94‑1 (MQ=60)
CACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGA > SRR4302535.2589144/1‑94 (MQ=60)
CACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGA > SRR4302535.2392629/1‑94 (MQ=60)
ACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGAT < SRR4302535.345571/94‑1 (MQ=60)
CGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATA < SRR4302535.101363/94‑1 (MQ=60)
GATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACA < SRR4302535.3367399/94‑1 (MQ=60)
ATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTCGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAA < SRR4302535.3321044/94‑1 (MQ=60)
TGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAA > SRR4302535.2270139/1‑94 (MQ=60)
GACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAAT < SRR4302535.1933841/94‑1 (MQ=60)
GACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAAT < SRR4302535.769889/94‑1 (MQ=60)
ACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATA > SRR4302535.2479348/1‑94 (MQ=60)
CCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAC < SRR4302535.724353/94‑1 (MQ=60)
CCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATAC > SRR4302535.1904459/1‑94 (MQ=60)
CCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACA > SRR4302535.2626440/1‑94 (MQ=60)
CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG < SRR4302535.4144660/94‑1 (MQ=60)
CTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG < SRR4302535.197635/94‑1 (MQ=60)
CTGAATCACTGCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAG < SRR4302535.3880563/94‑1 (MQ=60)
TGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGG > SRR4302535.490196/1‑94 (MQ=60)
GAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGC < SRR4302535.3920928/94‑1 (MQ=60)
GAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGC < SRR4302535.957051/94‑1 (MQ=60)
AATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACATCCAGGATACAAATACAGGCG < SRR4302535.1959395/94‑1 (MQ=60)
AATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCG > SRR4302535.859576/1‑94 (MQ=60)
ATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGC > SRR4302535.516770/1‑94 (MQ=60)
CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT > SRR4302535.4324741/1‑94 (MQ=60)
CTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCAT > SRR4302535.3936236/1‑94 (MQ=60)
TTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATA < SRR4302535.1139816/94‑1 (MQ=60)
CACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACC < SRR4302535.1185987/94‑1 (MQ=60)
CACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACC > SRR4302535.4614962/1‑94 (MQ=60)
ACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCT > SRR4302535.1043895/1‑94 (MQ=60)
ACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCT > SRR4302535.1858895/1‑94 (MQ=60)
AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT > SRR4302535.3949182/1‑94 (MQ=60)
AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT < SRR4302535.1111442/94‑1 (MQ=60)
AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT < SRR4302535.4020136/94‑1 (MQ=60)
AGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCT > SRR4302535.3476227/1‑94 (MQ=60)
GCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTT < SRR4302535.2500996/94‑1 (MQ=60)
CGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTT > SRR4302535.1576130/1‑94 (MQ=60)
CGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTT < SRR4302535.3704145/94‑1 (MQ=60)
CGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTT > SRR4302535.1930176/1‑94 (MQ=60)
GGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTG > SRR4302535.1629202/1‑94 (MQ=60)
GGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTG < SRR4302535.3977002/94‑1 (MQ=60)
TATCTTTGTTCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAA > SRR4302535.716614/1‑94 (MQ=60)
TCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGG < SRR4302535.2882351/94‑1 (MQ=60)
CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGT < SRR4302535.605006/94‑1 (MQ=60)
CTTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGT > SRR4302535.41048/1‑94 (MQ=60)
TTTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTG < SRR4302535.3805689/94‑1 (MQ=60)
TTGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGC > SRR4302535.1882244/1‑94 (MQ=60)
TGATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCT < SRR4302535.2405475/94‑1 (MQ=60)
GATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTG > SRR4302535.3589642/1‑94 (MQ=60)
ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG > SRR4302535.3243702/1‑94 (MQ=60)
ATCCAGTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGG > SRR4302535.1272396/1‑94 (MQ=60)
GTNGATGTTGTTGGAAACGAAANCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG < SRR4302535.3462858/94‑1 (MQ=60)
GTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG > SRR4302535.1350690/1‑94 (MQ=60)
GTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG > SRR4302535.621899/1‑94 (MQ=60)
GTCGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTG < SRR4302535.3774469/94‑1 (MQ=60)
CGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG > SRR4302535.3783218/1‑94 (MQ=60)
CGATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAG < SRR4302535.257673/94‑1 (MQ=60)
GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG > SRR4302535.3819117/1‑94 (MQ=60)
GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG > SRR4302535.4667634/1‑94 (MQ=60)
GATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGG > SRR4302535.4030520/1‑94 (MQ=60)
ATGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGG < SRR4302535.2655171/94‑1 (MQ=60)
TGTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGT < SRR4302535.4710060/94‑1 (MQ=60)
GTTGTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTG < SRR4302535.1057146/94‑1 (MQ=60)
GTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTG > SRR4302535.2571417/1‑94 (MQ=60)
GTTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTG > SRR4302535.2465505/1‑94 (MQ=60)
TTGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGT > SRR4302535.3246094/1‑94 (MQ=60)
TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTG > SRR4302535.3540025/1‑94 (MQ=60)
TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTC < SRR4302535.2666110/94‑1 (MQ=60)
TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTC < SRR4302535.2520151/94‑1 (MQ=60)
TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTC < SRR4302535.2343354/94‑1 (MQ=60)
TGGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTC < SRR4302535.251385/94‑1 (MQ=60)
GGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCG < SRR4302535.1113413/94‑1 (MQ=60)
GGAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCG > SRR4302535.3173736/1‑94 (MQ=60)
GAAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGG > SRR4302535.532933/1‑94 (MQ=60)
GAAACGAAAGCAGCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGG < SRR4302535.3552983/94‑1 (MQ=60)
AAACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGT > SRR4302535.2438535/1‑94 (MQ=60)
ACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAT > SRR4302535.2444518/1‑94 (MQ=60)
ACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAT < SRR4302535.4389030/94‑1 (MQ=60)
ACGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTAT > SRR4302535.4312944/1‑94 (MQ=60)
CGAAAGCATCGCCCAGCGACGCAGCACCCAGGATACAAATACAGGCGCTCATGCCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATC < SRR4302535.141425/94‑1 (MQ=60)
CGAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATC > SRR4302535.4562417/1‑94 (MQ=60)
GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATGCCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCG < SRR4302535.2841689/94‑1 (MQ=60)
GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCG < SRR4302535.1224316/94‑1 (MQ=60)
GAAAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCG > SRR4302535.3344487/1‑94 (MQ=60)
AAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGAC < SRR4302535.2126533/94‑1 (MQ=60)
AAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGAC > SRR4302535.2353408/1‑94 (MQ=60)
AAGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGAC < SRR4302535.3601582/94‑1 (MQ=60)
AGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGACT < SRR4302535.4185133/94‑1 (MQ=60)
AGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGACT > SRR4302535.4366079/1‑94 (MQ=60)
AGCATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGACT < SRR4302535.240712/94‑1 (MQ=60)
CATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGGTGTTGTCGGTATCGACTTT > SRR4302535.2233004/1‑94 (MQ=60)
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CAAAGAAGAAGATGACGGCCAGCAGCCACGGATGACCCTGAATCACTTCACCAGCGGTATCTTTGATCCAGTCGATGTTGTTGGAAACGAAAGTATCGCCCAGCCACGCAACACCCAGGATACAAATACAGGCGCTCATACCTGCTTTGAAGGTGCTGGAGTTGAGGATGTTGTCGGTATCGACTTT > NC_000913/4363334‑4363520
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
