Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,258 |
A→G |
intergenic (‑268/‑8) |
yjeH ← / → mopB |
putative transport/GroES |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,258 | 0 | A | G | 100.0%
| 742.9
/ NA
| 233 | intergenic (‑268/‑8) | yjeH/mopB | putative transport/GroES |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/124); total (109/124) |
Only 100 of 250 total aligned reads displayed.
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA > NC_000913/4368168‑4368347
|
gAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTTTAAAAGGAGGGt > 2:3582143/1‑93 (MQ=255)
gAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGt > 1:4195553/1‑93 (MQ=255)
aGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAACGGAGGGTTa > 2:2603199/1‑93 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAt > 1:4120379/1‑93 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAt > 2:1402439/1‑93 (MQ=255)
ccTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATc < 2:2692971/93‑1 (MQ=255)
ccTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATc > 1:1871458/1‑93 (MQ=255)
cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa > 1:4005704/1‑93 (MQ=255)
cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa < 1:1931232/93‑1 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa < 1:311779/93‑1 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa > 1:3754027/1‑93 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa < 2:493183/93‑1 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa > 2:3146548/1‑93 (MQ=255)
tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGATCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATcca > 1:4559724/1‑91 (MQ=255)
cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAt > 1:703813/1‑93 (MQ=255)
cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAt < 1:1384881/93‑1 (MQ=255)
aTCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATg < 2:1586266/93‑1 (MQ=255)
aTCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATg > 1:4453837/1‑93 (MQ=255)
aTCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATg > 1:3421793/1‑93 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa > 1:1758429/1‑93 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGa > 2:291122/1‑93 (MQ=255)
cccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAat > 1:1581354/1‑93 (MQ=255)
ccATTTCTCTGGTCACCAGCCGGGAAGCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata < 1:1099504/93‑1 (MQ=255)
ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata > 1:2436716/1‑93 (MQ=255)
ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata < 2:2264080/93‑1 (MQ=255)
aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt > 1:3855736/1‑93 (MQ=255)
ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTc < 1:3026501/93‑1 (MQ=255)
ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTc < 1:2521692/93‑1 (MQ=255)
tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc < 1:3062385/93‑1 (MQ=255)
tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc > 2:3110592/1‑93 (MQ=255)
ctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCa < 1:4310820/93‑1 (MQ=255)
ctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCa < 2:775905/93‑1 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAt < 1:3223665/93‑1 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAt > 2:403384/1‑93 (MQ=255)
tCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGc < 2:339811/93‑1 (MQ=255)
cAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGa < 1:521039/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 2:2794902/93‑1 (MQ=255)
aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt < 2:2887157/93‑1 (MQ=255)
gCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc < 1:773243/93‑1 (MQ=255)
gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc < 2:1273171/93‑1 (MQ=255)
gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc > 1:2734191/1‑93 (MQ=255)
gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc < 1:659823/93‑1 (MQ=255)
cGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgc > 2:3917262/1‑93 (MQ=255)
cGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgc < 1:2342719/93‑1 (MQ=255)
gggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgcg < 1:3981542/93‑1 (MQ=255)
ggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGt < 2:2297042/93‑1 (MQ=255)
aaaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGa < 2:3363534/93‑1 (MQ=255)
aaCCACGTAAGCTCCGGCGTCCCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt < 1:1628262/93‑1 (MQ=255)
aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt < 1:2469707/93‑1 (MQ=255)
aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt < 1:4063643/93‑1 (MQ=255)
cACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGt > 1:2768414/1‑93 (MQ=255)
cACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGt < 1:354913/93‑1 (MQ=255)
gTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCaa < 1:3208165/93‑1 (MQ=255)
tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg > 2:3494952/1‑93 (MQ=255)
gCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGt > 2:2111507/1‑93 (MQ=255)
cTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTa < 2:1318570/93‑1 (MQ=255)
tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa > 2:2680429/1‑93 (MQ=255)
tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa < 2:3754027/93‑1 (MQ=255)
tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGGCCATTGCATGATCGCGTGATCGTCAAGCGTaa > 1:572831/1‑93 (MQ=255)
ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa < 1:178521/93‑1 (MQ=255)
ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa < 1:897674/93‑1 (MQ=255)
ggCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaaga < 2:1183150/93‑1 (MQ=255)
gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa < 2:3454225/93‑1 (MQ=255)
cGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaag < 1:1698507/93‑1 (MQ=255)
cGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaag > 1:4597056/1‑93 (MQ=255)
gTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGt > 2:4316086/1‑93 (MQ=255)
tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt < 2:1091569/93‑1 (MQ=255)
tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt > 1:3584642/1‑93 (MQ=255)
tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt < 1:3529702/93‑1 (MQ=255)
cACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTg > 1:2179273/1‑93 (MQ=255)
aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATTAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAATTTGa < 2:988833/93‑1 (MQ=255)
aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa < 1:4411037/93‑1 (MQ=255)
cATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGATAc > 2:2958434/1‑93 (MQ=255)
cATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAc < 1:1104399/93‑1 (MQ=255)
tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTa < 2:2234645/93‑1 (MQ=255)
cAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAt < 2:4543712/93‑1 (MQ=255)
cAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAt < 2:4472282/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 2:2436698/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:3412163/93‑1 (MQ=255)
aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc < 1:3937511/93‑1 (MQ=255)
gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct < 2:3879452/93‑1 (MQ=255)
gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct < 1:2013579/93‑1 (MQ=255)
gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct > 2:1615854/1‑93 (MQ=255)
tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc < 2:241919/93‑1 (MQ=255)
aCGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgct < 1:2832974/93‑1 (MQ=255)
ggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTgg < 2:1989244/93‑1 (MQ=255)
gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggc > 2:1713718/1‑93 (MQ=255)
gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggc < 2:1800405/93‑1 (MQ=255)
tttCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcggc > 2:3362055/1‑93 (MQ=255)
tttCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcggc < 2:885342/93‑1 (MQ=255)
tctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt < 2:3935488/93‑1 (MQ=255)
tcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCg > 1:2234439/1‑93 (MQ=255)
aaaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGtt < 2:584354/93‑1 (MQ=255)
aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc > 2:2327949/1‑93 (MQ=255)
aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc > 2:1448847/1‑93 (MQ=255)
aaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTc < 2:3164274/93‑1 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 2:709456/1‑93 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 1:1252448/1‑93 (MQ=255)
aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt > 2:2485870/1‑93 (MQ=255)
gaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGa < 2:2776544/93‑1 (MQ=255)
|
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA > NC_000913/4368168‑4368347
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > NC_000913/4368165‑4368351
|
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG > SRR4302535.567902/1‑94 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG > SRR4302535.494094/1‑94 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG < SRR4302535.1893003/94‑1 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG > SRR4302535.3138503/1‑94 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG < SRR4302535.1634022/94‑1 (MQ=60)
CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT < SRR4302535.1174251/94‑1 (MQ=60)
CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT > SRR4302535.4224265/1‑94 (MQ=60)
CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT < SRR4302535.4264134/94‑1 (MQ=60)
CGAAGCCTCATCCACATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT > SRR4302535.3277509/1‑94 (MQ=60)
AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT > SRR4302535.4148577/1‑94 (MQ=60)
GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC < SRR4302535.3246322/94‑1 (MQ=60)
GCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATC > SRR4302535.1884945/1‑94 (MQ=60)
CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA > SRR4302535.4033106/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302535.3780000/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA < SRR4302535.1945151/94‑1 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302535.1385326/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302535.574854/1‑94 (MQ=60)
CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGATCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCCA > SRR4302535.4590850/1‑94 (MQ=60)
CTCATCCCCATTTCTATGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA > SRR4302535.2416533/1‑94 (MQ=60)
TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT < SRR4302535.313939/94‑1 (MQ=60)
TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT > SRR4302535.708748/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG > SRR4302535.4484382/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG > SRR4302535.3203931/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG > SRR4302535.3445592/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG > SRR4302535.1111287/1‑94 (MQ=60)
CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG < SRR4302535.1394766/94‑1 (MQ=60)
ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA > SRR4302535.1771140/1‑94 (MQ=60)
ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA < SRR4302535.1773045/94‑1 (MQ=60)
TCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAA < SRR4302535.1617511/94‑1 (MQ=60)
CCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAAT > SRR4302535.1592769/1‑94 (MQ=60)
CCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAAT > SRR4302535.2116567/1‑94 (MQ=60)
CCTATTTCTCTGGTCACCAGCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGTACTTTCTCAAAGGAGGGTTATCAATGAATA < SRR4302535.1975323/94‑1 (MQ=60)
CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA > SRR4302535.2454273/1‑94 (MQ=60)
CCATTTCTCTGGTCACCAGCCGGGAAGCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT < SRR4302535.1107359/94‑1 (MQ=60)
CCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT < SRR4302535.2341134/94‑1 (MQ=60)
CCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAT > SRR4302535.4351103/1‑94 (MQ=60)
CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT < SRR4302535.2213416/94‑1 (MQ=60)
CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT > SRR4302535.3882286/1‑94 (MQ=60)
CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT > SRR4302535.666565/1‑94 (MQ=60)
CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAGAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT < SRR4302535.2531616/94‑1 (MQ=60)
ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC < SRR4302535.3589675/94‑1 (MQ=60)
TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT > SRR4302535.609845/1‑94 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC < SRR4302535.2539862/94‑1 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC < SRR4302535.2555160/94‑1 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC < SRR4302535.3047690/94‑1 (MQ=60)
CTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCC > SRR4302535.441937/1‑94 (MQ=60)
TCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCA < SRR4302535.4478479/94‑1 (MQ=60)
TCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCA < SRR4302535.3083797/94‑1 (MQ=60)
TCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCA < SRR4302535.4485019/94‑1 (MQ=60)
CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT > SRR4302535.3929040/1‑94 (MQ=60)
CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT < SRR4302535.4340308/94‑1 (MQ=60)
TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT < SRR4302535.3246013/94‑1 (MQ=60)
TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT > SRR4302535.2841380/1‑94 (MQ=60)
GTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC > SRR4302535.4143012/1‑94 (MQ=60)
CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAT < SRR4302535.3139104/94‑1 (MQ=60)
CAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAT < SRR4302535.524684/94‑1 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC > SRR4302535.84169/1‑94 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC < SRR4302535.3240666/94‑1 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC > SRR4302535.1887291/1‑94 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC > SRR4302535.2753702/1‑94 (MQ=60)
AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACAGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC > SRR4302535.2332713/1‑94 (MQ=60)
GCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG < SRR4302535.778682/94‑1 (MQ=60)
GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG < SRR4302535.4491602/94‑1 (MQ=60)
GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG < SRR4302535.664426/94‑1 (MQ=60)
CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG < SRR4302535.2359484/94‑1 (MQ=60)
GGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGT < SRR4302535.4008743/94‑1 (MQ=60)
GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG < SRR4302535.179723/94‑1 (MQ=60)
AACCACGTAAGCTCCGGCGTCCCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC < SRR4302535.1640019/94‑1 (MQ=60)
AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC < SRR4302535.4091453/94‑1 (MQ=60)
AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC < SRR4302535.2487512/94‑1 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT < SRR4302535.16675/94‑1 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT < SRR4302535.3804370/94‑1 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT < SRR4302535.3436515/94‑1 (MQ=60)
CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT > SRR4302535.2788124/1‑94 (MQ=60)
CACGTAAGCTCCGGCGTCACCCTTAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTC > SRR4302535.4221337/1‑94 (MQ=60)
CACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTC < SRR4302535.357363/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG < SRR4302535.4668414/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG < SRR4302535.3230385/94‑1 (MQ=60)
GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG > SRR4302535.2787498/1‑94 (MQ=60)
TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC < SRR4302535.1945092/94‑1 (MQ=60)
TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC < SRR4302535.3804768/94‑1 (MQ=60)
TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTCATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC < SRR4302535.755829/94‑1 (MQ=60)
AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG < SRR4302535.2463124/94‑1 (MQ=60)
AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG < SRR4302535.3003118/94‑1 (MQ=60)
AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG < SRR4302535.3969035/94‑1 (MQ=60)
AGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGT > SRR4302535.3539868/1‑94 (MQ=60)
CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGGCCATTGCATGATCGCGTGATCGTCAAGCGTAA > SRR4302535.576853/1‑94 (MQ=60)
TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTCCATGATCGCGTGATCATCAATCGTAAA > SRR4302535.2685285/1‑94 (MQ=60)
CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG < SRR4302535.179761/94‑1 (MQ=60)
CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG < SRR4302535.904037/94‑1 (MQ=60)
GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG > SRR4302535.4628330/1‑94 (MQ=60)
CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT < SRR4302535.1710783/94‑1 (MQ=60)
GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTTAAGCGTAAAGAAGTT > SRR4302535.1760761/1‑94 (MQ=60)
GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT > SRR4302535.1501293/1‑94 (MQ=60)
GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT > SRR4302535.3492847/1‑94 (MQ=60)
GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT > SRR4302535.3609501/1‑94 (MQ=60)
TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG > SRR4302535.2194831/1‑94 (MQ=60)
TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG < SRR4302535.3554212/94‑1 (MQ=60)
TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG < SRR4302535.3554211/94‑1 (MQ=60)
ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA < SRR4302535.3165119/94‑1 (MQ=60)
ACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAA < SRR4302535.4441227/94‑1 (MQ=60)
CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC > SRR4302535.4209413/1‑94 (MQ=60)
CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACT < SRR4302535.1112289/94‑1 (MQ=60)
ACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT < SRR4302535.4065169/94‑1 (MQ=60)
ACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT < SRR4302535.4010716/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302535.3964366/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302535.4646802/94‑1 (MQ=60)
AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT < SRR4302535.3435905/94‑1 (MQ=60)
GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG < SRR4302535.2028085/94‑1 (MQ=60)
TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT < SRR4302535.2466092/94‑1 (MQ=60)
ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG > SRR4302535.3975660/1‑94 (MQ=60)
ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG > SRR4302535.3066848/1‑94 (MQ=60)
ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG < SRR4302535.2853083/94‑1 (MQ=60)
CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG > SRR4302535.646480/1‑94 (MQ=60)
CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG < SRR4302535.3779064/94‑1 (MQ=60)
GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG > SRR4302535.4286376/1‑94 (MQ=60)
GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG > SRR4302535.4615857/1‑94 (MQ=60)
ACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGG > SRR4302535.1254123/1‑94 (MQ=60)
CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC > SRR4302535.3573874/1‑94 (MQ=60)
TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT < SRR4302535.4038773/94‑1 (MQ=60)
CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG < SRR4302535.748473/94‑1 (MQ=60)
CTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCG > SRR4302535.2250335/1‑94 (MQ=60)
CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT > SRR4302535.968122/1‑94 (MQ=60)
CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT < SRR4302535.279618/94‑1 (MQ=60)
CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT > SRR4302535.1651581/1‑94 (MQ=60)
CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT > SRR4302535.125248/1‑94 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302535.3077254/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT < SRR4302535.2107471/94‑1 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT > SRR4302535.147643/1‑94 (MQ=60)
AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT > SRR4302535.1261404/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302535.4536558/1‑94 (MQ=60)
AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC > SRR4302535.1110949/1‑94 (MQ=60)
GGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCG > SRR4302535.529472/1‑94 (MQ=60)
GGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > SRR4302535.624471/1‑94 (MQ=60)
GGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > SRR4302535.2419794/1‑94 (MQ=60)
|
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG > NC_000913/4368165‑4368351
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
