Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,183	A→G	Q194R (CAG→CGG)	mopA →	GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,183	0	A	G	99.7%	1056.9 / ‑5.3	338	Q194R (CAG→CGG)	mopA	GroEL
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (164/173); total (164/174)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.16e-01

Only 100 of 348 total aligned reads displayed.

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG  >  NC_000913/4369093‑4369272

aaGCGATGGACAAAGTCGGGAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGt                                                                                         <  1:2737204/93‑1 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                       >  1:6120653/1‑93 (MQ=255)

      tGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAcc                                                                                   <  2:65908/93‑1 (MQ=255)

      tGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAcc                                                                                   >  1:663840/1‑93 (MQ=255)

       ggACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCg                                                                                  <  2:6780877/93‑1 (MQ=255)

        gACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGATGGTACTGGTCTGCAGGACGATCTGGATGTGGTTGAAGGTATGCAGTTCGACCGt                                                                                 <  2:612438/93‑1 (MQ=255)

        gACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGt                                                                                 <  1:2425922/93‑1 (MQ=255)

           aaaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGc                                                                              <  1:1626535/93‑1 (MQ=255)

             aGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTa                                                                            <  2:1989115/93‑1 (MQ=255)

              gTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAc                                                                           >  1:3893229/1‑93 (MQ=255)

               tCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAcc                                                                          >  1:7880504/1‑93 (MQ=255)

                cGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCt                                                                         >  2:7796380/1‑93 (MQ=255)

                cGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCt                                                                         <  2:1821467/93‑1 (MQ=255)

                  gTAAAGAAGGCGTTATCACCGTTGAACACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGAATGCGGTTAGACCGTGGCTTCCTGt                                                                       >  1:742631/1‑93 (MQ=255)

                     aagaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGtctc                                                                    >  2:5368877/1‑93 (MQ=255)

                     aagaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGtctc                                                                    >  2:5615316/1‑93 (MQ=255)

                      agaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                   <  1:6716994/93‑1 (MQ=255)

                         agGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTa                                                                >  2:6292652/1‑93 (MQ=255)

                         agGCGTTATCACCGTAGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTa                                                                <  2:4564207/93‑1 (MQ=255)

                          ggCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAc                                                               >  2:2488339/1‑93 (MQ=255)

                          ggCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAc                                                               >  1:5656296/1‑93 (MQ=255)

                            cGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACtt                                                             <  1:7723/93‑1 (MQ=255)

                             gTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtc                                                            >  2:5471033/1‑93 (MQ=255)

                             gTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtc                                                            >  2:1793541/1‑93 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtca                                                           >  1:5420976/1‑93 (MQ=255)

                               tATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcat                                                          >  2:2154903/1‑93 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                        <  1:4467997/93‑1 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                        <  2:5026729/93‑1 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGGGGTTAAAGGAATGCGGTTCGACCGTGGCTACCTGCCTCCTTACTtcatca                                                        >  1:1343588/1‑93 (MQ=255)

                                  cACCTTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaa                                                       <  1:96594/93‑1 (MQ=255)

                                   aCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaac                                                      >  2:3679934/1‑93 (MQ=255)

                                   aCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaac                                                      <  2:3869217/93‑1 (MQ=255)

                                   aCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaac                                                      <  1:7251217/93‑1 (MQ=255)

                                   aCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaac                                                      >  2:7913198/1‑93 (MQ=255)

                                   aCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaaa                                                      >  1:2226610/1‑92 (MQ=255)

                                    ccGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaaca                                                     <  2:6837308/93‑1 (MQ=255)

                                     cGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaacaa                                                    <  2:1862218/93‑1 (MQ=255)

                                     cGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaacaa                                                    <  2:4541859/93‑1 (MQ=255)

                                      gTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAg                                                   <  2:6213326/93‑1 (MQ=255)

                                      gTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAg                                                   >  1:1894110/1‑93 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                  >  2:6976413/1‑93 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                  >  1:3731778/1‑93 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                  <  1:4994164/93‑1 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                  >  1:2091918/1‑93 (MQ=255)

                                        tGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGcc                                                 <  1:5327902/93‑1 (MQ=255)

                                         gAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCg                                                <  1:6849604/93‑1 (MQ=255)

                                          aaGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCgg                                               >  1:3248679/1‑93 (MQ=255)

                                           aGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGa                                              >  2:157837/1‑93 (MQ=255)

                                           aGACGGTACCGGTCTGCAGGACAAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGa                                              >  2:3416872/1‑93 (MQ=255)

                                            gACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGaa                                             <  2:1698040/93‑1 (MQ=255)

                                             aCGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGaaa                                            <  1:1231151/93‑1 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTg                                         >  1:4373184/1‑93 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTg                                         >  1:149326/1‑93 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTg                                         >  2:2610091/1‑93 (MQ=255)

                                                     ggccTGCAGGACGAACTGGACGTGGTTGAAGGTATCCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCa                                    <  2:5836995/90‑1 (MQ=255)

                                                      gTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAg                                   >  2:3219849/1‑93 (MQ=255)

                                                       tCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGt                                  <  1:7565011/93‑1 (MQ=255)

                                                        cTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTa                                 <  1:3603623/93‑1 (MQ=255)

                                                        cTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTa                                 <  1:7243957/93‑1 (MQ=255)

                                                          gCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGa                               <  2:1388905/93‑1 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                             >  2:6624592/1‑93 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                             >  2:766262/1‑93 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCTTCACAAAGCCGGAACCTGGCGCAGAAGAAcg                            >  1:3078208/1‑92 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGaagt                            <  1:3302381/93‑3 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                            >  1:6316933/1‑93 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                            >  2:125446/1‑93 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                            <  1:4725070/93‑1 (MQ=255)

                                                              gACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTg                           >  1:2050661/1‑93 (MQ=255)

                                                                 gAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaa                        >  2:5076885/1‑93 (MQ=255)

                                                                 gAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaa                        >  1:6265404/1‑93 (MQ=255)

                                                                  aaCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaaa                       >  2:4161819/1‑93 (MQ=255)

                                                                  aaCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaaa                       <  1:4841491/93‑1 (MQ=255)

                                                                   aCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAg                      >  2:2306026/1‑93 (MQ=255)

                                                                     tGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGcc                    >  1:6202999/1‑93 (MQ=255)

                                                                     tGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGcc                    <  2:2797251/93‑1 (MQ=255)

                                                                     tGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGcc                    >  1:4807629/1‑93 (MQ=255)

                                                                     tGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGcc                    <  2:5312793/93‑1 (MQ=255)

                                                                      ggACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGccc                   >  2:6030693/1‑93 (MQ=255)

                                                                       gACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCg                  >  2:4228148/1‑93 (MQ=255)

                                                                       gACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCg                  >  1:2957870/1‑93 (MQ=255)

                                                                        aCGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGCAAGCCCGt                 >  1:7190783/1‑93 (MQ=255)

                                                                          gTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTc               >  1:6037041/1‑93 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa              >  1:4016822/1‑93 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa              <  1:868867/93‑1 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa              <  1:3564776/93‑1 (MQ=255)

                                                                              ttGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATcc           <  2:3558232/93‑1 (MQ=255)

                                                                               tGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCct          <  2:2972773/93‑1 (MQ=255)

                                                                               tGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCct          >  1:7501358/1‑93 (MQ=255)

                                                                                 aaGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgc        >  2:844208/1‑93 (MQ=255)

                                                                                 aaGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgc        <  1:5871216/93‑1 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg      >  1:2784420/1‑93 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg      <  2:3991757/93‑1 (MQ=255)

                                                                                    gTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctgg     <  1:420079/93‑1 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCCACAAGCCGGAAACTAGCGCAGTAGAACTGGAACGCCCGTTCATTCTgctggc    >  2:5231042/1‑93 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggc    >  2:4761137/1‑93 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggc    >  2:7408418/1‑93 (MQ=255)

                                                                                     tATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggc    <  1:7072989/93‑1 (MQ=255)

                                                                                      aTGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggct   <  1:4131930/93‑1 (MQ=255)

                                                                                      aTGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgccggct   >  2:7243898/1‑93 (MQ=255)

                                                                                       tGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggctg  >  2:6940998/1‑93 (MQ=255)

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG  >  NC_000913/4369093‑4369272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  NC_000913/4369090‑4369276

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGAGTTATCACCGTTGAAGCCGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCG                                                                                               >  SRR4302543.2646170/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              >  SRR4302543.2149221/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              >  SRR4302543.6593378/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              <  SRR4302543.2000048/94‑1 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              >  SRR4302543.555490/1‑94 (MQ=60)

 TGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              <  SRR4302543.4109488/94‑1 (MQ=60)

 CGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGG                                                                                              <  SRR4302543.62402/94‑1 (MQ=60)

  GAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGT                                                                                             <  SRR4302543.7573816/94‑1 (MQ=60)

   AAGCGATGGACAAAGTCGGGAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTT                                                                                            <  SRR4302543.2762107/94‑1 (MQ=60)

    AGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTC                                                                                           >  SRR4302543.3981724/1‑94 (MQ=60)

    AGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTC                                                                                           >  SRR4302543.6178622/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302543.7315423/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGA                                                                                         >  SRR4302543.3385625/1‑94 (MQ=60)

      CGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCCGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTTGA                                                                                         >  SRR4302543.7166406/1‑94 (MQ=60)

       GATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAC                                                                                        <  SRR4302543.3277864/94‑1 (MQ=60)

       GATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAC                                                                                        <  SRR4302543.88952/94‑1 (MQ=60)

        ATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACC                                                                                       >  SRR4302543.669947/1‑94 (MQ=60)

        ATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACC                                                                                       >  SRR4302543.6289682/1‑94 (MQ=60)

          GGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGT                                                                                     >  SRR4302543.6220866/1‑94 (MQ=60)

           GACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302543.2131832/94‑1 (MQ=60)

           GACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302543.2015948/94‑1 (MQ=60)

           GACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTG                                                                                    <  SRR4302543.2447817/94‑1 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302543.7270316/1‑94 (MQ=60)

             CAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGC                                                                                  >  SRR4302543.4056611/1‑94 (MQ=60)

              AAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCT                                                                                 <  SRR4302543.1641026/94‑1 (MQ=60)

                AGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAC                                                                               >  SRR4302543.2097092/1‑94 (MQ=60)

                AGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAC                                                                               >  SRR4302543.3927604/1‑94 (MQ=60)

                 GTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACC                                                                              <  SRR4302543.4960583/94‑1 (MQ=60)

                 GTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACC                                                                              >  SRR4302543.7954667/1‑94 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            <  SRR4302543.2130929/94‑1 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            >  SRR4302543.401639/1‑94 (MQ=60)

                   CGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTG                                                                            <  SRR4302543.7134752/94‑1 (MQ=60)

                    GGTAAAGAAGGCGTTATCACCGTTGAACACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGAATGCGGTTAGACCGTGGCTTCCTGT                                                                           >  SRR4302543.749252/1‑94 (MQ=60)

                       AAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTC                                                                        >  SRR4302543.7124350/1‑94 (MQ=60)

                       AAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTC                                                                        >  SRR4302543.1567612/1‑94 (MQ=60)

                       AAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTC                                                                        >  SRR4302543.7256280/1‑94 (MQ=60)

                        AAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCC                                                                       >  SRR4302543.4227388/1‑94 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      >  SRR4302543.2279155/1‑94 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302543.6719662/94‑1 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302543.6780481/94‑1 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302543.6780482/94‑1 (MQ=60)

                         AGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302543.6927204/94‑1 (MQ=60)

                         AGAAGACGTTATCTCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCT                                                                      <  SRR4302543.7938700/94‑1 (MQ=60)

                          GAAGGCGTTATCACTGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302543.2859758/94‑1 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302543.1526888/94‑1 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302543.525445/94‑1 (MQ=60)

                          GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTT                                                                     <  SRR4302543.3876131/94‑1 (MQ=60)

                           AAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTC                                                                    >  SRR4302543.6326751/1‑94 (MQ=60)

                            AGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGATCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAC                                                                   >  SRR4302543.2558776/1‑94 (MQ=60)

                            AGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAC                                                                   <  SRR4302543.3612740/94‑1 (MQ=60)

                            AGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTAC                                                                   >  SRR4302543.5707876/1‑94 (MQ=60)

                             GGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACT                                                                  >  SRR4302543.4551809/1‑94 (MQ=60)

                               CGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTC                                                                <  SRR4302543.7791/94‑1 (MQ=60)

                               CGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGGATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTC                                                                >  SRR4302543.3075945/1‑94 (MQ=60)

                               CGTTATCACCGTTGAAGACGGCACCGGTCTGCAGGACAGACTGGACGTAGTTGAAGGTATGCGGGTCGACCGTAGCTACCTGGCTCCTTTCTTC                                                                >  SRR4302543.5789654/1‑94 (MQ=53)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.2108240/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.1293981/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.885367/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.7992928/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.5470266/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCA                                                               >  SRR4302543.4508110/1‑94 (MQ=60)

                                GTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCGACCTGTCTCCTTACTTCA                                                               >  SRR4302543.4210/1‑94 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              <  SRR4302543.4735207/94‑1 (MQ=60)

                                 TTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAT                                                              >  SRR4302543.7670459/1‑94 (MQ=60)

                                  TATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATC                                                             <  SRR4302543.6227637/94‑1 (MQ=60)

                                   ATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCA                                                            <  SRR4302543.545848/94‑1 (MQ=60)

                                   ATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGGGGTTAAAGGAATGCGGTTCGACCGTGGCTACCTGCCTCCTTACTTCATCA                                                            >  SRR4302543.1355591/1‑94 (MQ=60)

                                    TCCCCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAA                                                           <  SRR4302543.2358154/94‑1 (MQ=60)

                                    TCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAA                                                           <  SRR4302543.4508509/94‑1 (MQ=60)

                                     CACCTTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          <  SRR4302543.97494/94‑1 (MQ=60)

                                     CACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          >  SRR4302543.3563859/1‑94 (MQ=60)

                                     CACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          >  SRR4302543.7893988/1‑94 (MQ=60)

                                     CACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAC                                                          <  SRR4302543.4109200/94‑1 (MQ=60)

                                     CACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAAA                                                          >  SRR4302543.2246711/1‑94 (MQ=60)

                                      ACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACA                                                         >  SRR4302543.7300356/1‑94 (MQ=60)

                                      ACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACA                                                         <  SRR4302543.7321340/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        <  SRR4302543.544415/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        <  SRR4302543.7320586/94‑1 (MQ=60)

                                       CCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAA                                                        >  SRR4302543.6139192/1‑94 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       <  SRR4302543.5931017/94‑1 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       <  SRR4302543.4403974/94‑1 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       >  SRR4302543.5572224/1‑94 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       >  SRR4302543.1911141/1‑94 (MQ=60)

                                        CGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAG                                                       <  SRR4302543.153657/94‑1 (MQ=60)

                                         GTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGC                                                      >  SRR4302543.3764596/1‑94 (MQ=60)

                                         GTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGC                                                      >  SRR4302543.2110607/1‑94 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302543.7274631/94‑1 (MQ=60)

                                          TTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302543.5039626/94‑1 (MQ=60)

                                          TGGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCC                                                     <  SRR4302543.5771806/94‑1 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    >  SRR4302543.7465747/1‑94 (MQ=60)

                                           TGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCG                                                    <  SRR4302543.5376076/94‑1 (MQ=60)

                                            GAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGG                                                   <  SRR4302543.6914218/94‑1 (MQ=60)

                                            GAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGG                                                   >  SRR4302543.3278051/1‑94 (MQ=60)

                                             AAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGA                                                  >  SRR4302543.3667606/1‑94 (MQ=60)

                                              AGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAA                                                 <  SRR4302543.7502932/94‑1 (MQ=60)

                                              AGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAA                                                 >  SRR4302543.4861200/1‑94 (MQ=60)

                                               GACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAA                                                >  SRR4302543.630210/1‑94 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302543.5246752/94‑1 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302543.1242215/94‑1 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               <  SRR4302543.1287408/94‑1 (MQ=60)

                                                ACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAC                                               >  SRR4302543.203981/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302543.150623/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302543.4412797/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             >  SRR4302543.4412804/1‑94 (MQ=60)

                                                  GGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTG                                             <  SRR4302543.4465398/94‑1 (MQ=60)

                                                   GTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGG                                            >  SRR4302543.7634592/1‑94 (MQ=60)

                                                   GTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGG                                            <  SRR4302543.760581/94‑1 (MQ=60)

                                                    TACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC                                           >  SRR4302543.4385964/1‑94 (MQ=60)

                                                    TACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC                                           >  SRR4302543.4826726/1‑94 (MQ=60)

                                                     ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCG                                          <  SRR4302543.6581918/94‑1 (MQ=60)

                                                        GGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAG                                       <  SRR4302543.3612209/94‑1 (MQ=60)

                                                        GGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAG                                       >  SRR4302543.1847169/1‑94 (MQ=60)

                                                         GTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGT                                      <  SRR4302543.3254444/94‑1 (MQ=60)

                                                         GTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGT                                      <  SRR4302543.7493881/94‑1 (MQ=60)

                                                          TCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTA                                     <  SRR4302543.7637006/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302543.3262620/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    >  SRR4302543.3328912/1‑94 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302543.7314051/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302543.3635424/94‑1 (MQ=60)

                                                           CTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAG                                    <  SRR4302543.5371735/94‑1 (MQ=60)

                                                            TGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGA                                   >  SRR4302543.2800864/1‑94 (MQ=60)

                                                              gaggacgataTGGACGTGATTGAAGATATGCGGTTCAACCGTGGCTAACTGTCTCCTGACTTCATCAACAAGCGGGAAACTGGCGCAGTAGAAC                                 <  SRR4302543.6176082/84‑1 (MQ=57)

                                                              CAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAC                                 <  SRR4302543.6368073/94‑1 (MQ=60)

                                                              CAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAC                                 >  SRR4302543.2614163/1‑94 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCTTCACAAAGCCGGAACCTGGCGCAGAAGAACG                                >  SRR4302543.3105889/1‑94 (MQ=60)

                                                               AGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACT                                >  SRR4302543.6376342/1‑94 (MQ=60)

                                                                GGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAGTG                               <  SRR4302543.3332180/94‑1 (MQ=60)

                                                                GGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTG                               <  SRR4302543.6361503/94‑1 (MQ=60)

                                                                GGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTG                               >  SRR4302543.2069025/1‑94 (MQ=60)

                                                                GGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTG                               <  SRR4302543.4768248/94‑1 (MQ=60)

                                                                 GACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGG                              >  SRR4302543.3640789/1‑94 (MQ=60)

                                                                   CGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAA                            <  SRR4302543.3079196/94‑1 (MQ=60)

                                                                   CGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAA                            >  SRR4302543.6324480/1‑94 (MQ=60)

                                                                     AACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAG                          <  SRR4302543.4885636/94‑1 (MQ=60)

                                                                      ACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGC                         >  SRR4302543.7564162/1‑94 (MQ=60)

                                                                       CTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCC                        >  SRR4302543.6261575/1‑94 (MQ=60)

                                                                       CTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCC                        >  SRR4302543.4851747/1‑94 (MQ=60)

                                                                       CTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCC                        >  SRR4302543.4851538/1‑94 (MQ=60)

                                                                        TGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302543.2900321/94‑1 (MQ=60)

                                                                        TGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302543.6074924/94‑1 (MQ=60)

                                                                        TGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302543.14108/94‑1 (MQ=60)

                                                                        TGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTATCCTTACTTCATCAACAAGCAGGAAACTGGCGCAGTAGAACTGGAAAGCCC                       <  SRR4302543.6074925/94‑1 (MQ=60)

                                                                         GGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCG                      >  SRR4302543.2984719/1‑94 (MQ=60)

                                                                          GACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGCAAGCCCGT                     >  SRR4302543.7260526/1‑94 (MQ=60)

                                                                          GACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGT                     >  SRR4302543.788396/1‑94 (MQ=60)

                                                                           ACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTT                    <  SRR4302543.2197999/94‑1 (MQ=60)

                                                                            CGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTC                   >  SRR4302543.6094038/1‑94 (MQ=60)

                                                                            CGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTC                   >  SRR4302543.7593211/1‑94 (MQ=60)

                                                                            CGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTC                   <  SRR4302543.150164/94‑1 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCA                  >  SRR4302543.401843/1‑94 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCA                  >  SRR4302543.4052695/1‑94 (MQ=60)

                                                                             GTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAATGGAAAGCCCGTTCA                  >  SRR4302543.676354/1‑94 (MQ=60)

                                                                              TGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 <  SRR4302543.876622/94‑1 (MQ=60)

                                                                              TGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 <  SRR4302543.6856372/94‑1 (MQ=60)

                                                                              TGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCAT                 <  SRR4302543.3596325/94‑1 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               >  SRR4302543.6248540/1‑94 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               <  SRR4302543.380595/94‑1 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               >  SRR4302543.3701033/1‑94 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               >  SRR4302543.547373/1‑94 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               <  SRR4302543.7390532/94‑1 (MQ=60)

                                                                                GTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCC               >  SRR4302543.7664339/1‑94 (MQ=60)

                                                                                 TTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCT              >  SRR4302543.7573083/1‑94 (MQ=60)

                                                                                 TTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCT              <  SRR4302543.1888407/94‑1 (MQ=60)

                                                                                  TGNANGNATNCGGTTCGACCGNNGCNACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTG             <  SRR4302543.481590/94‑1 (MQ=60)

                                                                                  TGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTG             >  SRR4302543.278458/1‑94 (MQ=60)

                                                                                  TGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTG             >  SRR4302543.806449/1‑94 (MQ=60)

                                                                                   GAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGC            >  SRR4302543.4830842/1‑94 (MQ=60)

                                                                                    AAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCT           <  SRR4302543.5924683/94‑1 (MQ=60)

                                                                                    AAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCT           <  SRR4302543.3292190/94‑1 (MQ=60)

                                                                                    AAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCAACAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCT           <  SRR4302543.3411352/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          >  SRR4302543.4819784/1‑94 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302543.2581026/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          <  SRR4302543.5532147/94‑1 (MQ=60)

                                                                                     AGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTG          >  SRR4302543.2809816/1‑94 (MQ=60)

                                                                                      GGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGG         <  SRR4302543.924996/94‑1 (MQ=60)

                                                                                      GGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGG         >  SRR4302543.2016635/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        <  SRR4302543.424001/94‑1 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302543.2876773/1‑94 (MQ=60)

                                                                                       GTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGC        >  SRR4302543.4977705/1‑94 (MQ=60)

                                                                                        TATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT       <  SRR4302543.7141664/94‑1 (MQ=60)

                                                                                         ATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG      >  SRR4302543.6842868/1‑94 (MQ=60)

                                                                                         ATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTG      <  SRR4302543.4169201/94‑1 (MQ=60)

                                                                                          TGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGA     <  SRR4302543.6387925/94‑1 (MQ=60)

                                                                                           GCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGAC    <  SRR4302543.7727956/94‑1 (MQ=60)

                                                                                           GCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGAC    <  SRR4302543.7951907/94‑1 (MQ=60)

                                                                                            CGGTTCGACCGGGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACA   >  SRR4302543.1135542/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTCCTTCATCAACcagtcggaaccgggcgagttggacctcgacagaccggtaatcctcgtgagcgcaag  >  SRR4302543.231841/1‑38 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.7839541/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.6856760/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.260255/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  <  SRR4302543.3861540/94‑1 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.6655291/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.4741001/1‑94 (MQ=60)

                                                                                             GGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  SRR4302543.231839/1‑94 (MQ=60)

CTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAA  >  NC_000913/4369090‑4369276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`