Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,368,258 A→G intergenic (‑268/‑8) yjeH ← / → mopB putative transport/GroES

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,368,2580AG99.7% 1184.2 / ‑6.4 373intergenic (‑268/‑8)yjeH/mopBputative transport/GroES
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (197/174);  total (197/176)
Fisher's exact test for biased strand distribution p-value = 4.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 389 total aligned reads displayed.

GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA  >  NC_000913/4368168‑4368347
                                                                                          |                                                                                         
gAAGCCTCATCCCCATTTCTCTTGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGt                                                                                         >  1:1385761/1‑93 (MQ=255)
gAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGt                                                                                         >  1:6793248/1‑93 (MQ=255)
gAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGt                                                                                         >  2:7705511/1‑93 (MQ=255)
  aGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTa                                                                                       >  1:3224095/1‑93 (MQ=255)
  aGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTa                                                                                       <  2:2236177/93‑1 (MQ=255)
     cccATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa                                                                                    <  1:3327891/91‑1 (MQ=255)
     cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa                                                                                    <  2:5010497/93‑1 (MQ=255)
     cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCa                                                                                    <  2:5495364/93‑1 (MQ=255)
      tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa                                                                                   >  1:7450164/1‑93 (MQ=255)
      tCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa                                                                                   <  1:5538746/93‑1 (MQ=255)
      tCATCCCCATTGCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCaa                                                                                   <  2:2404788/93‑1 (MQ=255)
          ccacATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGaa                                                                               <  2:5246775/90‑1 (MQ=255)
            ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAata                                                                             >  1:12923/1‑93 (MQ=255)
              aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt                                                                           <  1:271651/93‑1 (MQ=255)
              aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt                                                                           <  1:3051959/93‑1 (MQ=255)
              aTTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATAtt                                                                           >  1:7791998/1‑93 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          >  1:1151111/1‑93 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          >  2:5626477/1‑93 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          <  2:3490234/93‑1 (MQ=255)
               tttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTc                                                                          >  2:3716839/1‑93 (MQ=255)
                  ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTc                                                                       <  2:3770745/93‑1 (MQ=255)
                   tctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTcc                                                                      <  1:1712554/93‑1 (MQ=255)
                    ctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCa                                                                     <  2:1587630/93‑1 (MQ=255)
                         cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCa                                                                <  1:2425421/93‑1 (MQ=255)
                         cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCa                                                                <  2:1994375/93‑1 (MQ=255)
                         cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCa                                                                <  2:2648761/93‑1 (MQ=255)
                          aCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCCATGAATATTCGTCCATTGCAt                                                               >  2:945718/1‑93 (MQ=255)
                           ccAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATg                                                              <  1:4102021/93‑1 (MQ=255)
                             aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt                                                            >  2:6117688/1‑93 (MQ=255)
                             aGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGAt                                                            <  1:5138080/93‑1 (MQ=255)
                              gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc                                                           <  1:6003228/93‑1 (MQ=255)
                              gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc                                                           >  2:4403573/1‑93 (MQ=255)
                              gCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATc                                                           <  1:4254315/93‑1 (MQ=255)
                                cGGGAAACCACGTAAGCTCCGGCGTCGCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgc                                                         <  1:5188245/93‑1 (MQ=255)
                                 gggAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATcgcg                                                        >  1:4935684/1‑93 (MQ=255)
                                   gAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTg                                                      >  1:5597557/1‑93 (MQ=255)
                                     aaCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAt                                                    >  1:1982331/1‑93 (MQ=255)
                                      aCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATc                                                   <  2:6719722/93‑1 (MQ=255)
                                        cACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGt                                                 >  1:627014/1‑93 (MQ=255)
                                         aCGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTc                                                >  2:1895135/1‑93 (MQ=255)
                                         aCGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTc                                                >  2:7885321/1‑93 (MQ=255)
                                          cGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCa                                               >  1:4599717/1‑93 (MQ=255)
                                           gTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCaa                                              >  2:2332788/1‑93 (MQ=255)
                                           gTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCaa                                              >  1:2570401/1‑93 (MQ=255)
                                            tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg                                             <  1:3615135/93‑1 (MQ=255)
                                            tAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAg                                             >  1:7163127/1‑93 (MQ=255)
                                             aaGCTCCGGCGTCACCTATAACAGTCACGGACTTTCTCAAAGGTGGGTTATCATAGTATATTCGTCTATTGCAGGATCGCGTGATTGTCATGc                                            >  2:7043661/1‑93 (MQ=255)
                                             aaGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGc                                            <  2:6280747/93‑1 (MQ=255)
                                              aGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCg                                           <  2:830514/93‑1 (MQ=255)
                                                cTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTa                                         <  2:6510480/93‑1 (MQ=255)
                                                 tCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaa                                        <  1:7730766/93‑1 (MQ=255)
                                                  ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa                                       <  2:5908574/93‑1 (MQ=255)
                                                  ccGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTaaa                                       <  1:5344566/93‑1 (MQ=255)
                                                   cGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaag                                      <  1:6379295/93‑1 (MQ=255)
                                                   cGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaag                                      >  2:4546590/1‑93 (MQ=255)
                                                    ggCGTCCCCCATAACAGATACGGGCTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaaga                                     <  2:5337941/93‑1 (MQ=255)
                                                     gtgTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCTTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  1:1755431/91‑1 (MQ=255)
                                                     gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  1:1121584/93‑1 (MQ=255)
                                                     gCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAaagaa                                    <  1:3532236/93‑1 (MQ=255)
                                                       gTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGt                                  >  1:3878800/1‑93 (MQ=255)
                                                       gTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGt                                  >  1:2286019/1‑93 (MQ=255)
                                                       gTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGt                                  >  2:3337233/1‑93 (MQ=255)
                                                        tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt                                 >  2:1077853/1‑93 (MQ=255)
                                                        tCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGtt                                 <  1:5811077/93‑1 (MQ=255)
                                                         cACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTg                                >  1:3693975/1‑93 (MQ=255)
                                                          aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa                               >  2:3463803/1‑93 (MQ=255)
                                                          aCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGa                               >  1:672979/1‑93 (MQ=255)
                                                           cccATAACAGATACGGTCTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaa                              <  2:1501157/93‑1 (MQ=255)
                                                            ccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaaa                             >  2:4088175/1‑93 (MQ=255)
                                                            ccATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGaaa                             >  1:7242635/1‑93 (MQ=255)
                                                             cATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAc                            >  1:3174125/1‑93 (MQ=255)
                                                              aTAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAca                           >  1:1451799/1‑92 (MQ=255)
                                                              aTAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACt                           <  1:3451159/93‑1 (MQ=255)
                                                               tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAGGTTGAAACTa                          >  2:6625921/1‑93 (MQ=255)
                                                               tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTa                          >  1:799059/1‑93 (MQ=255)
                                                               tAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTa                          <  2:4840396/93‑1 (MQ=255)
                                                                aaCAGATACGGACTTTCTCAAAGGAGTGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaa                         <  1:4673286/93‑1 (MQ=255)
                                                                aaCAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTaa                         >  1:5948297/1‑93 (MQ=255)
                                                                  cAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAt                       >  2:3871139/1‑93 (MQ=255)
                                                                   aGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATc                      <  2:3631498/93‑1 (MQ=255)
                                                                   aGATACGGACTTTCTCAAAGGAGAGTTAGCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAACCTAAATc                      <  2:6896727/93‑1 (MQ=255)
                                                                    gATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATct                     <  1:965328/93‑1 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   >  2:2706184/1‑93 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   <  2:3957850/93‑1 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   <  1:3938927/93‑1 (MQ=255)
                                                                      tACGGACTTTCTCAAAGGAGGGGTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   >  2:298828/1‑93 (MQ=255)
                                                                      aatggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgc                   >  2:120528/4‑93 (MQ=255)
                                                                        tggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctg                 <  1:120528/92‑1 (MQ=255)
                                                                        cGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctg                 <  1:6118661/93‑1 (MQ=255)
                                                                         ggACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTgg                >  2:7210057/1‑93 (MQ=255)
                                                                          gACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATctgctgtc               >  1:1033630/1‑91 (MQ=255)
                                                                            cTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcgg             >  2:1444067/1‑93 (MQ=255)
                                                                             tttCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTggcggc            >  2:5934905/1‑93 (MQ=255)
                                                                               tctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt          <  1:5715674/93‑1 (MQ=255)
                                                                               tctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt          <  2:2129108/93‑1 (MQ=255)
                                                                               tctcAAAGGAGGGTTATCAATGAATATTCCTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAt          <  2:7465831/93‑1 (MQ=255)
                                                                                ctcAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATc         <  2:7713040/93‑1 (MQ=255)
                                                                                   aaaGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGtt      >  1:5401951/1‑93 (MQ=255)
                                                                                     aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt    >  1:4378628/1‑93 (MQ=255)
                                                                                     aggaggGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCt    >  2:4368554/1‑93 (MQ=255)
                                                                                          |                                                                                         
GAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA  >  NC_000913/4368168‑4368347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  >  NC_000913/4368165‑4368351
                                                                                             |                                                                                             
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG                                                                                               <  SRR4302543.141762/94‑1 (MQ=60)
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG                                                                                               <  SRR4302543.2687940/94‑1 (MQ=60)
GGCGAAGCCTCAACCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGG                                                                                               <  SRR4302543.6299946/94‑1 (MQ=60)
  CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT                                                                                             >  SRR4302543.6857397/1‑94 (MQ=60)
  CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT                                                                                             <  SRR4302543.5477381/94‑1 (MQ=60)
  CGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGT                                                                                             <  SRR4302543.4871643/94‑1 (MQ=60)
    AAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTA                                                                                           >  SRR4302543.3253236/1‑94 (MQ=60)
    AAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCAGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTA                                                                                           >  SRR4302543.3253234/1‑94 (MQ=60)
     AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT                                                                                          >  SRR4302543.1142898/1‑94 (MQ=60)
     AGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTAT                                                                                          >  SRR4302543.6354401/1‑94 (MQ=60)
       CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA                                                                                        >  SRR4302543.7522947/1‑94 (MQ=60)
       CCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCA                                                                                        >  SRR4302543.1375846/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       >  SRR4302543.7521559/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       <  SRR4302543.113164/94‑1 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       >  SRR4302543.3922871/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       >  SRR4302543.4155848/1‑94 (MQ=60)
        CTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       >  SRR4302543.5602672/1‑94 (MQ=60)
        CCCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAA                                                                                       <  SRR4302543.3357906/94‑1 (MQ=60)
         TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT                                                                                      >  SRR4302543.7246154/1‑94 (MQ=60)
         TCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT                                                                                      <  SRR4302543.5589108/94‑1 (MQ=60)
         CCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAAT                                                                                      <  SRR4302543.642301/94‑1 (MQ=60)
          CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG                                                                                     <  SRR4302543.2705812/94‑1 (MQ=60)
          CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG                                                                                     <  SRR4302543.4448651/94‑1 (MQ=60)
          CATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATG                                                                                     >  SRR4302543.1141040/1‑94 (MQ=60)
           ATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGA                                                                                    >  SRR4302543.2691472/1‑94 (MQ=60)
             CCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAAT                                                                                  <  SRR4302543.2051426/94‑1 (MQ=60)
              CCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATA                                                                                 >  SRR4302543.13036/1‑94 (MQ=60)
                CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT                                                                               >  SRR4302543.5088247/1‑94 (MQ=60)
                CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT                                                                               >  SRR4302543.7865436/1‑94 (MQ=60)
                CATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATT                                                                               >  SRR4302543.7739121/1‑94 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302543.2879800/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302543.274038/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302543.6700161/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              >  SRR4302543.1161600/1‑94 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              >  SRR4302543.6818856/1‑94 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              >  SRR4302543.394850/1‑94 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              <  SRR4302543.3079451/94‑1 (MQ=60)
                 ATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTC                                                                              >  SRR4302543.1302947/1‑94 (MQ=60)
                  TTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCG                                                                             <  SRR4302543.3753003/94‑1 (MQ=60)
                   TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT                                                                            <  SRR4302543.3291923/94‑1 (MQ=60)
                   TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT                                                                            >  SRR4302543.6812515/1‑94 (MQ=60)
                   TTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGT                                                                            <  SRR4302543.246475/94‑1 (MQ=60)
                      TCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCA                                                                         <  SRR4302543.1727863/94‑1 (MQ=60)
                       CTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCAT                                                                        >  SRR4302543.518849/1‑94 (MQ=60)
                        TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATT                                                                       <  SRR4302543.5348327/94‑1 (MQ=60)
                         gcgaccgagaCGGGAAACCACGTAAGCTTCGGTGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG                                                                      <  SRR4302543.1417917/84‑1 (MQ=60)
                         GGTCACCAGCCGTGAAACCACGTAAGCGCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG                                                                      <  SRR4302543.1417918/94‑1 (MQ=60)
                         GGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG                                                                      <  SRR4302543.5614278/94‑1 (MQ=60)
                         GGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTG                                                                      <  SRR4302543.1417919/94‑1 (MQ=60)
                          GTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGC                                                                     >  SRR4302543.2822950/1‑94 (MQ=60)
                            CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAT                                                                   <  SRR4302543.2447313/94‑1 (MQ=60)
                            CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCAT                                                                   >  SRR4302543.4541004/1‑94 (MQ=60)
                             CCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302543.6083794/94‑1 (MQ=60)
                             ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  >  SRR4302543.7253315/1‑94 (MQ=60)
                             ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATG                                                                  <  SRR4302543.5830052/94‑1 (MQ=60)
                              CCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGA                                                                 >  SRR4302543.272747/1‑94 (MQ=60)
                              CCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGA                                                                 <  SRR4302543.4138898/94‑1 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               <  SRR4302543.5184527/94‑1 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               >  SRR4302543.5204932/1‑94 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               <  SRR4302543.5184526/94‑1 (MQ=60)
                                AGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATC                                                               <  SRR4302543.7854367/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302543.4292933/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302543.4292932/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302543.1548861/94‑1 (MQ=60)
                                 GCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCG                                                              <  SRR4302543.6058430/94‑1 (MQ=60)
                                  CCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGC                                                             >  SRR4302543.6235294/1‑94 (MQ=60)
                                   CGGGAAACGCCGTAAGCTCCGGCGTCAGCCATAACAGGTACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            <  SRR4302543.3233023/94‑1 (MQ=60)
                                   CGGGAAACCACGTAAGCTCCGGCGTCGCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            <  SRR4302543.5235041/94‑1 (MQ=60)
                                   CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            <  SRR4302543.3233022/94‑1 (MQ=60)
                                   CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            <  SRR4302543.803112/94‑1 (MQ=60)
                                   CGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCG                                                            >  SRR4302543.4980636/1‑94 (MQ=60)
                                     GGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTG                                                          >  SRR4302543.5648553/1‑94 (MQ=60)
                                       AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        >  SRR4302543.837678/1‑94 (MQ=60)
                                       AAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGAT                                                        >  SRR4302543.2000107/1‑94 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302543.613005/94‑1 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       >  SRR4302543.2839749/1‑94 (MQ=60)
                                        AACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302543.4046997/94‑1 (MQ=60)
                                        AACCACGTAAACTTCGGCGTCTCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATC                                                       <  SRR4302543.5335737/94‑1 (MQ=60)
                                         ACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCG                                                      >  SRR4302543.7342487/1‑94 (MQ=60)
                                         ACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCG                                                      >  SRR4302543.33561/1‑94 (MQ=60)
                                         ACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCG                                                      <  SRR4302543.5769446/94‑1 (MQ=60)
                                          CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT                                                     >  SRR4302543.632751/1‑94 (MQ=60)
                                          CCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGT                                                     >  SRR4302543.1748295/1‑94 (MQ=60)
                                           CACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTC                                                    >  SRR4302543.6411825/1‑94 (MQ=60)
                                            ACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCA                                                   <  SRR4302543.3621700/94‑1 (MQ=60)
                                            ACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCA                                                   >  SRR4302543.4641504/1‑94 (MQ=60)
                                             CGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAA                                                  >  SRR4302543.2593851/1‑94 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 <  SRR4302543.2334454/94‑1 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 >  SRR4302543.7313060/1‑94 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 >  SRR4302543.7232715/1‑94 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 <  SRR4302543.6279963/94‑1 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAG                                                 <  SRR4302543.5766714/94‑1 (MQ=60)
                                              GTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGAATGATCGCGTGATCGTCAAG                                                 >  SRR4302543.5728937/1‑94 (MQ=60)
                                               TAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                <  SRR4302543.3647009/94‑1 (MQ=60)
                                               TAAGCTCCGGCGCCACCCATAACAGATACGTCCTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGC                                                <  SRR4302543.3647008/94‑1 (MQ=60)
                                                AAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCG                                               <  SRR4302543.7962868/94‑1 (MQ=60)
                                                 AGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGT                                              >  SRR4302543.2376531/1‑94 (MQ=60)
                                                 AGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGT                                              >  SRR4302543.6015044/1‑94 (MQ=60)
                                                  GCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTA                                             >  SRR4302543.4060764/1‑94 (MQ=60)
                                                  GCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTA                                             >  SRR4302543.4060766/1‑94 (MQ=60)
                                                   CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA                                            >  SRR4302543.3511739/1‑94 (MQ=60)
                                                   CTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAA                                            >  SRR4302543.1378227/1‑94 (MQ=60)
                                                    TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAA                                           >  SRR4302543.1426683/1‑94 (MQ=60)
                                                    TCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAA                                           <  SRR4302543.7803829/94‑1 (MQ=60)
                                                     CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG                                          <  SRR4302543.4385902/94‑1 (MQ=60)
                                                     CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG                                          <  SRR4302543.5392925/94‑1 (MQ=60)
                                                     CCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAG                                          <  SRR4302543.5392924/94‑1 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         >  SRR4302543.186283/1‑94 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         >  SRR4302543.665565/1‑94 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         <  SRR4302543.1648297/94‑1 (MQ=60)
                                                      CGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGA                                         <  SRR4302543.6439319/94‑1 (MQ=60)
                                                       GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA                                        >  SRR4302543.593945/1‑94 (MQ=60)
                                                       GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA                                        <  SRR4302543.3842924/94‑1 (MQ=60)
                                                       GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA                                        <  SRR4302543.119295/94‑1 (MQ=60)
                                                       GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA                                        >  SRR4302543.1178563/1‑94 (MQ=60)
                                                       GGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAA                                        >  SRR4302543.3640275/1‑94 (MQ=60)
                                                        GTGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCTTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302543.1771111/94‑1 (MQ=60)
                                                        GCGTCCCCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302543.1771110/94‑1 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302543.1110841/94‑1 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302543.1131754/94‑1 (MQ=60)
                                                        GCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAG                                       <  SRR4302543.3563682/94‑1 (MQ=60)
                                                         CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT                                      >  SRR4302543.2306896/1‑94 (MQ=60)
                                                         CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT                                      >  SRR4302543.3913044/1‑94 (MQ=60)
                                                         CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT                                      >  SRR4302543.7695666/1‑94 (MQ=60)
                                                         CGTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGT                                      <  SRR4302543.7844288/94‑1 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCTCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302543.6282674/1‑94 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     <  SRR4302543.696159/94‑1 (MQ=60)
                                                          GTCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTT                                     >  SRR4302543.5551987/1‑94 (MQ=60)
                                                           TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    >  SRR4302543.3726450/1‑94 (MQ=60)
                                                           TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    <  SRR4302543.5863926/94‑1 (MQ=60)
                                                           TCACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    <  SRR4302543.4280888/94‑1 (MQ=60)
                                                           GCACCCATAACAGATACGGACTTTCTAAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTG                                    <  SRR4302543.5431821/94‑1 (MQ=60)
                                                            CACCCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGA                                   >  SRR4302543.679174/1‑94 (MQ=60)
                                                            CACCCATAACAGATACGGACTTTCTCAAAGGAGGGCTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGA                                   >  SRR4302543.1397706/1‑94 (MQ=60)
                                                               CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC                                >  SRR4302543.5497997/1‑94 (MQ=60)
                                                               CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC                                >  SRR4302543.6501422/1‑94 (MQ=60)
                                                               CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC                                >  SRR4302543.3202723/1‑94 (MQ=60)
                                                               CCATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAAC                                <  SRR4302543.849974/94‑1 (MQ=60)
                                                                CATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACA                               >  SRR4302543.1464910/1‑94 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              >  SRR4302543.806084/1‑94 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              <  SRR4302543.3482065/94‑1 (MQ=60)
                                                                 ATAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTA                              >  SRR4302543.1150137/1‑94 (MQ=60)
                                                                  TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA                             >  SRR4302543.336525/1‑94 (MQ=60)
                                                                  TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA                             <  SRR4302543.1167156/94‑1 (MQ=60)
                                                                  TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA                             <  SRR4302543.6039197/94‑1 (MQ=60)
                                                                  TAACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAA                             >  SRR4302543.6002735/1‑94 (MQ=60)
                                                                   AACAGATACGGACTTTCTCAAAGGAGTGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA                            <  SRR4302543.4715889/94‑1 (MQ=60)
                                                                   AACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAA                            <  SRR4302543.841566/94‑1 (MQ=60)
                                                                    ACAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAAT                           <  SRR4302543.3924265/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          <  SRR4302543.6009702/94‑1 (MQ=60)
                                                                     CAGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATC                          >  SRR4302543.1220939/1‑94 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         <  SRR4302543.4808708/94‑1 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         >  SRR4302543.6898554/1‑94 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         >  SRR4302543.3086551/1‑94 (MQ=60)
                                                                      AGATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCT                         >  SRR4302543.2425304/1‑94 (MQ=60)
                                                                       GATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTG                        <  SRR4302543.3347578/94‑1 (MQ=60)
                                                                        ATACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGC                       >  SRR4302543.2512839/1‑94 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      <  SRR4302543.1810849/94‑1 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      <  SRR4302543.3973747/94‑1 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      <  SRR4302543.1757288/94‑1 (MQ=60)
                                                                         TACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCT                      <  SRR4302543.4291128/94‑1 (MQ=60)
                                                                          ACGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTG                     >  SRR4302543.6817081/1‑94 (MQ=60)
                                                                           TGGACTTGCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG                    <  SRR4302543.121616/94‑1 (MQ=60)
                                                                           CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG                    <  SRR4302543.4678011/94‑1 (MQ=60)
                                                                           CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG                    <  SRR4302543.562937/94‑1 (MQ=60)
                                                                           CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG                    <  SRR4302543.5096473/94‑1 (MQ=60)
                                                                           CGGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGG                    <  SRR4302543.6176616/94‑1 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAATCTAAATCTGCTGGC                   <  SRR4302543.4688486/94‑1 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGTC                   >  SRR4302543.1042808/1‑94 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   >  SRR4302543.3416573/1‑94 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   <  SRR4302543.1285021/94‑1 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   >  SRR4302543.3724625/1‑94 (MQ=60)
                                                                            GGACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGC                   >  SRR4302543.3724627/1‑94 (MQ=60)
                                                                             GACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCG                  <  SRR4302543.4468008/94‑1 (MQ=60)
                                                                              ACTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGG                 >  SRR4302543.5881062/1‑94 (MQ=60)
                                                                               CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC                >  SRR4302543.4839332/1‑94 (MQ=60)
                                                                               CTTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGC                >  SRR4302543.6129364/1‑94 (MQ=60)
                                                                                TTTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTCAATCTGGTGGCGGCA               >  SRR4302543.2500793/1‑94 (MQ=60)
                                                                                 TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT              <  SRR4302543.3106125/94‑1 (MQ=60)
                                                                                 TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT              >  SRR4302543.7514640/1‑94 (MQ=60)
                                                                                 TTCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCAT              <  SRR4302543.48239/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302543.1958402/94‑1 (MQ=60)
                                                                                  TCTCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATC             <  SRR4302543.5767824/94‑1 (MQ=60)
                                                                                    TCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGT           >  SRR4302543.6867661/1‑94 (MQ=60)
                                                                                    TCAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGT           >  SRR4302543.5550099/1‑94 (MQ=60)
                                                                                     CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTT          >  SRR4302543.5451066/1‑94 (MQ=60)
                                                                                     CAAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGAGGCATCGTT          >  SRR4302543.5451065/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         >  SRR4302543.5292119/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         <  SRR4302543.3749524/94‑1 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         >  SRR4302543.5911262/1‑94 (MQ=60)
                                                                                      AAAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTC         >  SRR4302543.3454600/1‑94 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT        >  SRR4302543.4418308/1‑94 (MQ=60)
                                                                                       AAGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCT        <  SRR4302543.1539536/94‑1 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       <  SRR4302543.7813957/94‑1 (MQ=60)
                                                                                        AGGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTG       >  SRR4302543.7924458/1‑94 (MQ=60)
                                                                                         GGAGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGA      >  SRR4302543.3499805/1‑94 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGCAACTAAATCTGCTGGCGGCATCGTTGTGACG    >  SRR4302543.931221/1‑94 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    <  SRR4302543.1220695/94‑1 (MQ=60)
                                                                                           AGGGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACC    >  SRR4302543.485754/1‑94 (MQ=60)
                                                                                             GGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  <  SRR4302543.2122488/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGG  >  NC_000913/4368165‑4368351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑