Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,408,560 |
G→A |
A144T (GCC→ACC) |
yjfJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,408,560 | 0 | G | A | 99.0%
| 705.8
/ NA
| 203 | A144T (GCC→ACC) | yjfJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (101/100); minor base C (0/2); total (101/102) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 207 total aligned reads displayed.
CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA > NC_000913/4408470‑4408649
|
ggAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAc > 2:286027/1‑93 (MQ=255)
gAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACt < 1:290113/93‑1 (MQ=255)
aaGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTg < 2:2491412/93‑1 (MQ=255)
aGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGa < 2:2611578/93‑1 (MQ=255)
aGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGa > 2:3885763/1‑93 (MQ=255)
tctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAg < 2:267240/93‑1 (MQ=255)
tctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAg > 2:3251640/1‑93 (MQ=255)
tctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAg > 1:907018/1‑93 (MQ=255)
ctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGc < 1:326640/93‑1 (MQ=255)
ccGTGATGGGGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt < 1:1868616/93‑1 (MQ=255)
ccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt > 1:2216642/1‑93 (MQ=255)
cGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCTATg > 1:3113812/1‑93 (MQ=255)
gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc < 1:1078853/93‑1 (MQ=255)
tGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCa < 1:848255/93‑1 (MQ=255)
gATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAg < 1:4610185/93‑1 (MQ=255)
aTGGCGTGGAATAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGc > 2:3798477/1‑93 (MQ=255)
tGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCg > 1:2552742/1‑93 (MQ=255)
tGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCg > 1:777105/1‑93 (MQ=255)
ggCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGt < 1:1362233/93‑1 (MQ=255)
gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca > 1:2952765/1‑93 (MQ=255)
ggAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcaca > 1:4388457/1‑93 (MQ=255)
aaaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaac > 1:3910216/1‑93 (MQ=255)
aaaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaac > 1:2829924/1‑93 (MQ=255)
aaaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaac > 2:3609798/1‑93 (MQ=255)
aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca > 2:2947423/1‑93 (MQ=255)
aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca > 1:3354920/1‑93 (MQ=255)
aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca < 2:4471622/93‑1 (MQ=255)
aaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAgg > 2:2173606/1‑93 (MQ=255)
aGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGc < 1:1585771/93‑1 (MQ=255)
gCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCt < 1:1424219/93‑1 (MQ=255)
gCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCt > 2:3170370/1‑93 (MQ=255)
cAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTg < 1:3527478/93‑1 (MQ=255)
cAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTg < 2:2730114/93‑1 (MQ=255)
gTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTa > 2:238629/1‑93 (MQ=255)
ttACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTac > 2:3993467/1‑92 (MQ=255)
ttACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaa > 1:3027643/1‑93 (MQ=255)
tACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaac < 2:2213153/93‑1 (MQ=255)
acagcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaaca > 1:1004381/1‑93 (MQ=255)
gcgacggcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAACCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAcc < 2:4188941/93‑1 (MQ=255)
gcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAcc > 2:1954546/1‑93 (MQ=255)
gacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctc < 1:3768543/93‑1 (MQ=255)
acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct < 1:3715785/93‑1 (MQ=255)
acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct > 1:458422/1‑93 (MQ=255)
acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct > 2:637762/1‑93 (MQ=255)
cagcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTa < 1:581424/93‑1 (MQ=255)
cagcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTa < 1:2022998/93‑1 (MQ=255)
agcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAc < 1:2179748/93‑1 (MQ=255)
gcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAcc > 2:486903/1‑93 (MQ=255)
gcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGt < 2:2053974/93‑1 (MQ=255)
cagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGtt < 2:4494593/93‑1 (MQ=255)
agcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTg < 2:158497/93‑1 (MQ=255)
agcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTg < 2:609133/93‑1 (MQ=255)
gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg > 2:3515577/1‑93 (MQ=255)
gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg > 1:2433532/1‑93 (MQ=255)
gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg < 2:3018709/93‑1 (MQ=255)
gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg > 2:565257/1‑93 (MQ=255)
cgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgc < 1:4090897/93‑1 (MQ=255)
cgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgc > 1:1655727/1‑93 (MQ=255)
gTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgcg > 1:98440/1‑93 (MQ=255)
gTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgcg > 2:6864/1‑93 (MQ=255)
aTCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCa > 2:2931514/1‑93 (MQ=255)
aTCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGCTGGCGCa > 2:4349402/1‑93 (MQ=255)
gCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCt < 2:4270354/93‑1 (MQ=255)
cTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCtt > 1:4627340/1‑93 (MQ=255)
tCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTc < 2:4648290/93‑1 (MQ=255)
tCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTc > 1:2366032/1‑93 (MQ=255)
cAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTcc > 2:707106/1‑93 (MQ=255)
cAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTcc > 1:4121461/1‑93 (MQ=255)
aGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCa < 2:1248098/93‑1 (MQ=255)
aGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCa < 2:112983/93‑1 (MQ=255)
gTTTGAGCAGCAAATGGAAGTCGTTAAACCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTACCAACCTCTACCGTTGGCGCATCTTCCAg < 2:2142460/93‑1 (MQ=255)
gTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAg > 2:1773953/1‑93 (MQ=255)
tttGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGc < 2:4276396/93‑1 (MQ=255)
tttGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGc < 2:278228/93‑1 (MQ=255)
tttGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGc > 1:2265112/1‑93 (MQ=255)
gAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGtt < 1:2132680/93‑1 (MQ=255)
agcagcAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGttt < 2:1832221/93‑1 (MQ=255)
agcagcAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGttt < 2:4385357/93‑1 (MQ=255)
gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc < 2:1510668/93‑1 (MQ=255)
gcagcaAATGGAAGTCGTCAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCAAGCGTTTc < 2:4573242/93‑1 (MQ=255)
cagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCCTCTTCCAGCGTTTCg > 2:1294504/1‑93 (MQ=255)
gcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAc < 2:1173028/93‑1 (MQ=255)
caAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACa > 1:145407/1‑93 (MQ=255)
caAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACa < 1:1125774/93‑1 (MQ=255)
caAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACa > 2:4048336/1‑93 (MQ=255)
aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg > 1:533295/1‑93 (MQ=255)
aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg > 2:1326466/1‑93 (MQ=255)
aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg < 2:2830139/93‑1 (MQ=255)
aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc < 1:1959371/93‑1 (MQ=255)
aTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCg < 1:2088121/93‑1 (MQ=255)
tGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCgg > 1:25707/1‑93 (MQ=255)
ggAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGc > 2:4155316/1‑93 (MQ=255)
ggAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGc > 1:688584/1‑93 (MQ=255)
ggAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGc > 2:139485/1‑93 (MQ=255)
aaGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAg < 1:2733360/93‑1 (MQ=255)
aGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGa > 1:2721377/1‑93 (MQ=255)
gTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGaa > 1:4148018/1‑93 (MQ=255)
ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCt > 1:1754075/1‑93 (MQ=255)
ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCt < 1:1249126/93‑1 (MQ=255)
ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCCTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCt > 1:3560326/1‑93 (MQ=255)
|
CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA > NC_000913/4408470‑4408649
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC > NC_000913/4408469‑4408653
|
TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACC < SRR4302535.3376477/94‑1 (MQ=60)
CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA < SRR4302535.1591946/94‑1 (MQ=60)
GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT > SRR4302535.2167991/1‑94 (MQ=60)
GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT < SRR4302535.211106/94‑1 (MQ=60)
GAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTG < SRR4302535.2341277/94‑1 (MQ=60)
GAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTG < SRR4302535.292146/94‑1 (MQ=60)
AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA < SRR4302535.3555338/94‑1 (MQ=60)
AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA < SRR4302535.2607946/94‑1 (MQ=60)
GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG > SRR4302535.913458/1‑94 (MQ=60)
TCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGC > SRR4302535.1253658/1‑94 (MQ=60)
CTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCC < SRR4302535.328905/94‑1 (MQ=60)
CCCGTGATGGCGTGTAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT < SRR4302535.1874628/94‑1 (MQ=60)
CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT > SRR4302535.2232423/1‑94 (MQ=60)
CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT < SRR4302535.1097044/94‑1 (MQ=60)
CCGTGATGGGGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG < SRR4302535.1882087/94‑1 (MQ=60)
CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCTATG > SRR4302535.3135487/1‑94 (MQ=60)
CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG > SRR4302535.1375618/1‑94 (MQ=60)
CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC > SRR4302535.4634378/1‑94 (MQ=60)
GTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCA < SRR4302535.3400726/94‑1 (MQ=60)
GTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCA < SRR4302535.1086530/94‑1 (MQ=60)
TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG < SRR4302535.854223/94‑1 (MQ=60)
GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC < SRR4302535.4544930/94‑1 (MQ=60)
GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC < SRR4302535.4641508/94‑1 (MQ=60)
ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG > SRR4302535.2571122/1‑94 (MQ=60)
ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG > SRR4302535.782564/1‑94 (MQ=60)
GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG < SRR4302535.1615740/94‑1 (MQ=60)
GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG < SRR4302535.1371976/94‑1 (MQ=60)
CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA > SRR4302535.2973508/1‑94 (MQ=60)
GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC < SRR4302535.239320/94‑1 (MQ=60)
GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC < SRR4302535.808743/94‑1 (MQ=60)
TGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACA > SRR4302535.4418477/1‑94 (MQ=60)
GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC < SRR4302535.2459596/94‑1 (MQ=60)
GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC > SRR4302535.3936992/1‑94 (MQ=60)
GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC > SRR4302535.2850010/1‑94 (MQ=60)
AAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACA > SRR4302535.3378281/1‑94 (MQ=60)
AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG < SRR4302535.4245247/94‑1 (MQ=60)
AAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGC > SRR4302535.4141215/1‑94 (MQ=60)
AGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCT < SRR4302535.4032133/94‑1 (MQ=60)
AGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCT < SRR4302535.1597212/94‑1 (MQ=60)
GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG < SRR4302535.1434390/94‑1 (MQ=60)
GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG < SRR4302535.918171/94‑1 (MQ=60)
CAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGT < SRR4302535.3551975/94‑1 (MQ=60)
AGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTA > SRR4302535.2795356/1‑94 (MQ=60)
GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA > SRR4302535.3048838/1‑94 (MQ=60)
TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA > SRR4302535.1011512/1‑94 (MQ=60)
CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC < SRR4302535.2218543/94‑1 (MQ=60)
GCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCT < SRR4302535.2071104/94‑1 (MQ=60)
GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT < SRR4302535.3794557/94‑1 (MQ=60)
GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT > SRR4302535.461630/1‑94 (MQ=60)
ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA < SRR4302535.3741528/94‑1 (MQ=60)
ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA > SRR4302535.4648024/1‑94 (MQ=60)
CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC < SRR4302535.2037579/94‑1 (MQ=60)
CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC < SRR4302535.585507/94‑1 (MQ=60)
CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGAAGCGTGCACAACAGGCTGTAACAACCTCTAC > SRR4302535.274706/1‑94 (MQ=60)
AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC < SRR4302535.2195308/94‑1 (MQ=60)
GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG < SRR4302535.68117/94‑1 (MQ=60)
CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG > SRR4302535.3057926/1‑94 (MQ=60)
CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGCGCACAACAGGCTGTAACAACCTCTACCGTTG < SRR4302535.3279239/94‑1 (MQ=60)
AGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGG > SRR4302535.2451064/1‑94 (MQ=60)
GCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGC > SRR4302535.1667704/1‑94 (MQ=60)
GCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGC < SRR4302535.3305038/94‑1 (MQ=60)
CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG < SRR4302535.4118889/94‑1 (MQ=60)
CGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCG > SRR4302535.99136/1‑94 (MQ=60)
GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC > SRR4302535.577356/1‑94 (MQ=60)
GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC > SRR4302535.500741/1‑94 (MQ=60)
GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC > SRR4302535.1056831/1‑94 (MQ=60)
TATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCA > SRR4302535.2242331/1‑94 (MQ=60)
GCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTT > SRR4302535.4658752/1‑94 (MQ=60)
CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC > SRR4302535.2383018/1‑94 (MQ=60)
TCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCC > SRR4302535.4149664/1‑94 (MQ=60)
AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG < SRR4302535.1454162/94‑1 (MQ=60)
AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG > SRR4302535.3644601/1‑94 (MQ=60)
GTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACANCAGGCTGTAACAACCTNTACCGTTGGCGCANCNTNCNGC > SRR4302535.829889/1‑94 (MQ=60)
GTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGC > SRR4302535.2281253/1‑94 (MQ=60)
GTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGC < SRR4302535.493242/94‑1 (MQ=60)
TGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTT < SRR4302535.722321/94‑1 (MQ=60)
TGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTT < SRR4302535.1954296/94‑1 (MQ=60)
GAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTT < SRR4302535.2148053/94‑1 (MQ=60)
AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC > SRR4302535.3201436/1‑94 (MQ=60)
GCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCG > SRR4302535.383548/1‑94 (MQ=60)
CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA > SRR4302535.2009121/1‑94 (MQ=60)
CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA > SRR4302535.4169514/1‑94 (MQ=60)
GCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACA > SRR4302535.146421/1‑94 (MQ=60)
CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG > SRR4302535.537028/1‑94 (MQ=60)
CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG < SRR4302535.1133810/94‑1 (MQ=60)
CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG > SRR4302535.258386/1‑94 (MQ=60)
AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC > SRR4302535.2935829/1‑94 (MQ=60)
AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG < SRR4302535.1973502/94‑1 (MQ=60)
ATGTAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACACCCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG < SRR4302535.1684308/94‑1 (MQ=60)
ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG < SRR4302535.2103167/94‑1 (MQ=60)
ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG > SRR4302535.25907/1‑94 (MQ=60)
TGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGC > SRR4302535.3028791/1‑94 (MQ=60)
TGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGC > SRR4302535.693407/1‑94 (MQ=60)
AAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGA > SRR4302535.2740816/1‑94 (MQ=60)
AAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGA < SRR4302535.2752867/94‑1 (MQ=60)
AGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAA > SRR4302535.4176419/1‑94 (MQ=60)
AGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAA > SRR4302535.1348907/1‑94 (MQ=60)
GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT > SRR4302535.1766751/1‑94 (MQ=60)
GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT > SRR4302535.2908499/1‑94 (MQ=60)
GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCCTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT > SRR4302535.3585013/1‑94 (MQ=60)
TTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTT < SRR4302535.2151639/94‑1 (MQ=60)
TTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTT < SRR4302535.1258042/94‑1 (MQ=60)
TAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA > SRR4302535.3746664/1‑94 (MQ=60)
AAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAGCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAA > SRR4302535.2531103/1‑94 (MQ=60)
AAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAA < SRR4302535.869705/94‑1 (MQ=60)
AAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA > SRR4302535.3960943/1‑94 (MQ=60)
AACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA > SRR4302535.3417479/1‑94 (MQ=60)
AACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAA < SRR4302535.4486587/94‑1 (MQ=60)
ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC < SRR4302535.1382162/94‑1 (MQ=60)
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TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC > NC_000913/4408469‑4408653
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
