Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,408,560	G→A	A144T (GCC→ACC)	yjfJ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,408,560	0	G	A	99.7%	1253.8 / ‑5.9	361	A144T (GCC→ACC)	yjfJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (183/176); total (183/178)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.58e-01

Only 100 of 368 total aligned reads displayed.

CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA  >  NC_000913/4408470‑4408649

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACGGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        <  1:970554/93‑1 (MQ=255)

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        >  1:5173587/1‑93 (MQ=255)

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        <  2:6019047/93‑1 (MQ=255)

 tGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCa                                                                                        <  1:3857695/93‑1 (MQ=255)

  ggAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAc                                                                                       >  2:7501176/1‑93 (MQ=255)

  ggAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAc                                                                                       <  1:4851032/93‑1 (MQ=255)

  ggAAGGCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAc                                                                                       <  2:6850669/93‑1 (MQ=255)

   gAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACt                                                                                      <  2:3956480/93‑1 (MQ=255)

       tctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAg                                                                                  >  1:3895946/1‑93 (MQ=255)

        ctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGc                                                                                 <  1:7386950/93‑1 (MQ=255)

        ctcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGc                                                                                 <  2:1391894/93‑1 (MQ=255)

         tcCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGcc                                                                                <  1:4487754/93‑1 (MQ=255)

           ccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt                                                                              <  1:6309655/93‑1 (MQ=255)

           ccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt                                                                              <  2:4968677/93‑1 (MQ=255)

           ccGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAt                                                                              >  1:6429597/1‑93 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            >  2:6317886/1‑93 (MQ=255)

             gTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGc                                                                            >  1:5760182/1‑93 (MQ=255)

               gATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAg                                                                          >  2:5668176/1‑93 (MQ=255)

                aTGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGc                                                                         <  2:7426604/93‑1 (MQ=255)

                aTGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGc                                                                         <  2:1560/93‑1 (MQ=255)

                  ggCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGt                                                                       <  1:7065249/93‑1 (MQ=255)

                  ggCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGt                                                                       <  2:1158887/93‑1 (MQ=255)

                    cGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGc                                                                     >  2:351474/1‑93 (MQ=255)

                    cGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGc                                                                     >  2:1021724/1‑93 (MQ=255)

                     gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca                                                                    <  2:7621113/93‑1 (MQ=255)

                     gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca                                                                    <  2:5201080/93‑1 (MQ=255)

                     gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca                                                                    >  1:2107996/1‑93 (MQ=255)

                     gTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGca                                                                    >  1:5996244/1‑93 (MQ=255)

                      tGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGcac                                                                   >  2:2154525/1‑93 (MQ=255)

                        gAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaa                                                                 <  1:637564/93‑1 (MQ=255)

                         aaaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCCCTGAAGCCATGCAGCGTGCacaac                                                                <  2:3175051/93‑1 (MQ=255)

                          aaaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCacaaca                                                               >  2:7699158/1‑93 (MQ=255)

                           aaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAg                                                              >  2:4837872/1‑93 (MQ=255)

                           aaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAg                                                              >  2:6448044/1‑93 (MQ=255)

                           aaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAg                                                              >  2:3332116/1‑93 (MQ=255)

                           aaaGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAg                                                              <  1:3585519/93‑1 (MQ=255)

                              gCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCt                                                           <  2:3646806/93‑1 (MQ=255)

                              gCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCt                                                           >  1:6859759/1‑93 (MQ=255)

                               cAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTg                                                          >  1:4165850/1‑93 (MQ=255)

                               cAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGAACAACAGGCTg                                                          >  1:2544977/1‑93 (MQ=255)

                                 gTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTa                                                        <  1:6600150/93‑1 (MQ=255)

                                  ttACAGCGACAGCGCAGCGGATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaa                                                       >  2:810973/1‑93 (MQ=255)

                                   tACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaac                                                      <  2:2758/93‑1 (MQ=255)

                                     cagcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaa                                                    <  1:7022154/93‑1 (MQ=255)

                                      agcgacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTaacaac                                                   >  1:1020244/1‑93 (MQ=255)

                                         gacagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctc                                                <  1:2021276/93‑1 (MQ=255)

                                          acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct                                               <  1:1352646/93‑1 (MQ=255)

                                          acagcgCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACctct                                               >  1:2934071/1‑93 (MQ=255)

                                           cagcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTa                                              <  2:2585202/93‑1 (MQ=255)

                                           cagcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTa                                              <  1:3623710/93‑1 (MQ=255)

                                            agcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAc                                             >  2:2046126/1‑93 (MQ=255)

                                            agcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAc                                             <  2:5481188/93‑1 (MQ=255)

                                             gcgcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAcc                                            >  2:109860/1‑93 (MQ=255)

                                               gcagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGt                                          <  2:7227850/93‑1 (MQ=255)

                                                cagcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACCGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGtt                                         <  2:5359916/93‑1 (MQ=255)

                                                 agcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTg                                        <  1:511647/93‑1 (MQ=255)

                                                  gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg                                       >  2:3374013/1‑93 (MQ=255)

                                                  gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg                                       <  1:4982431/93‑1 (MQ=255)

                                                  gcgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTgg                                       <  2:6197128/93‑1 (MQ=255)

                                                   cgTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgc                                      <  2:7929628/93‑1 (MQ=255)

                                                    gTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgcg                                     >  2:6787740/1‑93 (MQ=255)

                                                    gTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGgcg                                     >  2:5947991/1‑93 (MQ=255)

                                                      aTCTCTCAGTTTGAGCAGCAAATGGAAGTCGCTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCa                                   <  1:7819086/93‑1 (MQ=255)

                                                         gCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCt                                <  1:5914434/93‑1 (MQ=255)

                                                           tCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTc                              <  2:3834804/93‑1 (MQ=255)

                                                           tCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTc                              <  1:3023294/93‑1 (MQ=255)

                                                             aGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCa                            <  2:1301062/93‑1 (MQ=255)

                                                              gTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAg                           >  1:7512154/1‑93 (MQ=255)

                                                               tttGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGc                          <  1:4372382/93‑1 (MQ=255)

                                                                ttGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCCTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCg                         <  1:5466126/93‑1 (MQ=255)

                                                                  gAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGtt                       <  2:5884722/93‑1 (MQ=255)

                                                                   agcagcAAATGAAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGttt                      <  2:2987710/93‑1 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAATCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     <  2:4276748/93‑1 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     <  1:1043331/93‑1 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     >  1:6211084/1‑93 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     >  2:4604022/1‑93 (MQ=255)

                                                                    gcagcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTc                     <  1:5572050/93‑1 (MQ=255)

                                                                      agcaAATGGAAGTCGTTAAAACCACTGAAGCCATGGAGCGTGCACAACAGGATGTCACAACGTCTACCGTTGGCGCCTCTTCAAGCGTTTCGa                   >  1:4130191/1‑93 (MQ=255)

                                                                      agcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGa                   >  1:4742558/1‑93 (MQ=255)

                                                                      agcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGa                   >  2:3075166/1‑93 (MQ=255)

                                                                      agcaAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGa                   <  1:6105818/93‑1 (MQ=255)

                                                                       gcaAATGGAAGTCGTTAAAACTACTGAAGCCATGCAGCGTGCACAACGGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAc                  >  1:354521/1‑93 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                <  1:1226122/93‑1 (MQ=255)

                                                                         aaaTGGAAGTCGTTAAAACCACAGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAg                >  2:6947925/1‑93 (MQ=255)

                                                                          aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc               <  1:3414739/93‑1 (MQ=255)

                                                                          aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc               <  1:3155543/93‑1 (MQ=255)

                                                                          aaTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGc               >  1:5058969/1‑93 (MQ=255)

                                                                           aTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCg              <  1:7243095/93‑1 (MQ=255)

                                                                           aTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCg              <  1:5252878/93‑1 (MQ=255)

                                                                           aTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCg              >  2:6080683/1‑93 (MQ=255)

                                                                           aTGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCg              <  2:4453764/93‑1 (MQ=255)

                                                                              gAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCa           <  1:2737466/93‑1 (MQ=255)

                                                                               aaGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAg          >  1:2773649/1‑93 (MQ=255)

                                                                                 gTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTAGCGCATCTTCCAGCGTTTCGACAGCGGCAGaa        >  2:6264914/1‑93 (MQ=255)

                                                                                  tCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAt       <  1:1897742/93‑1 (MQ=255)

                                                                                  tCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAt       <  1:7721913/93‑1 (MQ=255)

                                                                                    gTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATcc     <  1:1493275/93‑1 (MQ=255)

                                                                                     ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCt    >  2:2254645/1‑93 (MQ=255)

                                                                                     ttAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCt    >  2:1755841/1‑93 (MQ=255)

                                                                                       aaaaCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTa  <  2:2532092/93‑1 (MQ=255)

CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA  >  NC_000913/4408470‑4408649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  >  NC_000913/4408467‑4408653

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAA                                                                                               <  SRR4302543.3925287/94‑1 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              >  SRR4302543.3106958/1‑94 (MQ=60)

 ATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAAC                                                                                              <  SRR4302543.5891099/94‑1 (MQ=60)

  TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACC                                                                                             <  SRR4302543.7281162/94‑1 (MQ=60)

  TCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACC                                                                                             <  SRR4302543.5700650/94‑1 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA                                                                                            >  SRR4302543.391128/1‑94 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA                                                                                            >  SRR4302543.4921256/1‑94 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA                                                                                            >  SRR4302543.5220305/1‑94 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA                                                                                            <  SRR4302543.1232872/94‑1 (MQ=60)

   CTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCA                                                                                            >  SRR4302543.5220306/1‑94 (MQ=60)

    TGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACGGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAC                                                                                           <  SRR4302543.979091/94‑1 (MQ=60)

    TGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCCAATGGAAGTCGTTAAAACCAC                                                                                           >  SRR4302543.3184699/1‑94 (MQ=60)

    TGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCAC                                                                                           <  SRR4302543.3891776/94‑1 (MQ=60)

     GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT                                                                                          <  SRR4302543.6221193/94‑1 (MQ=60)

     GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT                                                                                          <  SRR4302543.3070844/94‑1 (MQ=60)

     GGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACT                                                                                          <  SRR4302543.4895270/94‑1 (MQ=60)

      GAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTG                                                                                         >  SRR4302543.2877664/1‑94 (MQ=60)

        AGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAA                                                                                       >  SRR4302543.6393239/1‑94 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAG                                                                                      >  SRR4302543.4772947/1‑94 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      >  SRR4302543.3930350/1‑94 (MQ=60)

         GTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAG                                                                                      <  SRR4302543.1958153/94‑1 (MQ=60)

          TCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGC                                                                                     >  SRR4302543.3197888/1‑94 (MQ=60)

           CTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCC                                                                                    <  SRR4302543.7457929/94‑1 (MQ=60)

           CTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCC                                                                                    <  SRR4302543.1964634/94‑1 (MQ=60)

            TCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCGA                                                                                   >  SRR4302543.5146316/1‑94 (MQ=60)

            TCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCA                                                                                   <  SRR4302543.4528518/94‑1 (MQ=60)

             CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT                                                                                  <  SRR4302543.7021336/94‑1 (MQ=60)

             CCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCAT                                                                                  >  SRR4302543.6490181/1‑94 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCACATGGCAGTCGTTAAAACCACTGAAGCCATG                                                                                 >  SRR4302543.4191809/1‑94 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG                                                                                 <  SRR4302543.6368994/94‑1 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG                                                                                 >  SRR4302543.4191810/1‑94 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG                                                                                 >  SRR4302543.2832047/1‑94 (MQ=60)

              CCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATG                                                                                 <  SRR4302543.6459410/94‑1 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGGCAGCTCAGCGGATCGCGCAGTTCGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                <  SRR4302543.4177408/94‑1 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                >  SRR4302543.2967998/1‑94 (MQ=60)

               CGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGC                                                                                >  SRR4302543.5812659/1‑94 (MQ=60)

                GTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCA                                                                               <  SRR4302543.3073432/94‑1 (MQ=60)

                GTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCA                                                                               >  SRR4302543.2793339/1‑94 (MQ=60)

                 TGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAG                                                                              <  SRR4302543.3542143/94‑1 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302543.3963320/1‑94 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302543.1073632/1‑94 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302543.5411938/1‑94 (MQ=60)

                  GATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGC                                                                             >  SRR4302543.3963319/1‑94 (MQ=60)

                   ATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCG                                                                            <  SRR4302543.6001168/94‑1 (MQ=60)

                    TGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGG                                                                           >  SRR4302543.3645982/1‑94 (MQ=60)

                     GGTGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGGATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          <  SRR4302543.7133845/94‑1 (MQ=60)

                     GGCGTGGAAAAAGCGGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          <  SRR4302543.7133847/94‑1 (MQ=60)

                     GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          <  SRR4302543.4942502/94‑1 (MQ=60)

                     GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          >  SRR4302543.4607208/1‑94 (MQ=60)

                     GGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTG                                                                          <  SRR4302543.7133846/94‑1 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302543.5124820/1‑94 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302543.4509124/1‑94 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302543.6051221/1‑94 (MQ=60)

                       CGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCA                                                                        >  SRR4302543.2126865/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302543.2805953/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       >  SRR4302543.7462480/1‑94 (MQ=60)

                        GTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCAC                                                                       <  SRR4302543.5045260/94‑1 (MQ=60)

                           GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC                                                                    >  SRR4302543.7363464/1‑94 (MQ=60)

                           GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC                                                                    >  SRR4302543.1959954/1‑94 (MQ=60)

                           GAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAAC                                                                    <  SRR4302543.643387/94‑1 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302543.125247/94‑1 (MQ=60)

                             AAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAG                                                                  <  SRR4302543.1379613/94‑1 (MQ=60)

                              AAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGG                                                                 <  SRR4302543.3617191/94‑1 (MQ=60)

                               AAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGC                                                                <  SRR4302543.5270702/94‑1 (MQ=60)

                               AAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGC                                                                <  SRR4302543.5270697/94‑1 (MQ=60)

                                AGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCT                                                               >  SRR4302543.6924417/1‑94 (MQ=60)

                                 GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG                                                              <  SRR4302543.5585695/94‑1 (MQ=60)

                                 GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG                                                              >  SRR4302543.4203572/1‑94 (MQ=60)

                                 GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG                                                              >  SRR4302543.4203571/1‑94 (MQ=60)

                                 GCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGAACAACAGGCTG                                                              >  SRR4302543.2568188/1‑94 (MQ=60)

                                 ACAGTTACAGCGACAGCGCAGCGTATCGCTCAGTCTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTG                                                              <  SRR4302543.1867545/94‑1 (MQ=60)

                                   AGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTA                                                            >  SRR4302543.7107125/1‑94 (MQ=60)

                                   AGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTA                                                            >  SRR4302543.5805295/1‑94 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           >  SRR4302543.4851965/1‑94 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           >  SRR4302543.5499124/1‑94 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           <  SRR4302543.6662343/94‑1 (MQ=60)

                                    GTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAA                                                           >  SRR4302543.4851966/1‑94 (MQ=60)

                                     TTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAAC                                                          <  SRR4302543.301105/94‑1 (MQ=60)

                                      TACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACA                                                         >  SRR4302543.5573113/1‑94 (MQ=60)

                                       ACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAA                                                        <  SRR4302543.6529239/94‑1 (MQ=60)

                                        aagccACAGCGCAGCGTATCGCTCATTTTGAGCAGCAAAGGGAAGTCGTTAAAACCACTAAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       <  SRR4302543.3921487/89‑1 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       >  SRR4302543.1029273/1‑94 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       <  SRR4302543.5332497/94‑1 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       >  SRR4302543.6185979/1‑94 (MQ=60)

                                        CAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAAC                                                       <  SRR4302543.7089423/94‑1 (MQ=60)

                                          GCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCT                                                     <  SRR4302543.6383334/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAATTTGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302543.5054110/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302543.2754529/1‑94 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302543.2960710/1‑94 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302543.5053900/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302543.2039434/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   <  SRR4302543.6985601/94‑1 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCT                                                   >  SRR4302543.7404290/1‑94 (MQ=60)

                                            GACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTAT                                                   >  SRR4302543.2531957/1‑94 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA                                                  <  SRR4302543.7874845/94‑1 (MQ=60)

                                             ACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTA                                                  <  SRR4302543.1364745/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302543.135293/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302543.3655638/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302543.3582865/94‑1 (MQ=60)

                                              CAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAAGGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTAC                                                 <  SRR4302543.1731530/94‑1 (MQ=60)

                                               AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC                                                >  SRR4302543.6654282/1‑94 (MQ=60)

                                               AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC                                                <  SRR4302543.6719979/94‑1 (MQ=60)

                                               AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC                                                <  SRR4302543.810298/94‑1 (MQ=60)

                                               AGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACC                                                <  SRR4302543.6719980/94‑1 (MQ=60)

                                                GCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCG                                               >  SRR4302543.1335178/1‑94 (MQ=60)

                                                  GCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTT                                             <  SRR4302543.5854823/94‑1 (MQ=60)

                                                   CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG                                            <  SRR4302543.5691388/94‑1 (MQ=60)

                                                   CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG                                            >  SRR4302543.6158580/1‑94 (MQ=60)

                                                   CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG                                            >  SRR4302543.2671930/1‑94 (MQ=60)

                                                   CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG                                            <  SRR4302543.4118953/94‑1 (MQ=60)

                                                   CAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTG                                            <  SRR4302543.6086531/94‑1 (MQ=60)

                                                    AGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGG                                           <  SRR4302543.516402/94‑1 (MQ=60)

                                                    AGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGG                                           <  SRR4302543.6445815/94‑1 (MQ=60)

                                                     GCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGC                                          <  SRR4302543.5027787/94‑1 (MQ=60)

                                                       GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC                                        >  SRR4302543.2276607/1‑94 (MQ=60)

                                                       GTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGC                                        >  SRR4302543.6392592/1‑94 (MQ=60)

                                                        TATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCA                                       >  SRR4302543.2793042/1‑94 (MQ=60)

                                                         ATCTCTCAGTTTGAGCAGCAAATGGAAGTCGCTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCAT                                      <  SRR4302543.7892755/94‑1 (MQ=60)

                                                         ATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCAT                                      <  SRR4302543.1446391/94‑1 (MQ=60)

                                                         ATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCAT                                      <  SRR4302543.3646772/94‑1 (MQ=60)

                                                         ATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCAT                                      >  SRR4302543.4682045/1‑94 (MQ=60)

                                                          TCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATC                                     <  SRR4302543.6033651/94‑1 (MQ=60)

                                                            GCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTT                                   <  SRR4302543.5968446/94‑1 (MQ=60)

                                                             CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC                                  <  SRR4302543.7533846/94‑1 (MQ=60)

                                                             CTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTC                                  >  SRR4302543.5703341/1‑94 (MQ=60)

                                                              TCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCC                                 <  SRR4302543.3050620/94‑1 (MQ=60)

                                                              TCAGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCC                                 >  SRR4302543.3036550/1‑94 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               >  SRR4302543.7583910/1‑94 (MQ=60)

                                                                AGTTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAG                               <  SRR4302543.5163061/94‑1 (MQ=60)

                                                                  TTTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCG                             <  SRR4302543.4411980/94‑1 (MQ=60)

                                                                   TTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGT                            <  SRR4302543.5879413/94‑1 (MQ=60)

                                                                   TTGAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCCTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGT                            <  SRR4302543.5515655/94‑1 (MQ=60)

                                                                     GAGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTT                          >  SRR4302543.204740/1‑94 (MQ=60)

                                                                      AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC                         <  SRR4302543.3749186/94‑1 (MQ=60)

                                                                      AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC                         >  SRR4302543.7422803/1‑94 (MQ=60)

                                                                      AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC                         <  SRR4302543.3749187/94‑1 (MQ=60)

                                                                      AGCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTC                         >  SRR4302543.6269730/1‑94 (MQ=60)

                                                                       GCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCG                        <  SRR4302543.1052636/94‑1 (MQ=60)

                                                                       GCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCG                        <  SRR4302543.5622756/94‑1 (MQ=60)

                                                                       GCAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCG                        <  SRR4302543.2708874/94‑1 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAATACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA                       >  SRR4302543.7735591/1‑94 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAGACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGC                       >  SRR4302543.7735590/1‑94 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAGACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA                       >  SRR4302543.7735589/1‑94 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGGAGCGTGCACAACAGGATGTCACAACGTCTACCGTTGGCGCCTCTTCAAGCGTTTCGA                       >  SRR4302543.4167442/1‑94 (MQ=60)

                                                                        CAGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGA                       >  SRR4302543.4785890/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACTACTGAAGCCATGCAGCGTGCACAACGGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302543.357793/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302543.6285963/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302543.6318503/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302543.8005979/94‑1 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302543.6163665/94‑1 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      >  SRR4302543.5202431/1‑94 (MQ=60)

                                                                         AGCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGAC                      <  SRR4302543.5156826/94‑1 (MQ=60)

                                                                          GCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACA                     >  SRR4302543.6131450/1‑94 (MQ=60)

                                                                          GCAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACA                     <  SRR4302543.2182383/94‑1 (MQ=60)

                                                                           CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG                    >  SRR4302543.4460302/1‑94 (MQ=60)

                                                                           CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG                    <  SRR4302543.6211702/94‑1 (MQ=60)

                                                                           CAAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAG                    >  SRR4302543.1005398/1‑94 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   <  SRR4302543.1237139/94‑1 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   <  SRR4302543.4463670/94‑1 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   >  SRR4302543.3655285/1‑94 (MQ=60)

                                                                            AAATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGC                   >  SRR4302543.5104946/1‑94 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302543.6706057/94‑1 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  >  SRR4302543.2044724/1‑94 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302543.3445307/94‑1 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302543.7254790/94‑1 (MQ=60)

                                                                             AATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCG                  <  SRR4302543.3183946/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302543.353703/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302543.7313185/94‑1 (MQ=60)

                                                                              ATGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGG                 <  SRR4302543.5300247/94‑1 (MQ=60)

                                                                               TGGAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGC                >  SRR4302543.3218273/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              <  SRR4302543.2762370/94‑1 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              >  SRR4302543.2798901/1‑94 (MQ=60)

                                                                                 GAAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAG              <  SRR4302543.354725/94‑1 (MQ=60)

                                                                                  AAGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGA             >  SRR4302543.1037828/1‑94 (MQ=60)

                                                                                   AGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAA            >  SRR4302543.7202706/1‑94 (MQ=60)

                                                                                   AGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAA            >  SRR4302543.3668359/1‑94 (MQ=60)

                                                                                   AGTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAA            >  SRR4302543.6951116/1‑94 (MQ=60)

                                                                                    GTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAT           >  SRR4302543.4212878/1‑94 (MQ=60)

                                                                                    GTCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAAT           <  SRR4302543.1042584/94‑1 (MQ=60)

                                                                                     TCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATC          >  SRR4302543.6461559/1‑94 (MQ=60)

                                                                                     TCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATC          <  SRR4302543.1914815/94‑1 (MQ=60)

                                                                                     TCGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATC          <  SRR4302543.7794924/94‑1 (MQ=60)

                                                                                      CGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCC         <  SRR4302543.4894322/94‑1 (MQ=60)

                                                                                      CGTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCC         >  SRR4302543.3577180/1‑94 (MQ=60)

                                                                                       GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT        <  SRR4302543.1506713/94‑1 (MQ=60)

                                                                                       GTTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCT        <  SRR4302543.7921717/94‑1 (MQ=60)

                                                                                        TTAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTT       <  SRR4302543.1642575/94‑1 (MQ=60)

                                                                                         TAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA      >  SRR4302543.7809073/1‑94 (MQ=60)

                                                                                         TAAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTA      <  SRR4302543.7850592/94‑1 (MQ=60)

                                                                                          AAAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAA     <  SRR4302543.1072573/94‑1 (MQ=60)

                                                                                           AAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA    <  SRR4302543.1625479/94‑1 (MQ=60)

                                                                                           AAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA    >  SRR4302543.3057714/1‑94 (MQ=60)

                                                                                           AAACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAA    >  SRR4302543.2832463/1‑94 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  <  SRR4302543.152071/94‑1 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  <  SRR4302543.1827808/94‑1 (MQ=60)

                                                                                             ACCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  >  SRR4302543.878970/1‑94 (MQ=60)

AATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAAC  >  NC_000913/4408467‑4408653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`