Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,409,046	C→T	A56V (GCC→GTC)	yjfK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,409,046	0	C	T	99.7%	1051.1 / ‑6.0	301	A56V (GCC→GTC)	yjfK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (146/154); total (146/155)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.38e-01

Only 100 of 332 total aligned reads displayed.

TCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC  >  NC_000913/4408956‑4409137

tcAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAgtcg                                                                                           >  1:1755804/1‑93 (MQ=255)

  aaTAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAgtcgcc                                                                                         >  2:3980960/1‑93 (MQ=255)

  aaTAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAgtcgcc                                                                                         >  2:6919083/1‑93 (MQ=255)

     aGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGTAATTTACGGTAGTCGCCGTc                                                                                      <  1:3765642/93‑1 (MQ=255)

     aGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTc                                                                                      <  1:1033003/93‑1 (MQ=255)

      gTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGATGCCGGGTGAGGAATTTACGGTAGTCGCCGTCa                                                                                     >  1:7615805/1‑93 (MQ=255)

        ggCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGc                                                                                   >  1:6166067/1‑93 (MQ=255)

           tttACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCcac                                                                                >  1:4963349/1‑93 (MQ=255)

           tttACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCcac                                                                                >  1:1251591/1‑93 (MQ=255)

            ttACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCcaca                                                                               <  1:4219557/93‑1 (MQ=255)

             tACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAt                                                                              <  2:2009228/93‑1 (MQ=255)

             tACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAt                                                                              >  1:5510090/1‑93 (MQ=255)

                gCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGa                                                                           <  1:2221479/93‑1 (MQ=255)

                 cTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCgct                                                                          >  2:5876744/1‑91 (MQ=255)

                 cTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAt                                                                          <  1:902166/93‑1 (MQ=255)

                 cTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAt                                                                          <  2:5379516/93‑1 (MQ=255)

                 cTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAt                                                                          >  1:5701504/1‑93 (MQ=255)

                 cTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAt                                                                          <  1:5085918/93‑1 (MQ=255)

                  tCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATc                                                                         <  1:7778128/93‑1 (MQ=255)

                    gACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTg                                                                       <  1:879606/93‑1 (MQ=255)

                    gACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTg                                                                       <  1:6224027/93‑1 (MQ=255)

                    gACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTg                                                                       <  2:300429/93‑1 (MQ=255)

                      cacGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTggg                                                                     >  1:11667/1‑93 (MQ=255)

                      cacGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTggg                                                                     >  2:7135198/1‑93 (MQ=255)

                       acGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggc                                                                    >  2:6148785/1‑93 (MQ=255)

                       acGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggc                                                                    <  1:7464085/93‑1 (MQ=255)

                       acGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggc                                                                    >  1:2724462/1‑93 (MQ=255)

                          ttAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCCGCCACATCGATCTGggcggc                                                                 >  1:4066724/1‑93 (MQ=255)

                          ttAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggcggc                                                                 >  1:6976058/1‑93 (MQ=255)

                          ttAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggcggc                                                                 <  1:5202209/93‑1 (MQ=255)

                          ttAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGggcggc                                                                 <  1:4669257/93‑1 (MQ=255)

                           tAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGgcggcg                                                                >  2:1653874/1‑93 (MQ=255)

                           tAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGgcggcg                                                                <  1:6302587/93‑1 (MQ=255)

                           tAGCGTTTCGTTTGCTGGAAGATCAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGgcggcg                                                                <  2:4282294/93‑1 (MQ=255)

                            aGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGACCTCGTcggcgg                                                               >  2:1151961/1‑93 (MQ=255)

                              cgtttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTa                                                             <  2:367839/93‑1 (MQ=255)

                              cgtttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTa                                                             <  1:7664880/93‑1 (MQ=255)

                               gtttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCTGTCAGCCACATCGATCTGGGCGGCGGTAg                                                            <  2:583005/93‑1 (MQ=255)

                               gtttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAg                                                            >  2:3499796/1‑93 (MQ=255)

                               gtttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAg                                                            <  1:6327588/93‑1 (MQ=255)

                                tttcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGt                                                           >  1:5135313/1‑93 (MQ=255)

                                  tcgtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCa                                                         <  1:3970094/93‑1 (MQ=255)

                                    gtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCCGCCACATCGATCTGGGCGGCGGTAGTCAGa                                                       >  2:4057692/1‑93 (MQ=255)

                                    gtttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGa                                                       >  1:2562425/1‑93 (MQ=255)

                                     tttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAt                                                      >  1:6880120/1‑93 (MQ=255)

                                      ttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAtt                                                     >  1:2304762/1‑93 (MQ=255)

                                      ttGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGCCAGAtt                                                     >  2:2590914/1‑93 (MQ=255)

                                      ttGCTGGAAGATGAATTGCTGATGGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAtt                                                     <  2:4356081/93‑1 (MQ=255)

                                       tGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAttt                                                    >  2:4997969/1‑93 (MQ=255)

                                          tGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTcc                                                 <  2:7756054/93‑1 (MQ=255)

                                          tGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTcc                                                 >  2:7529377/1‑93 (MQ=255)

                                            gAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGc                                               >  1:6749163/1‑93 (MQ=255)

                                            gAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGc                                               >  2:6632959/1‑93 (MQ=255)

                                              aGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGcta                                             <  2:2249091/93‑1 (MQ=255)

                                              aGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGcta                                             >  1:2891971/1‑93 (MQ=255)

                                               gATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGctac                                            <  2:4650114/93‑1 (MQ=255)

                                               gATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGctac                                            >  2:5082655/1‑93 (MQ=255)

                                                aTGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGctact                                           >  2:2100634/1‑93 (MQ=255)

                                                 tGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGctacta                                          >  2:3805934/1‑93 (MQ=255)

                                                  gAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCtactac                                         <  1:3268437/93‑1 (MQ=255)

                                                      tGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACtt                                     <  2:1420060/93‑1 (MQ=255)

                                                      tGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACtt                                     >  2:2526902/1‑93 (MQ=255)

                                                       gCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTc                                    <  2:6417276/93‑1 (MQ=255)

                                                       gCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTc                                    <  2:3946088/93‑1 (MQ=255)

                                                       gCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTc                                    >  1:205931/1‑93 (MQ=255)

                                                         ttaTTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAg                                  <  1:7859617/91‑1 (MQ=255)

                                                         tGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAg                                  >  2:2167485/1‑93 (MQ=255)

                                                         tGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAg                                  <  2:1482248/93‑1 (MQ=255)

                                                         tGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAg                                  <  2:5250422/93‑1 (MQ=255)

                                                          gATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAgg                                 <  1:7334266/93‑1 (MQ=255)

                                                           aTTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGc                                >  2:7297012/1‑93 (MQ=255)

                                                            ttGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCg                               >  2:5502536/1‑93 (MQ=255)

                                                             tGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGa                              <  2:4074520/93‑1 (MQ=255)

                                                             tGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGa                              <  1:3544363/93‑1 (MQ=255)

                                                              gcgcTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGAt                             <  1:1895218/93‑1 (MQ=255)

                                                                gcTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGa                           <  1:1067735/93‑1 (MQ=255)

                                                                  tGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGt                         >  2:3408908/1‑93 (MQ=255)

                                                                   gCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGtt                        <  2:3226034/93‑1 (MQ=255)

                                                                   gCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGtt                        <  1:1493377/93‑1 (MQ=255)

                                                                   gCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGtt                        >  1:4527819/1‑93 (MQ=255)

                                                                    ccGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGttt                       <  1:243378/93‑1 (MQ=255)

                                                                    ccGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGttt                       <  2:682914/93‑1 (MQ=255)

                                                                     cGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTc                      <  1:5261211/93‑1 (MQ=255)

                                                                      gggTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCt                     >  1:3181160/1‑93 (MQ=255)

                                                                      gggTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCt                     <  1:4840618/93‑1 (MQ=255)

                                                                       ggTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTg                    <  2:2422899/93‑1 (MQ=255)

                                                                           agcaaTTTGCGGTAGGCCGCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCaaa                <  2:7709623/90‑1 (MQ=255)

                                                                           aGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCaaa                >  2:6885383/1‑93 (MQ=255)

                                                                           aGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCaaa                <  1:3452175/93‑1 (MQ=255)

                                                                               aTTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCaa            <  1:4171173/93‑1 (MQ=255)

                                                                               aTTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCaa            >  2:2300485/1‑93 (MQ=255)

                                                                                tttACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAAt           <  1:3835462/93‑1 (MQ=255)

                                                                                tttACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAAt           <  1:5994734/93‑1 (MQ=255)

                                                                                 ttACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATa          <  2:879804/93‑1 (MQ=255)

                                                                                  tcgggTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATac         <  1:1631926/90‑1 (MQ=255)

                                                                                   aCGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATacc        >  2:2959325/1‑93 (MQ=255)

                                                                                    cGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATacca       >  2:1866531/1‑93 (MQ=255)

                                                                                    cGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATacca       >  1:2143413/1‑93 (MQ=255)

                                                                                      gTAGTCCCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATaccacc     <  1:7152996/93‑1 (MQ=255)

                                                                                       tAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACcg    <  2:4849396/93‑1 (MQ=255)

TCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC  >  NC_000913/4408956‑4409137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGG  >  NC_000913/4408953‑4409139

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGT                                                                                               >  SRR4302543.6195763/1‑94 (MQ=60)

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGT                                                                                               >  SRR4302543.3651695/1‑94 (MQ=60)

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGT                                                                                               >  SRR4302543.3007426/1‑94 (MQ=60)

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGT                                                                                               >  SRR4302543.7353900/1‑94 (MQ=60)

 TCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTC                                                                                              <  SRR4302543.6968597/94‑1 (MQ=60)

 TCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTC                                                                                              <  SRR4302543.4982575/94‑1 (MQ=60)

 TCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTC                                                                                              <  SRR4302543.3337824/94‑1 (MQ=60)

  CTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCG                                                                                             >  SRR4302543.1771486/1‑94 (MQ=60)

  CTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCG                                                                                             >  SRR4302543.3491878/1‑94 (MQ=60)

    CAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCC                                                                                           >  SRR4302543.7007836/1‑94 (MQ=60)

     AATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCG                                                                                          >  SRR4302543.1059401/1‑94 (MQ=60)

      ATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGT                                                                                         >  SRR4302543.5422846/1‑94 (MQ=60)

       TAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTC                                                                                        >  SRR4302543.1833106/1‑94 (MQ=60)

       TAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTC                                                                                        >  SRR4302543.6256887/1‑94 (MQ=60)

        AGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGTAATTTACGGTAGTCGCCGTCA                                                                                       <  SRR4302543.3798794/94‑1 (MQ=60)

        AGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCA                                                                                       >  SRR4302543.239099/1‑94 (MQ=60)

        AGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCA                                                                                       <  SRR4302543.1453365/94‑1 (MQ=60)

        AGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCA                                                                                       <  SRR4302543.1042174/94‑1 (MQ=60)

        AGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGATGCCGGGTGAGGAATTTACGGTAGTCGCCGTCA                                                                                       >  SRR4302543.7688103/1‑94 (MQ=60)

         GTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAG                                                                                      >  SRR4302543.7938926/1‑94 (MQ=60)

         GTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAG                                                                                      >  SRR4302543.2552841/1‑94 (MQ=60)

         GTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAG                                                                                      <  SRR4302543.6270327/94‑1 (MQ=60)

          TGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGC                                                                                     >  SRR4302543.6224413/1‑94 (MQ=60)

           GGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCC                                                                                    >  SRR4302543.7362028/1‑94 (MQ=60)

             CTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCAC                                                                                  >  SRR4302543.1262813/1‑94 (MQ=60)

             CTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCAC                                                                                  >  SRR4302543.5008529/1‑94 (MQ=60)

             CTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCAC                                                                                  >  SRR4302543.7544158/1‑94 (MQ=60)

             CTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCAC                                                                                  >  SRR4302543.2199711/1‑94 (MQ=60)

              TTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACA                                                                                 <  SRR4302543.6038266/94‑1 (MQ=60)

               TTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAT                                                                                <  SRR4302543.4257807/94‑1 (MQ=60)

               TTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAT                                                                                <  SRR4302543.3456013/94‑1 (MQ=60)

               TTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAT                                                                                >  SRR4302543.5560117/1‑94 (MQ=60)

               TTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACAT                                                                                <  SRR4302543.4257808/94‑1 (MQ=60)

                 ACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCG                                                                              <  SRR4302543.7921765/94‑1 (MQ=60)

                   GCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAT                                                                            <  SRR4302543.4900550/94‑1 (MQ=60)

                   GCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAT                                                                            >  SRR4302543.5753507/1‑94 (MQ=60)

                   GCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAT                                                                            >  SRR4302543.5753509/1‑94 (MQ=60)

                   GCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGAT                                                                            <  SRR4302543.2241525/94‑1 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           <  SRR4302543.910120/94‑1 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           >  SRR4302543.5030506/1‑94 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           <  SRR4302543.5132024/94‑1 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           >  SRR4302543.4586130/1‑94 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           >  SRR4302543.5294781/1‑94 (MQ=60)

                    CTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATC                                                                           >  SRR4302543.898233/1‑94 (MQ=60)

                     TCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCT                                                                          <  SRR4302543.2040379/94‑1 (MQ=60)

                     TCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCT                                                                          <  SRR4302543.7851479/94‑1 (MQ=60)

                     TCGACACGTTAGCGTTTCGTTTGCGGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCT                                                                          <  SRR4302543.2194800/94‑1 (MQ=60)

                     TCGACACGTTAGCGTTTCCTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCT                                                                          <  SRR4302543.4371327/94‑1 (MQ=60)

                      CGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTG                                                                         <  SRR4302543.5765607/94‑1 (MQ=60)

                       GACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGG                                                                        <  SRR4302543.1094594/94‑1 (MQ=60)

                       GACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGG                                                                        <  SRR4302543.6282779/94‑1 (MQ=60)

                       GACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGG                                                                        <  SRR4302543.887417/94‑1 (MQ=60)

                        ACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGG                                                                       >  SRR4302543.11769/1‑94 (MQ=60)

                         CACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGC                                                                      >  SRR4302543.2749245/1‑94 (MQ=60)

                         CACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGC                                                                      <  SRR4302543.5384465/94‑1 (MQ=60)

                         CACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGC                                                                      >  SRR4302543.2749244/1‑94 (MQ=60)

                          ACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCG                                                                     <  SRR4302543.7535589/94‑1 (MQ=60)

                          ACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCG                                                                     >  SRR4302543.3149479/1‑94 (MQ=60)

                          ACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCG                                                                     >  SRR4302543.5171488/1‑94 (MQ=60)

                           CGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGG                                                                    >  SRR4302543.2587974/1‑94 (MQ=60)

                            GTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCCGCCACATCGATCTGGGCGGC                                                                   >  SRR4302543.4103149/1‑94 (MQ=60)

                            GTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGC                                                                   >  SRR4302543.4103148/1‑94 (MQ=60)

                            GTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGC                                                                   >  SRR4302543.4904771/1‑94 (MQ=60)

                            GTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGC                                                                   >  SRR4302543.7041711/1‑94 (MQ=60)

                             TTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCG                                                                  <  SRR4302543.4711816/94‑1 (MQ=60)

                             TTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCG                                                                  <  SRR4302543.5701231/94‑1 (MQ=60)

                             TTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCG                                                                  <  SRR4302543.5249110/94‑1 (MQ=60)

                              TAGCGTTTTGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGG                                                                 <  SRR4302543.6233678/94‑1 (MQ=60)

                              TAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGG                                                                 >  SRR4302543.4618291/1‑94 (MQ=60)

                              TAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGG                                                                 <  SRR4302543.1878220/94‑1 (MQ=60)

                              TAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGG                                                                 <  SRR4302543.6361885/94‑1 (MQ=60)

                                 CGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAG                                                              <  SRR4302543.6380413/94‑1 (MQ=60)

                                 CGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAG                                                              <  SRR4302543.7737531/94‑1 (MQ=60)

                                  GTTTCGTTTGCTGGATGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGT                                                             >  SRR4302543.3543631/1‑94 (MQ=60)

                                  GTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGT                                                             <  SRR4302543.6387098/94‑1 (MQ=60)

                                  GTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGT                                                             >  SRR4302543.5181731/1‑94 (MQ=60)

                                  GTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGT                                                             <  SRR4302543.772466/94‑1 (MQ=60)

                                   TTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTC                                                            <  SRR4302543.7447840/94‑1 (MQ=60)

                                   TTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTC                                                            >  SRR4302543.1698851/1‑94 (MQ=60)

                                   TTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTC                                                            >  SRR4302543.1942158/1‑94 (MQ=60)

                                    TTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGTTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCA                                                           <  SRR4302543.3627645/94‑1 (MQ=60)

                                    TTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCA                                                           <  SRR4302543.7704422/94‑1 (MQ=60)

                                    TTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCA                                                           <  SRR4302543.6360391/94‑1 (MQ=60)

                                     TCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAG                                                          <  SRR4302543.4005284/94‑1 (MQ=60)

                                     TCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAG                                                          >  SRR4302543.2136904/1‑94 (MQ=60)

                                     TCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAG                                                          <  SRR4302543.901422/94‑1 (MQ=60)

                                      CGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGA                                                         >  SRR4302543.3283530/1‑94 (MQ=60)

                                      CGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGA                                                         >  SRR4302543.2585836/1‑94 (MQ=60)

                                      CGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGA                                                         >  SRR4302543.118510/1‑94 (MQ=60)

                                      CGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGA                                                         >  SRR4302543.1410492/1‑94 (MQ=60)

                                       GTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAT                                                        <  SRR4302543.1086602/94‑1 (MQ=60)

                                       GTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAT                                                        <  SRR4302543.5282207/94‑1 (MQ=60)

                                       GTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAT                                                        >  SRR4302543.1711610/1‑94 (MQ=60)

                                       GTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGAT                                                        >  SRR4302543.6944863/1‑94 (MQ=60)

                                        TTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATT                                                       >  SRR4302543.2325756/1‑94 (MQ=60)

                                        GTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATT                                                       <  SRR4302543.2560432/94‑1 (MQ=60)

                                         TTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGTCGGCGGTAGTCAGATTT                                                      <  SRR4302543.3520346/94‑1 (MQ=60)

                                            CTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCC                                                   >  SRR4302543.6884787/1‑94 (MQ=60)

                                            CTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCC                                                   >  SRR4302543.1184935/1‑94 (MQ=60)

                                            CTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCC                                                   >  SRR4302543.7126078/1‑94 (MQ=60)

                                            CTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCC                                                   <  SRR4302543.3427158/94‑1 (MQ=60)

                                             TGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCG                                                  >  SRR4302543.6654606/1‑94 (MQ=60)

                                              GGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGC                                                 >  SRR4302543.6812900/1‑94 (MQ=60)

                                               GAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCT                                                >  SRR4302543.6956583/1‑94 (MQ=60)

                                                AAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTA                                               >  SRR4302543.2918273/1‑94 (MQ=60)

                                                 AGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTAC                                              >  SRR4302543.7975796/1‑94 (MQ=60)

                                                  GATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACT                                             <  SRR4302543.4820163/94‑1 (MQ=60)

                                                    TGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTAC                                           >  SRR4302543.2365592/1‑94 (MQ=60)

                                                     GAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACA                                          <  SRR4302543.3297970/94‑1 (MQ=60)

                                                     GAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACA                                          <  SRR4302543.6840661/94‑1 (MQ=60)

                                                      AATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACAC                                         >  SRR4302543.3937262/1‑94 (MQ=60)

                                                      AATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACAC                                         >  SRR4302543.3818663/1‑94 (MQ=60)

                                                       ATTGCTGATTGCGCTGCCGGGTGAGGAATTTCTGGTAGTCGCCGTCCGCGACATCGATCTGGGCGGCGGTGGTAAGATTTTCCTCTACTACACT                                        >  SRR4302543.2594568/1‑94 (MQ=60)

                                                       ATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACT                                        >  SRR4302543.386647/1‑94 (MQ=60)

                                                         TGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTC                                      >  SRR4302543.207674/1‑94 (MQ=60)

                                                         TGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTC                                      >  SRR4302543.5640445/1‑94 (MQ=60)

                                                         TGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTC                                      >  SRR4302543.2184200/1‑94 (MQ=60)

                                                           CTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAG                                    <  SRR4302543.3249693/94‑1 (MQ=60)

                                                           CTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAG                                    >  SRR4302543.2298918/1‑94 (MQ=60)

                                                           CTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAG                                    <  SRR4302543.7285105/94‑1 (MQ=60)

                                                            TTATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGG                                   <  SRR4302543.7933652/94‑1 (MQ=60)

                                                            TGATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGG                                   <  SRR4302543.4993724/94‑1 (MQ=60)

                                                             GATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGC                                  >  SRR4302543.6425531/1‑94 (MQ=60)

                                                             GATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGC                                  <  SRR4302543.7404836/94‑1 (MQ=60)

                                                             GATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGC                                  >  SRR4302543.4073352/1‑94 (MQ=60)

                                                             GATTGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGC                                  >  SRR4302543.7773925/1‑94 (MQ=60)

                                                               TTGCGCTGCCGGGGGAGTAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGA                                <  SRR4302543.2871119/94‑1 (MQ=60)

                                                                TGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGAT                               <  SRR4302543.3575844/94‑1 (MQ=60)

                                                                TGCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGAT                               >  SRR4302543.2734235/1‑94 (MQ=60)

                                                                 GCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATG                              <  SRR4302543.7577837/94‑1 (MQ=60)

                                                                 GCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATG                              <  SRR4302543.1912262/94‑1 (MQ=60)

                                                                 GCGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATG                              <  SRR4302543.1813860/94‑1 (MQ=60)

                                                                  CGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGA                             >  SRR4302543.7437481/1‑94 (MQ=60)

                                                                  CGCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGA                             <  SRR4302543.7761939/94‑1 (MQ=60)

                                                                   GCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAG                            <  SRR4302543.7204914/94‑1 (MQ=60)

                                                                   GCTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAG                            <  SRR4302543.1077332/94‑1 (MQ=60)

                                                                    CTGCCGGGTGAGGAATTTATGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGT                           >  SRR4302543.4124769/1‑94 (MQ=60)

                                                                    CTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGT                           >  SRR4302543.3930567/1‑94 (MQ=60)

                                                                    CTGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGT                           >  SRR4302543.4124767/1‑94 (MQ=60)

                                                                     TGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTT                          >  SRR4302543.4569030/1‑94 (MQ=60)

                                                                     TGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTT                          >  SRR4302543.4245903/1‑94 (MQ=60)

                                                                     TGCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTT                          >  SRR4302543.5161361/1‑94 (MQ=60)

                                                                      GCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTT                         <  SRR4302543.1506815/94‑1 (MQ=60)

                                                                      GCCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTT                         <  SRR4302543.6767112/94‑1 (MQ=60)

                                                                       CCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTC                        <  SRR4302543.245486/94‑1 (MQ=60)

                                                                       CCGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTC                        <  SRR4302543.7057261/94‑1 (MQ=60)

                                                                        CGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCT                       <  SRR4302543.5308674/94‑1 (MQ=60)

                                                                        CGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCT                       <  SRR4302543.29347/94‑1 (MQ=60)

                                                                        CGGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCT                       >  SRR4302543.3209841/1‑94 (MQ=60)

                                                                         GGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTG                      >  SRR4302543.1544381/1‑94 (MQ=60)

                                                                         GGGTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTG                      <  SRR4302543.4884760/94‑1 (MQ=60)

                                                                           GTGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCA                    >  SRR4302543.5234055/1‑94 (MQ=60)

                                                                            TGAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAA                   <  SRR4302543.4371690/94‑1 (MQ=60)

                                                                             GAGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAA                  >  SRR4302543.3631760/1‑94 (MQ=60)

                                                                              AGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAAT                 >  SRR4302543.5247743/1‑94 (MQ=60)

                                                                              AGGAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAAT                 <  SRR4302543.3483089/94‑1 (MQ=60)

                                                                                GAATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCA               >  SRR4302543.933905/1‑94 (MQ=60)

                                                                                  ATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAAT             <  SRR4302543.1055421/94‑1 (MQ=60)

                                                                                  ATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAAT             <  SRR4302543.4208945/94‑1 (MQ=60)

                                                                                  ATTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAAT             <  SRR4302543.7584002/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            <  SRR4302543.3869307/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            <  SRR4302543.7885500/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            <  SRR4302543.6049681/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            <  SRR4302543.7885501/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            <  SRR4302543.2505073/94‑1 (MQ=60)

                                                                                   TTTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATA            >  SRR4302543.5188408/1‑94 (MQ=60)

                                                                                    TTACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATAC           <  SRR4302543.3911532/94‑1 (MQ=60)

                                                                                     tcgGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACC          <  SRR4302543.1646476/91‑1 (MQ=60)

                                                                                     TACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACC          <  SRR4302543.5018370/94‑1 (MQ=60)

                                                                                     TACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACC          <  SRR4302543.2111001/94‑1 (MQ=60)

                                                                                     TACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACC          <  SRR4302543.6314022/94‑1 (MQ=60)

                                                                                      ACGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCA         >  SRR4302543.2162600/1‑94 (MQ=60)

                                                                                       CGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCAC        <  SRR4302543.6066563/94‑1 (MQ=60)

                                                                                       CGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCAC        <  SRR4302543.1434563/94‑1 (MQ=60)

                                                                                       CGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCAC        <  SRR4302543.6371332/94‑1 (MQ=60)

                                                                                       CGGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCAC        <  SRR4302543.3081988/94‑1 (MQ=60)

                                                                                        GGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACC       <  SRR4302543.4472333/94‑1 (MQ=60)

                                                                                        GGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACC       <  SRR4302543.2308069/94‑1 (MQ=60)

                                                                                        GGTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACC       >  SRR4302543.1633893/1‑94 (MQ=60)

                                                                                         GTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCG      <  SRR4302543.4853903/94‑1 (MQ=60)

                                                                                         GTAGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCG      <  SRR4302543.6155046/94‑1 (MQ=60)

                                                                                         GTAGTCCCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCG      <  SRR4302543.7222515/94‑1 (MQ=60)

                                                                                           AGTCGCGGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC    <  SRR4302543.444332/94‑1 (MQ=60)

                                                                                           AGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC    <  SRR4302543.198160/94‑1 (MQ=60)

                                                                                           AGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC    >  SRR4302543.7512226/1‑94 (MQ=60)

                                                                                           AGTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC    >  SRR4302543.5461171/1‑94 (MQ=60)

                                                                                           AGTCGCCGTCAGCCACATCGATCTGGGCGGCGGCAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGC    >  SRR4302543.7512227/1‑94 (MQ=60)

                                                                                            GTCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCG   <  SRR4302543.6860981/94‑1 (MQ=60)

                                                                                             TCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGG  <  SRR4302543.4524546/94‑1 (MQ=60)

                                                                                             TCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGG  >  SRR4302543.7673017/1‑94 (MQ=60)

ATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGG  >  NC_000913/4408953‑4409139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`