Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,414,467 A→G intergenic (‑119/‑63) b4189 ← / → yjfP hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,414,4670AG99.7% 1131.8 / ‑5.2 356intergenic (‑119/‑63)b4189/yjfPhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (162/193);  total (163/193)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.21e-01

Only 100 of 365 total aligned reads displayed.

GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556
                                                                                          |                                                                                         
ggggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGcc                                                                                         >  1:3629619/1‑93 (MQ=255)
  ggAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGc                                                                                       <  2:5907182/93‑1 (MQ=255)
   gAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATgccgcc                                                                                      <  1:2682567/93‑1 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGTTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     >  2:4983971/1‑93 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     <  1:3555022/93‑1 (MQ=255)
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     <  2:5197776/93‑1 (MQ=255)
     aTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag                                                                                    >  1:5706177/1‑93 (MQ=255)
     aTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag                                                                                    >  1:1044047/1‑93 (MQ=255)
     aTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag                                                                                    >  2:446760/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  1:3986198/1‑93 (MQ=255)
       gTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagca                                                                                  >  1:540562/1‑93 (MQ=255)
           ccGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGaaa                                                                              >  1:997354/1‑93 (MQ=255)
           ccGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGaaa                                                                              <  2:302774/93‑1 (MQ=255)
           ccGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGaaa                                                                              <  2:4705296/93‑1 (MQ=255)
            cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc                                                                             >  1:6848544/1‑93 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           >  2:4733245/1‑93 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           >  1:2376847/1‑93 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           >  1:3921022/1‑93 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          <  2:330830/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          <  1:7322806/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          <  2:867411/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          >  2:4621084/1‑93 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          <  1:1364294/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          <  2:4094271/93‑1 (MQ=255)
                ttGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtgg                                                                         >  2:2633365/1‑92 (MQ=255)
                  gTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGc                                                                       <  1:4615436/93‑1 (MQ=255)
                  gTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGc                                                                       <  2:1338359/93‑1 (MQ=255)
                  gTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGc                                                                       <  2:7700926/93‑1 (MQ=255)
                    tACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTa                                                                     <  2:1926331/93‑1 (MQ=255)
                      ccTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAg                                                                   >  1:5966751/1‑93 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 <  1:6624338/93‑1 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 <  1:1247072/93‑1 (MQ=255)
                         ggTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAt                                                                >  1:5330871/1‑93 (MQ=255)
                         ggTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAt                                                                >  1:707777/1‑93 (MQ=255)
                         ggTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAt                                                                <  1:5618555/93‑1 (MQ=255)
                          gTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAtt                                                               >  2:3934733/1‑93 (MQ=255)
                           tACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAttt                                                              >  2:6548656/1‑93 (MQ=255)
                            aCGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttc                                                             >  2:1362369/1‑93 (MQ=255)
                               cgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttcttc                                                          <  2:6366543/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  1:4696922/93‑1 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        >  2:6773476/1‑93 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        >  1:7788340/1‑93 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        <  1:816192/93‑1 (MQ=255)
                                 aTTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAt                                                        <  1:158246/93‑1 (MQ=255)
                                  ttttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATg                                                       >  2:4545855/1‑93 (MQ=255)
                                     tCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCa                                                    >  1:330579/1‑93 (MQ=255)
                                     tCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCa                                                    <  1:4218961/93‑1 (MQ=255)
                                      cGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAt                                                   <  2:6073569/93‑1 (MQ=255)
                                       gAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATa                                                  <  2:114109/93‑1 (MQ=255)
                                          tGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCa                                               >  1:2831628/1‑93 (MQ=255)
                                              aaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACa                                           >  2:7373025/1‑93 (MQ=255)
                                               aCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaa                                          >  1:504495/1‑93 (MQ=255)
                                                cGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaa                                         <  1:6304581/93‑1 (MQ=255)
                                                 gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa                                        >  2:663868/1‑93 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTCTGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       >  1:7502882/1‑93 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  1:1810749/93‑1 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  2:2785410/93‑1 (MQ=255)
                                                  tGACGAAAGCGTAAACCACATCACAACAGTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  1:6419600/93‑1 (MQ=255)
                                                    aCGAAAGCGTAATCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAgg                                     <  1:1072352/93‑1 (MQ=255)
                                                    aCGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAgg                                     <  2:1627818/93‑1 (MQ=255)
                                                     cGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGga                                    >  2:1070128/1‑93 (MQ=255)
                                                     agAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGga                                    <  2:6182452/92‑1 (MQ=255)
                                                      gAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgag                                   >  1:4778528/1‑93 (MQ=255)
                                                      gAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgag                                   <  2:4499502/93‑1 (MQ=255)
                                                       aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga                                  <  1:2083122/93‑1 (MQ=255)
                                                         aGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgagaga                                >  2:2081238/1‑93 (MQ=255)
                                                         aGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgagaga                                >  2:2372668/1‑93 (MQ=255)
                                                          gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               <  1:3262950/93‑1 (MQ=255)
                                                            gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg                             >  1:2907759/1‑93 (MQ=255)
                                                            gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg                             >  1:5506328/1‑93 (MQ=255)
                                                             tAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAga                            >  1:2212278/1‑93 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat                           <  1:655836/93‑1 (MQ=255)
                                                                ccgccaTCTCAACATTCGGCACTAATTCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATCCCAGAAAAAAAGGAGAGACAgatga                         <  1:654891/89‑1 (MQ=255)
                                                                cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga                         >  2:227621/1‑93 (MQ=255)
                                                                cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga                         <  1:4937599/93‑1 (MQ=255)
                                                                 ccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatgat                        >  2:1476051/1‑93 (MQ=255)
                                                                   acaTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTg                      >  1:1492618/1‑93 (MQ=255)
                                                                   acaTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGCGCTACGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTg                      >  1:5297096/1‑93 (MQ=255)
                                                                    caTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGa                     <  1:4364838/93‑1 (MQ=255)
                                                                    caTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGa                     >  2:5551980/1‑93 (MQ=255)
                                                                    aaTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGa                     <  2:5793139/92‑1 (MQ=255)
                                                                     aTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaa                    >  1:4119596/1‑93 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGGTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   >  1:5140246/1‑93 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  2:3698420/93‑1 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  1:2497575/93‑1 (MQ=255)
                                                                       ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt                  >  1:6709473/1‑93 (MQ=255)
                                                                        tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa                 >  1:1707829/1‑93 (MQ=255)
                                                                        tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa                 >  2:25249/1‑93 (MQ=255)
                                                                         cAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAg                <  1:7167893/93‑1 (MQ=255)
                                                                          aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa               <  2:2174457/93‑1 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              <  1:2026019/93‑1 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              >  2:1256431/1‑93 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              <  2:4136163/93‑1 (MQ=255)
                                                                            cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt             <  2:2997359/93‑1 (MQ=255)
                                                                            cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt             <  2:7828515/93‑1 (MQ=255)
                                                                             aTTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATc            >  2:697742/1‑93 (MQ=255)
                                                                                   aaCTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGa      >  2:1791477/1‑93 (MQ=255)
                                                                                   aaCTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGa      >  2:3808542/1‑93 (MQ=255)
                                                                                     cTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGc    <  2:7165256/93‑1 (MQ=255)
                                                                                      tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt   <  2:7785780/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 201 total aligned reads displayed.
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG  >  NC_000913/4414375‑4414560
                                                                                            |                                                                                             
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302543.1063257/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302543.4093063/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302543.3001537/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302543.4432843/94‑1 (MQ=60)
TGGGGGAATGTTCCCGAATTGTAGCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGC                                                                                              <  SRR4302543.4093062/94‑1 (MQ=60)
 GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             <  SRR4302543.2061713/94‑1 (MQ=60)
 GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             <  SRR4302543.6871672/94‑1 (MQ=60)
 GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             >  SRR4302543.6616515/1‑94 (MQ=60)
 GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             >  SRR4302543.4358072/1‑94 (MQ=60)
 GGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCC                                                                                             >  SRR4302543.3661578/1‑94 (MQ=60)
  GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCG                                                                                            <  SRR4302543.1913938/94‑1 (MQ=60)
     GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA                                                                                         <  SRR4302543.2706877/94‑1 (MQ=60)
     GAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCA                                                                                         >  SRR4302543.5918992/1‑94 (MQ=60)
      AATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAG                                                                                        <  SRR4302543.3586535/94‑1 (MQ=60)
      AATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAG                                                                                        >  SRR4302543.5758222/1‑94 (MQ=60)
      AATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAG                                                                                        >  SRR4302543.1053358/1‑94 (MQ=60)
       ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       >  SRR4302543.4935805/1‑94 (MQ=60)
       ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       >  SRR4302543.4021586/1‑94 (MQ=60)
       ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       >  SRR4302543.5674629/1‑94 (MQ=60)
       ATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGC                                                                                       <  SRR4302543.2457450/94‑1 (MQ=60)
        TGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCA                                                                                      >  SRR4302543.545562/1‑94 (MQ=60)
         GTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAG                                                                                     <  SRR4302543.3364805/94‑1 (MQ=60)
           TCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAA                                                                                   >  SRR4302543.3154067/1‑94 (MQ=60)
            CCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAA                                                                                  >  SRR4302543.1006164/1‑94 (MQ=60)
            CCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAA                                                                                  >  SRR4302543.4277001/1‑94 (MQ=60)
             CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTACCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 <  SRR4302543.5245589/94‑1 (MQ=60)
             CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 >  SRR4302543.6397097/1‑94 (MQ=60)
             CCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 >  SRR4302543.6913154/1‑94 (MQ=60)
             CCGAATTGGTGCCTGGTCCGCGATTTGCGAATGAAAACGTGACGAAAGCGTAACCCACATCGCAACATTATGAACTAATGCCGCCAGCAGAAAC                                                                                 <  SRR4302543.6769880/94‑1 (MQ=60)
               GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               >  SRR4302543.2398377/1‑94 (MQ=60)
               GAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTT                                                                               >  SRR4302543.3955626/1‑94 (MQ=60)
                AATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTG                                                                              <  SRR4302543.4962518/94‑1 (MQ=60)
                 ATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGT                                                                             <  SRR4302543.1376519/94‑1 (MQ=60)
                 ATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGT                                                                             <  SRR4302543.7393328/94‑1 (MQ=60)
                  TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAACCTTGTG                                                                            <  SRR4302543.2708743/94‑1 (MQ=60)
                  TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG                                                                            <  SRR4302543.4777924/94‑1 (MQ=60)
                  TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG                                                                            <  SRR4302543.3658280/94‑1 (MQ=60)
                  TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG                                                                            <  SRR4302543.1517293/94‑1 (MQ=60)
                  TTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTG                                                                            >  SRR4302543.751132/1‑94 (MQ=60)
                   TGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGC                                                                           >  SRR4302543.6722114/1‑94 (MQ=60)
                    GTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCT                                                                          >  SRR4302543.4858994/1‑94 (MQ=60)
                    GTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCT                                                                          <  SRR4302543.4657363/94‑1 (MQ=60)
                      TACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAA                                                                        >  SRR4302543.6961708/1‑94 (MQ=60)
                      TACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAA                                                                        <  SRR4302543.1553260/94‑1 (MQ=60)
                       ACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAG                                                                       <  SRR4302543.2561196/94‑1 (MQ=60)
                       ACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAG                                                                       >  SRR4302543.6021383/1‑94 (MQ=60)
                        CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302543.7137719/1‑94 (MQ=60)
                        CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302543.2005036/1‑94 (MQ=60)
                        CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      <  SRR4302543.7243199/94‑1 (MQ=60)
                        CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      <  SRR4302543.500285/94‑1 (MQ=60)
                        CCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGG                                                                      >  SRR4302543.6655442/1‑94 (MQ=60)
                         CTGGTACGCGATTTTCGAATGAAAGCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGA                                                                     <  SRR4302543.2961922/94‑1 (MQ=60)
                         CTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGA                                                                     <  SRR4302543.2285214/94‑1 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    >  SRR4302543.234804/1‑94 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    >  SRR4302543.5379078/1‑94 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    >  SRR4302543.714214/1‑94 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    <  SRR4302543.1258267/94‑1 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    <  SRR4302543.6686814/94‑1 (MQ=60)
                          TGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAT                                                                    <  SRR4302543.2795079/94‑1 (MQ=60)
                           GGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATT                                                                   <  SRR4302543.5669755/94‑1 (MQ=60)
                            GTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTT                                                                  <  SRR4302543.1334313/94‑1 (MQ=60)
                             TACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCACCATTATGAACTAATGCCGCCAGCAGAAACTTTTGCTAAGGATTTT                                                                 >  SRR4302543.1066843/1‑94 (MQ=60)
                              ACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCT                                                                <  SRR4302543.2176170/94‑1 (MQ=60)
                               CGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTT                                                               >  SRR4302543.469828/1‑94 (MQ=60)
                                  GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAGCATTATGAACTAATGCCGCCAGCAGAACCTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302543.884312/94‑1 (MQ=60)
                                  GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            >  SRR4302543.5367775/1‑94 (MQ=60)
                                  GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            >  SRR4302543.7861756/1‑94 (MQ=60)
                                  GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302543.4739815/94‑1 (MQ=60)
                                  GATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCAT                                                            <  SRR4302543.5573557/94‑1 (MQ=60)
                                   ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG                                                           <  SRR4302543.159602/94‑1 (MQ=60)
                                   ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG                                                           <  SRR4302543.823376/94‑1 (MQ=60)
                                   ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG                                                           <  SRR4302543.6393645/94‑1 (MQ=60)
                                   ATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATG                                                           >  SRR4302543.3342054/1‑94 (MQ=60)
                                    TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT                                                          <  SRR4302543.4132847/94‑1 (MQ=60)
                                    TTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGT                                                          >  SRR4302543.5898182/1‑94 (MQ=60)
                                      TTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCA                                                        >  SRR4302543.333606/1‑94 (MQ=60)
                                      TTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCA                                                        <  SRR4302543.5201799/94‑1 (MQ=60)
                                       TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT                                                       <  SRR4302543.4257209/94‑1 (MQ=60)
                                       TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT                                                       <  SRR4302543.4168910/94‑1 (MQ=60)
                                       TCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAT                                                       <  SRR4302543.5125581/94‑1 (MQ=60)
                                        CGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATA                                                      >  SRR4302543.7791271/1‑94 (MQ=60)
                                        CGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATA                                                      >  SRR4302543.3676821/1‑94 (MQ=60)
                                         GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     >  SRR4302543.6507751/1‑94 (MQ=60)
                                         GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     <  SRR4302543.830451/94‑1 (MQ=60)
                                         GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     >  SRR4302543.2819004/1‑94 (MQ=60)
                                         GAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     <  SRR4302543.4240277/94‑1 (MQ=60)
                                         CAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAC                                                     <  SRR4302543.1476395/94‑1 (MQ=60)
                                          AATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACC                                                    >  SRR4302543.6554108/1‑94 (MQ=60)
                                          AATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACC                                                    >  SRR4302543.1492314/1‑94 (MQ=60)
                                           ATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCA                                                   >  SRR4302543.2857534/1‑94 (MQ=60)
                                           ATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCA                                                   >  SRR4302543.2583502/1‑94 (MQ=60)
                                            TGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAG                                                  >  SRR4302543.4789914/1‑94 (MQ=60)
                                            AGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAG                                                  <  SRR4302543.1728251/94‑1 (MQ=60)
                                             GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA                                                 <  SRR4302543.1566579/94‑1 (MQ=60)
                                             GAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGA                                                 <  SRR4302543.5916346/94‑1 (MQ=60)
                                               AAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACA                                               >  SRR4302543.2045676/1‑94 (MQ=60)
                                                AACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAA                                              <  SRR4302543.4107364/94‑1 (MQ=60)
                                                AACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAA                                              >  SRR4302543.509182/1‑94 (MQ=60)
                                                 ACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAA                                             >  SRR4302543.5697038/1‑94 (MQ=60)
                                                  CGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAA                                            <  SRR4302543.6363890/94‑1 (MQ=60)
                                                   GTGACGAAAGCGTAACCCACATCTCAACATTCTGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           >  SRR4302543.7574612/1‑94 (MQ=60)
                                                   GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           <  SRR4302543.5416999/94‑1 (MQ=60)
                                                   GTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAA                                           <  SRR4302543.6616282/94‑1 (MQ=60)
                                                    TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302543.1826981/94‑1 (MQ=60)
                                                    TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302543.3657891/94‑1 (MQ=60)
                                                    TGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          >  SRR4302543.1185141/1‑94 (MQ=60)
                                                    TGACGAAAGCGTAAACCACATCACAACAGTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAG                                          <  SRR4302543.6480083/94‑1 (MQ=60)
                                                     GACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGG                                         <  SRR4302543.2116713/94‑1 (MQ=60)
                                                      ACGAAAGCGTAATCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGA                                        <  SRR4302543.1081992/94‑1 (MQ=60)
                                                       CGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAG                                       >  SRR4302543.4822205/1‑94 (MQ=60)
                                                       CGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAG                                       <  SRR4302543.1692805/94‑1 (MQ=60)
                                                       CGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAG                                       >  SRR4302543.2659237/1‑94 (MQ=60)
                                                       CGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAG                                       <  SRR4302543.3187030/94‑1 (MQ=60)
                                                        GAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGA                                      >  SRR4302543.7140280/1‑94 (MQ=60)
                                                         AAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAG                                     <  SRR4302543.2101722/94‑1 (MQ=60)
                                                         AAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAG                                     >  SRR4302543.7928483/1‑94 (MQ=60)
                                                           AGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC                                   <  SRR4302543.7676289/94‑1 (MQ=60)
                                                           AGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAC                                   >  SRR4302543.4369378/1‑94 (MQ=60)
                                                            GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA                                  <  SRR4302543.3292441/94‑1 (MQ=60)
                                                            GCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACA                                  <  SRR4302543.3292442/94‑1 (MQ=60)
                                                             CGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAG                                 >  SRR4302543.2934193/1‑94 (MQ=60)
                                                             CGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAG                                 >  SRR4302543.5556325/1‑94 (MQ=60)
                                                             CGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAG                                 >  SRR4302543.5556324/1‑94 (MQ=60)
                                                              GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                >  SRR4302543.6624237/1‑94 (MQ=60)
                                                              GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                <  SRR4302543.5391877/94‑1 (MQ=60)
                                                              GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                >  SRR4302543.2913150/1‑94 (MQ=60)
                                                              GTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGA                                >  SRR4302543.2232208/1‑94 (MQ=60)
                                                                AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG                              <  SRR4302543.661847/94‑1 (MQ=60)
                                                                AACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATG                              >  SRR4302543.7522748/1‑94 (MQ=60)
                                                                 ACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGA                             <  SRR4302543.1145929/94‑1 (MQ=60)
                                                                 ACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGA                             <  SRR4302543.5501185/94‑1 (MQ=60)
                                                                 ACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGA                             <  SRR4302543.7182490/94‑1 (MQ=60)
                                                                  ccgcCATCTCAACATTCGGCACTAATTCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATCCCAGAAAAAAAGGAGAGACAGATGAT                            <  SRR4302543.660889/90‑1 (MQ=60)
                                                                  CCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAT                            <  SRR4302543.4982561/94‑1 (MQ=60)
                                                                   CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           >  SRR4302543.5415836/1‑94 (MQ=60)
                                                                   CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           >  SRR4302543.3789430/1‑94 (MQ=60)
                                                                   CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATT                           <  SRR4302543.7167927/94‑1 (MQ=60)
                                                                   CCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATACCTTACCAGACAAAGAGGTGAGACAGATGATT                           >  SRR4302543.6833917/1‑94 (MQ=60)
                                                                    CACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTG                          >  SRR4302543.1506049/1‑94 (MQ=60)
                                                                    CACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTG                          >  SRR4302543.5376032/1‑94 (MQ=60)
                                                                    CACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTG                          <  SRR4302543.3332909/94‑1 (MQ=60)
                                                                    CACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGCGCTACGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTG                          >  SRR4302543.5344916/1‑94 (MQ=60)
                                                                      CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA                        >  SRR4302543.4156714/1‑94 (MQ=60)
                                                                      CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA                        <  SRR4302543.6639155/94‑1 (MQ=60)
                                                                      CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA                        <  SRR4302543.4404376/94‑1 (MQ=60)
                                                                      CATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAAGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAA                        <  SRR4302543.5551845/94‑1 (MQ=60)
                                                                       ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGGTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302543.5186711/1‑94 (MQ=60)
                                                                       ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302543.1673347/1‑94 (MQ=60)
                                                                       ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302543.1786670/1‑94 (MQ=60)
                                                                       ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302543.1744767/1‑94 (MQ=60)
                                                                       ATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAA                       >  SRR4302543.5136838/1‑94 (MQ=60)
                                                                        TCTCAACATTATGAACTAATGCCTCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      >  SRR4302543.531180/1‑94 (MQ=60)
                                                                        TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      <  SRR4302543.2520232/94‑1 (MQ=60)
                                                                        TCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAT                      >  SRR4302543.6772838/1‑94 (MQ=60)
                                                                         CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     <  SRR4302543.1370640/94‑1 (MQ=60)
                                                                         CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     >  SRR4302543.1723114/1‑94 (MQ=60)
                                                                         CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     <  SRR4302543.6819771/94‑1 (MQ=60)
                                                                         CTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATA                     >  SRR4302543.4733678/1‑94 (MQ=60)
                                                                          TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    <  SRR4302543.6513705/94‑1 (MQ=60)
                                                                          TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    <  SRR4302543.2151330/94‑1 (MQ=60)
                                                                          TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    <  SRR4302543.7320562/94‑1 (MQ=60)
                                                                          TCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAG                    <  SRR4302543.4482249/94‑1 (MQ=60)
                                                                           CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGATGGACAGATGATTGAAATAGA                   >  SRR4302543.685825/1‑94 (MQ=60)
                                                                           CAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGA                   <  SRR4302543.7237508/94‑1 (MQ=60)
                                                                            AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA                  >  SRR4302543.1994257/1‑94 (MQ=60)
                                                                            AACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAA                  <  SRR4302543.2877943/94‑1 (MQ=60)
                                                                             ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 >  SRR4302543.924346/1‑94 (MQ=60)
                                                                             ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 >  SRR4302543.3606746/1‑94 (MQ=60)
                                                                             ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 <  SRR4302543.7332745/94‑1 (MQ=60)
                                                                             ACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAT                 <  SRR4302543.2044226/94‑1 (MQ=60)
                                                                              CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC                <  SRR4302543.573000/94‑1 (MQ=60)
                                                                              CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC                <  SRR4302543.240902/94‑1 (MQ=60)
                                                                              CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC                <  SRR4302543.1073074/94‑1 (MQ=60)
                                                                              CATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATC                >  SRR4302543.4751768/1‑94 (MQ=60)
                                                                               ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               <  SRR4302543.6178986/94‑1 (MQ=60)
                                                                               ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCA               >  SRR4302543.750410/1‑94 (MQ=60)
                                                                               ATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATAA               >  SRR4302543.6756529/1‑94 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.3971441/94‑1 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.2243387/94‑1 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              >  SRR4302543.3715984/1‑94 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.5497941/94‑1 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.450942/94‑1 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.4655893/94‑1 (MQ=60)
                                                                                TTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAC              <  SRR4302543.3316334/94‑1 (MQ=60)
                                                                                 TATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACG             >  SRR4302543.1183140/1‑94 (MQ=60)
                                                                                      ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC        <  SRR4302543.5120630/94‑1 (MQ=60)
                                                                                      ACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGC        <  SRR4302543.6398147/94‑1 (MQ=60)
                                                                                       CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGCGCT       >  SRR4302543.2081465/1‑94 (MQ=60)
                                                                                       CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       >  SRR4302543.6310428/1‑94 (MQ=60)
                                                                                       CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       >  SRR4302543.7930739/1‑94 (MQ=60)
                                                                                       CTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCT       >  SRR4302543.4092666/1‑94 (MQ=60)
                                                                                        TAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG      <  SRR4302543.5000527/94‑1 (MQ=60)
                                                                                        TAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG      <  SRR4302543.7960992/94‑1 (MQ=60)
                                                                                         AATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGG     <  SRR4302543.1417132/94‑1 (MQ=60)
                                                                                         AATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTAATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGG     <  SRR4302543.3969499/94‑1 (MQ=60)
                                                                                          ATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGC    >  SRR4302543.6663725/1‑94 (MQ=60)
                                                                                           TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA   <  SRR4302543.2225885/94‑1 (MQ=60)
                                                                                           TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA   <  SRR4302543.6888110/94‑1 (MQ=60)
                                                                                           TGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCA   <  SRR4302543.7160628/94‑1 (MQ=60)
                                                                                            GCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG  <  SRR4302543.303882/94‑1 (MQ=60)
                                                                                            |                                                                                             
TGGGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTGGCAG  >  NC_000913/4414375‑4414560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑