Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,415,130	C→T	P201S (CCT→TCT)	yjfP →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,415,130	0	C	T	99.2%	1280.6 / ‑4.1	361	P201S (CCT→TCT)	yjfP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (185/173); total (187/174)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01

Only 100 of 395 total aligned reads displayed.

CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGT  >  NC_000913/4415040‑4415219

ccACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtct                                                                                         >  2:442005/1‑93 (MQ=255)

 cACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctg                                                                                        >  1:4510656/1‑93 (MQ=255)

  aCTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgc                                                                                       >  2:6078842/1‑93 (MQ=255)

  aCTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgc                                                                                       <  2:4365068/93‑1 (MQ=255)

  aCTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgc                                                                                       <  2:3922738/93‑1 (MQ=255)

   cTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgcc                                                                                      >  2:1396360/1‑93 (MQ=255)

   cTGGCAGAGTGGGAAGCGACAAACCACCAGGAACAACTTAGTGACAGTCCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgcc                                                                                      <  1:1877292/93‑1 (MQ=255)

    tGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcg                                                                                     <  1:1052121/93‑1 (MQ=255)

     ggCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcga                                                                                    <  2:3480272/93‑1 (MQ=255)

     ggCAGAGGGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcga                                                                                    <  2:1737851/93‑1 (MQ=255)

      gCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcgac                                                                                   >  1:5792464/1‑93 (MQ=255)

      gCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcgac                                                                                   <  1:3050284/93‑1 (MQ=255)

         gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa                                                                                >  1:4441882/1‑93 (MQ=255)

         gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa                                                                                >  1:6527124/1‑93 (MQ=255)

         gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa                                                                                <  1:703919/93‑1 (MQ=255)

         gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa                                                                                >  2:495477/1‑93 (MQ=255)

           gTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATc                                                                              >  2:1963205/1‑93 (MQ=255)

           gTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATc                                                                              >  1:5012692/1‑93 (MQ=255)

            tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa                                                                             >  2:1524446/1‑93 (MQ=255)

            tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa                                                                             >  2:2438024/1‑93 (MQ=255)

            tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa                                                                             >  2:2926273/1‑93 (MQ=255)

            tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa                                                                             >  1:1261051/1‑93 (MQ=255)

             gggAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCAc                                                                            >  2:2554140/1‑93 (MQ=255)

              ggAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACt                                                                           <  1:4232111/93‑1 (MQ=255)

               gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa                                                                          <  2:911954/93‑1 (MQ=255)

               gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa                                                                          <  2:2163727/93‑1 (MQ=255)

               gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa                                                                          <  1:7699618/93‑1 (MQ=255)

                 aGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACg                                                                        >  2:3682826/1‑93 (MQ=255)

                   cGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGtt                                                                      <  1:6395905/93‑1 (MQ=255)

                      cAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgc                                                                   <  2:7351199/93‑1 (MQ=255)

                       aaaCCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgca                                                                  <  1:6634365/93‑1 (MQ=255)

                          ccaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcagca                                                               <  1:255546/93‑1 (MQ=255)

                            cccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg                                                             <  2:2292277/92‑1 (MQ=255)

                            cccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg                                                             <  2:3828136/92‑1 (MQ=255)

                            accTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg                                                             >  2:2820530/1‑93 (MQ=255)

                            accTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg                                                             >  2:3388252/1‑93 (MQ=255)

                             ccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTGGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGc                                                            <  2:2205286/93‑1 (MQ=255)

                               tGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCt                                                          <  1:7584285/93‑1 (MQ=255)

                                ggAACAACTTGGTGACAGACCTCTACTGCTGTGGCATGGACTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCCGGCCtt                                                         >  2:6423425/1‑93 (MQ=255)

                                ggAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCtt                                                         <  2:3016126/93‑1 (MQ=255)

                                  aacaacGTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTaa                                                       <  1:3776031/93‑1 (MQ=255)

                                   acaacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGCGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAg                                                      <  1:1593969/93‑1 (MQ=255)

                                     aacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCg                                                    >  1:2365370/1‑93 (MQ=255)

                                            tGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTATGTTTGCAGCAGGCCTTAAgcggggcggg                                             >  2:1596764/1‑93 (MQ=255)

                                            tGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggg                                             >  2:7076647/1‑93 (MQ=255)

                                             gACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggga                                            <  2:7524034/93‑1 (MQ=255)

                                             gACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggga                                            <  2:4603529/93‑1 (MQ=255)

                                             gACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggga                                            <  2:5348556/93‑1 (MQ=255)

                                              aCAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacgggac                                           <  2:2673982/93‑1 (MQ=255)

                                                  aCCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAcgggacggga                                       <  1:7289453/93‑1 (MQ=255)

                                                   ccTCTACTGCTGTGGCATGGCCTCGACTATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAt                                      <  1:4100754/93‑1 (MQ=255)

                                                    ctctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATa                                     <  2:4028730/93‑1 (MQ=255)

                                                    ctctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATa                                     <  2:4709495/93‑1 (MQ=255)

                                                    ctctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATa                                     >  1:5850871/1‑93 (MQ=255)

                                                     tctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaa                                    >  2:1086930/1‑93 (MQ=255)

                                                     tctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaa                                    >  1:2628925/1‑93 (MQ=255)

                                                     tctACTGCTGTGGCATGGCCTCGACGATGAAGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaa                                    >  1:5335464/1‑93 (MQ=255)

                                                      ctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTGTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaaa                                   >  1:6177492/1‑93 (MQ=255)

                                                      ctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaaa                                   <  1:2748042/93‑1 (MQ=255)

                                                       tACTGTTGTGGCATGGCTTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc                                  <  2:2032347/93‑1 (MQ=255)

                                                       tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc                                  >  1:5591276/1‑93 (MQ=255)

                                                       tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc                                  >  2:5698486/1‑93 (MQ=255)

                                                       tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc                                  >  1:7827154/1‑93 (MQ=255)

                                                       tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc                                  >  2:181662/1‑93 (MQ=255)

                                                         ctgctgTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTg                                >  1:4843144/1‑93 (MQ=255)

                                                         ctgctgTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTg                                >  1:3306653/1‑93 (MQ=255)

                                                          tgctgTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGc                               >  2:7787651/1‑93 (MQ=255)

                                                           gctgTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCt                              >  2:651303/1‑93 (MQ=255)

                                                              gtgGCATGGCATAGAAGATGACGTTGTGTCTGCCGACGAATCACTACATTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAAc                           <  2:7014072/93‑1 (MQ=255)

                                                               tgGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAAcc                          >  1:1684566/1‑93 (MQ=255)

                                                                ggCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAActt                         >  1:1431962/1‑91 (MQ=255)

                                                                ggCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCt                         <  1:3477605/93‑1 (MQ=255)

                                                                ggCATGGCCTCGAAGATGACGTTGTGTCTGCCGACGAATTACTACGTTTGCAACAGGCCTTAAGCGAGACGGGGCGGGATAAAGCGCTCACCt                         >  2:342095/1‑93 (MQ=255)

                                                                 gCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGTATCAGGCCTTAAGCGAAACGGGACGGGATAAACTGCTAACTTg                        >  2:6738193/1‑93 (MQ=255)

                                                                 gCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTg                        <  1:3157868/93‑1 (MQ=255)

                                                                 gCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTg                        >  1:4588319/1‑93 (MQ=255)

                                                                 gCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTg                        >  1:4668027/1‑93 (MQ=255)

                                                                    tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc                     >  2:7123645/1‑93 (MQ=255)

                                                                    tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc                     >  1:4019105/1‑93 (MQ=255)

                                                                    tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc                     >  1:6775863/1‑93 (MQ=255)

                                                                    tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc                     >  2:5833930/1‑93 (MQ=255)

                                                                     ggCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCa                    <  1:2224749/93‑1 (MQ=255)

                                                                     ggCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCa                    <  1:5167874/93‑1 (MQ=255)

                                                                      gCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCAt                   >  2:4860602/1‑93 (MQ=255)

                                                                          cgacgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGTTCATGGCa               <  2:5942684/93‑1 (MQ=255)

                                                                          cgacgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCa               <  2:5460271/93‑1 (MQ=255)

                                                                            acgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGc             <  1:2067362/93‑1 (MQ=255)

                                                                            acgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGc             >  1:2164946/1‑93 (MQ=255)

                                                                             cgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGcc            <  2:447007/93‑1 (MQ=255)

                                                                              gaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGccc           >  1:815963/1‑92 (MQ=255)

                                                                              gaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCa           <  2:2534441/93‑1 (MQ=255)

                                                                               aTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAg          <  2:7678210/93‑1 (MQ=255)

                                                                               aTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAg          <  1:3586943/93‑1 (MQ=255)

                                                                                 gaggTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgc        <  2:6913820/90‑1 (MQ=255)

                                                                                 gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGTTCATGGCAGCCAGgc        >  1:6755730/1‑93 (MQ=255)

                                                                                 gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCCGCCAGgc        >  1:4303765/1‑93 (MQ=255)

                                                                                 gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAggg        >  2:4679893/1‑92 (MQ=255)

                                                                                 gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgc        >  1:2950829/1‑93 (MQ=255)

                                                                                 gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgc        >  2:3281373/1‑93 (MQ=255)

                                                                                  aCGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcg       <  1:5938557/93‑1 (MQ=255)

CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGT  >  NC_000913/4415040‑4415219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  >  NC_000913/4415037‑4415223

GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGT                                                                                               <  SRR4302543.4930325/94‑1 (MQ=60)

 CGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTC                                                                                              <  SRR4302543.6479390/94‑1 (MQ=60)

  GCGACTGGTAGAGTGCGAAGCGACAAACCAGCTGGAACATCTTAGTGACAGACCTCTACTGGTGTTGCATGGCCTCGACGATGACGTTGTGTCT                                                                                             <  SRR4302543.1886691/94‑1 (MQ=60)

  GCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCT                                                                                             <  SRR4302543.7177475/94‑1 (MQ=60)

   CCAGTGGCAGAGTGGGAAGCGACAAACCGCCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTG                                                                                            <  SRR4302543.2763505/94‑1 (MQ=60)

   CCACTGGNAGAGTGGGAAGCGNCAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTG                                                                                            <  SRR4302543.4757142/94‑1 (MQ=60)

   CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTG                                                                                            >  SRR4302543.3307147/1‑94 (MQ=60)

   CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTG                                                                                            <  SRR4302543.2763504/94‑1 (MQ=60)

   CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTG                                                                                            >  SRR4302543.4551676/1‑94 (MQ=60)

    CACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGC                                                                                           >  SRR4302543.6535619/1‑94 (MQ=60)

    CACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGC                                                                                           >  SRR4302543.4562184/1‑94 (MQ=60)

     ACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCC                                                                                          <  SRR4302543.1306568/94‑1 (MQ=60)

     ACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCC                                                                                          <  SRR4302543.1416610/94‑1 (MQ=60)

     ACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCC                                                                                          >  SRR4302543.7800118/1‑94 (MQ=60)

      CTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCG                                                                                         <  SRR4302543.265011/94‑1 (MQ=60)

      CTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCG                                                                                         <  SRR4302543.821012/94‑1 (MQ=60)

      CTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCG                                                                                         >  SRR4302543.7981557/1‑94 (MQ=60)

      CTGGCAGAGTGGGAAGCGACAAACCACCAGGAACAACTTAGTGACAGTCCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCG                                                                                         <  SRR4302543.1894159/94‑1 (MQ=60)

       TGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGA                                                                                        <  SRR4302543.1061542/94‑1 (MQ=60)

        GGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGAC                                                                                       >  SRR4302543.5845158/1‑94 (MQ=60)

        GGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGAC                                                                                       >  SRR4302543.791866/1‑94 (MQ=60)

         GCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACG                                                                                      <  SRR4302543.3077767/94‑1 (MQ=60)

         GCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACG                                                                                      <  SRR4302543.1571798/94‑1 (MQ=60)

           AGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAA                                                                                    >  SRR4302543.6588586/1‑94 (MQ=60)

           AGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAA                                                                                    >  SRR4302543.4482102/1‑94 (MQ=60)

           AGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAA                                                                                    <  SRR4302543.7478785/94‑1 (MQ=60)

            GAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAAT                                                                                   >  SRR4302543.3570559/1‑94 (MQ=60)

            GAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAAT                                                                                   <  SRR4302543.710336/94‑1 (MQ=60)

            GAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAAT                                                                                   >  SRR4302543.5094276/1‑94 (MQ=60)

             AGTGGGAAGCGACAAACCGCCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATA                                                                                  >  SRR4302543.2222788/1‑94 (MQ=60)

             AGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATC                                                                                  >  SRR4302543.2090980/1‑94 (MQ=60)

             AGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATC                                                                                  >  SRR4302543.4084216/1‑94 (MQ=60)

             AGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATC                                                                                  >  SRR4302543.5058313/1‑94 (MQ=60)

             AGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATC                                                                                  <  SRR4302543.6273854/94‑1 (MQ=60)

              GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA                                                                                 >  SRR4302543.5849471/1‑94 (MQ=60)

              GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA                                                                                 >  SRR4302543.1272332/1‑94 (MQ=60)

               TGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCAC                                                                                >  SRR4302543.7568349/1‑94 (MQ=60)

                GGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACT                                                                               <  SRR4302543.4284005/94‑1 (MQ=60)

                 GGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTA                                                                              <  SRR4302543.4270500/94‑1 (MQ=60)

                 GGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTA                                                                              >  SRR4302543.7661678/1‑94 (MQ=60)

                  GAAGCGACAACCCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAC                                                                             <  SRR4302543.1535185/94‑1 (MQ=60)

                  GAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAC                                                                             <  SRR4302543.7772492/94‑1 (MQ=60)

                   AAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACG                                                                            <  SRR4302543.4934415/94‑1 (MQ=60)

                     GCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTT                                                                          <  SRR4302543.5195128/94‑1 (MQ=60)

                      CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT                                                                         >  SRR4302543.4416500/1‑94 (MQ=60)

                      CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT                                                                         >  SRR4302543.1683142/1‑94 (MQ=60)

                      CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT                                                                         >  SRR4302543.6212616/1‑94 (MQ=60)

                      CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT                                                                         <  SRR4302543.6456115/94‑1 (MQ=60)

                       GACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTG                                                                        <  SRR4302543.6571020/94‑1 (MQ=60)

                       GACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTG                                                                        >  SRR4302543.1110123/1‑94 (MQ=60)

                       GACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTG                                                                        >  SRR4302543.4929353/1‑94 (MQ=60)

                       GACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTG                                                                        >  SRR4302543.4929354/1‑94 (MQ=60)

                        ACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGC                                                                       >  SRR4302543.4676899/1‑94 (MQ=60)

                         CAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCA                                                                      >  SRR4302543.3478432/1‑94 (MQ=60)

                         CAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCA                                                                      >  SRR4302543.1752327/1‑94 (MQ=60)

                          AAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAG                                                                     <  SRR4302543.6696965/94‑1 (MQ=60)

                           AACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGC                                                                    <  SRR4302543.4205196/94‑1 (MQ=60)

                            ACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCA                                                                   >  SRR4302543.3016474/1‑94 (MQ=60)

                             CCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAG                                                                  <  SRR4302543.257775/94‑1 (MQ=60)

                              CACCTGGAACAACTTAGTGACAGGCCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG                                                                 <  SRR4302543.1626567/94‑1 (MQ=60)

                              CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG                                                                 >  SRR4302543.4674416/1‑94 (MQ=60)

                              CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG                                                                 >  SRR4302543.2592195/1‑94 (MQ=60)

                              CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG                                                                 >  SRR4302543.6806551/1‑94 (MQ=60)

                               CCCTGGAACAACTTAGTGACAGTCCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGC                                                                <  SRR4302543.6843690/94‑1 (MQ=60)

                               CCCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGC                                                                <  SRR4302543.275770/94‑1 (MQ=60)

                               ACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGC                                                                >  SRR4302543.6527704/1‑94 (MQ=60)

                                CCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCC                                                               >  SRR4302543.297080/1‑94 (MQ=60)

                                CCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCC                                                               >  SRR4302543.5939610/1‑94 (MQ=60)

                                CCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCC                                                               >  SRR4302543.5939609/1‑94 (MQ=60)

                                CCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGGTTGCAGCAGGCC                                                               >  SRR4302543.4541838/1‑94 (MQ=60)

                                  TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT                                                             <  SRR4302543.7656367/94‑1 (MQ=60)

                                  TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT                                                             >  SRR4302543.2169213/1‑94 (MQ=60)

                                  TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT                                                             >  SRR4302543.6767783/1‑94 (MQ=60)

                                  TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT                                                             >  SRR4302543.306827/1‑94 (MQ=60)

                                  TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT                                                             >  SRR4302543.6767782/1‑94 (MQ=60)

                                    GAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAA                                                           >  SRR4302543.7755771/1‑94 (MQ=60)

                                    GAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAA                                                           <  SRR4302543.2289096/94‑1 (MQ=60)

                                    GAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAA                                                           >  SRR4302543.1857255/1‑94 (MQ=60)

                                     AACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG                                                          <  SRR4302543.3522554/94‑1 (MQ=60)

                                     AACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG                                                          <  SRR4302543.429551/94‑1 (MQ=60)

                                     AACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCCGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG                                                          <  SRR4302543.701672/94‑1 (MQ=60)

                                     AACAACGTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG                                                          <  SRR4302543.3809282/94‑1 (MQ=60)

                                      ACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGCGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGC                                                         <  SRR4302543.1608193/94‑1 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.3399632/1‑94 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.3224049/1‑94 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.3173785/1‑94 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.2386821/1‑94 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.509014/1‑94 (MQ=60)

                                       CAACTTAGTGACAGACCTCTACTACTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG                                                        >  SRR4302543.3066348/1‑94 (MQ=60)

                                        AACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGA                                                       <  SRR4302543.4653773/94‑1 (MQ=60)

                                        AACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGA                                                       >  SRR4302543.5470459/1‑94 (MQ=60)

                                         ACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAG                                                      >  SRR4302543.2149729/1‑94 (MQ=60)

                                          CTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATGCCTACGTTTGCAGCACGCCTTAAGCGAGA                                                     >  SRR4302543.3753340/1‑94 (MQ=60)

                                          CTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGC                                                     >  SRR4302543.3538521/1‑94 (MQ=60)

                                          CTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGA                                                     >  SRR4302543.5346830/1‑94 (MQ=60)

                                          CTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGA                                                     >  SRR4302543.5860041/1‑94 (MQ=60)

                                           TTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAC                                                    <  SRR4302543.4329014/94‑1 (MQ=60)

                                           TTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAC                                                    <  SRR4302543.5766739/94‑1 (MQ=60)

                                           TTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAC                                                    >  SRR4302543.5976582/1‑94 (MQ=60)

                                              GTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGG                                                 <  SRR4302543.5619130/94‑1 (MQ=60)

                                               GGACAGACCTCGAGTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGA                                                <  SRR4302543.3874819/94‑1 (MQ=60)

                                                GACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGAC                                               <  SRR4302543.171463/94‑1 (MQ=60)

                                                 ACGGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG                                              >  SRR4302543.4488331/1‑94 (MQ=60)

                                                 ACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG                                              <  SRR4302543.1494708/94‑1 (MQ=60)

                                                 ACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG                                              <  SRR4302543.126336/94‑1 (MQ=60)

                                                   AGGCCTCTACAGCGGGGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCGCTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGG                                            <  SRR4302543.3219254/94‑1 (MQ=60)

                                                   AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGG                                            >  SRR4302543.3663989/1‑94 (MQ=60)

                                                   AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGG                                            <  SRR4302543.4461300/94‑1 (MQ=60)

                                                    GACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGA                                           <  SRR4302543.1281898/94‑1 (MQ=60)

                                                    GACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGA                                           >  SRR4302543.2227628/1‑94 (MQ=60)

                                                     ACCTCTNCTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAT                                          <  SRR4302543.4750947/94‑1 (MQ=60)

                                                     ACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAT                                          <  SRR4302543.4747456/94‑1 (MQ=60)

                                                     ACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAT                                          <  SRR4302543.7359815/94‑1 (MQ=60)

                                                     ACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAT                                          <  SRR4302543.7661623/94‑1 (MQ=60)

                                                      CCTCTACTGCTGTGGCATGGCCTCGACTATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA                                         <  SRR4302543.4137613/94‑1 (MQ=60)

                                                      CCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA                                         >  SRR4302543.2811105/1‑94 (MQ=60)

                                                      CCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA                                         >  SRR4302543.71439/1‑94 (MQ=60)

                                                      CCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA                                         >  SRR4302543.4243427/1‑94 (MQ=60)

                                                      CCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA                                         >  SRR4302543.5904112/1‑94 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        >  SRR4302543.2269047/1‑94 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        >  SRR4302543.2652717/1‑94 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        >  SRR4302543.2203703/1‑94 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        <  SRR4302543.4535142/94‑1 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        <  SRR4302543.3948742/94‑1 (MQ=60)

                                                       CTCTACTGCTGTGGCATGGCCTCGACGATGAAGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAA                                        >  SRR4302543.5383717/1‑94 (MQ=60)

                                                        TCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTGTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAA                                       >  SRR4302543.6235897/1‑94 (MQ=60)

                                                        TCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAC                                       >  SRR4302543.3476560/1‑94 (MQ=60)

                                                        TCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAA                                       >  SRR4302543.5360393/1‑94 (MQ=60)

                                                         CTACTGCTGTGGGATGCCCTCGATGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCATCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.7157286/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.7157287/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      >  SRR4302543.7900868/1‑94 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.7824543/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.1902404/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.2479885/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      <  SRR4302543.2773028/94‑1 (MQ=60)

                                                         CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC                                      >  SRR4302543.5642210/1‑94 (MQ=60)

                                                          TACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACT                                     >  SRR4302543.1899035/1‑94 (MQ=60)

                                                           ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG                                    >  SRR4302543.3336494/1‑94 (MQ=60)

                                                           ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG                                    <  SRR4302543.6660504/94‑1 (MQ=60)

                                                           ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG                                    >  SRR4302543.2583721/1‑94 (MQ=60)

                                                           ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG                                    >  SRR4302543.4887302/1‑94 (MQ=60)

                                                           ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG                                    <  SRR4302543.4039447/94‑1 (MQ=60)

                                                            CTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGC                                   <  SRR4302543.6279666/94‑1 (MQ=60)

                                                            CTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGC                                   >  SRR4302543.7841331/1‑94 (MQ=60)

                                                            CTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGC                                   >  SRR4302543.88846/1‑94 (MQ=60)

                                                             TGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCT                                  >  SRR4302543.5456974/1‑94 (MQ=60)

                                                                 GTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACC                              >  SRR4302543.1699697/1‑94 (MQ=60)

                                                                  TGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGTACGGGATAAACTGCTAACCT                             <  SRR4302543.6692332/94‑1 (MQ=60)

                                                                  TGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTT                             >  SRR4302543.1444912/1‑94 (MQ=60)

                                                                   GGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTG                            >  SRR4302543.4629996/1‑94 (MQ=60)

                                                                   GGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTG                            <  SRR4302543.3508755/94‑1 (MQ=60)

                                                                   GGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTG                            >  SRR4302543.4710571/1‑94 (MQ=60)

                                                                    GCATGTCCTCGACGATGACGTGGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGT                           <  SRR4302543.3186294/94‑1 (MQ=60)

                                                                    GCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGT                           <  SRR4302543.3186295/94‑1 (MQ=60)

                                                                    GCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGT                           <  SRR4302543.2477957/94‑1 (MQ=60)

                                                                      ATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGCCGGGATAAACTGCTAACCTGTTC                         >  SRR4302543.4156636/1‑94 (MQ=60)

                                                                      ATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGTTC                         >  SRR4302543.2858740/1‑94 (MQ=60)

                                                                      ATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTC                         >  SRR4302543.6839868/1‑94 (MQ=60)

                                                                      ATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTC                         >  SRR4302543.4054999/1‑94 (MQ=60)

                                                                        GGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCAT                       <  SRR4302543.2244830/94‑1 (MQ=60)

                                                                        GGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCAT                       <  SRR4302543.5214560/94‑1 (MQ=60)

                                                                        GGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCAT                       <  SRR4302543.3665661/94‑1 (MQ=60)

                                                                         GCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATG                      <  SRR4302543.5666885/94‑1 (MQ=60)

                                                                          CCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGTTAAACTGCTCACCTGTTCAGGG                     >  SRR4302543.406521/1‑94 (MQ=60)

                                                                          CCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGG                     <  SRR4302543.6196845/94‑1 (MQ=60)

                                                                          CCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGG                     <  SRR4302543.2424639/94‑1 (MQ=60)

                                                                          CCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGG                     <  SRR4302543.6819936/94‑1 (MQ=60)

                                                                           CTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTAATGGC                    >  SRR4302543.5699979/1‑94 (MQ=60)

                                                                            TCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCA                   <  SRR4302543.637377/94‑1 (MQ=60)

                                                                              GACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGC                 >  SRR4302543.2184344/1‑94 (MQ=60)

                                                                               ACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCC                <  SRR4302543.2085845/94‑1 (MQ=60)

                                                                                CGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCC               >  SRR4302543.823145/1‑94 (MQ=60)

                                                                                CGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCA               >  SRR4302543.3169230/1‑94 (MQ=60)

                                                                                 GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAG              <  SRR4302543.2383490/94‑1 (MQ=60)

                                                                                  ATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGTTCATGGCAGCCAGG             <  SRR4302543.6955220/94‑1 (MQ=60)

                                                                                  ATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGG             <  SRR4302543.3618619/94‑1 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACTTGTTCATGGCAGCCAGGC            >  SRR4302543.6819533/1‑94 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCCGCCAGGC            >  SRR4302543.4342863/1‑94 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGG            >  SRR4302543.589326/1‑94 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGC            >  SRR4302543.2977619/1‑94 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGC            >  SRR4302543.4342864/1‑94 (MQ=60)

                                                                                   TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGC            <  SRR4302543.4569748/94‑1 (MQ=60)

                                                                                    GACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCG           <  SRR4302543.7364254/94‑1 (MQ=60)

                                                                                     ACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGT          <  SRR4302543.5992892/94‑1 (MQ=60)

                                                                                       GTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGC        >  SRR4302543.5382473/1‑94 (MQ=60)

                                                                                       GTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGC        >  SRR4302543.1971418/1‑94 (MQ=60)

                                                                                       GTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGC        <  SRR4302543.683262/94‑1 (MQ=60)

                                                                                        TTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCG       <  SRR4302543.6092266/94‑1 (MQ=60)

                                                                                        TTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCG       <  SRR4302543.6686261/94‑1 (MQ=60)

                                                                                         TGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGT      <  SRR4302543.1694026/94‑1 (MQ=60)

                                                                                          GTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGGGTGCGTC     >  SRR4302543.3270905/1‑94 (MQ=60)

                                                                                           TGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCA    <  SRR4302543.6322551/94‑1 (MQ=60)

                                                                                            GTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCAC   <  SRR4302543.250927/94‑1 (MQ=60)

                                                                                             TCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  <  SRR4302543.1518700/94‑1 (MQ=60)

                                                                                             TCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  >  SRR4302543.6033073/1‑94 (MQ=60)

                                                                                             TCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  <  SRR4302543.6975827/94‑1 (MQ=60)

                                                                                             GCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  <  SRR4302543.7822842/94‑1 (MQ=60)

GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACC  >  NC_000913/4415037‑4415223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`