Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,422,211 T→C A53A (GCA→GCG)  yjfY ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,422,2110TC99.8% 1247.8 / ‑5.4 398A53A (GCA→GCG) yjfYhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (193/204);  total (193/205)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01

Only 100 of 409 total aligned reads displayed.

CATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAT  >  NC_000913/4422121‑4422300
                                                                                          |                                                                                         
  tatTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCtt                                                                                       >  1:4263063/1‑93 (MQ=255)
  tatTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCtt                                                                                       >  2:4409427/1‑93 (MQ=255)
  tatTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCtt                                                                                       >  1:705076/1‑93 (MQ=255)
   atTGCCGTTACTCCCCGGTTCCCTCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTc                                                                                      <  2:4295236/93‑1 (MQ=255)
    ttGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCg                                                                                     >  1:1857976/1‑93 (MQ=255)
     tGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGc                                                                                    >  1:5310161/1‑93 (MQ=255)
      gCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCt                                                                                   <  2:4922485/93‑1 (MQ=255)
        cGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCttt                                                                                 <  1:3376534/93‑1 (MQ=255)
        cGTTACTCCCCGGTCCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCttt                                                                                 <  2:6024769/93‑1 (MQ=255)
         gTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTc                                                                                <  1:4524571/93‑1 (MQ=255)
           tACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAg                                                                              <  2:5333463/93‑1 (MQ=255)
           tACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAg                                                                              <  2:2112868/93‑1 (MQ=255)
           tACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAg                                                                              >  1:1407946/1‑93 (MQ=255)
           tACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCACCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAg                                                                              <  2:7016673/93‑1 (MQ=255)
            aCTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGt                                                                             >  2:1202164/1‑93 (MQ=255)
            aCTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGt                                                                             <  2:3444531/93‑1 (MQ=255)
               ccccGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGc                                                                          <  1:2522654/93‑1 (MQ=255)
               ccccGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGc                                                                          <  2:5581935/93‑1 (MQ=255)
                cccGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCg                                                                         >  2:1475633/1‑93 (MQ=255)
                   ggTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGaaa                                                                      <  2:3945173/93‑1 (MQ=255)
                   ggTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGaaa                                                                      <  1:352619/93‑1 (MQ=255)
                   ggTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGaaa                                                                      <  2:6538376/93‑1 (MQ=255)
                     ttCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAAtt                                                                    >  1:2199512/1‑93 (MQ=255)
                      tCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTa                                                                   >  1:2701064/1‑93 (MQ=255)
                      tCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAAATa                                                                   <  1:1336052/93‑1 (MQ=255)
                       cccGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAt                                                                  <  1:6239831/93‑1 (MQ=255)
                        ccGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtg                                                                 >  1:5470272/1‑93 (MQ=255)
                        ccGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtg                                                                 >  1:2941351/1‑93 (MQ=255)
                          gCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgat                                                               >  2:7574263/1‑93 (MQ=255)
                            aTCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgattg                                                             <  2:866032/93‑1 (MQ=255)
                            aTCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgattg                                                             <  1:1144842/93‑1 (MQ=255)
                             tCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgattga                                                            >  2:5034447/1‑93 (MQ=255)
                             tCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgattga                                                            >  1:179332/1‑93 (MQ=255)
                              cAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAtgattgat                                                           <  2:6920258/93‑1 (MQ=255)
                                gAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGatat                                                         <  1:1042151/93‑1 (MQ=255)
                                gAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGACTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGatat                                                         >  1:4087340/1‑93 (MQ=255)
                                  aTTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATaa                                                       >  1:4039919/1‑93 (MQ=255)
                                   ttACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATaaa                                                      >  1:3249799/1‑93 (MQ=255)
                                   ttACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATaaa                                                      <  1:7540394/93‑1 (MQ=255)
                                    tACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt                                                     <  2:3702572/93‑1 (MQ=255)
                                    tACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAt                                                     <  2:1654286/93‑1 (MQ=255)
                                     aCGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATc                                                    <  1:6593870/93‑1 (MQ=255)
                                     aCGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATc                                                    <  2:7776192/93‑1 (MQ=255)
                                       gTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCAc                                                  <  1:6466194/93‑1 (MQ=255)
                                        tGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACg                                                 <  2:1094835/93‑1 (MQ=255)
                                         ggTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGc                                                >  1:4609218/1‑93 (MQ=255)
                                         ggTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGc                                                <  1:2453784/93‑1 (MQ=255)
                                           tagtaCGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCt                                              <  1:5666580/93‑1 (MQ=255)
                                             gtaCGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTaa                                            <  2:3503003/93‑1 (MQ=255)
                                                 gTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCtt                                        <  2:6859393/93‑1 (MQ=255)
                                                  ttGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCttt                                       >  1:3050396/1‑93 (MQ=255)
                                                   tGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTg                                      <  1:6354881/93‑1 (MQ=255)
                                                    gcgcCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGc                                     <  1:942754/93‑1 (MQ=255)
                                                     cgcCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGca                                    >  1:6995114/1‑93 (MQ=255)
                                                       ccTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGcaca                                  <  2:2791204/93‑1 (MQ=255)
                                                         ttGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATc                                >  2:4693309/1‑93 (MQ=255)
                                                         ttGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATc                                >  2:1985821/1‑93 (MQ=255)
                                                         ttGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATc                                >  2:2231973/1‑93 (MQ=255)
                                                         ttGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATc                                >  2:5889440/1‑93 (MQ=255)
                                                          tGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCg                               >  1:6865226/1‑93 (MQ=255)
                                                           gcgcATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGt                              >  2:7462079/1‑93 (MQ=255)
                                                             gcATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTcc                            >  2:5191492/1‑93 (MQ=255)
                                                             gcATCTGTTTCTTCATTTAATGCCTGACGCGCTGCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTcc                            <  1:7632720/93‑1 (MQ=255)
                                                                tCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCata                         >  1:3778112/1‑93 (MQ=255)
                                                                tCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCata                         >  2:1356812/1‑93 (MQ=255)
                                                                tCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCata                         <  1:4891522/93‑1 (MQ=255)
                                                                 cTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCatat                        <  2:6378764/93‑1 (MQ=255)
                                                                 cTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCatat                        >  1:1573599/1‑93 (MQ=255)
                                                                   gTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATAttt                      >  2:1787426/1‑93 (MQ=255)
                                                                    tttCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCGCATCGTCCATATTTc                     >  2:2546598/1‑93 (MQ=255)
                                                                    tttCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTc                     <  1:3887714/93‑1 (MQ=255)
                                                                     ttcttcATTTGATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCt                    <  2:7220602/93‑1 (MQ=255)
                                                                      tcttcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTg                   <  1:2032597/93‑1 (MQ=255)
                                                                        ttcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGc                 <  1:86909/93‑1 (MQ=255)
                                                                        ttcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGc                 <  2:7898475/93‑1 (MQ=255)
                                                                        ttcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGc                 >  1:6908361/1‑93 (MQ=255)
                                                                         tcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGcc                <  1:6754210/93‑1 (MQ=255)
                                                                         tcATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGcc                <  2:2308500/93‑1 (MQ=255)
                                                                          cATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCt               <  2:5418383/93‑1 (MQ=255)
                                                                          cATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCt               <  2:3235712/93‑1 (MQ=255)
                                                                          cATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCt               <  1:4728353/93‑1 (MQ=255)
                                                                           aTTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtg              <  2:7721362/93‑1 (MQ=255)
                                                                           aTTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtg              <  1:6117028/93‑1 (MQ=255)
                                                                           aTTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtg              <  2:7556034/93‑1 (MQ=255)
                                                                             ttAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggt            <  2:2918624/93‑1 (MQ=255)
                                                                             ttAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggg            >  1:7429794/1‑92 (MQ=255)
                                                                              tAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggtg           <  2:415314/93‑1 (MQ=255)
                                                                               aaTGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggtgg          >  2:5992192/1‑93 (MQ=255)
                                                                               aaTGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggtgg          <  1:3631605/93‑1 (MQ=255)
                                                                               aaTGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggtgg          >  1:7759751/1‑93 (MQ=255)
                                                                               aaTGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCtggtgg          <  2:1865434/93‑1 (MQ=255)
                                                                                aTGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTggtggt         <  1:5006560/93‑1 (MQ=255)
                                                                                  gCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGttt       >  1:1116496/1‑92 (MQ=255)
                                                                                    cTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGttatt     >  1:4328832/1‑93 (MQ=255)
                                                                                    cTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGttatt     <  2:5111974/93‑1 (MQ=255)
                                                                                     tGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGttatta    <  2:6099456/93‑1 (MQ=255)
                                                                                      gACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCTCGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTaa   <  1:5377063/93‑1 (MQ=255)
                                                                                      gACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTaa   <  2:4049356/93‑1 (MQ=255)
                                                                                       aCGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAt  >  2:5795932/1‑93 (MQ=255)
                                                                                       aCGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAt  <  1:5895363/93‑1 (MQ=255)
                                                                                          |                                                                                         
CATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAT  >  NC_000913/4422121‑4422300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 222 total aligned reads displayed.
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTCA  >  NC_000913/4422118‑4422304
                                                                                             |                                                                                             
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGG                                                                                               >  SRR4302543.453211/1‑94 (MQ=60)
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGC                                                                                               >  SRR4302543.6172780/1‑94 (MQ=60)
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGC                                                                                               <  SRR4302543.7814832/94‑1 (MQ=60)
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGCACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGC                                                                                               <  SRR4302543.1679254/94‑1 (MQ=60)
 TGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCG                                                                                              >  SRR4302543.7353042/1‑94 (MQ=60)
 TGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCG                                                                                              <  SRR4302543.3589971/94‑1 (MQ=60)
 TGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCG                                                                                              >  SRR4302543.88715/1‑94 (MQ=60)
   CATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCT                                                                                            >  SRR4302543.6267714/1‑94 (MQ=60)
    ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTT                                                                                           >  SRR4302543.5156462/1‑94 (MQ=60)
    ATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTT                                                                                           >  SRR4302543.711502/1‑94 (MQ=60)
     TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTC                                                                                          <  SRR4302543.4999186/94‑1 (MQ=60)
      ATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCG                                                                                         >  SRR4302543.5224330/1‑94 (MQ=60)
      ATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCG                                                                                         >  SRR4302543.1635899/1‑94 (MQ=60)
       TTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGC                                                                                        >  SRR4302543.5358129/1‑94 (MQ=60)
        TGGCGTTACTCCCCGGTTCCCGCATCAGAATCACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCT                                                                                       <  SRR4302543.3419892/94‑1 (MQ=60)
          CCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTT                                                                                     >  SRR4302543.2979167/1‑94 (MQ=60)
           CGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTC                                                                                    >  SRR4302543.3293699/1‑94 (MQ=60)
           CGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTC                                                                                    >  SRR4302543.6661854/1‑94 (MQ=60)
           CGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTC                                                                                    <  SRR4302543.3406846/94‑1 (MQ=60)
           CGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTC                                                                                    >  SRR4302543.1822643/1‑94 (MQ=60)
            GTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   >  SRR4302543.1941264/1‑94 (MQ=60)
            GTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   <  SRR4302543.1816939/94‑1 (MQ=60)
            GTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   <  SRR4302543.4565733/94‑1 (MQ=60)
            GTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   <  SRR4302543.6953267/94‑1 (MQ=60)
            GTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   >  SRR4302543.1133392/1‑94 (MQ=60)
            GTTACGCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTGACGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   <  SRR4302543.5665786/94‑1 (MQ=60)
            CTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCA                                                                                   <  SRR4302543.5665787/94‑1 (MQ=60)
             TTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAG                                                                                  <  SRR4302543.7713973/94‑1 (MQ=60)
             TTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAG                                                                                  >  SRR4302543.1420662/1‑94 (MQ=60)
             TTACTCCCCGGTTCCCGCATCAGAATTACGTAGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAG                                                                                  <  SRR4302543.1467653/94‑1 (MQ=60)
              TACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGT                                                                                 <  SRR4302543.4184229/94‑1 (MQ=60)
               ACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTG                                                                                >  SRR4302543.5705004/1‑94 (MQ=60)
               ACTCACCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTG                                                                                >  SRR4302543.1147965/1‑94 (MQ=60)
                CTCCCCTGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGTTTGACGCGCTTCGCTTTCAGTGG                                                                               >  SRR4302543.7071350/1‑94 (MQ=60)
                CTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGG                                                                               >  SRR4302543.777888/1‑94 (MQ=60)
                CTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGG                                                                               >  SRR4302543.4112717/1‑94 (MQ=60)
                 TCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGC                                                                              >  SRR4302543.4243074/1‑94 (MQ=60)
                 TCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGC                                                                              >  SRR4302543.4720687/1‑94 (MQ=60)
                  CCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCG                                                                             <  SRR4302543.2545590/94‑1 (MQ=60)
                  CCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCG                                                                             <  SRR4302543.4638318/94‑1 (MQ=60)
                    CCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAA                                                                           >  SRR4302543.926762/1‑94 (MQ=60)
                    CCGGTGCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAA                                                                           <  SRR4302543.2501811/94‑1 (MQ=60)
                     CGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAA                                                                          >  SRR4302543.3780058/1‑94 (MQ=60)
                      GGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAAT                                                                         <  SRR4302543.355876/94‑1 (MQ=60)
                      GGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAAT                                                                         <  SRR4302543.4207710/94‑1 (MQ=60)
                       GTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATT                                                                        >  SRR4302543.2219300/1‑94 (MQ=60)
                       GTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATT                                                                        <  SRR4302543.7957709/94‑1 (MQ=60)
                       GTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATT                                                                        <  SRR4302543.6202004/94‑1 (MQ=60)
                       GTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATT                                                                        >  SRR4302543.4292855/1‑94 (MQ=60)
                        TTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTA                                                                       >  SRR4302543.2725564/1‑94 (MQ=60)
                         TCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAT                                                                      <  SRR4302543.1348197/94‑1 (MQ=60)
                         TCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTAT                                                                      <  SRR4302543.5269699/94‑1 (MQ=60)
                         TCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAAATAT                                                                      <  SRR4302543.1347968/94‑1 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     >  SRR4302543.2968056/1‑94 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     <  SRR4302543.6298706/94‑1 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     >  SRR4302543.5519814/1‑94 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     <  SRR4302543.6940493/94‑1 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     >  SRR4302543.2688675/1‑94 (MQ=60)
                          CCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATG                                                                     <  SRR4302543.764615/94‑1 (MQ=60)
                           CCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGA                                                                    >  SRR4302543.1007105/1‑94 (MQ=60)
                           CCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGA                                                                    <  SRR4302543.7295333/94‑1 (MQ=60)
                            CGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGTGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGAT                                                                   >  SRR4302543.6862985/1‑94 (MQ=60)
                            CGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGAT                                                                   >  SRR4302543.3612292/1‑94 (MQ=60)
                             GCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATT                                                                  <  SRR4302543.7003905/94‑1 (MQ=60)
                             GCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATT                                                                  <  SRR4302543.7003906/94‑1 (MQ=60)
                              CATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTG                                                                 <  SRR4302543.6696299/94‑1 (MQ=60)
                              CATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTG                                                                 <  SRR4302543.4345561/94‑1 (MQ=60)
                               ATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGA                                                                <  SRR4302543.1155276/94‑1 (MQ=60)
                               ATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGA                                                                >  SRR4302543.180862/1‑94 (MQ=60)
                                 CAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATA                                                              <  SRR4302543.2061164/94‑1 (MQ=60)
                                 CAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATA                                                              <  SRR4302543.4091222/94‑1 (MQ=60)
                                 CAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATA                                                              >  SRR4302543.3360053/1‑94 (MQ=60)
                                 CAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATA                                                              <  SRR4302543.2968591/94‑1 (MQ=60)
                                 CAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTATTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATA                                                              >  SRR4302543.1372599/1‑94 (MQ=60)
                                  AGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATAT                                                             >  SRR4302543.1320092/1‑94 (MQ=60)
                                  AGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATAT                                                             <  SRR4302543.7008636/94‑1 (MQ=60)
                                  AGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGACTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATAT                                                             >  SRR4302543.4123990/1‑94 (MQ=60)
                                   GAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCTCTTCGCTTTCAGTGGCGAAATTGTGATTGATATA                                                            <  SRR4302543.7079280/94‑1 (MQ=60)
                                   GAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATA                                                            <  SRR4302543.1051440/94‑1 (MQ=60)
                                   GAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATA                                                            <  SRR4302543.3875476/94‑1 (MQ=60)
                                    AATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAA                                                           >  SRR4302543.4076076/1‑94 (MQ=60)
                                    AATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAA                                                           <  SRR4302543.1961740/94‑1 (MQ=60)
                                    AATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAA                                                           <  SRR4302543.433698/94‑1 (MQ=60)
                                     ATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAA                                                          <  SRR4302543.6157068/94‑1 (MQ=60)
                                     ATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAA                                                          >  SRR4302543.3279180/1‑94 (MQ=60)
                                      TTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAAT                                                         <  SRR4302543.7612264/94‑1 (MQ=60)
                                       TACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATC                                                        >  SRR4302543.4878620/1‑94 (MQ=60)
                                        ACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCA                                                       <  SRR4302543.6727383/94‑1 (MQ=60)
                                         CGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCAC                                                      >  SRR4302543.1150044/1‑94 (MQ=60)
                                         CGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCAC                                                      >  SRR4302543.7590786/1‑94 (MQ=60)
                                         CGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCAC                                                      <  SRR4302543.7556322/94‑1 (MQ=60)
                                          GTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACG                                                     <  SRR4302543.6527115/94‑1 (MQ=60)
                                           TGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGC                                                    >  SRR4302543.4651089/1‑94 (MQ=60)
                                           TGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGC                                                    >  SRR4302543.3621766/1‑94 (MQ=60)
                                            GGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCC                                                   >  SRR4302543.410140/1‑94 (MQ=60)
                                            GGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCC                                                   <  SRR4302543.2475914/94‑1 (MQ=60)
                                             GTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCT                                                  <  SRR4302543.4474675/94‑1 (MQ=60)
                                             GTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCT                                                  >  SRR4302543.4702206/1‑94 (MQ=60)
                                              TAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTA                                                 <  SRR4302543.5718283/94‑1 (MQ=60)
                                               AGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAA                                                >  SRR4302543.3303027/1‑94 (MQ=60)
                                               AGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAA                                                >  SRR4302543.7713546/1‑94 (MQ=60)
                                               AGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAA                                                <  SRR4302543.2789954/94‑1 (MQ=60)
                                                 TACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGC                                              <  SRR4302543.2477351/94‑1 (MQ=60)
                                                  ACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCT                                             <  SRR4302543.6916247/94‑1 (MQ=60)
                                                  ACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCT                                             <  SRR4302543.787572/94‑1 (MQ=60)
                                                    GTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTT                                           >  SRR4302543.937445/1‑94 (MQ=60)
                                                    GTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTT                                           >  SRR4302543.2586543/1‑94 (MQ=60)
                                                      TGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGC                                         <  SRR4302543.6414633/94‑1 (MQ=60)
                                                      TGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGC                                         <  SRR4302543.6317638/94‑1 (MQ=60)
                                                      TGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGC                                         <  SRR4302543.2741338/94‑1 (MQ=60)
                                                       GCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCA                                        >  SRR4302543.7061077/1‑94 (MQ=60)
                                                       GCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCA                                        >  SRR4302543.5737911/1‑94 (MQ=60)
                                                        CGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCAC                                       <  SRR4302543.3979828/94‑1 (MQ=60)
                                                        CGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCAC                                       >  SRR4302543.4454021/1‑94 (MQ=60)
                                                        CGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCAC                                       >  SRR4302543.7310065/1‑94 (MQ=60)
                                                         GCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACA                                      >  SRR4302543.2430916/1‑94 (MQ=60)
                                                         GCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACA                                      >  SRR4302543.6450303/1‑94 (MQ=60)
                                                          CCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAATCTTTGCACAT                                     >  SRR4302543.3908292/1‑94 (MQ=60)
                                                          CCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACAT                                     >  SRR4302543.36289/1‑94 (MQ=60)
                                                          CCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACAT                                     >  SRR4302543.4353258/1‑94 (MQ=60)
                                                            TTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCG                                   <  SRR4302543.1090860/94‑1 (MQ=60)
                                                            TTGCGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCG                                   >  SRR4302543.6929908/1‑94 (MQ=60)
                                                               CGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCC                                >  SRR4302543.5362034/1‑94 (MQ=60)
                                                               CGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCC                                >  SRR4302543.5855138/1‑94 (MQ=60)
                                                               CGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCC                                >  SRR4302543.748353/1‑94 (MQ=60)
                                                               CGCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCC                                >  SRR4302543.1296024/1‑94 (MQ=60)
                                                                GCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCA                               >  SRR4302543.1625872/1‑94 (MQ=60)
                                                                GCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCA                               >  SRR4302543.3552325/1‑94 (MQ=60)
                                                                GCATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCA                               >  SRR4302543.3923908/1‑94 (MQ=60)
                                                                GCATCTGTTTCTTCATTTAATGCCTGACGCGCTGCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCA                               <  SRR4302543.7705141/94‑1 (MQ=60)
                                                                  ATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATA                             >  SRR4302543.5449711/1‑94 (MQ=60)
                                                                  ATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATA                             >  SRR4302543.6137010/1‑94 (MQ=60)
                                                                  ATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATA                             >  SRR4302543.3811375/1‑94 (MQ=60)
                                                                  ATCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATA                             >  SRR4302543.2102103/1‑94 (MQ=60)
                                                                   TCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATAT                            >  SRR4302543.4829681/1‑94 (MQ=60)
                                                                   TCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATAT                            >  SRR4302543.1587640/1‑94 (MQ=60)
                                                                   TCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATAT                            <  SRR4302543.4936112/94‑1 (MQ=60)
                                                                   TCTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATAT                            >  SRR4302543.4627209/1‑94 (MQ=60)
                                                                    CTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATT                           >  SRR4302543.3010685/1‑94 (MQ=60)
                                                                    CTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATT                           <  SRR4302543.6506677/94‑1 (MQ=60)
                                                                    CTGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATT                           <  SRR4302543.3132336/94‑1 (MQ=60)
                                                                     TGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTT                          <  SRR4302543.3084610/94‑1 (MQ=60)
                                                                     TGTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTT                          <  SRR4302543.6213003/94‑1 (MQ=60)
                                                                      GTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTC                         >  SRR4302543.5482545/1‑94 (MQ=60)
                                                                      GTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTC                         >  SRR4302543.6457968/1‑94 (MQ=60)
                                                                      GTTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTC                         >  SRR4302543.2182909/1‑94 (MQ=60)
                                                                       TTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCT                        <  SRR4302543.3922031/94‑1 (MQ=60)
                                                                       TTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCT                        <  SRR4302543.1429506/94‑1 (MQ=60)
                                                                       TTTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCT                        <  SRR4302543.6649977/94‑1 (MQ=60)
                                                                        TTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTG                       <  SRR4302543.4959597/94‑1 (MQ=60)
                                                                        TTCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTG                       >  SRR4302543.5862307/1‑94 (MQ=60)
                                                                         TCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGG                      >  SRR4302543.6846105/1‑94 (MQ=60)
                                                                         TCTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGG                      <  SRR4302543.2050856/94‑1 (MQ=60)
                                                                          CTTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGC                     >  SRR4302543.6973290/1‑94 (MQ=60)
                                                                           TTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCC                    <  SRR4302543.7205595/94‑1 (MQ=60)
                                                                           TTCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCC                    <  SRR4302543.87710/94‑1 (MQ=60)
                                                                            TCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCT                   <  SRR4302543.1983303/94‑1 (MQ=60)
                                                                            TCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCT                   <  SRR4302543.6396861/94‑1 (MQ=60)
                                                                            TCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCT                   <  SRR4302543.6817997/94‑1 (MQ=60)
                                                                            TCATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCT                   <  SRR4302543.4412708/94‑1 (MQ=60)
                                                                             CATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTG                  <  SRR4302543.7655089/94‑1 (MQ=60)
                                                                             CATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTG                  <  SRR4302543.4771550/94‑1 (MQ=60)
                                                                             CATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTG                  <  SRR4302543.4950104/94‑1 (MQ=60)
                                                                             CATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTG                  <  SRR4302543.4771551/94‑1 (MQ=60)
                                                                              ATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGG                 >  SRR4302543.7950315/1‑94 (MQ=60)
                                                                              ATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGG                 <  SRR4302543.6174970/94‑1 (MQ=60)
                                                                              ATTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTG‑ACCTCGTCCATATTTtttgtccggt                >  SRR4302543.5219668/1‑84 (MQ=60)
                                                                               TTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGT                <  SRR4302543.5459539/94‑1 (MQ=60)
                                                                               TTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGG                >  SRR4302543.7501032/1‑94 (MQ=60)
                                                                               TTTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGG                >  SRR4302543.5936605/1‑94 (MQ=60)
                                                                                TTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGTACATCGTCCATATTTCTGGCCTGGTG               >  SRR4302543.3908328/1‑94 (MQ=60)
                                                                                TTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTG               <  SRR4302543.481851/94‑1 (MQ=60)
                                                                                TTAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTG               <  SRR4302543.226779/94‑1 (MQ=60)
                                                                                 TAATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGG              >  SRR4302543.2582981/1‑94 (MQ=60)
                                                                                  AATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGT             <  SRR4302543.3663579/94‑1 (MQ=60)
                                                                                  AATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGT             >  SRR4302543.1818593/1‑94 (MQ=60)
                                                                                   ATGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTT            <  SRR4302543.5052129/94‑1 (MQ=60)
                                                                                    TGCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTT           >  SRR4302543.1126605/1‑94 (MQ=60)
                                                                                     GCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTAT          >  SRR4302543.3791175/1‑94 (MQ=60)
                                                                                     GCCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTAT          >  SRR4302543.3130254/1‑94 (MQ=60)
                                                                                      CCTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATT         >  SRR4302543.4368117/1‑94 (MQ=60)
                                                                                       CTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTA        >  SRR4302543.6556881/1‑94 (MQ=60)
                                                                                       CTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTA        >  SRR4302543.7622278/1‑94 (MQ=60)
                                                                                       CTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTA        >  SRR4302543.178072/1‑94 (MQ=60)
                                                                                       CTGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTA        >  SRR4302543.1410283/1‑94 (MQ=60)
                                                                                        TGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAA       <  SRR4302543.1122815/94‑1 (MQ=60)
                                                                                        TGACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAA       <  SRR4302543.1080565/94‑1 (MQ=60)
                                                                                        CGACGCGCTTCGCTGTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGGTTTCCACATCGTCCATATTTCTGGCCTGGTGGTTATTAA       <  SRR4302543.2734937/94‑1 (MQ=60)
                                                                                         GACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCTCGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAT      <  SRR4302543.5425785/94‑1 (MQ=60)
                                                                                         GACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAT      <  SRR4302543.656638/94‑1 (MQ=60)
                                                                                         GACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAAT      <  SRR4302543.5425552/94‑1 (MQ=60)
                                                                                          ACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATT     <  SRR4302543.2527543/94‑1 (MQ=60)
                                                                                          ACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATT     <  SRR4302543.5949126/94‑1 (MQ=60)
                                                                                          ACGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATT     <  SRR4302543.909059/94‑1 (MQ=60)
                                                                                           CGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTT    >  SRR4302543.6684034/1‑94 (MQ=60)
                                                                                           CGCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTT    <  SRR4302543.3243308/94‑1 (MQ=60)
                                                                                            GCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTC   <  SRR4302543.7889818/94‑1 (MQ=60)
                                                                                            GCGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTC   <  SRR4302543.5608392/94‑1 (MQ=60)
                                                                                             CGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTCA  <  SRR4302543.1977525/94‑1 (MQ=60)
                                                                                             CGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTCA  <  SRR4302543.3591715/94‑1 (MQ=60)
                                                                                             |                                                                                             
GTGCATATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGAAATTATGATTGATATAAATCACGCCTAAGCTTTGCACATCGTCCATATTTCTGGCCTGGTGGTTATTAATTTCA  >  NC_000913/4422118‑4422304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑