Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,415,130 |
C→T |
P201S (CCT→TCT) |
yjfP → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,415,130 | 0 | C | T | 99.5%
| 753.0
/ NA
| 209 | P201S (CCT→TCT) | yjfP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (94/114); total (94/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 230 total aligned reads displayed.
CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGT > NC_000913/4415040‑4415219
|
ccACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtct > 1:2551022/1‑93 (MQ=255)
aCTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgc < 1:3747151/93‑1 (MQ=255)
cTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgcc < 2:4020889/93‑1 (MQ=255)
cTGGCAGAGTGGAAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGtgtctgcc < 2:3490800/93‑1 (MQ=255)
ggCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCcgc > 1:4590363/1‑92 (MQ=255)
gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa > 2:144616/1‑93 (MQ=255)
gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa > 2:1558183/1‑93 (MQ=255)
gagTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGaa > 1:3695309/1‑93 (MQ=255)
agTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAAt > 1:3434818/1‑93 (MQ=255)
gTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATc < 1:1560194/93‑1 (MQ=255)
tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa > 2:3111485/1‑93 (MQ=255)
tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa > 1:2916105/1‑93 (MQ=255)
tGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCa > 1:511196/1‑93 (MQ=255)
ggAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACt > 2:2855446/1‑93 (MQ=255)
gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa < 2:899176/93‑1 (MQ=255)
gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa < 2:3291799/93‑1 (MQ=255)
gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa < 1:2112284/93‑1 (MQ=255)
gAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTa < 2:266647/93‑1 (MQ=255)
aaGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAc < 2:2458067/93‑1 (MQ=255)
aaGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAc < 1:33375/93‑1 (MQ=255)
aGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACg > 1:4163285/1‑93 (MQ=255)
gCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGt < 2:4634035/93‑1 (MQ=255)
acGACAAACCACCTGCAACAGCTTAGTGACAGACTTCTACTGCTGTGGCATGGCTTCGACGATGACGTTGTGTCTGGCGACGAATCACTGCGt < 2:4360227/92‑1 (MQ=255)
cGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGtt < 1:2989069/93‑1 (MQ=255)
cGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGtt < 1:3248987/93‑1 (MQ=255)
cGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGtt < 2:2073385/93‑1 (MQ=255)
cAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgc < 2:3848759/93‑1 (MQ=255)
aaaCCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgca > 2:4137844/1‑93 (MQ=255)
aaCCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcag > 1:3970961/1‑93 (MQ=255)
accaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcagc > 2:3710472/1‑93 (MQ=255)
ccaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTTGCATGGCCTCGACGATGACGTTTTGCCTGCCGACGTATCACTACGTTTgcagca < 2:3182838/93‑1 (MQ=255)
ccaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcagca > 2:2597863/1‑93 (MQ=255)
ccaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcagca < 2:3590825/93‑1 (MQ=255)
ccaccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTgcagca < 2:2744732/93‑1 (MQ=255)
caccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGcagcag < 1:849365/93‑1 (MQ=255)
cccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg < 1:1332202/92‑1 (MQ=255)
cccTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAgg < 2:2565700/92‑1 (MQ=255)
cTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGcc < 2:1787291/93‑1 (MQ=255)
ggAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCtt > 1:1070534/1‑93 (MQ=255)
gAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTa < 2:78795/93‑1 (MQ=255)
aacaacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTaa < 1:506631/93‑1 (MQ=255)
acaacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAg < 1:1593289/93‑1 (MQ=255)
caacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGc > 2:554735/1‑93 (MQ=255)
aacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCg > 2:4473392/1‑93 (MQ=255)
aacTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCg > 2:4286991/1‑93 (MQ=255)
acTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATTACTACGTTTGCAGCAGGCCTTAAGCga > 1:1535504/1‑93 (MQ=255)
acTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAgaga > 2:3450380/1‑93 (MQ=255)
acTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCga < 1:1500593/93‑1 (MQ=255)
acTTAGTGACAGACCTCTACTGCTGTGGCATGGCCCCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCga > 1:1712924/1‑93 (MQ=255)
cTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCgag > 2:697450/1‑93 (MQ=255)
ttAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCgaga < 2:2247905/93‑1 (MQ=255)
tAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgac < 1:2375629/93‑1 (MQ=255)
aGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacg < 1:3527934/93‑1 (MQ=255)
gTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacgg < 1:1452316/93‑1 (MQ=255)
gACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggga < 1:3261736/93‑1 (MQ=255)
gACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacggga < 1:3891380/93‑1 (MQ=255)
cAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacgggacg > 1:383968/1‑93 (MQ=255)
aGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAgacgggacgg < 2:735591/93‑1 (MQ=255)
gACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGacgggacggg > 1:3188400/1‑93 (MQ=255)
gACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGAAGCAGGCCTTAAGCGAGacgggacggg > 1:2433535/1‑93 (MQ=255)
ccTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAt < 2:4442032/93‑1 (MQ=255)
ccTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGAt < 1:4339960/93‑1 (MQ=255)
ctctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATa > 2:1842803/1‑93 (MQ=255)
ctctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATa > 2:2341324/1‑93 (MQ=255)
tctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaa < 2:1678793/93‑1 (MQ=255)
cctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaa < 2:228777/92‑1 (MQ=255)
ctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaaa < 1:953548/93‑1 (MQ=255)
ctACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATaaa < 1:3623444/93‑1 (MQ=255)
tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc > 2:1832706/1‑93 (MQ=255)
tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc > 2:2087435/1‑93 (MQ=255)
tACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAc < 2:138583/93‑1 (MQ=255)
aCTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACt < 1:2308468/93‑1 (MQ=255)
aCTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACt < 1:3622371/93‑1 (MQ=255)
gctgTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCt < 2:1259925/93‑1 (MQ=255)
tgtgGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTaa > 1:723059/1‑93 (MQ=255)
tgGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAAcc < 2:3664854/93‑1 (MQ=255)
tgGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAAcc < 2:1915224/93‑1 (MQ=255)
gCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTg < 1:1868682/93‑1 (MQ=255)
gaTGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGt < 1:1224213/92‑1 (MQ=255)
aTGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGtt > 2:925545/1‑93 (MQ=255)
tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc > 2:2631903/1‑93 (MQ=255)
tGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTc > 2:1603453/1‑93 (MQ=255)
ggCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCa > 2:3907260/1‑93 (MQ=255)
gCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCAt < 2:723685/93‑1 (MQ=255)
ccTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATg < 2:2467369/93‑1 (MQ=255)
ccTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATg > 2:1175213/1‑93 (MQ=255)
ccTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATg < 1:4467464/93‑1 (MQ=255)
cgacgaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCa > 2:2712198/1‑93 (MQ=255)
gaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCa > 2:1125806/1‑93 (MQ=255)
gaTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCa > 1:4269851/1‑93 (MQ=255)
aTGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAg > 1:2498505/1‑93 (MQ=255)
tGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAgg > 1:2684059/1‑93 (MQ=255)
tGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAgg > 2:4648798/1‑93 (MQ=255)
gACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgc < 1:3160269/93‑1 (MQ=255)
aCGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcg < 2:4586458/93‑1 (MQ=255)
aCGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcg > 1:4105953/1‑93 (MQ=255)
gTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcgtg > 1:4177852/1‑93 (MQ=255)
ttGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACCGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcgtgc > 1:4611623/1‑93 (MQ=255)
gtgtCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcgtgcgt > 2:1314399/1‑93 (MQ=255)
gtgtCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGgcgggcgt > 1:1274915/1‑93 (MQ=255)
|
CCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGT > NC_000913/4415040‑4415219
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCAC > NC_000913/4415037‑4415222
|
GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGT > SRR4302535.2737013/1‑94 (MQ=60)
CGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTC > SRR4302535.3219422/1‑94 (MQ=60)
GCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCT < SRR4302535.4698780/94‑1 (MQ=60)
GCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCT < SRR4302535.1450522/94‑1 (MQ=60)
GCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCT < SRR4302535.291036/94‑1 (MQ=60)
GCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCT > SRR4302535.2569390/1‑94 (MQ=60)
CACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGC > SRR4302535.4226726/1‑94 (MQ=60)
ACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCC < SRR4302535.3773075/94‑1 (MQ=60)
CTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCG > SRR4302535.3752366/1‑94 (MQ=60)
TGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGC > SRR4302535.4621609/1‑94 (MQ=60)
AGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAA > SRR4302535.3720888/1‑94 (MQ=60)
GAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAAT > SRR4302535.3458688/1‑94 (MQ=60)
AGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATC < SRR4302535.2914566/94‑1 (MQ=60)
GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA > SRR4302535.514771/1‑94 (MQ=60)
GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA < SRR4302535.3345235/94‑1 (MQ=60)
GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA < SRR4302535.1571437/94‑1 (MQ=60)
GTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCA > SRR4302535.2936695/1‑94 (MQ=60)
GGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACT < SRR4302535.2462570/94‑1 (MQ=60)
GGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACT < SRR4302535.468222/94‑1 (MQ=60)
GAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAC < SRR4302535.2973759/94‑1 (MQ=60)
GAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTAC < SRR4302535.2127531/94‑1 (MQ=60)
AAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACG > SRR4302535.4191788/1‑94 (MQ=60)
AAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACG < SRR4302535.33631/94‑1 (MQ=60)
GCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTT < SRR4302535.4203480/94‑1 (MQ=60)
CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT < SRR4302535.3010025/94‑1 (MQ=60)
CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT < SRR4302535.3271558/94‑1 (MQ=60)
CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTT > SRR4302535.4506579/1‑94 (MQ=60)
CGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATCACGTTGTGTCTGCCGAAGAATCACTACGTTT > SRR4302535.3158428/1‑94 (MQ=60)
GACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTG < SRR4302535.787896/94‑1 (MQ=60)
AAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAG > SRR4302535.4351594/1‑94 (MQ=60)
AAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAG > SRR4302535.3998084/1‑94 (MQ=60)
ACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCA > SRR4302535.134686/1‑94 (MQ=60)
CCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAG > SRR4302535.3242901/1‑94 (MQ=60)
CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG > SRR4302535.4508885/1‑94 (MQ=60)
CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG < SRR4302535.855340/94‑1 (MQ=60)
CACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGG > SRR4302535.3959950/1‑94 (MQ=60)
CCCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGC < SRR4302535.1341705/94‑1 (MQ=60)
CCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCC > SRR4302535.3199490/1‑94 (MQ=60)
TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT > SRR4302535.2431080/1‑94 (MQ=60)
TGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTT > SRR4302535.1078145/1‑94 (MQ=60)
GGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTA > SRR4302535.1525151/1‑94 (MQ=60)
GAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAA < SRR4302535.2054037/94‑1 (MQ=60)
GACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGGCGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG < SRR4302535.3646499/94‑1 (MQ=60)
AACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG < SRR4302535.2561491/94‑1 (MQ=60)
AACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAG < SRR4302535.510172/94‑1 (MQ=60)
ACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGC < SRR4302535.692100/94‑1 (MQ=60)
ACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGC < SRR4302535.2682668/94‑1 (MQ=60)
ACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGC < SRR4302535.1604787/94‑1 (MQ=60)
CAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCG > SRR4302535.389197/1‑94 (MQ=60)
AACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATTACTACGTTTGCAGCAGGCCTTAAGCGA > SRR4302535.1546567/1‑94 (MQ=60)
AACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCCCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGA > SRR4302535.1725307/1‑94 (MQ=60)
ACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAG < SRR4302535.1511387/94‑1 (MQ=60)
ACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAG > SRR4302535.3274946/1‑94 (MQ=60)
ACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAG < SRR4302535.462718/94‑1 (MQ=60)
CTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGA > SRR4302535.1200259/1‑94 (MQ=60)
TTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAC < SRR4302535.3166235/94‑1 (MQ=60)
TTAGTGACAGACCTCGACTGCTGTGGCATAGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGAC < SRR4302535.1300910/94‑1 (MQ=60)
TAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACG < SRR4302535.2392696/94‑1 (MQ=60)
AGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGG < SRR4302535.3552435/94‑1 (MQ=60)
GTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGG < SRR4302535.2668841/94‑1 (MQ=60)
GTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGG < SRR4302535.1462707/94‑1 (MQ=60)
GACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGAG > SRR4302535.1570270/1‑94 (MQ=60)
GACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGAC < SRR4302535.3284395/94‑1 (MQ=60)
GACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGAC < SRR4302535.3918062/94‑1 (MQ=60)
GCAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG < SRR4302535.3447168/94‑1 (MQ=60)
GCAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG < SRR4302535.3860936/94‑1 (MQ=60)
ACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACG > SRR4302535.386628/1‑94 (MQ=60)
AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGTGAGACGGGGCGGG > SRR4302535.4045695/1‑94 (MQ=60)
AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGG < SRR4302535.622483/94‑1 (MQ=60)
AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGG > SRR4302535.3210450/1‑94 (MQ=60)
AGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGAAGCAGGCCTTAAGCGAGACGGGACGGG > SRR4302535.2451067/1‑94 (MQ=60)
CCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATA < SRR4302535.4369644/94‑1 (MQ=60)
CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC < SRR4302535.3648559/94‑1 (MQ=60)
CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC > SRR4302535.4163248/1‑94 (MQ=60)
CTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAAC < SRR4302535.960304/94‑1 (MQ=60)
caccgccGTGGCACGGCCTCGACGATGCCGTTGTTTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACT < SRR4302535.1339767/87‑1 (MQ=60)
ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG < SRR4302535.2408756/94‑1 (MQ=60)
ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG < SRR4302535.3647482/94‑1 (MQ=60)
ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTG < SRR4302535.2324990/94‑1 (MQ=60)
ACTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACCACGTTTGCAGCAGGCCTTAAGCGAGGCGGGACGGGATAAACTG > SRR4302535.1768980/1‑94 (MQ=60)
CTGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGC > SRR4302535.1272141/1‑94 (MQ=60)
TGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCT < SRR4302535.4461689/94‑1 (MQ=60)
TGCTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCT < SRR4302535.147863/94‑1 (MQ=60)
CTGTGGCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAA > SRR4302535.728136/1‑94 (MQ=60)
GCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGT < SRR4302535.1678197/94‑1 (MQ=60)
GCATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGT < SRR4302535.1882153/94‑1 (MQ=60)
GATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTT < SRR4302535.1232971/94‑1 (MQ=60)
CATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTT > SRR4302535.4119603/1‑94 (MQ=60)
CATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTT > SRR4302535.3648469/1‑94 (MQ=60)
CATGGCCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTT > SRR4302535.1577387/1‑94 (MQ=60)
CCTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGG < SRR4302535.4498118/94‑1 (MQ=60)
CTCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGC > SRR4302535.1808870/1‑94 (MQ=60)
TCGACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCA < SRR4302535.376555/94‑1 (MQ=60)
GACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGC < SRR4302535.3305421/94‑1 (MQ=60)
ACGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCC < SRR4302535.98149/94‑1 (MQ=60)
CGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCA < SRR4302535.3719382/94‑1 (MQ=60)
CGATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCA > SRR4302535.4299085/1‑94 (MQ=60)
GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCGG < SRR4302535.2233282/94‑1 (MQ=60)
GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAG < SRR4302535.929480/94‑1 (MQ=60)
GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAG > SRR4302535.13872/1‑94 (MQ=60)
GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAG > SRR4302535.2516530/1‑94 (MQ=60)
GATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAG > SRR4302535.3566560/1‑94 (MQ=60)
ATGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGG > SRR4302535.2703252/1‑94 (MQ=60)
TGACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGC < SRR4302535.1553387/94‑1 (MQ=60)
GACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCG < SRR4302535.3182195/94‑1 (MQ=60)
GACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCG > SRR4302535.51206/1‑94 (MQ=60)
GACGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCG > SRR4302535.4134067/1‑94 (MQ=60)
CGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGNGNCNGGACGGGATAAACTGCTAACCTGTTCATGGCNGCCAGGCGTG < SRR4302535.3513327/94‑1 (MQ=60)
CGTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTG > SRR4302535.4206450/1‑94 (MQ=60)
GTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGC < SRR4302535.4273503/94‑1 (MQ=60)
GTTGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACCGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGC > SRR4302535.4642952/1‑94 (MQ=60)
TGTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGGGCGT > SRR4302535.1284019/1‑94 (MQ=60)
GTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTC < SRR4302535.2383474/94‑1 (MQ=60)
GTGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTA > SRR4302535.819204/1‑94 (MQ=60)
TGTCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTGACCTGTTCATGGCAGCCAGGCGTGCGTCA > SRR4302535.531407/1‑94 (MQ=60)
GTCTGCCGACGAATCACTACATTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCAC < SRR4302535.3857824/94‑1 (MQ=60)
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GCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCAC > NC_000913/4415037‑4415222
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
