Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,519,062 |
A→G |
I176T (ATA→ACA) |
yjhF ← |
putative transport system permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,519,062 | 0 | A | G | 100.0%
| 561.7
/ NA
| 174 | I176T (ATA→ACA) | yjhF | putative transport system permease |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (83/91); total (83/91) |
Only 100 of 181 total aligned reads displayed.
TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA > NC_000913/4518972‑4519151
|
ttAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTc > 1:1790757/1‑93 (MQ=255)
aaGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGt > 2:3654363/1‑93 (MQ=255)
aaGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCCCAACGAATAAAGGTTGGAATGCCGACATTGATACCGTATGGCAGt > 2:2392297/1‑93 (MQ=255)
aGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTa < 2:3229186/93‑1 (MQ=255)
aGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTa > 1:209546/1‑93 (MQ=255)
ggCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAc > 1:155396/1‑93 (MQ=255)
gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCaa > 2:406044/1‑93 (MQ=255)
gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCaa > 2:875084/1‑93 (MQ=255)
gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCaa < 1:3407870/93‑1 (MQ=255)
gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGACAGTACCaa > 1:4043729/1‑93 (MQ=255)
tCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAt < 2:1654936/93‑1 (MQ=255)
tCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAt > 2:4130673/1‑93 (MQ=255)
ggAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCt > 1:3527272/1‑93 (MQ=255)
ggAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCt > 1:2955299/1‑93 (MQ=255)
aataatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTAc < 1:4175685/93‑1 (MQ=255)
ataatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACa < 1:3747557/93‑1 (MQ=255)
ataatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACa > 1:2996399/1‑93 (MQ=255)
taatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAt > 1:3738258/1‑93 (MQ=255)
aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTGCCAATCCTACATc < 1:519059/93‑1 (MQ=255)
aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATc < 1:2811478/93‑1 (MQ=255)
aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATc > 1:2721213/1‑93 (MQ=255)
aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATc < 1:2464745/93‑1 (MQ=255)
aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATc < 1:3701913/93‑1 (MQ=255)
atGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCa > 2:2689360/1‑93 (MQ=255)
atGCGCTGGCAGAATTTATTCAATACCGGGACGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCa > 1:444323/1‑93 (MQ=255)
tGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAg < 1:4018069/93‑1 (MQ=255)
gcgcTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATGCCGTATGTCAGTACCACTCCTACATCAgc < 2:734955/93‑1 (MQ=255)
gcTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAgcgc < 1:3219483/93‑1 (MQ=255)
gcTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAgcgc > 2:1707894/1‑93 (MQ=255)
gCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCata < 2:4197003/93‑1 (MQ=255)
aGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAtt < 1:4670913/93‑1 (MQ=255)
aGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAtt > 2:117611/1‑93 (MQ=255)
aGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAtt < 2:2923260/93‑1 (MQ=255)
aGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAtt < 1:3887650/93‑1 (MQ=255)
gAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTc > 2:1593681/1‑93 (MQ=255)
gAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTc > 1:1230027/1‑93 (MQ=255)
aaTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTcc < 2:1896201/93‑1 (MQ=255)
aaTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTcc > 1:80999/1‑93 (MQ=255)
aTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTccc > 2:1500386/1‑93 (MQ=255)
aTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTccc > 1:1638691/1‑93 (MQ=255)
aTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTccc > 1:2465629/1‑93 (MQ=255)
aTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTccc < 2:3026429/93‑1 (MQ=255)
aTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTccc < 2:2506157/93‑1 (MQ=255)
tttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCt > 1:2124484/1‑93 (MQ=255)
tttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCt < 2:2132811/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg < 1:192757/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg < 2:243516/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg < 1:487569/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg < 1:3171934/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg < 1:4306902/93‑1 (MQ=255)
ttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTg > 1:4030641/1‑93 (MQ=255)
tATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTgg > 2:2794138/1‑93 (MQ=255)
tATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTgg > 2:371492/1‑93 (MQ=255)
aTTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGc < 1:3571624/93‑1 (MQ=255)
tCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGa < 1:4623200/93‑1 (MQ=255)
aaTACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATa > 2:3038781/1‑93 (MQ=255)
tACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAc < 1:3643271/93‑1 (MQ=255)
tACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAc > 1:1245648/1‑93 (MQ=255)
aCCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACa < 2:4431055/93‑1 (MQ=255)
aCCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACa < 1:663856/93‑1 (MQ=255)
cGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGt < 1:4573899/93‑1 (MQ=255)
ggCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCg < 2:3555102/93‑1 (MQ=255)
gCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCgg < 1:1343480/93‑1 (MQ=255)
ccGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCggg < 2:1818106/93‑1 (MQ=255)
cGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGc < 2:2672313/93‑1 (MQ=255)
aaaGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCgg < 2:4653747/93‑1 (MQ=255)
aaGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCggg > 2:4276987/1‑93 (MQ=255)
aaGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCggg > 1:1944522/1‑93 (MQ=255)
aTAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgc > 1:592213/1‑93 (MQ=255)
aTAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgc > 1:1602400/1‑93 (MQ=255)
tAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgcg < 2:2719091/93‑1 (MQ=255)
aGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgcggcg > 2:2318826/1‑93 (MQ=255)
ggTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATCACAGTCGGGCCGGGGTGcggcgg > 2:59283/1‑93 (MQ=255)
gTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCggcggc > 2:3315517/1‑93 (MQ=255)
gTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCggcggc < 1:619699/93‑1 (MQ=255)
ttGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCa > 1:2048251/1‑93 (MQ=255)
ttGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCa > 2:2057896/1‑93 (MQ=255)
tGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaa > 1:2474299/1‑93 (MQ=255)
tGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaa < 1:1656546/93‑1 (MQ=255)
ggAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaaa > 1:3360830/1‑93 (MQ=255)
gAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaaaa < 2:1317230/93‑1 (MQ=255)
aaTGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaaaaa > 1:2109679/1‑93 (MQ=255)
gCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAcc > 2:830789/1‑93 (MQ=255)
gCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAcc < 2:585111/93‑1 (MQ=255)
cGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgt < 2:2861275/93‑1 (MQ=255)
cGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgt > 1:2315487/1‑93 (MQ=255)
gACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtg > 1:999168/1‑93 (MQ=255)
gACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtg < 2:1861210/93‑1 (MQ=255)
gACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGACCGGGGTGCGGCGGCAAAAAACCgtg > 2:3794181/1‑93 (MQ=255)
aCAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtgt < 2:3362292/93‑1 (MQ=255)
cAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGtgtg < 2:953666/93‑1 (MQ=255)
aaTGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGc > 1:2995921/1‑93 (MQ=255)
attaTACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCTGCGGCAAAAAACCCGGTGCg > 2:1365106/4‑93 (MQ=255)
gATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAc > 2:3918705/1‑93 (MQ=255)
gATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAc < 2:130869/93‑1 (MQ=255)
gATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAc > 1:3822961/1‑93 (MQ=255)
tACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGCGTGCGGCGGCAAAAAACCGTGCGCGACCa > 2:3451971/1‑93 (MQ=255)
gTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaa > 2:3213920/1‑93 (MQ=255)
gTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaa > 2:297826/1‑93 (MQ=255)
tatgTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaaa > 2:4613500/1‑93 (MQ=255)
|
TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA > NC_000913/4518972‑4519151
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACC > NC_000913/4518969‑4519153
|
TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATG < SRR4302535.1861736/94‑1 (MQ=60)
TTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTC < SRR4302535.721332/94‑1 (MQ=60)
TTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTC > SRR4302535.549948/1‑94 (MQ=60)
TTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTC > SRR4302535.1803706/1‑94 (MQ=60)
AAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGA > SRR4302535.3849989/1‑94 (MQ=60)
AAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTA > SRR4302535.1615363/1‑94 (MQ=60)
AAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTA > SRR4302535.210984/1‑94 (MQ=60)
AGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAC > SRR4302535.156494/1‑94 (MQ=60)
GGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACC > SRR4302535.325738/1‑94 (MQ=60)
CGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGACAGTACCAA > SRR4302535.4071413/1‑94 (MQ=60)
GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAT < SRR4302535.3431592/94‑1 (MQ=60)
GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAT < SRR4302535.4217096/94‑1 (MQ=60)
CGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCT > SRR4302535.2976054/1‑94 (MQ=60)
CGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCT > SRR4302535.3551766/1‑94 (MQ=60)
GGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTAAGTACCAATCCTA > SRR4302535.1986070/1‑94 (MQ=60)
AATAATGCGCTGGCAGAATTTATTCAATACCGGTCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACA < SRR4302535.4187618/94‑1 (MQ=60)
AATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACA < SRR4302535.4204266/94‑1 (MQ=60)
AATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACA > SRR4302535.3017408/1‑94 (MQ=60)
ATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAT < SRR4302535.2474900/94‑1 (MQ=60)
ATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAT < SRR4302535.4057205/94‑1 (MQ=60)
ATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAT < SRR4302535.3773485/94‑1 (MQ=60)
ATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAT > SRR4302535.3764129/1‑94 (MQ=60)
TAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATC > SRR4302535.2740650/1‑94 (MQ=60)
TAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATC > SRR4302535.2605756/1‑94 (MQ=60)
AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTGCCAATCCTACATCA < SRR4302535.522692/94‑1 (MQ=60)
AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA < SRR4302535.3727554/94‑1 (MQ=60)
AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA < SRR4302535.2831462/94‑1 (MQ=60)
AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA < SRR4302535.2482517/94‑1 (MQ=60)
AATGCGCTGGCAGAATTTATTCAATACCGGGACGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA > SRR4302535.447432/1‑94 (MQ=60)
TGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGC < SRR4302535.4045559/94‑1 (MQ=60)
GCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCG > SRR4302535.1611971/1‑94 (MQ=60)
GCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCC < SRR4302535.3241791/94‑1 (MQ=60)
CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCA > SRR4302535.606885/1‑94 (MQ=60)
TGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCAT < SRR4302535.2777578/94‑1 (MQ=60)
GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT < SRR4302535.2130528/94‑1 (MQ=60)
CAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATT < SRR4302535.3685230/94‑1 (MQ=60)
AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC < SRR4302535.4702463/94‑1 (MQ=60)
AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC > SRR4302535.3577390/1‑94 (MQ=60)
AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC > SRR4302535.1238818/1‑94 (MQ=60)
AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC < SRR4302535.3914316/94‑1 (MQ=60)
AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC < SRR4302535.172972/94‑1 (MQ=60)
GAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCC > SRR4302535.81576/1‑94 (MQ=60)
AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCC < SRR4302535.52060/94‑1 (MQ=60)
AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCC > SRR4302535.1650541/1‑94 (MQ=60)
AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCC > SRR4302535.2483406/1‑94 (MQ=60)
ATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCT > SRR4302535.2139796/1‑94 (MQ=60)
TTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTG > SRR4302535.4058217/1‑94 (MQ=60)
TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG < SRR4302535.3154080/94‑1 (MQ=60)
TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG < SRR4302535.3193892/94‑1 (MQ=60)
TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG < SRR4302535.490987/94‑1 (MQ=60)
TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG < SRR4302535.4336367/94‑1 (MQ=60)
TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG < SRR4302535.194084/94‑1 (MQ=60)
ATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCG < SRR4302535.3596391/94‑1 (MQ=60)
TCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGAT < SRR4302535.4654600/94‑1 (MQ=60)
ATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAC < SRR4302535.943218/94‑1 (MQ=60)
ATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAC > SRR4302535.1254537/1‑94 (MQ=60)
TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA < SRR4302535.3668502/94‑1 (MQ=60)
ACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAG < SRR4302535.668497/94‑1 (MQ=60)
ACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAG > SRR4302535.4390388/1‑94 (MQ=60)
ACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAG < SRR4302535.3392497/94‑1 (MQ=60)
CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC < SRR4302535.701001/94‑1 (MQ=60)
CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC < SRR4302535.4605075/94‑1 (MQ=60)
GCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGG < SRR4302535.375794/94‑1 (MQ=60)
GCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGG > SRR4302535.2112250/1‑94 (MQ=60)
GCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGG < SRR4302535.1353069/94‑1 (MQ=60)
CGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCC < SRR4302535.1335079/94‑1 (MQ=60)
CAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGG > SRR4302535.3943002/1‑94 (MQ=60)
AAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGG > SRR4302535.1958523/1‑94 (MQ=60)
AATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGC > SRR4302535.1613961/1‑94 (MQ=60)
AATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGC > SRR4302535.596364/1‑94 (MQ=60)
AATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGC < SRR4302535.248973/94‑1 (MQ=60)
ATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCG > SRR4302535.4615125/1‑94 (MQ=60)
AAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCG < SRR4302535.1505580/94‑1 (MQ=60)
GTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCA < SRR4302535.624008/94‑1 (MQ=60)
GTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCA > SRR4302535.2062999/1‑94 (MQ=60)
TTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAA > SRR4302535.2492145/1‑94 (MQ=60)
TGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAA < SRR4302535.1668529/94‑1 (MQ=60)
TGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAA > SRR4302535.3384222/1‑94 (MQ=60)
GAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAA > SRR4302535.2124895/1‑94 (MQ=60)
ATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAC < SRR4302535.1807619/94‑1 (MQ=60)
GCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCG < SRR4302535.4590019/94‑1 (MQ=60)
GCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCG < SRR4302535.1943848/94‑1 (MQ=60)
CCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGT > SRR4302535.2332054/1‑94 (MQ=60)
CCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGG > SRR4302535.3016837/1‑94 (MQ=60)
CGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTG < SRR4302535.2246411/94‑1 (MQ=60)
CGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTG > SRR4302535.1006254/1‑94 (MQ=60)
CAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGC > SRR4302535.3016922/1‑94 (MQ=60)
AATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCG > SRR4302535.4713449/1‑94 (MQ=60)
ATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGA > SRR4302535.383411/1‑94 (MQ=60)
TGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAC < SRR4302535.3199871/94‑1 (MQ=60)
TGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAC > SRR4302535.3849331/1‑94 (MQ=60)
ATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCA < SRR4302535.3630529/94‑1 (MQ=60)
CGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAA > SRR4302535.2893442/1‑94 (MQ=60)
ATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAAC > SRR4302535.2401475/1‑94 (MQ=60)
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TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACC > NC_000913/4518969‑4519153
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
