Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,519,062	A→G	I176T (ATA→ACA)	yjhF ←	putative transport system permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,519,062	0	A	G	100.0%	1018.0 / NA	316	I176T (ATA→ACA)	yjhF	putative transport system permease
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (156/160); total (156/160)

Only 100 of 329 total aligned reads displayed.

TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA  >  NC_000913/4518972‑4519151

ttAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTc                                                                                         <  1:4818157/93‑1 (MQ=255)

 tAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCa                                                                                        >  1:1104496/1‑93 (MQ=255)

 tAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCa                                                                                        <  1:5507904/93‑1 (MQ=255)

  aaaGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAg                                                                                       >  2:4889906/1‑93 (MQ=255)

  aaaGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAg                                                                                       >  2:5724175/1‑93 (MQ=255)

   aaGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGt                                                                                      <  2:1356645/93‑1 (MQ=255)

    aGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTa                                                                                     <  1:5897772/93‑1 (MQ=255)

     ggCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGTAATGCCGACAATGATACCGTATGTCAGTAc                                                                                    <  1:3676874/93‑1 (MQ=255)

        gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCaa                                                                                 <  1:1793654/93‑1 (MQ=255)

        gTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCaa                                                                                 >  2:3658921/1‑93 (MQ=255)

         tCCGGAATAATGCGCTGGCAGCATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAt                                                                                >  2:4314701/1‑93 (MQ=255)

         tCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAACAAt                                                                                >  1:2390663/1‑93 (MQ=255)

           cGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATcc                                                                              <  1:5467483/93‑1 (MQ=255)

            ggAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCt                                                                             >  2:6496559/1‑93 (MQ=255)

             gAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTa                                                                            >  1:4904477/1‑93 (MQ=255)

             gAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTa                                                                            >  2:273302/1‑93 (MQ=255)

             gAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTa                                                                            >  1:260018/1‑93 (MQ=255)

             gAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTa                                                                            >  2:690212/1‑93 (MQ=255)

             gAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTa                                                                            <  2:7384103/93‑1 (MQ=255)

               ataatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACa                                                                          >  1:249815/1‑93 (MQ=255)

                taatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAt                                                                         <  2:2193388/93‑1 (MQ=255)

                taatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAt                                                                         >  2:185540/1‑93 (MQ=255)

                taatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAt                                                                         <  1:4386894/93‑1 (MQ=255)

                 aatGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATc                                                                        <  1:2568242/93‑1 (MQ=255)

                  atGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCa                                                                       <  2:458656/93‑1 (MQ=255)

                   tGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAg                                                                      >  1:6899094/1‑93 (MQ=255)

                    gcgcTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAgc                                                                     <  2:5921403/93‑1 (MQ=255)

                    gcgcTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAgc                                                                     <  2:446019/93‑1 (MQ=255)

                       cTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGcc                                                                  <  1:6229688/93‑1 (MQ=255)

                       cTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGcc                                                                  >  2:1222911/1‑93 (MQ=255)

                       cTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGcc                                                                  >  1:3841096/1‑93 (MQ=255)

                        tgtcAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATTCCGTATGTCAGTACCAATCCTACATCAGCGCCa                                                                 <  2:3725611/90‑1 (MQ=255)

                         ggCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCat                                                                >  2:2311191/1‑93 (MQ=255)

                         ggCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCat                                                                >  1:6750306/1‑93 (MQ=255)

                           cAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCatat                                                              <  1:4945832/93‑1 (MQ=255)

                           cAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCatat                                                              >  2:6738405/1‑93 (MQ=255)

                           cAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCatat                                                              <  2:7461679/93‑1 (MQ=255)

                            aGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAtt                                                             >  2:4541699/1‑93 (MQ=255)

                             gAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTc                                                            <  2:3478428/93‑1 (MQ=255)

                             gAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTc                                                            >  2:492121/1‑93 (MQ=255)

                             gAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTc                                                            >  2:5056829/1‑93 (MQ=255)

                              aaTTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTcc                                                           >  1:3319543/1‑93 (MQ=255)

                                tttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCt                                                         >  2:3986050/1‑93 (MQ=255)

                                tttATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCt                                                         <  1:3503422/93‑1 (MQ=255)

                                  tATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTgg                                                       >  1:276049/1‑93 (MQ=255)

                                       aaTACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATa                                                  <  1:902247/93‑1 (MQ=255)

                                        aTACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATaa                                                 <  2:1151230/93‑1 (MQ=255)

                                         tACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAc                                                <  2:6354996/93‑1 (MQ=255)

                                         tACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAc                                                <  1:6603897/93‑1 (MQ=255)

                                          aCCGGGCCGCAAAGAATAAAGTTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACa                                               >  1:1411678/1‑93 (MQ=255)

                                           ccGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAg                                              <  1:4619426/93‑1 (MQ=255)

                                           ccGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAg                                              <  2:7763198/93‑1 (MQ=255)

                                            cGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGt                                             >  1:5862891/1‑93 (MQ=255)

                                             gggCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTc                                            >  1:7259171/1‑93 (MQ=255)

                                             gggCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTc                                            <  2:3104259/93‑1 (MQ=255)

                                             gggCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTc                                            >  1:2110975/1‑93 (MQ=255)

                                              ggCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCg                                           >  1:3086912/1‑93 (MQ=255)

                                               gCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCgg                                          <  2:7422841/93‑1 (MQ=255)

                                                 cGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGc                                        <  1:4011002/93‑1 (MQ=255)

                                                 cGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGc                                        >  2:2978372/1‑93 (MQ=255)

                                                  gCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGcc                                       >  2:7924738/1‑93 (MQ=255)

                                                  gCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGcc                                       <  2:4147425/93‑1 (MQ=255)

                                                   cAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCg                                      >  1:6517615/1‑93 (MQ=255)

                                                    aaaGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCgg                                     <  1:3594371/93‑1 (MQ=255)

                                                      aGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCgggg                                   >  2:6566819/1‑93 (MQ=255)

                                                      aGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCgggg                                   <  1:1002242/93‑1 (MQ=255)

                                                      aGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCgggg                                   <  1:6990211/93‑1 (MQ=255)

                                                       gAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGt                                  >  2:6248913/1‑93 (MQ=255)

                                                       gAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGt                                  >  1:980632/1‑93 (MQ=255)

                                                       aaaTAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGt                                  <  2:3213688/92‑1 (MQ=255)

                                                        aaTAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTg                                 >  1:198583/1‑93 (MQ=255)

                                                          tAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgcg                               >  2:6171557/1‑93 (MQ=255)

                                                           aaaGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgcgg                              >  1:7828065/1‑93 (MQ=255)

                                                            aaGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTgcggc                             >  2:7031822/1‑93 (MQ=255)

                                                              ggTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGcggcgg                           >  1:5975347/1‑93 (MQ=255)

                                                              ggTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGcggcgg                           >  2:2421757/1‑93 (MQ=255)

                                                               gTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCggcggc                          >  2:1243686/1‑93 (MQ=255)

                                                               gTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCggcggc                          >  2:880609/1‑93 (MQ=255)

                                                               gTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCggcggc                          >  1:512130/1‑93 (MQ=255)

                                                                 tGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaa                        >  2:5391361/1‑93 (MQ=255)

                                                                  ggAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCaaa                       >  1:557980/1‑93 (MQ=255)

                                                                      tGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAc                   <  2:7251167/93‑1 (MQ=255)

                                                                        ccGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCg                 <  2:4248976/93‑1 (MQ=255)

                                                                         cGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgt                <  2:2007553/93‑1 (MQ=255)

                                                                          gACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtg               <  1:3166352/93‑1 (MQ=255)

                                                                          gACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtg               <  1:6637116/93‑1 (MQ=255)

                                                                           aCAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtgt              <  1:1493776/93‑1 (MQ=255)

                                                                           aCAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCgtgg              >  1:3015595/1‑92 (MQ=255)

                                                                             aaTGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGTCCGGGGTGCGGCGGCAAAAAACCGTGTGc            <  1:7469428/93‑1 (MQ=255)

                                                                             aaTGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGc            <  1:4184509/93‑1 (MQ=255)

                                                                             aaTGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGc            <  1:1333680/93‑1 (MQ=255)

                                                                               tGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGa          >  2:5321121/1‑93 (MQ=255)

                                                                                gATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAc         >  1:428876/1‑93 (MQ=255)

                                                                                gATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAc         >  2:7666059/1‑93 (MQ=255)

                                                                                 aTACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAcc        >  2:1699102/1‑93 (MQ=255)

                                                                                   aCCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCTGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAg      >  1:7606746/1‑93 (MQ=255)

                                                                                   aCCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAg      <  1:6336699/93‑1 (MQ=255)

                                                                                       tatgTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaaa  >  2:5580958/1‑93 (MQ=255)

                                                                                       tatgTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaaa  <  1:4541700/93‑1 (MQ=255)

                                                                                       tatgTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCaaa  <  1:112834/93‑1 (MQ=255)

TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA  >  NC_000913/4518972‑4519151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACCAG  >  NC_000913/4518969‑4519155

TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATG                                                                                               <  SRR4302543.6852333/94‑1 (MQ=60)

TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATG                                                                                               <  SRR4302543.7506398/94‑1 (MQ=60)

TTTGTAAAGGCGGCCTAAATGATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATG                                                                                               <  SRR4302543.5130923/94‑1 (MQ=60)

 TTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGT                                                                                              >  SRR4302543.6691371/1‑94 (MQ=60)

   TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCA                                                                                            <  SRR4302543.6681885/94‑1 (MQ=60)

   TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCA                                                                                            <  SRR4302543.5062519/94‑1 (MQ=60)

   TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCA                                                                                            <  SRR4302543.4862153/94‑1 (MQ=60)

   TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCA                                                                                            >  SRR4302543.1120918/1‑94 (MQ=60)

   TTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCA                                                                                            >  SRR4302543.1114454/1‑94 (MQ=60)

    TAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAG                                                                                           <  SRR4302543.5557908/94‑1 (MQ=60)

     AAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGT                                                                                          <  SRR4302543.1349468/94‑1 (MQ=60)

     AAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGT                                                                                          <  SRR4302543.1349469/94‑1 (MQ=60)

      AAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTA                                                                                         <  SRR4302543.7716090/94‑1 (MQ=60)

      AAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTA                                                                                         >  SRR4302543.3096824/1‑94 (MQ=60)

       AGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAC                                                                                        >  SRR4302543.6856167/1‑94 (MQ=60)

       AGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAC                                                                                        <  SRR4302543.5951566/94‑1 (MQ=60)

        GGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGTAATGCCGACAATGATACCGTATGTCAGTACC                                                                                       <  SRR4302543.3709167/94‑1 (MQ=60)

        GGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACC                                                                                       <  SRR4302543.4566357/94‑1 (MQ=60)

        GGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACC                                                                                       <  SRR4302543.4976644/94‑1 (MQ=60)

         GCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCA                                                                                      >  SRR4302543.2511604/1‑94 (MQ=60)

          CGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAT                                                                                     >  SRR4302543.5904441/1‑94 (MQ=60)

          CGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAA                                                                                     <  SRR4302543.5500812/94‑1 (MQ=60)

           GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAT                                                                                    <  SRR4302543.1809700/94‑1 (MQ=60)

           GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAT                                                                                    >  SRR4302543.4608934/1‑94 (MQ=60)

           GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAAT                                                                                    <  SRR4302543.7502028/94‑1 (MQ=60)

           GTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTAACAAT                                                                                    >  SRR4302543.2412297/1‑94 (MQ=60)

            TCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATC                                                                                   <  SRR4302543.3266322/94‑1 (MQ=60)

             CCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCC                                                                                  >  SRR4302543.4627119/1‑94 (MQ=60)

              CGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCT                                                                                 <  SRR4302543.5517018/94‑1 (MQ=60)

              CGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCT                                                                                 >  SRR4302543.595043/1‑94 (MQ=60)

              CGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCT                                                                                 >  SRR4302543.5748409/1‑94 (MQ=60)

               GGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTGTGTCAGTACCAATCCTA                                                                                <  SRR4302543.2903220/94‑1 (MQ=60)

               GGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTA                                                                                >  SRR4302543.4949178/1‑94 (MQ=60)

               GGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTA                                                                                >  SRR4302543.262294/1‑94 (MQ=60)

               GGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGAAATCCGGCAAATGATACCGTATGCCAGTACAAATCCTA                                                                                >  SRR4302543.2816470/1‑94 (MQ=60)

                GAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTAC                                                                               >  SRR4302543.1767854/1‑94 (MQ=60)

                 AATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACA                                                                              >  SRR4302543.251987/1‑94 (MQ=60)

                  ATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACAT                                                                             <  SRR4302543.5567505/94‑1 (MQ=60)

                   TAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATC                                                                            <  SRR4302543.3229304/94‑1 (MQ=60)

                   TAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATC                                                                            <  SRR4302543.4426670/94‑1 (MQ=60)

                    AATGCGCTGGCAGAATTTATTCAATACCGGTCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA                                                                           <  SRR4302543.2591689/94‑1 (MQ=60)

                    AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA                                                                           <  SRR4302543.6888138/94‑1 (MQ=60)

                    AATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCA                                                                           <  SRR4302543.2591688/94‑1 (MQ=60)

                     ATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAG                                                                          >  SRR4302543.6963927/1‑94 (MQ=60)

                     ATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAG                                                                          <  SRR4302543.5276347/94‑1 (MQ=60)

                      TGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGC                                                                         <  SRR4302543.5470267/94‑1 (MQ=60)

                       GCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCG                                                                        <  SRR4302543.5672457/94‑1 (MQ=60)

                         GCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCC                                                                      >  SRR4302543.3875008/1‑94 (MQ=60)

                         GCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCC                                                                      >  SRR4302543.5956971/1‑94 (MQ=60)

                          CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCA                                                                     >  SRR4302543.5545297/1‑94 (MQ=60)

                          CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCA                                                                     >  SRR4302543.5520171/1‑94 (MQ=60)

                          CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCA                                                                     <  SRR4302543.6288489/94‑1 (MQ=60)

                          CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCA                                                                     >  SRR4302543.5098295/1‑94 (MQ=60)

                          CTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGATGGAATGCCGACAATGATACCGTATGTCAGTACCCATCCTACATCAGCGCCA                                                                     >  SRR4302543.707243/1‑94 (MQ=60)

                           TGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCAT                                                                    >  SRR4302543.6814053/1‑94 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.1236471/94‑1 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.3734348/94‑1 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.1466184/94‑1 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.760543/94‑1 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.4940412/94‑1 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  >  SRR4302543.3068106/1‑94 (MQ=60)

                             GCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATAT                                                                  <  SRR4302543.6999579/94‑1 (MQ=60)

                              CAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATT                                                                 <  SRR4302543.4990875/94‑1 (MQ=60)

                              CAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATT                                                                 <  SRR4302543.1304957/94‑1 (MQ=60)

                               AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC                                                                <  SRR4302543.6301476/94‑1 (MQ=60)

                               AGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTC                                                                >  SRR4302543.2320494/1‑94 (MQ=60)

                                GAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCC                                                               >  SRR4302543.3349501/1‑94 (MQ=60)

                                 AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCC                                                              <  SRR4302543.3498366/94‑1 (MQ=60)

                                 AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCC                                                              <  SRR4302543.6216918/94‑1 (MQ=60)

                                 AATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCGACATCAGCACCATATTCCC                                                              >  SRR4302543.642521/1‑94 (MQ=60)

                                  ATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCT                                                             <  SRR4302543.3421316/94‑1 (MQ=60)

                                  ATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCT                                                             >  SRR4302543.1018447/1‑94 (MQ=60)

                                   TTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTG                                                            <  SRR4302543.3656731/94‑1 (MQ=60)

                                   TTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTG                                                            <  SRR4302543.3534747/94‑1 (MQ=60)

                                   TTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTG                                                            <  SRR4302543.7774741/94‑1 (MQ=60)

                                    TTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGG                                                           >  SRR4302543.278487/1‑94 (MQ=60)

                                     TATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGC                                                          >  SRR4302543.6710510/1‑94 (MQ=60)

                                      ATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCG                                                         >  SRR4302543.2553415/1‑94 (MQ=60)

                                      ATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCG                                                         >  SRR4302543.593157/1‑94 (MQ=60)

                                      ATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCG                                                         >  SRR4302543.4298672/1‑94 (MQ=60)

                                        TCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGAT                                                       <  SRR4302543.954906/94‑1 (MQ=60)

                                         CAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATA                                                      <  SRR4302543.6807765/94‑1 (MQ=60)

                                          AATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAA                                                     <  SRR4302543.20005/94‑1 (MQ=60)

                                          AATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAA                                                     <  SRR4302543.910201/94‑1 (MQ=60)

                                           ATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAAC                                                    >  SRR4302543.3539546/1‑94 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGTTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   >  SRR4302543.1424441/1‑94 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   <  SRR4302543.4217979/94‑1 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   <  SRR4302543.1712952/94‑1 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   <  SRR4302543.4181424/94‑1 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   <  SRR4302543.6666136/94‑1 (MQ=60)

                                            TACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACA                                                   <  SRR4302543.6666134/94‑1 (MQ=60)

                                             ACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAG                                                  <  SRR4302543.6620694/94‑1 (MQ=60)

                                              CCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGT                                                 >  SRR4302543.3556393/1‑94 (MQ=60)

                                              CCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGT                                                 <  SRR4302543.4661393/94‑1 (MQ=60)

                                              CCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGT                                                 >  SRR4302543.5916256/1‑94 (MQ=60)

                                               CGGGCCGCAAAGAGTGGAGGTTGGAATGCCGACAATGATACAGTATGTCAGTACCAATCCTACGTCAGCGCCAAATTCCCTGGCGATAACAGTC                                                <  SRR4302543.7063559/94‑1 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC                                                <  SRR4302543.2366397/94‑1 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC                                                >  SRR4302543.2129872/1‑94 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC                                                >  SRR4302543.7329329/1‑94 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC                                                <  SRR4302543.897634/94‑1 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTC                                                <  SRR4302543.193505/94‑1 (MQ=60)

                                               CGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCAATATTCCCTGGCGATAACAGTC                                                <  SRR4302543.1411508/94‑1 (MQ=60)

                                                GGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCG                                               >  SRR4302543.3114671/1‑94 (MQ=60)

                                                GGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCG                                               >  SRR4302543.4355328/1‑94 (MQ=60)

                                                GGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCG                                               <  SRR4302543.605926/94‑1 (MQ=60)

                                                 GGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGG                                              <  SRR4302543.6685098/94‑1 (MQ=60)

                                                 GGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGG                                              <  SRR4302543.4566687/94‑1 (MQ=60)

                                                 GGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGG                                              <  SRR4302543.822871/94‑1 (MQ=60)

                                                  GCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGG                                             <  SRR4302543.4280038/94‑1 (MQ=60)

                                                    CGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCC                                           >  SRR4302543.4009297/1‑94 (MQ=60)

                                                    CGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCC                                           <  SRR4302543.4046809/94‑1 (MQ=60)

                                                    CGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCC                                           >  SRR4302543.3673855/1‑94 (MQ=60)

                                                    CGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCC                                           >  SRR4302543.6371506/1‑94 (MQ=60)

                                                     GCAAAGAATAAAGGTTGGAATGCCGACAATGATCCCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCG                                          <  SRR4302543.2662275/94‑1 (MQ=60)

                                                     GCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCG                                          <  SRR4302543.2018724/94‑1 (MQ=60)

                                                     GCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCG                                          >  SRR4302543.6578994/1‑94 (MQ=60)

                                                     GCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCG                                          <  SRR4302543.7626832/94‑1 (MQ=60)

                                                      CAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGG                                         <  SRR4302543.5963628/94‑1 (MQ=60)

                                                       AAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGG                                        <  SRR4302543.3626099/94‑1 (MQ=60)

                                                       AAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGG                                        >  SRR4302543.1135869/1‑94 (MQ=60)

                                                       AAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGG                                        <  SRR4302543.106954/94‑1 (MQ=60)

                                                        AAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGG                                       >  SRR4302543.2691438/1‑94 (MQ=60)

                                                        AAGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGG                                       >  SRR4302543.4756707/1‑94 (MQ=60)

                                                         AGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGT                                      <  SRR4302543.1011096/94‑1 (MQ=60)

                                                         AGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGT                                      <  SRR4302543.7055999/94‑1 (MQ=60)

                                                         AGAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGT                                      >  SRR4302543.989287/1‑94 (MQ=60)

                                                          GAATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTG                                     >  SRR4302543.200262/1‑94 (MQ=60)

                                                            ATAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCG                                   >  SRR4302543.3192668/1‑94 (MQ=60)

                                                             TAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGG                                  >  SRR4302543.7901786/1‑94 (MQ=60)

                                                             TAAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGG                                  <  SRR4302543.7021100/94‑1 (MQ=60)

                                                              AAAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGC                                 <  SRR4302543.3441729/94‑1 (MQ=60)

                                                               AAGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCG                                <  SRR4302543.2594332/94‑1 (MQ=60)

                                                                AGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGG                               >  SRR4302543.6030077/1‑94 (MQ=60)

                                                                AGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGG                               >  SRR4302543.6030078/1‑94 (MQ=60)

                                                                AGGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGG                               >  SRR4302543.7795751/1‑94 (MQ=60)

                                                                 GGTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGC                              >  SRR4302543.516894/1‑94 (MQ=60)

                                                                  GTTGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCA                             >  SRR4302543.4989123/1‑94 (MQ=60)

                                                                    TGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAA                           >  SRR4302543.4699048/1‑94 (MQ=60)

                                                                    TGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAA                           >  SRR4302543.3180848/1‑94 (MQ=60)

                                                                    TGGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAA                           >  SRR4302543.563099/1‑94 (MQ=60)

                                                                     GGAATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAA                          <  SRR4302543.5571016/94‑1 (MQ=60)

                                                                       AATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAA                        >  SRR4302543.2092576/1‑94 (MQ=60)

                                                                        ATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAC                       >  SRR4302543.3771558/1‑94 (MQ=60)

                                                                        ATGCCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAAC                       >  SRR4302543.4879251/1‑94 (MQ=60)

                                                                           CCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGT                    <  SRR4302543.2545621/94‑1 (MQ=60)

                                                                           CCGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGT                    >  SRR4302543.2996613/1‑94 (MQ=60)

                                                                            CGACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTG                   >  SRR4302543.7001365/1‑94 (MQ=60)

                                                                            CGACAATCATACCGTATGTCAGTCCCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAACCCGTG                   <  SRR4302543.4169296/94‑1 (MQ=60)

                                                                             GACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGT                  <  SRR4302543.1902900/94‑1 (MQ=60)

                                                                             GACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGT                  <  SRR4302543.3194860/94‑1 (MQ=60)

                                                                             GACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGT                  <  SRR4302543.6699745/94‑1 (MQ=60)

                                                                             GACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGG                  >  SRR4302543.3042880/1‑94 (MQ=60)

                                                                              ACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTG                 <  SRR4302543.1507215/94‑1 (MQ=60)

                                                                              ACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTG                 <  SRR4302543.6546414/94‑1 (MQ=60)

                                                                              ACAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTG                 <  SRR4302543.439691/94‑1 (MQ=60)

                                                                               CAATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGC                >  SRR4302543.2529674/1‑94 (MQ=60)

                                                                                AATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGTCCGGGGTGCGGCGGCAAAAAACCGTGTGCG               <  SRR4302543.7540963/94‑1 (MQ=60)

                                                                                AATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCG               <  SRR4302543.1345567/94‑1 (MQ=60)

                                                                                AATGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCG               <  SRR4302543.4222435/94‑1 (MQ=60)

                                                                                  TGATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGAC             >  SRR4302543.432894/1‑94 (MQ=60)

                                                                                    ATACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCA           >  SRR4302543.3867439/1‑94 (MQ=60)

                                                                                     TACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCTGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAG          >  SRR4302543.7678968/1‑94 (MQ=60)

                                                                                      ACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGC         <  SRR4302543.2463753/94‑1 (MQ=60)

                                                                                      ACCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGC         <  SRR4302543.6396290/94‑1 (MQ=60)

                                                                                       CCGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCA        >  SRR4302543.955193/1‑94 (MQ=60)

                                                                                        CGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAA       >  SRR4302543.1482/1‑94 (MQ=60)

                                                                                        CGTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAA       >  SRR4302543.6664754/1‑94 (MQ=60)

                                                                                         GTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA      >  SRR4302543.4004550/1‑94 (MQ=60)

                                                                                         GTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA      >  SRR4302543.7479838/1‑94 (MQ=60)

                                                                                         GTATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAA      <  SRR4302543.4818021/94‑1 (MQ=60)

                                                                                          TATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAC     <  SRR4302543.113860/94‑1 (MQ=60)

                                                                                          TATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAC     >  SRR4302543.6241102/1‑94 (MQ=60)

                                                                                          TATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAC     <  SRR4302543.4583052/94‑1 (MQ=60)

                                                                                          TATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAC     <  SRR4302543.4405961/94‑1 (MQ=60)

                                                                                          TATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAAC     >  SRR4302543.2859491/1‑94 (MQ=60)

                                                                                           ATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACC    >  SRR4302543.2206971/1‑94 (MQ=60)

                                                                                           ATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACC    <  SRR4302543.4355468/94‑1 (MQ=60)

                                                                                           ATGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGAGCCCGGGTGCGGCGGCAAAAAACCGGGCGCGACCAGCAAAAC    >  SRR4302543.6857918/1‑94 (MQ=60)

                                                                                            TGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACCA   >  SRR4302543.2660738/1‑94 (MQ=60)

                                                                                            TGTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACAA   >  SRR4302543.2660737/1‑94 (MQ=60)

                                                                                             GTCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACCAG  >  SRR4302543.5449849/1‑94 (MQ=60)

TTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCTACATCAGCGCCATATTCCCTGGCGATAACAGTCGGGCCGGGGTGCGGCGGCAAAAAACCGTGTGCGACCAGCAAACCAG  >  NC_000913/4518969‑4519155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`