Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,563,909 |
A→G |
W303R (TGG→CGG) |
yjiN ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,563,909 | 0 | A | G | 100.0%
| 817.9
/ NA
| 255 | W303R (TGG→CGG) | yjiN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/150); total (105/150) |
Only 100 of 262 total aligned reads displayed.
CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT > NC_000913/4563819‑4563998
|
cAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCcgca > 1:3204418/1‑93 (MQ=255)
aaaCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCaa < 1:3970927/93‑1 (MQ=255)
aCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAtt > 1:3731345/1‑93 (MQ=255)
ccATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTc > 1:1698297/1‑93 (MQ=255)
aTTGACCCGCTCGTGCGATGCGTTCTTTCACACGATAATCTTCACTGTTGATATCCGCTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAc < 2:4479168/93‑1 (MQ=255)
ttGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACt > 2:1404798/1‑93 (MQ=255)
ttGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACt < 1:1881517/93‑1 (MQ=255)
tGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATGCACTTTCAGCCATTCCCGTAAATACCCCCGCAATTCACTg > 1:150293/1‑93 (MQ=255)
tGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTg < 1:4048905/93‑1 (MQ=255)
gACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTACATCCCCCCGCAATTCACTga > 2:3992523/1‑93 (MQ=255)
gACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTga < 1:2642064/93‑1 (MQ=255)
ccGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAt < 2:4220373/93‑1 (MQ=255)
ccGCGCGTGCGAAGCGTTCTTTCACACAATAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAt < 1:3792865/93‑1 (MQ=255)
cGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATa < 2:1114585/93‑1 (MQ=255)
cGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATa < 2:4181344/93‑1 (MQ=255)
cGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATa > 2:2599077/1‑93 (MQ=255)
cGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATa < 1:3486297/93‑1 (MQ=255)
cTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGc < 2:2660922/93‑1 (MQ=255)
cGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGa < 1:2111874/93‑1 (MQ=255)
cGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGa < 2:3705338/93‑1 (MQ=255)
gTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAt < 2:1844197/93‑1 (MQ=255)
gTGCGAGTCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAt < 2:1228534/93‑1 (MQ=255)
tGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAtt < 1:4580670/93‑1 (MQ=255)
tGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAtt > 2:1733334/1‑93 (MQ=255)
tGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAtt > 1:1424134/1‑93 (MQ=255)
tGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAtt > 1:647283/1‑93 (MQ=255)
tGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAtt < 2:3373761/93‑1 (MQ=255)
gCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTa > 1:3889252/1‑93 (MQ=255)
gCGATGAGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTa < 2:2921208/93‑1 (MQ=255)
cGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaa < 2:3288036/93‑1 (MQ=255)
aTGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaaa > 2:2580381/1‑93 (MQ=255)
tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCACTTCACTGAGATAGCGATTAAAAg > 1:3129064/1‑93 (MQ=255)
tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAg < 2:4303140/93‑1 (MQ=255)
tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAg > 2:2230707/1‑93 (MQ=255)
gCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGc < 1:3628279/93‑1 (MQ=255)
gCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGc < 1:604110/93‑1 (MQ=255)
gCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGc > 1:2008196/1‑93 (MQ=255)
gCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGc < 1:1035970/93‑1 (MQ=255)
cGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCt < 2:1287935/93‑1 (MQ=255)
gTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt < 1:1722082/93‑1 (MQ=255)
gTTCTTTCACACCAGAATCTTCACTGTTGATATCCACTTTCAGACATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt > 2:3103590/1‑93 (MQ=255)
cTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAt > 2:2824706/1‑93 (MQ=255)
cTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAt < 2:3846492/93‑1 (MQ=255)
cTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAt > 1:1975616/1‑93 (MQ=255)
tttCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtc < 1:1641225/93‑1 (MQ=255)
tCACACGAGAATCTTCACTGTTGATATCCCCTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtctt < 1:4174292/93‑1 (MQ=255)
tCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtctt < 1:974165/93‑1 (MQ=255)
cacaCGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtcttc < 2:1955418/93‑1 (MQ=255)
cacaCGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtcttc < 1:127782/93‑1 (MQ=255)
cacaCGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtcttc < 1:3452183/93‑1 (MQ=255)
acacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtcttct > 1:3228222/1‑93 (MQ=255)
cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt > 2:4401119/1‑93 (MQ=255)
cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt < 1:2494449/93‑1 (MQ=255)
cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt < 2:1919827/93‑1 (MQ=255)
cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt < 1:3980579/93‑1 (MQ=255)
cGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTc < 1:450635/93‑1 (MQ=255)
cGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTc < 1:1086359/93‑1 (MQ=255)
gaATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGa < 1:3525808/93‑1 (MQ=255)
aaTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAt < 2:3933394/93‑1 (MQ=255)
aTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATa < 2:3510424/93‑1 (MQ=255)
tCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAg < 1:3019483/93‑1 (MQ=255)
cACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCttt < 2:601470/93‑1 (MQ=255)
aCTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCtttt > 2:1666121/1‑93 (MQ=255)
cTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCttttt < 1:181503/93‑1 (MQ=255)
tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa < 1:525757/93‑1 (MQ=255)
tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa > 2:1892800/1‑93 (MQ=255)
gTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAc < 2:3080559/93‑1 (MQ=255)
gTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAc < 2:2765199/93‑1 (MQ=255)
gTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAc < 1:3403547/93‑1 (MQ=255)
ttGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACg < 1:881200/93‑1 (MQ=255)
tGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACgg < 2:4624756/93‑1 (MQ=255)
gATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGc > 2:733007/1‑93 (MQ=255)
atatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCa < 1:8004/93‑1 (MQ=255)
tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAt < 1:1385207/93‑1 (MQ=255)
tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAt < 1:4086737/93‑1 (MQ=255)
tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAt < 1:2773282/93‑1 (MQ=255)
tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACAGCAt > 2:1481882/1‑93 (MQ=255)
atCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATc < 2:248236/93‑1 (MQ=255)
atCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATc < 1:3257276/93‑1 (MQ=255)
ccACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCgg > 2:2006513/1‑93 (MQ=255)
ccTTTCAGCCCTTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCt < 1:1013046/92‑1 (MQ=255)
cAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTcctcc > 1:293489/1‑89 (MQ=255)
cgCCATTCACGTAAATCCCCCCTCAATTCACTGAGATAGCGATTAAAAGCTTCAGCTTCTTTCAGAAAGCTTTTTACGGCATCGGCTCgcgcg < 2:2941980/92‑2 (MQ=255)
gCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTTATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTg > 2:3677242/1‑93 (MQ=255)
gCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCgcgccg > 1:377718/1‑91 (MQ=255)
gCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTg > 1:2562573/1‑93 (MQ=255)
ccATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGc < 1:502919/93‑1 (MQ=255)
cATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCgccgcc > 2:820448/1‑93 (MQ=255)
cATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCgccgcc > 1:3671249/1‑93 (MQ=255)
aTTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCa < 1:1764297/93‑1 (MQ=255)
ttCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAt < 1:3313043/93‑1 (MQ=255)
ccGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTc > 1:3143782/1‑93 (MQ=255)
ccGAAAACCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTc < 2:3552782/93‑1 (MQ=255)
cGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTcc < 1:4647960/93‑1 (MQ=255)
cGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTcc < 2:484063/93‑1 (MQ=255)
cGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTcc < 2:880034/93‑1 (MQ=255)
tAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCgg < 1:4297518/93‑1 (MQ=255)
tAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCCGCCATTTCCgg > 1:228137/1‑93 (MQ=255)
aTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATc > 1:4435608/1‑93 (MQ=255)
cccGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGtttt < 1:4349304/93‑1 (MQ=255)
|
CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT > NC_000913/4563819‑4563998
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG > NC_000913/4563816‑4564002
|
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCG < SRR4302535.916262/94‑1 (MQ=60)
CCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCA > SRR4302535.3226609/1‑94 (MQ=60)
CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAA > SRR4302535.1885328/1‑94 (MQ=60)
AAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAT > SRR4302535.4644453/1‑94 (MQ=60)
AAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAT < SRR4302535.3998050/94‑1 (MQ=60)
AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT > SRR4302535.3880672/1‑94 (MQ=60)
AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT > SRR4302535.3757183/1‑94 (MQ=60)
AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT < SRR4302535.2793613/94‑1 (MQ=60)
ACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTC > SRR4302535.1710570/1‑94 (MQ=60)
CCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCA > SRR4302535.3935389/1‑94 (MQ=60)
CATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAC > SRR4302535.3759003/1‑94 (MQ=60)
CATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAC > SRR4302535.3001727/1‑94 (MQ=60)
CATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAC > SRR4302535.1720653/1‑94 (MQ=60)
ATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT < SRR4302535.785332/94‑1 (MQ=60)
TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATGCACTTTCAGCCATTCCCGTAAATACCCCCGCAATTCACTG > SRR4302535.151341/1‑94 (MQ=60)
TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG > SRR4302535.4348333/1‑94 (MQ=60)
TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG < SRR4302535.1895079/94‑1 (MQ=60)
TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG > SRR4302535.1525779/1‑94 (MQ=60)
TGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGA < SRR4302535.4076623/94‑1 (MQ=60)
GACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAG < SRR4302535.2660986/94‑1 (MQ=60)
GACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAG < SRR4302535.2124073/94‑1 (MQ=60)
CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT > SRR4302535.330822/1‑94 (MQ=60)
CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT < SRR4302535.2403266/94‑1 (MQ=60)
CCCGCTCGTGCGATGCGCTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT < SRR4302535.1402090/94‑1 (MQ=60)
CCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATA > SRR4302535.4707245/1‑94 (MQ=60)
CCGCGCGTGCGAAGCGTTCTTTCACACAATAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATA < SRR4302535.3819014/94‑1 (MQ=60)
CGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCATTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG < SRR4302535.2535196/94‑1 (MQ=60)
CGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG < SRR4302535.3510501/94‑1 (MQ=60)
CGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG < SRR4302535.1901722/94‑1 (MQ=60)
GCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGC < SRR4302535.3998955/94‑1 (MQ=60)
GCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGC < SRR4302535.4114545/94‑1 (MQ=60)
CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG > SRR4302535.3816202/1‑94 (MQ=60)
CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT < SRR4302535.2127118/94‑1 (MQ=60)
CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACATTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT > SRR4302535.1729222/1‑94 (MQ=60)
GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT < SRR4302535.2901944/94‑1 (MQ=60)
GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT > SRR4302535.1434303/1‑94 (MQ=60)
GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT > SRR4302535.651794/1‑94 (MQ=60)
TGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTA < SRR4302535.4611867/94‑1 (MQ=60)
TGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTA < SRR4302535.2723321/94‑1 (MQ=60)
TGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTA > SRR4302535.3915920/1‑94 (MQ=60)
TGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTA < SRR4302535.2312980/94‑1 (MQ=60)
ATGCGTTCTTTCACACGAGATTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAG < SRR4302535.3149134/94‑1 (MQ=60)
ATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCACTTCACTGAGATAGCGATTAAAAG > SRR4302535.3150855/1‑94 (MQ=60)
ATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAG < SRR4302535.3620210/94‑1 (MQ=60)
TGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGT > SRR4302535.509638/1‑94 (MQ=60)
TGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGC > SRR4302535.2022659/1‑94 (MQ=60)
GCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCT < SRR4302535.608338/94‑1 (MQ=60)
GCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCT < SRR4302535.1043327/94‑1 (MQ=60)
GCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCT < SRR4302535.3653425/94‑1 (MQ=60)
CGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTT > SRR4302535.2768230/1‑94 (MQ=60)
GTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTC < SRR4302535.1734538/94‑1 (MQ=60)
GTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTC > SRR4302535.792185/1‑94 (MQ=60)
TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT > SRR4302535.3838941/1‑94 (MQ=60)
TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT < SRR4302535.4107556/94‑1 (MQ=60)
TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT > SRR4302535.1989846/1‑94 (MQ=60)
TTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCT < SRR4302535.1653087/94‑1 (MQ=60)
TTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTT < SRR4302535.4540889/94‑1 (MQ=60)
TTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTT < SRR4302535.916521/94‑1 (MQ=60)
TCACACGAGAATCTTCACTGTTGATATCCCCTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTC < SRR4302535.4202863/94‑1 (MQ=60)
TCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTC < SRR4302535.981080/94‑1 (MQ=60)
TCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTC < SRR4302535.342846/94‑1 (MQ=60)
CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT < SRR4302535.128685/94‑1 (MQ=60)
CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT < SRR4302535.3283399/94‑1 (MQ=60)
CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT < SRR4302535.3476178/94‑1 (MQ=60)
CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT > SRR4302535.3250594/1‑94 (MQ=60)
ACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTT > SRR4302535.118864/1‑94 (MQ=60)
ACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTT < SRR4302535.314157/94‑1 (MQ=60)
ACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTT < SRR4302535.882466/94‑1 (MQ=60)
CACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTT < SRR4302535.4007773/94‑1 (MQ=60)
CACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTT < SRR4302535.2512448/94‑1 (MQ=60)
CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCACTTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA > SRR4302535.1668883/1‑94 (MQ=60)
CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA < SRR4302535.453790/94‑1 (MQ=60)
CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA < SRR4302535.1094082/94‑1 (MQ=60)
CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA < SRR4302535.3346543/94‑1 (MQ=60)
GAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAG < SRR4302535.1741826/94‑1 (MQ=60)
AGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGA > SRR4302535.1044203/1‑94 (MQ=60)
AGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGA < SRR4302535.4499629/94‑1 (MQ=60)
AGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGA > SRR4302535.643855/1‑94 (MQ=60)
GAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAT < SRR4302535.4398633/94‑1 (MQ=60)
GAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAT < SRR4302535.3550290/94‑1 (MQ=60)
ATCTTCACTGTTGATATCCACTTCCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG > SRR4302535.3234046/1‑94 (MQ=60)
TCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGC < SRR4302535.3162550/94‑1 (MQ=60)
TCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGC < SRR4302535.3040631/94‑1 (MQ=60)
CTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCT > SRR4302535.3729018/1‑94 (MQ=60)
CTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCT < SRR4302535.4021945/94‑1 (MQ=60)
TCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTT > SRR4302535.3673909/1‑94 (MQ=60)
CACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTT > SRR4302535.828911/1‑94 (MQ=60)
ACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTT < SRR4302535.3693981/94‑1 (MQ=60)
CTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTA < SRR4302535.182761/94‑1 (MQ=60)
TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC > SRR4302535.3508486/1‑94 (MQ=60)
TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC < SRR4302535.3508176/94‑1 (MQ=60)
TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC < SRR4302535.4134824/94‑1 (MQ=60)
TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC < SRR4302535.529428/94‑1 (MQ=60)
GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG < SRR4302535.3427235/94‑1 (MQ=60)
GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG < SRR4302535.257988/94‑1 (MQ=60)
TTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGG < SRR4302535.887439/94‑1 (MQ=60)
ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT > SRR4302535.3273091/1‑94 (MQ=60)
ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT < SRR4302535.1058272/94‑1 (MQ=60)
ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT > SRR4302535.1743795/1‑94 (MQ=60)
ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT < SRR4302535.8069/94‑1 (MQ=60)
TATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATC < SRR4302535.4114698/94‑1 (MQ=60)
TATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATC < SRR4302535.2793028/94‑1 (MQ=60)
TATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATC < SRR4302535.1395093/94‑1 (MQ=60)
ATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCG < SRR4302535.3279910/94‑1 (MQ=60)
CCTCTTTCAGCCATTCCCGTAAACCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGC < SRR4302535.1804998/94‑1 (MQ=60)
CCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGC > SRR4302535.4404473/1‑94 (MQ=60)
CACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCT < SRR4302535.1535397/94‑1 (MQ=60)
CACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCT > SRR4302535.1490813/1‑94 (MQ=60)
CCTTTCAGCCCTTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTC < SRR4302535.1020251/94‑1 (MQ=60)
CTTTCAGCCAATCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCTGCTCG > SRR4302535.4713851/1‑94 (MQ=60)
TTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCccc > SRR4302535.4208705/1‑91 (MQ=60)
TTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCG > SRR4302535.3201276/1‑94 (MQ=60)
TCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCctcc > SRR4302535.295540/1‑90 (MQ=60)
CAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCccc > SRR4302535.1025852/1‑91 (MQ=60)
CAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCT < SRR4302535.1376800/94‑1 (MQ=60)
CAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCT < SRR4302535.583482/94‑1 (MQ=60)
AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG > SRR4302535.1346086/1‑94 (MQ=60)
AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG > SRR4302535.2581019/1‑94 (MQ=60)
AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCCG > SRR4302535.380337/1‑94 (MQ=60)
CCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCC < SRR4302535.506435/94‑1 (MQ=60)
CCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCCGCC > SRR4302535.3696674/1‑94 (MQ=60)
ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAT > SRR4302535.594393/1‑94 (MQ=60)
ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAT < SRR4302535.1777084/94‑1 (MQ=60)
TTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATT < SRR4302535.3336095/94‑1 (MQ=60)
TTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATT < SRR4302535.2042450/94‑1 (MQ=60)
TCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTT < SRR4302535.2001945/94‑1 (MQ=60)
TCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTT < SRR4302535.4613194/94‑1 (MQ=60)
TCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCCCTGCCACTT > SRR4302535.3446292/1‑94 (MQ=60)
CCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTC > SRR4302535.3165651/1‑94 (MQ=60)
CCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTC > SRR4302535.1401108/1‑94 (MQ=60)
CGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCG < SRR4302535.4679444/94‑1 (MQ=60)
GTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGG < SRR4302535.1830825/94‑1 (MQ=60)
GTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGG > SRR4302535.3546731/1‑94 (MQ=60)
GTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCCGCCATTTCCGG > SRR4302535.229709/1‑94 (MQ=60)
TAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTTCCGGA > SRR4302535.2289365/1‑94 (MQ=60)
TAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGA < SRR4302535.4326929/94‑1 (MQ=60)
ACTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATC < SRR4302535.4471585/94‑1 (MQ=60)
AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTTCCGGGTC > SRR4302535.1925583/1‑94 (MQ=60)
AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTTCCCGATC > SRR4302535.2609584/1‑94 (MQ=60)
AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATC > SRR4302535.4466008/1‑94 (MQ=60)
ATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCG < SRR4302535.4020890/94‑1 (MQ=60)
ATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCG < SRR4302535.3249028/94‑1 (MQ=60)
TCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTTCCGGATCGT > SRR4302535.4267063/1‑94 (MQ=60)
CCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTTCGGATCGTT > SRR4302535.3224189/1‑94 (MQ=60)
CCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTT < SRR4302535.3651745/94‑1 (MQ=60)
CCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCcccccgcccatttcggatcggtt > SRR4302535.3980396/1‑71 (MQ=60)
CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT < SRR4302535.3759199/94‑1 (MQ=60)
CCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGCTCGTCTTT > SRR4302535.906837/1‑94 (MQ=60)
CCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTT < SRR4302535.4379057/94‑1 (MQ=60)
CCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGCTTTTC > SRR4302535.2014404/1‑94 (MQ=60)
CGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCA < SRR4302535.2061457/94‑1 (MQ=60)
GCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG < SRR4302535.1452371/94‑1 (MQ=60)
|
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG > NC_000913/4563816‑4564002
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
