Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,563,909 A→G W303R (TGG→CGG)  yjiN ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,563,9090AG99.7% 1169.5 / ‑5.2 366W303R (TGG→CGG) yjiNhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (181/184);  total (181/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.49e-01

Only 100 of 374 total aligned reads displayed.

CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT  >  NC_000913/4563819‑4563998
                                                                                          |                                                                                         
cAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCcgca                                                                                         >  2:6502548/1‑93 (MQ=255)
cAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCcgca                                                                                         >  1:1828170/1‑93 (MQ=255)
  aaCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAt                                                                                       <  1:3888885/93‑1 (MQ=255)
  aaCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAt                                                                                       <  1:3742283/93‑1 (MQ=255)
  aaCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAt                                                                                       >  2:1130260/1‑93 (MQ=255)
   aCCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAtt                                                                                      <  1:1666906/93‑1 (MQ=255)
     cATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCa                                                                                    <  2:2065477/93‑1 (MQ=255)
     cATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCa                                                                                    >  2:3766583/1‑93 (MQ=255)
      aTTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAc                                                                                   >  2:3402671/1‑93 (MQ=255)
      aTTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAc                                                                                   <  1:3416345/93‑1 (MQ=255)
       ttGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACt                                                                                  >  1:198467/1‑93 (MQ=255)
       ttGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACt                                                                                  <  1:2546312/93‑1 (MQ=255)
         gtcccGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTga                                                                                <  1:1162666/91‑1 (MQ=255)
           cccGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTgaga                                                                              <  1:4371401/93‑1 (MQ=255)
            ccGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAt                                                                             >  1:7354911/1‑93 (MQ=255)
            ccGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAt                                                                             >  1:1080656/1‑93 (MQ=255)
              gCTCGTGCGATGCGTTCTTTCACACGAGCATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAg                                                                           >  1:1021719/1‑93 (MQ=255)
              gCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAg                                                                           >  1:2454688/1‑93 (MQ=255)
                tCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCg                                                                         >  1:1382984/1‑93 (MQ=255)
                 cGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGa                                                                        <  1:6432066/93‑1 (MQ=255)
                 cGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGa                                                                        <  1:5134122/93‑1 (MQ=255)
                  gTGCTATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAt                                                                       <  1:7269870/93‑1 (MQ=255)
                  gTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAt                                                                       >  2:1578265/1‑93 (MQ=255)
                  gTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAt                                                                       <  2:4222397/93‑1 (MQ=255)
                      gATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaa                                                                   <  1:4525201/93‑1 (MQ=255)
                      gATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaa                                                                   >  2:322612/1‑93 (MQ=255)
                      gATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaa                                                                   <  2:7616701/93‑1 (MQ=255)
                       aTGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaaa                                                                  <  1:122942/93‑1 (MQ=255)
                       aTGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTaaaa                                                                  >  1:7731762/1‑93 (MQ=255)
                        tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAg                                                                 >  2:3554756/1‑93 (MQ=255)
                        tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAg                                                                 >  2:1380499/1‑93 (MQ=255)
                        tGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAg                                                                 >  1:7139255/1‑93 (MQ=255)
                           gTTCTTTCACACGAGAATCTTGACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt                                                              <  1:6302141/93‑1 (MQ=255)
                           gTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt                                                              >  2:3445857/1‑93 (MQ=255)
                           gTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt                                                              >  2:1801850/1‑93 (MQ=255)
                           gTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt                                                              >  1:3227958/1‑93 (MQ=255)
                           gTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCtt                                                              <  1:3607116/93‑1 (MQ=255)
                            ttCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTc                                                             >  1:2983311/1‑93 (MQ=255)
                             tCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCa                                                            >  2:5893208/1‑93 (MQ=255)
                               tttCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtc                                                          <  2:773182/93‑1 (MQ=255)
                               tttCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtc                                                          <  2:5667329/93‑1 (MQ=255)
                               tttCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtc                                                          <  2:3312392/93‑1 (MQ=255)
                                 tCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtctt                                                        >  2:255041/1‑93 (MQ=255)
                                 tCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAtctt                                                        <  1:7810824/93‑1 (MQ=255)
                                    cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt                                                     <  2:3952774/93‑1 (MQ=255)
                                    cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt                                                     >  1:5330327/1‑93 (MQ=255)
                                    cacGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATcttctt                                                     <  2:719885/93‑1 (MQ=255)
                                     acGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCttt                                                    <  2:5775821/93‑1 (MQ=255)
                                     acGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCttt                                                    <  2:5430554/93‑1 (MQ=255)
                                       gagaATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCa                                                  <  1:2768230/93‑1 (MQ=255)
                                       gagaATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCa                                                  >  1:3646784/1‑93 (MQ=255)
                                          aaTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAt                                               <  1:5919302/93‑1 (MQ=255)
                                          aaTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAt                                               <  2:743619/93‑1 (MQ=255)
                                          aaTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAt                                               >  1:4950691/1‑93 (MQ=255)
                                           aTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATa                                              <  1:2337782/93‑1 (MQ=255)
                                           aTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATa                                              <  2:2222931/93‑1 (MQ=255)
                                           aTCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATa                                              <  2:4490208/93‑1 (MQ=255)
                                            tCTTCGCTGTTGATATCCTCTTTCAGCCATTCCCGTAAAGCGCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAg                                             <  2:2324229/93‑1 (MQ=255)
                                             cTTCACTGTTGATATCCACTTTCAGCCATTCCTGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGc                                            <  2:5092487/93‑1 (MQ=255)
                                             cTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGc                                            <  1:5197772/93‑1 (MQ=255)
                                             cTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGc                                            <  2:3560904/93‑1 (MQ=255)
                                               tCACTGTTGATATCCACTTTCAGCCATTCACGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCtt                                          >  2:4839126/1‑93 (MQ=255)
                                                 aCTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCtttt                                        <  2:917010/93‑1 (MQ=255)
                                                 aCTGTTGATATCCACTATCCGCCCTTCCCGTAATTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCGGATAGCtttt                                        <  1:7015312/93‑1 (MQ=255)
                                                   tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa                                      <  2:2813840/93‑1 (MQ=255)
                                                   tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa                                      <  1:6709163/93‑1 (MQ=255)
                                                   tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa                                      >  1:930911/1‑93 (MQ=255)
                                                   tGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTa                                      <  2:808649/93‑1 (MQ=255)
                                                     ttGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACg                                    >  1:2070209/1‑93 (MQ=255)
                                                       gATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGc                                  >  2:133736/1‑93 (MQ=255)
                                                         tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGTTAGCTTTTTACGGCAt                                <  2:7044025/93‑1 (MQ=255)
                                                         tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAt                                >  1:6237399/1‑93 (MQ=255)
                                                         tatCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAt                                <  2:1057273/93‑1 (MQ=255)
                                                          atCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATc                               >  2:6754773/1‑93 (MQ=255)
                                                          atCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATc                               <  1:3083395/93‑1 (MQ=255)
                                                          atCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATc                               >  2:2405696/1‑93 (MQ=255)
                                                            ccACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCgg                             >  2:1905171/1‑93 (MQ=255)
                                                             cACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGc                            <  1:5453809/93‑1 (MQ=255)
                                                             cACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGc                            <  1:5037538/93‑1 (MQ=255)
                                                              aCTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCt                           >  2:2615274/1‑93 (MQ=255)
                                                               cTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTc                          >  2:4587959/1‑93 (MQ=255)
                                                                tttCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGTATCGGCTcc                         >  1:6080117/1‑92 (MQ=255)
                                                                tttCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTcc                         >  2:5011019/1‑92 (MQ=255)
                                                                  tCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTcgcg                       >  2:6972414/1‑93 (MQ=255)
                                                                    aGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCt                     <  1:5606199/93‑1 (MQ=255)
                                                                     gCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTg                    >  2:2782577/1‑93 (MQ=255)
                                                                      ccATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGc                   <  2:3100798/93‑1 (MQ=255)
                                                                       cATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGcc                  >  2:6217841/1‑93 (MQ=255)
                                                                       cATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGcc                  >  2:633512/1‑93 (MQ=255)
                                                                        aTTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGccc                 >  2:7358554/1‑92 (MQ=255)
                                                                         ttCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGccct                >  1:1438117/1‑91 (MQ=255)
                                                                          tCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAtt               <  2:6131074/93‑1 (MQ=255)
                                                                          tCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAtt               <  2:5322316/93‑1 (MQ=255)
                                                                           cccGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCttt              >  1:3521751/1‑93 (MQ=255)
                                                                            ccGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCTGCTCGCGCCGCCCttgc             >  2:2973494/1‑91 (MQ=255)
                                                                                aaaTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGa         <  2:4624525/93‑1 (MQ=255)
                                                                                 aaTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGAt        <  1:4173034/93‑1 (MQ=255)
                                                                                 aaTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGAt        <  1:4122450/93‑1 (MQ=255)
                                                                                     cccccGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGGTCggt    >  1:4625189/1‑91 (MQ=255)
                                                                                     cccccGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGtt    <  2:402807/93‑1 (MQ=255)
                                                                                          |                                                                                         
CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT  >  NC_000913/4563819‑4563998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG  >  NC_000913/4563816‑4564002
                                                                                             |                                                                                              
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTACACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCG                                                                                                <  SRR4302543.7092331/94‑1 (MQ=60)
  CCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCA                                                                                              >  SRR4302543.1844588/1‑94 (MQ=60)
   CAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAA                                                                                             >  SRR4302543.1454601/1‑94 (MQ=60)
    AAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAAT                                                                                            <  SRR4302543.4034117/94‑1 (MQ=60)
     AACCATTGGCCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCTCTTTCAGCCATACCCGTAAATCCCCCCGCAATT                                                                                           <  SRR4302543.5852720/94‑1 (MQ=60)
     AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT                                                                                           <  SRR4302543.3923219/94‑1 (MQ=60)
     AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT                                                                                           <  SRR4302543.3775202/94‑1 (MQ=60)
     AACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATT                                                                                           >  SRR4302543.3638781/1‑94 (MQ=60)
      ACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTC                                                                                          <  SRR4302543.1681834/94‑1 (MQ=60)
      ACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTC                                                                                          <  SRR4302543.5799741/94‑1 (MQ=60)
      ACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTC                                                                                          <  SRR4302543.6151461/94‑1 (MQ=60)
      ACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTC                                                                                          >  SRR4302543.7235723/1‑94 (MQ=60)
        CATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAC                                                                                        <  SRR4302543.3705669/94‑1 (MQ=60)
        CATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCAC                                                                                        >  SRR4302543.6340407/1‑94 (MQ=60)
         CTTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT                                                                                       <  SRR4302543.961911/94‑1 (MQ=60)
         ATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT                                                                                       >  SRR4302543.200144/1‑94 (MQ=60)
         ATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT                                                                                       <  SRR4302543.3446924/94‑1 (MQ=60)
         ATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT                                                                                       >  SRR4302543.234438/1‑94 (MQ=60)
         ATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACT                                                                                       <  SRR4302543.4943420/94‑1 (MQ=60)
          TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG                                                                                      <  SRR4302543.4425474/94‑1 (MQ=60)
          TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG                                                                                      <  SRR4302543.607716/94‑1 (MQ=60)
          TTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTG                                                                                      <  SRR4302543.2569538/94‑1 (MQ=60)
            GTCCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAG                                                                                    <  SRR4302543.1173251/94‑1 (MQ=60)
              CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT                                                                                  <  SRR4302543.4410990/94‑1 (MQ=60)
              CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT                                                                                  <  SRR4302543.606229/94‑1 (MQ=60)
              CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT                                                                                  >  SRR4302543.1090372/1‑94 (MQ=60)
              CCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGAT                                                                                  >  SRR4302543.7425662/1‑94 (MQ=60)
               CCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATA                                                                                 >  SRR4302543.3913055/1‑94 (MQ=60)
               CCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATA                                                                                 <  SRR4302543.4636004/94‑1 (MQ=60)
               CCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATA                                                                                 >  SRR4302543.3517720/1‑94 (MQ=60)
                CGCTCGTGCGATGCGTTCTTTCACACGAGCATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG                                                                                >  SRR4302543.1030758/1‑94 (MQ=60)
                CGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG                                                                                <  SRR4302543.130877/94‑1 (MQ=60)
                CGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAG                                                                                >  SRR4302543.2476830/1‑94 (MQ=60)
                  CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG                                                                              <  SRR4302543.7499922/94‑1 (MQ=60)
                  CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG                                                                              <  SRR4302543.7673799/94‑1 (MQ=60)
                  CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG                                                                              <  SRR4302543.3627474/94‑1 (MQ=60)
                  CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG                                                                              <  SRR4302543.7843819/94‑1 (MQ=60)
                  CTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCG                                                                              >  SRR4302543.1395427/1‑94 (MQ=60)
                    CGTGCGATGCGTTCTTTCACACGGGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT                                                                            <  SRR4302543.5463936/94‑1 (MQ=60)
                    CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT                                                                            <  SRR4302543.6492671/94‑1 (MQ=60)
                    CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT                                                                            <  SRR4302543.5180530/94‑1 (MQ=60)
                    CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT                                                                            >  SRR4302543.5232502/1‑94 (MQ=60)
                    CGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGAT                                                                            <  SRR4302543.5234442/94‑1 (MQ=60)
                     GTGCTATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           <  SRR4302543.7340103/94‑1 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.3687377/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.328729/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.7156198/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.108873/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.2467766/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.5361286/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           >  SRR4302543.5361287/1‑94 (MQ=60)
                     GTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATT                                                                           <  SRR4302543.2549438/94‑1 (MQ=60)
                      TGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTA                                                                          >  SRR4302543.5751544/1‑94 (MQ=60)
                        CGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAA                                                                        <  SRR4302543.2728806/94‑1 (MQ=60)
                        CGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAA                                                                        >  SRR4302543.5106464/1‑94 (MQ=60)
                         GATGCGTTCTTTCACTCGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAA                                                                       <  SRR4302543.7819863/94‑1 (MQ=60)
                         GATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAA                                                                       <  SRR4302543.4566373/94‑1 (MQ=60)
                         GATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAA                                                                       >  SRR4302543.7804829/1‑94 (MQ=60)
                          ATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAG                                                                      >  SRR4302543.187451/1‑94 (MQ=60)
                          ATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAG                                                                      >  SRR4302543.7208625/1‑94 (MQ=60)
                          ATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAG                                                                      <  SRR4302543.124054/94‑1 (MQ=60)
                            GCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCT                                                                    <  SRR4302543.2239135/94‑1 (MQ=60)
                            GCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCT                                                                    <  SRR4302543.7398716/94‑1 (MQ=60)
                             CGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTT                                                                   >  SRR4302543.3257144/1‑94 (MQ=60)
                              GTTCTTTCACACGAGAATCTTGACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTC                                                                  <  SRR4302543.6361439/94‑1 (MQ=60)
                              GTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTC                                                                  <  SRR4302543.3638944/94‑1 (MQ=60)
                              GTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTC                                                                  >  SRR4302543.3010401/1‑94 (MQ=60)
                               TTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCA                                                                 >  SRR4302543.5546733/1‑94 (MQ=60)
                               TTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCA                                                                 <  SRR4302543.1195458/94‑1 (MQ=60)
                                TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT                                                                <  SRR4302543.3501407/94‑1 (MQ=60)
                                TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT                                                                >  SRR4302543.5580154/1‑94 (MQ=60)
                                TCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCAT                                                                <  SRR4302543.2581188/94‑1 (MQ=60)
                                 CTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATC                                                               <  SRR4302543.5051534/94‑1 (MQ=60)
                                 CTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATC                                                               >  SRR4302543.2055960/1‑94 (MQ=60)
                                 CTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATC                                                               >  SRR4302543.2900455/1‑94 (MQ=60)
                                  TTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCT                                                              <  SRR4302543.1152581/94‑1 (MQ=60)
                                    TCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTC                                                            <  SRR4302543.7884445/94‑1 (MQ=60)
                                     CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT                                                           >  SRR4302543.5400155/1‑94 (MQ=60)
                                     CACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCT                                                           <  SRR4302543.4482380/94‑1 (MQ=60)
                                      ACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTT                                                          <  SRR4302543.4996634/94‑1 (MQ=60)
                                      ACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTT                                                          >  SRR4302543.5378531/1‑94 (MQ=60)
                                       CACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTT                                                         >  SRR4302543.3566083/1‑94 (MQ=60)
                                       CACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTT                                                         <  SRR4302543.314888/94‑1 (MQ=60)
                                       CACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTT                                                         >  SRR4302543.3943036/1‑94 (MQ=60)
                                        ACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTC                                                        <  SRR4302543.360/94‑1 (MQ=60)
                                         CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA                                                       <  SRR4302543.4285984/94‑1 (MQ=60)
                                         CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA                                                       <  SRR4302543.4285983/94‑1 (MQ=60)
                                         CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA                                                       >  SRR4302543.3678846/1‑94 (MQ=60)
                                         CGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCA                                                       <  SRR4302543.864851/94‑1 (MQ=60)
                                          GAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAG                                                      <  SRR4302543.2793418/94‑1 (MQ=60)
                                          GAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAG                                                      >  SRR4302543.2643065/1‑94 (MQ=60)
                                          GAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAG                                                      <  SRR4302543.1832090/94‑1 (MQ=60)
                                          GAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAG                                                      <  SRR4302543.1501114/94‑1 (MQ=60)
                                           AGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGA                                                     <  SRR4302543.907662/94‑1 (MQ=60)
                                            GAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAT                                                    <  SRR4302543.1440483/94‑1 (MQ=60)
                                            GAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGAT                                                    >  SRR4302543.4995778/1‑94 (MQ=60)
                                             AATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATA                                                   <  SRR4302543.4005889/94‑1 (MQ=60)
                                             AATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATA                                                   >  SRR4302543.7408839/1‑94 (MQ=60)
                                             AATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATA                                                   <  SRR4302543.5973374/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  <  SRR4302543.5366134/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  <  SRR4302543.2358994/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  <  SRR4302543.4530887/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  >  SRR4302543.6872288/1‑94 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  >  SRR4302543.3763351/1‑94 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  <  SRR4302543.181808/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  <  SRR4302543.4971052/94‑1 (MQ=60)
                                              ATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAG                                                  >  SRR4302543.3282921/1‑94 (MQ=60)
                                               TCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGC                                                 >  SRR4302543.2044019/1‑94 (MQ=60)
                                               TCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGC                                                 >  SRR4302543.1141341/1‑94 (MQ=60)
                                                CTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCT                                                <  SRR4302543.5244639/94‑1 (MQ=60)
                                                CTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCT                                                <  SRR4302543.6454895/94‑1 (MQ=60)
                                                CTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCT                                                <  SRR4302543.2421998/94‑1 (MQ=60)
                                                  TCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTT                                              >  SRR4302543.7139075/1‑94 (MQ=60)
                                                   CACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTT                                             >  SRR4302543.6658307/1‑94 (MQ=60)
                                                    ACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTT                                            <  SRR4302543.144035/94‑1 (MQ=60)
                                                    ACTGTTGATATCCACTATCCGCCCTTCCCGTAATTCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCGGATAGCTTTTT                                            <  SRR4302543.7082311/94‑1 (MQ=60)
                                                     CTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTA                                           >  SRR4302543.2394021/1‑94 (MQ=60)
                                                     CTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTA                                           >  SRR4302543.939049/1‑94 (MQ=60)
                                                      TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC                                          >  SRR4302543.1236031/1‑94 (MQ=60)
                                                      TGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTAC                                          <  SRR4302543.6772522/94‑1 (MQ=60)
                                                       GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG                                         <  SRR4302543.506902/94‑1 (MQ=60)
                                                       GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG                                         >  SRR4302543.3650161/1‑94 (MQ=60)
                                                       GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG                                         >  SRR4302543.6788295/1‑94 (MQ=60)
                                                       GTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACG                                         >  SRR4302543.2088704/1‑94 (MQ=60)
                                                        TTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGG                                        <  SRR4302543.1412464/94‑1 (MQ=60)
                                                         TGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGC                                       >  SRR4302543.2887218/1‑94 (MQ=60)
                                                         TGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGC                                       >  SRR4302543.6720863/1‑94 (MQ=60)
                                                           ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGGAT                                     >  SRR4302543.4167156/1‑94 (MQ=60)
                                                           ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT                                     >  SRR4302543.6296259/1‑94 (MQ=60)
                                                           ATATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCAT                                     >  SRR4302543.4167154/1‑94 (MQ=60)
                                                            TATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATC                                    >  SRR4302543.2036317/1‑94 (MQ=60)
                                                            TATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATC                                    <  SRR4302543.1764638/94‑1 (MQ=60)
                                                             ATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCG                                   <  SRR4302543.6381199/94‑1 (MQ=60)
                                                             ATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCG                                   >  SRR4302543.3091002/1‑94 (MQ=60)
                                                             ATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCG                                   <  SRR4302543.3111122/94‑1 (MQ=60)
                                                             ATCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCG                                   >  SRR4302543.607154/1‑94 (MQ=60)
                                                              TCCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGG                                  >  SRR4302543.7738553/1‑94 (MQ=60)
                                                               CCACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGC                                 <  SRR4302543.2346822/94‑1 (MQ=60)
                                                                CACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCT                                <  SRR4302543.5083356/94‑1 (MQ=60)
                                                                CACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCT                                <  SRR4302543.5503259/94‑1 (MQ=60)
                                                                 ACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTC                               <  SRR4302543.4903457/94‑1 (MQ=60)
                                                                 ACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTC                               >  SRR4302543.3894055/1‑94 (MQ=60)
                                                                 ACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTC                               >  SRR4302543.5100468/1‑94 (MQ=60)
                                                                 ACTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTC                               >  SRR4302543.7344703/1‑94 (MQ=60)
                                                                  CTTTCAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGTATCGGCTCC                              >  SRR4302543.6137734/1‑94 (MQ=60)
                                                                   gtgcagccctgCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGC                             <  SRR4302543.5625015/83‑1 (MQ=60)
                                                                      CAGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCT                          <  SRR4302543.4225780/94‑1 (MQ=60)
                                                                       AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG                         >  SRR4302543.1297430/1‑94 (MQ=60)
                                                                       AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG                         >  SRR4302543.6321874/1‑94 (MQ=60)
                                                                       AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG                         >  SRR4302543.6627464/1‑94 (MQ=60)
                                                                       AGCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTG                         <  SRR4302543.5657278/94‑1 (MQ=60)
                                                                        GCCATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGC                        >  SRR4302543.1992842/1‑94 (MQ=60)
                                                                          CATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCA                      <  SRR4302543.543894/94‑1 (MQ=60)
                                                                          CATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCA                      <  SRR4302543.5120720/94‑1 (MQ=60)
                                                                          CATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGATGCATCCTCTTTCAGATAGCTTTTTACAGCCTCGGCTCccgccggca                      >  SRR4302543.7767660/1‑85 (MQ=60)
                                                                           ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCT                    >  SRR4302543.1190546/1‑94 (MQ=60)
                                                                           ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAT                    <  SRR4302543.1132898/94‑1 (MQ=60)
                                                                           ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCAT                    <  SRR4302543.3345883/94‑1 (MQ=60)
                                                                           ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGCCCT                    >  SRR4302543.1451110/1‑94 (MQ=60)
                                                                           ATTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGCCCT                    >  SRR4302543.7201386/1‑94 (MQ=60)
                                                                            TTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATT                   >  SRR4302543.7810893/1‑94 (MQ=60)
                                                                            TTCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATT                   >  SRR4302543.1004890/1‑94 (MQ=60)
                                                                             TCCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTT                  >  SRR4302543.3553173/1‑94 (MQ=60)
                                                                              CCCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTC                 >  SRR4302543.3669530/1‑94 (MQ=60)
                                                                               CCGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCC                <  SRR4302543.6251120/94‑1 (MQ=60)
                                                                                CGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCG               >  SRR4302543.3057944/1‑94 (MQ=60)
                                                                                CGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCG               >  SRR4302543.3165589/1‑94 (MQ=60)
                                                                                CGTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGCCCTTTCCC               >  SRR4302543.1602793/1‑94 (MQ=60)
                                                                                CGTAAAGCCCCCCACAAATCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCG               <  SRR4302543.3895106/94‑1 (MQ=60)
                                                                                 GTAAATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGCCATTTTCCG               >  SRR4302543.3076352/1‑94 (MQ=60)
                                                                                    AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGTATCGGCTCcgggtagcacttccgggtc            >  SRR4302543.1080794/1‑75 (MQ=60)
                                                                                    AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATC           <  SRR4302543.4210821/94‑1 (MQ=60)
                                                                                    AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATC           >  SRR4302543.1080795/1‑94 (MQ=60)
                                                                                    AATCCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATC           <  SRR4302543.4159610/94‑1 (MQ=60)
                                                                                       CCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGGTCGGT        >  SRR4302543.4667211/1‑94 (MQ=60)
                                                                                       CCCCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCCGCCCATTCCGGGTCGTT        >  SRR4302543.4578895/1‑94 (MQ=60)
                                                                                         CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATTGTTTT      >  SRR4302543.6837910/1‑94 (MQ=60)
                                                                                         CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT      <  SRR4302543.6344835/94‑1 (MQ=60)
                                                                                         CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT      <  SRR4302543.7332040/94‑1 (MQ=60)
                                                                                         CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTT      <  SRR4302543.6215021/94‑1 (MQ=60)
                                                                                         CCCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCCGCCATTTCCGGATCGTTTT      >  SRR4302543.2829055/1‑94 (MQ=60)
                                                                                          CCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTT     <  SRR4302543.252213/94‑1 (MQ=60)
                                                                                          CCCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCCCGCTGCCATTTTCCGATCGTTTTT     >  SRR4302543.2599613/1‑94 (MQ=60)
                                                                                           CCGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTC    >  SRR4302543.7926123/1‑94 (MQ=60)
                                                                                            CGCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCCTTTCCGGGCCGGTTTTCA   >  SRR4302543.2964052/1‑94 (MQ=60)
                                                                                             GCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG  <  SRR4302543.3268895/94‑1 (MQ=60)
                                                                                             GCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG  <  SRR4302543.249338/94‑1 (MQ=60)
                                                                                             GCAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG  <  SRR4302543.3141632/94‑1 (MQ=60)
                                                                                             |                                                                                              
CGCCAAACCATTGACCCGCTCGTGCGATGCGTTCTTTCACACGAGAATCTTCACTGTTGATATCCACTTTCAGCCATTCCCGTAAATCCCCCCACAATTCACTGAGATAGCGATTAAAAGCTTCATCTTCTTTCAGATAGCTTTTTACGGCATCGGCTCGCGCTGCCATTTCCGGATCGTTTTTCAG  >  NC_000913/4563816‑4564002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: