Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	641,051	T→C	M14V (ATG→GTG)	ybdQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	641,051	0	T	C	100.0%	1529.3 / NA	462	M14V (ATG→GTG)	ybdQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (241/221); total (241/221)

Only 100 of 471 total aligned reads displayed.

TGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT  >  NC_000913/640962‑641140

tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTc                                                                                        <  2:7728970/93‑1 (MQ=255)

tgACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTc                                                                                        <  1:3558487/93‑1 (MQ=255)

   cccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCaaa                                                                                     <  1:6449962/93‑1 (MQ=255)

   cccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCaaa                                                                                     <  2:4275015/93‑1 (MQ=255)

   cccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCaaa                                                                                     <  2:5394521/93‑1 (MQ=255)

    ccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAAt                                                                                    >  2:1500325/1‑93 (MQ=255)

    ccGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAAt                                                                                    >  1:2428131/1‑93 (MQ=255)

     cGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATa                                                                                   <  1:3226881/93‑1 (MQ=255)

      gggTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATAc                                                                                  <  1:1615616/93‑1 (MQ=255)

      gagtagtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATAc                                                                                  <  2:6786592/91‑1 (MQ=255)

       ggTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACa                                                                                 >  2:3010564/1‑93 (MQ=255)

        gtagtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCGATTCCACTTCAAATACAt                                                                                >  2:3160607/1‑93 (MQ=255)

         tagtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATc                                                                               >  2:936623/1‑93 (MQ=255)

          agtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCa                                                                              >  2:6454914/1‑93 (MQ=255)

           gtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCaa                                                                             >  1:10024349/1‑93 (MQ=255)

           gtaCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCaa                                                                             <  2:2708326/93‑1 (MQ=255)

            taCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAAc                                                                            >  1:1528047/1‑93 (MQ=255)

             aCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACt                                                                           <  2:1281209/93‑1 (MQ=255)

             aCGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACt                                                                           >  1:6173686/1‑93 (MQ=255)

                 gAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCa                                                                       <  2:5599592/93‑1 (MQ=255)

                   aGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATa                                                                     <  2:2349330/93‑1 (MQ=255)

                    gTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATaa                                                                    >  2:6988971/1‑93 (MQ=255)

                    gTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATaa                                                                    >  1:4797719/1‑93 (MQ=255)

                     tAGATGAATAACTCCGTCATCCTGGGCGAGGCATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAAt                                                                   >  1:7452665/1‑93 (MQ=255)

                     tAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAAt                                                                   <  2:2476068/93‑1 (MQ=255)

                     tAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAAt                                                                   <  1:8462686/93‑1 (MQ=255)

                          gAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGCGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTg                                                              >  2:4119186/1‑93 (MQ=255)

                           aaTAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGt                                                             >  1:5118132/1‑93 (MQ=255)

                             tAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGGACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATCATGATTGTCt                                                           >  1:7593349/1‑93 (MQ=255)

                             tAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCt                                                           >  2:3329992/1‑93 (MQ=255)

                              accTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCtt                                                          <  2:2130205/91‑1 (MQ=255)

                               aCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTta                                                         <  1:4994818/93‑1 (MQ=255)

                               aCTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTta                                                         >  2:5867281/1‑93 (MQ=255)

                                  ccGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATTATTGTCTTATAc                                                      >  2:6575266/1‑93 (MQ=255)

                                   cGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACa                                                     <  2:6065237/93‑1 (MQ=255)

                                    gTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACAt                                                    >  2:1980261/1‑93 (MQ=255)

                                     tCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATa                                                   <  1:9711678/93‑1 (MQ=255)

                                      cATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATaa                                                  <  2:7583895/93‑1 (MQ=255)

                                       aTCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAc                                                 <  2:4539958/93‑1 (MQ=255)

                                       aTCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAc                                                 >  1:8109702/1‑93 (MQ=255)

                                        tCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAcc                                                >  1:9642398/1‑93 (MQ=255)

                                          cTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCt                                              <  1:2561934/93‑1 (MQ=255)

                                           tGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCtt                                             >  1:1704846/1‑93 (MQ=255)

                                            gggCGAGGAATTCAGCGTGCCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCttt                                            <  1:8674890/93‑1 (MQ=255)

                                             ggCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                           <  2:286432/93‑1 (MQ=255)

                                             ggCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                           >  1:9915581/1‑93 (MQ=255)

                                             ggCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtc                                           >  1:6506044/1‑93 (MQ=255)

                                               cGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTtctc                                         <  2:40085/93‑1 (MQ=255)

                                                gAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTGCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTcc                                        <  1:6686464/93‑1 (MQ=255)

                                                gAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTcc                                        >  1:9275600/1‑93 (MQ=255)

                                                gAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTcc                                        >  2:9140525/1‑93 (MQ=255)

                                                 aGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTccc                                       >  2:7514478/1‑93 (MQ=255)

                                                 aGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTccc                                       <  2:9480187/93‑1 (MQ=255)

                                                 aGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTccc                                       <  1:3981224/93‑1 (MQ=255)

                                                    aaTTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGt                                    <  1:1109627/93‑1 (MQ=255)

                                                    aaTTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGt                                    <  1:4610355/93‑1 (MQ=255)

                                                     aTTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGtt                                   >  2:8076754/1‑93 (MQ=255)

                                                       tCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTaa                                 >  1:2663685/1‑93 (MQ=255)

                                                       tCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTaa                                 >  2:3814980/1‑93 (MQ=255)

                                                         aGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATc                               <  1:8781699/93‑1 (MQ=255)

                                                           cGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCAt                             <  2:1112943/93‑1 (MQ=255)

                                                            gTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATg                            <  2:3420209/93‑1 (MQ=255)

                                                              ggCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGaa                          >  1:4713011/1‑93 (MQ=255)

                                                              ggCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGaa                          <  1:1786920/93‑1 (MQ=255)

                                                              ggCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGaa                          <  2:8200224/93‑1 (MQ=255)

                                                              ggCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGaa                          <  1:3050461/93‑1 (MQ=255)

                                                              ggCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGaa                          <  2:3632877/93‑1 (MQ=255)

                                                               gCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAAc                         <  1:6011938/93‑1 (MQ=255)

                                                                 gAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACaa                       <  1:8394057/93‑1 (MQ=255)

                                                                 gAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACaa                       >  1:8270422/1‑93 (MQ=255)

                                                                 gAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACaa                       >  2:1701341/1‑93 (MQ=255)

                                                                   aCAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAAt                     <  2:8376824/93‑1 (MQ=255)

                                                                     aGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCa                   >  1:1411292/1‑93 (MQ=255)

                                                                     aGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCa                   <  1:2221404/93‑1 (MQ=255)

                                                                      gCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAt                  <  1:564974/93‑1 (MQ=255)

                                                                      gCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAt                  >  1:7909979/1‑93 (MQ=255)

                                                                      gCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAt                  >  1:3377727/1‑93 (MQ=255)

                                                                       cTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAtt                 <  2:4840646/93‑1 (MQ=255)

                                                                        tttGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTc                <  2:5245110/93‑1 (MQ=255)

                                                                         ttGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCg               >  2:7155695/1‑93 (MQ=255)

                                                                          tGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGc              >  1:7074037/1‑93 (MQ=255)

                                                                           gTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGcc             <  1:4432605/93‑1 (MQ=255)

                                                                            tCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCa            >  1:2053897/1‑93 (MQ=255)

                                                                            tCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCa            <  1:5403252/93‑1 (MQ=255)

                                                                            tCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCa            >  2:889755/1‑93 (MQ=255)

                                                                             cGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCTTGTTAATCATGAACAAATCATTCGCCAt           <  2:6215156/93‑1 (MQ=255)

                                                                             cGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAt           <  2:4677645/93‑1 (MQ=255)

                                                                              gCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATg          >  1:2825356/1‑93 (MQ=255)

                                                                              gCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATg          <  1:123452/93‑1 (MQ=255)

                                                                                tCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGAt        <  1:7270066/93‑1 (MQ=255)

                                                                                  aaTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATta      <  1:4240136/93‑1 (MQ=255)

                                                                                  aaTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATta      <  2:5130161/93‑1 (MQ=255)

                                                                                  aaTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATta      <  2:4996407/93‑1 (MQ=255)

                                                                                  aaTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATta      <  2:7793177/93‑1 (MQ=255)

                                                                                  aaTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATta      >  2:10026175/1‑93 (MQ=255)

                                                                                   aTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtat     >  2:9797841/1‑93 (MQ=255)

                                                                                   aTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtat     >  1:6857432/1‑93 (MQ=255)

                                                                                   aTTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtat     >  1:3832722/1‑93 (MQ=255)

                                                                                    ttCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATtata    <  2:7939296/93‑1 (MQ=255)

                                                                                     tCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTataa   <  1:9155481/93‑1 (MQ=255)

TGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT  >  NC_000913/640962‑641140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 249 total aligned reads displayed.

GGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTT  >  NC_000913/640959‑641144

GGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACT                                                                                              <  SRR4302540.7426040/94‑1 (MQ=60)

GGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACT                                                                                              <  SRR4302540.1211524/94‑1 (MQ=60)

 GCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTT                                                                                             <  SRR4302540.7763416/94‑1 (MQ=60)

   TGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCA                                                                                           <  SRR4302540.1639876/94‑1 (MQ=60)

   TGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCA                                                                                           <  SRR4302540.1532670/94‑1 (MQ=60)

   TGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCA                                                                                           <  SRR4302540.3597365/94‑1 (MQ=60)

      CCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAAT                                                                                        <  SRR4302540.6521754/94‑1 (MQ=60)

      CCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAAT                                                                                        >  SRR4302540.2454290/1‑94 (MQ=60)

      CCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAAT                                                                                        <  SRR4302540.6824366/94‑1 (MQ=60)

       CCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATA                                                                                       >  SRR4302540.4692852/1‑94 (MQ=60)

       CCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATA                                                                                       >  SRR4302540.4692853/1‑94 (MQ=60)

        CGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATAC                                                                                      <  SRR4302540.3261963/94‑1 (MQ=60)

        CGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATAC                                                                                      >  SRR4302540.8957115/1‑94 (MQ=60)

        CGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATAC                                                                                      <  SRR4302540.4515933/94‑1 (MQ=60)

         GGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACA                                                                                     >  SRR4302540.613487/1‑94 (MQ=60)

         GGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACA                                                                                     <  SRR4302540.1633338/94‑1 (MQ=60)

         GGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACA                                                                                     <  SRR4302540.2647831/94‑1 (MQ=60)

         GGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTGTGTCGCTCAATTCCACTTCAAATACA                                                                                     >  SRR4302540.9025328/1‑94 (MQ=60)

           GTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGCGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATC                                                                                   >  SRR4302540.7528832/1‑94 (MQ=60)

            TAGTACGTGAAGTAGATGAATAACTCCGTCATCATGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCA                                                                                  <  SRR4302540.9830877/94‑1 (MQ=60)

             AGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAA                                                                                 >  SRR4302540.242246/1‑94 (MQ=60)

             AGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGCCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAA                                                                                 >  SRR4302540.5457380/1‑94 (MQ=60)

              GTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAAC                                                                                >  SRR4302540.1544969/1‑94 (MQ=60)

              GTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAAC                                                                                <  SRR4302540.3917546/94‑1 (MQ=60)

              GTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAAC                                                                                <  SRR4302540.8419586/94‑1 (MQ=60)

              GTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAAC                                                                                <  SRR4302540.6765385/94‑1 (MQ=60)

               TACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACT                                                                               <  SRR4302540.2386656/94‑1 (MQ=60)

               TACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACT                                                                               >  SRR4302540.6242475/1‑94 (MQ=60)

                ACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTG                                                                              >  SRR4302540.7226914/1‑94 (MQ=60)

                 CGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGG                                                                             <  SRR4302540.5080960/94‑1 (MQ=60)

                 CGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGG                                                                             <  SRR4302540.8799042/94‑1 (MQ=60)

                 CGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCCTTGTCGCTCAATTCCACTTCAAATACATCAACTGG                                                                             >  SRR4302540.6351628/1‑94 (MQ=60)

                  GTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGC                                                                            >  SRR4302540.3494708/1‑94 (MQ=60)

                  GTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGC                                                                            >  SRR4302540.1638390/1‑94 (MQ=60)

                   TGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCA                                                                           <  SRR4302540.2064384/94‑1 (MQ=60)

                    GAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCAT                                                                          <  SRR4302540.3170052/94‑1 (MQ=60)

                    GAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCAT                                                                          >  SRR4302540.2460033/1‑94 (MQ=60)

                    GAAGTAGATGAATAACACCGTCATCCTGGGCGAAGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCAT                                                                          <  SRR4302540.9099832/94‑1 (MQ=60)

                       GTAGATGAATAACTCCGTCATCCTGGGCGAGGCATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAAT                                                                       >  SRR4302540.7535748/1‑94 (MQ=60)

                       GTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAGCAGCTTTGTCGCTCAATTCCACTTCAAATCCATCAACTGGAATACT                                                                       >  SRR4302540.7535749/1‑94 (MQ=60)

                       GTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAAT                                                                       <  SRR4302540.5827552/94‑1 (MQ=60)

                        TAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATG                                                                      <  SRR4302540.8560950/94‑1 (MQ=60)

                        TAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATG                                                                      <  SRR4302540.102531/94‑1 (MQ=60)

                         AGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGA                                                                     >  SRR4302540.8641844/1‑94 (MQ=60)

                         AGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGA                                                                     <  SRR4302540.2691320/94‑1 (MQ=60)

                         AGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGA                                                                     >  SRR4302540.8078156/1‑94 (MQ=60)

                           ATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATT                                                                   <  SRR4302540.6706471/94‑1 (MQ=60)

                            TGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTG                                                                  >  SRR4302540.4373800/1‑94 (MQ=60)

                            TGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTG                                                                  >  SRR4302540.5143484/1‑94 (MQ=60)

                            TGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTG                                                                  <  SRR4302540.1662494/94‑1 (MQ=60)

                             GAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGT                                                                 >  SRR4302540.5173544/1‑94 (MQ=60)

                             GAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGT                                                                 <  SRR4302540.7966527/94‑1 (MQ=60)

                              AATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTC                                                                >  SRR4302540.180302/1‑94 (MQ=60)

                              AATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTC                                                                >  SRR4302540.7987317/1‑94 (MQ=60)

                               ATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGGACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATCATGATTGTCT                                                               >  SRR4302540.7678660/1‑94 (MQ=60)

                               ATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCT                                                               >  SRR4302540.9508078/1‑94 (MQ=60)

                               ATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCT                                                               <  SRR4302540.1592314/94‑1 (MQ=60)

                                TAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTT                                                              >  SRR4302540.4678669/1‑94 (MQ=60)

                                 AACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTA                                                             >  SRR4302540.6894030/1‑94 (MQ=60)

                                  ACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTAT                                                            <  SRR4302540.8359371/94‑1 (MQ=60)

                                  ACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTAT                                                            <  SRR4302540.5048889/94‑1 (MQ=60)

                                  ACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTAT                                                            <  SRR4302540.6091472/94‑1 (MQ=60)

                                  ACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTAT                                                            <  SRR4302540.867196/94‑1 (MQ=60)

                                   CTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATA                                                           >  SRR4302540.1974680/1‑94 (MQ=60)

                                   CTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATA                                                           >  SRR4302540.750928/1‑94 (MQ=60)

                                    TCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATAC                                                          <  SRR4302540.8549851/94‑1 (MQ=60)

                                    TCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATAC                                                          <  SRR4302540.8481038/94‑1 (MQ=60)

                                    TCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATAC                                                          >  SRR4302540.1755294/1‑94 (MQ=60)

                                     CCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACA                                                         >  SRR4302540.4179490/1‑94 (MQ=60)

                                     CCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACA                                                         >  SRR4302540.4840262/1‑94 (MQ=60)

                                     CCGTCATCCTGGGCGAGCAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACA                                                         <  SRR4302540.4700321/94‑1 (MQ=60)

                                      CGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACAT                                                        <  SRR4302540.6600907/94‑1 (MQ=60)

                                       GTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATA                                                       >  SRR4302540.3137811/1‑94 (MQ=60)

                                        TCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATATATAA                                                      >  SRR4302540.4774758/1‑94 (MQ=60)

                                        TCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAA                                                      <  SRR4302540.9825815/94‑1 (MQ=60)

                                        TCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAA                                                      >  SRR4302540.8550416/1‑94 (MQ=60)

                                         CATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAC                                                     >  SRR4302540.8203827/1‑94 (MQ=60)

                                         CATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAC                                                     >  SRR4302540.975726/1‑94 (MQ=60)

                                         CATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAAC                                                     <  SRR4302540.5039733/94‑1 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    >  SRR4302540.9755975/1‑94 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    >  SRR4302540.8244211/1‑94 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    <  SRR4302540.9901550/94‑1 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    <  SRR4302540.7666918/94‑1 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    >  SRR4302540.1272968/1‑94 (MQ=60)

                                          ATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACC                                                    >  SRR4302540.1272969/1‑94 (MQ=60)

                                            CCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCT                                                  >  SRR4302540.8157468/1‑94 (MQ=60)

                                             CTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTT                                                 <  SRR4302540.5143347/94‑1 (MQ=60)

                                             CTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTT                                                 <  SRR4302540.2589556/94‑1 (MQ=60)

                                             CTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTT                                                 >  SRR4302540.3717389/1‑94 (MQ=60)

                                             CTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTT                                                 <  SRR4302540.2589557/94‑1 (MQ=60)

                                              TGGGCGAGGAATTCAGCGTGGCGAACAGCTTTTTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTT                                                >  SRR4302540.4834052/1‑94 (MQ=60)

                                               GGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTC                                               >  SRR4302540.6578353/1‑94 (MQ=60)

                                               GGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTC                                               >  SRR4302540.6395328/1‑94 (MQ=60)

                                               GGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTC                                               >  SRR4302540.10031386/1‑94 (MQ=60)

                                               GGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTC                                               >  SRR4302540.7380349/1‑94 (MQ=60)

                                               GGGCGAGGAATTCAGCGTGCCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTC                                               <  SRR4302540.8775647/94‑1 (MQ=60)

                                                 GCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTC                                             >  SRR4302540.10093953/1‑94 (MQ=60)

                                                  CGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCC                                            >  SRR4302540.1692296/1‑94 (MQ=60)

                                                  CGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCC                                            >  SRR4302540.9386498/1‑94 (MQ=60)

                                                   GAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTGCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCC                                           <  SRR4302540.6760295/94‑1 (MQ=60)

                                                   GAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCC                                           >  SRR4302540.15970/1‑94 (MQ=60)

                                                   GAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCC                                           >  SRR4302540.4781494/1‑94 (MQ=60)

                                                    AGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCT                                          >  SRR4302540.8776066/1‑94 (MQ=60)

                                                    AGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCT                                          >  SRR4302540.6131034/1‑94 (MQ=60)

                                                    AGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCT                                          <  SRR4302540.4024104/94‑1 (MQ=60)

                                                    AGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCT                                          <  SRR4302540.8553579/94‑1 (MQ=60)

                                                       AATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTT                                       <  SRR4302540.8732237/94‑1 (MQ=60)

                                                       AATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTT                                       <  SRR4302540.2453800/94‑1 (MQ=60)

                                                       AATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTT                                       <  SRR4302540.1121099/94‑1 (MQ=60)

                                                        ATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTA                                      >  SRR4302540.5212484/1‑94 (MQ=60)

                                                        ATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTA                                      >  SRR4302540.9292614/1‑94 (MQ=60)

                                                        ATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTA                                      >  SRR4302540.2876850/1‑94 (MQ=60)

                                                        ATTCAGCGTGGCGAACAGCTTTGTCGCTCAATACCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTA                                      >  SRR4302540.2058972/1‑94 (MQ=60)

                                                         TTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAA                                     >  SRR4302540.9731614/1‑94 (MQ=60)

                                                         TTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAA                                     >  SRR4302540.2692574/1‑94 (MQ=60)

                                                          TCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAAT                                    <  SRR4302540.2488107/94‑1 (MQ=60)

                                                           CAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATC                                   <  SRR4302540.3453908/94‑1 (MQ=60)

                                                           CAGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATC                                   >  SRR4302540.649560/1‑94 (MQ=60)

                                                            AGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATATATCAACTagcaccataactgtcgtatacatcacccttactacctgttaaaca                                  >  SRR4302540.10011988/1‑49 (MQ=60)

                                                            AGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCA                                  <  SRR4302540.3625487/94‑1 (MQ=60)

                                                            AGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCA                                  <  SRR4302540.1241380/94‑1 (MQ=60)

                                                            AGCGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCA                                  <  SRR4302540.8883366/94‑1 (MQ=60)

                                                              CGTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATG                                <  SRR4302540.9321212/94‑1 (MQ=60)

                                                               GTGGGGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGA                               <  SRR4302540.1058560/94‑1 (MQ=60)

                                                               GTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGA                               >  SRR4302540.9559982/1‑94 (MQ=60)

                                                               GTGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGA                               >  SRR4302540.2811002/1‑94 (MQ=60)

                                                                gggcgaagatCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACAAAACCCTTGCTCCCTGTTAATCATGAA                              <  SRR4302540.7251539/84‑1 (MQ=60)

                                                                TGGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAA                              >  SRR4302540.7638186/1‑94 (MQ=60)

                                                                 GGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAAC                             <  SRR4302540.3083930/94‑1 (MQ=60)

                                                                 GGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAAC                             <  SRR4302540.1806333/94‑1 (MQ=60)

                                                                 GGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAAC                             <  SRR4302540.503722/94‑1 (MQ=60)

                                                                 GGCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAAC                             >  SRR4302540.6523357/1‑94 (MQ=60)

                                                                  GCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACA                            <  SRR4302540.6078607/94‑1 (MQ=60)

                                                                  GCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACA                            <  SRR4302540.1737180/94‑1 (MQ=60)

                                                                  GCGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACA                            <  SRR4302540.9773516/94‑1 (MQ=60)

                                                                   CGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAA                           >  SRR4302540.2754931/1‑94 (MQ=60)

                                                                   CGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAA                           >  SRR4302540.8366515/1‑94 (MQ=60)

                                                                   CGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAA                           <  SRR4302540.1201203/94‑1 (MQ=60)

                                                                   CGAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAA                           <  SRR4302540.3907413/94‑1 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCTACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          >  SRR4302540.4475638/1‑94 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          >  SRR4302540.5653974/1‑94 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          <  SRR4302540.8491466/94‑1 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          >  SRR4302540.1397720/1‑94 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          >  SRR4302540.5988328/1‑94 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          <  SRR4302540.3033658/94‑1 (MQ=60)

                                                                    GAACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAA                          <  SRR4302540.6544895/94‑1 (MQ=60)

                                                                     AACAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAAT                         <  SRR4302540.1426453/94‑1 (MQ=60)

                                                                       CAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCA                       >  SRR4302540.1581640/1‑94 (MQ=60)

                                                                       CAGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCA                       >  SRR4302540.2183561/1‑94 (MQ=60)

                                                                        AGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAT                      <  SRR4302540.7132154/94‑1 (MQ=60)

                                                                        AGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAT                      <  SRR4302540.2245351/94‑1 (MQ=60)

                                                                        AGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAT                      >  SRR4302540.3414621/1‑94 (MQ=60)

                                                                        AGCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCAT                      >  SRR4302540.8002214/1‑94 (MQ=60)

                                                                         GCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATT                     >  SRR4302540.3323632/1‑94 (MQ=60)

                                                                         GCTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATT                     <  SRR4302540.571116/94‑1 (MQ=60)

                                                                          CTTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTC                    >  SRR4302540.5960748/1‑94 (MQ=60)

                                                                           TTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCG                   >  SRR4302540.7741061/1‑94 (MQ=60)

                                                                           TTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCG                   <  SRR4302540.4132473/94‑1 (MQ=60)

                                                                           TTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCG                   <  SRR4302540.8210533/94‑1 (MQ=60)

                                                                           TTTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCG                   >  SRR4302540.5034653/1‑94 (MQ=60)

                                                                            TTGTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGC                  >  SRR4302540.7152747/1‑94 (MQ=60)

                                                                              GTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCA                >  SRR4302540.2076007/1‑94 (MQ=60)

                                                                              GTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCA                >  SRR4302540.4589247/1‑94 (MQ=60)

                                                                              GTCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCA                >  SRR4302540.10064010/1‑94 (MQ=60)

                                                                               TCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAT               <  SRR4302540.1061749/94‑1 (MQ=60)

                                                                               TCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAT               <  SRR4302540.1001927/94‑1 (MQ=60)

                                                                               TCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAT               <  SRR4302540.6757522/94‑1 (MQ=60)

                                                                               TCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAT               <  SRR4302540.916436/94‑1 (MQ=60)

                                                                               TCGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCAT               <  SRR4302540.5462655/94‑1 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              <  SRR4302540.720306/94‑1 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              >  SRR4302540.8049953/1‑94 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              >  SRR4302540.4567128/1‑94 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              >  SRR4302540.2699409/1‑94 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              >  SRR4302540.2855885/1‑94 (MQ=60)

                                                                                CGCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATG              >  SRR4302540.3385587/1‑94 (MQ=60)

                                                                                 GCTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGA             >  SRR4302540.4287545/1‑94 (MQ=60)

                                                                                  CTCAATTCCTCTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGAT            >  SRR4302540.2188722/1‑94 (MQ=60)

                                                                                  CTCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGAT            >  SRR4302540.9277848/1‑94 (MQ=60)

                                                                                   TCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATT           <  SRR4302540.7351189/94‑1 (MQ=60)

                                                                                   TCAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATT           <  SRR4302540.1219719/94‑1 (MQ=60)

                                                                                    CAATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTA          >  SRR4302540.6966653/1‑94 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         >  SRR4302540.1517305/1‑94 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         <  SRR4302540.4286268/94‑1 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         >  SRR4302540.3874429/1‑94 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         <  SRR4302540.3592246/94‑1 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         >  SRR4302540.3345726/1‑94 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         >  SRR4302540.6933417/1‑94 (MQ=60)

                                                                                     AATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTAT         >  SRR4302540.1517304/1‑94 (MQ=60)

                                                                                      ATTTCACTTCAAATACCTCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATA        <  SRR4302540.2134431/94‑1 (MQ=60)

                                                                                      ATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACTAATCATTCGCCATGATTATA        <  SRR4302540.9857442/94‑1 (MQ=60)

                                                                                      ATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATA        >  SRR4302540.3108460/1‑94 (MQ=60)

                                                                                      ATTCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATA        <  SRR4302540.4497436/94‑1 (MQ=60)

                                                                                        TCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT      <  SRR4302540.9265396/94‑1 (MQ=60)

                                                                                        TCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT      >  SRR4302540.5503469/1‑94 (MQ=60)

                                                                                        TCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT      >  SRR4302540.5452786/1‑94 (MQ=60)

                                                                                        TCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT      >  SRR4302540.3904508/1‑94 (MQ=60)

                                                                                        TCCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAAT      >  SRR4302540.4171405/1‑94 (MQ=60)

                                                                                         CCACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATA     >  SRR4302540.5711530/1‑94 (MQ=60)

                                                                                           ACTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATT   >  SRR4302540.3280720/1‑94 (MQ=60)

                                                                                            CTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTT  <  SRR4302540.5720934/94‑1 (MQ=60)

GGCTGACCCGGGTAGTACGTGAAGTAGATGAATAACTCCGTCATCCTGGGCGAGGAATTCAGCGTGGCGAACAGCTTTGTCGCTCAATTCCATTTCAAATACATCAACTGGCATAATGATTGTCTTATACATAACCCTTTCTCCCTGTTAATCATGAACAAATCATTCGCCATGATTATAATATTT  >  NC_000913/640959‑641144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`