Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	645,034	A→G	V257A (GTG→GCG)	ybdS ←	YbdS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	645,034	0	A	G	99.7%	978.5 / NA	306	V257A (GTG→GCG)	ybdS	YbdS
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (143/161); minor base C (0/1); total (143/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 320 total aligned reads displayed.

TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC  >  NC_000913/644944‑645122

tctctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGcgcg                                                                                        >  2:7603678/1‑93 (MQ=255)

  tctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTa                                                                                      >  2:19831/1‑93 (MQ=255)

  tctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTCCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTa                                                                                      <  1:9000743/93‑1 (MQ=255)

    tGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAgg                                                                                    >  1:3412870/1‑93 (MQ=255)

    tGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAgg                                                                                    >  2:4138488/1‑93 (MQ=255)

     gcgcGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACCGCGCGTAGGa                                                                                   >  2:2824098/1‑93 (MQ=255)

     gCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGa                                                                                   <  1:5716472/93‑1 (MQ=255)

        tgtCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAg                                                                                >  2:5931264/1‑93 (MQ=255)

           cAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCa                                                                             <  2:5087902/93‑1 (MQ=255)

           cAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCa                                                                             <  2:3950717/93‑1 (MQ=255)

            aGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAc                                                                            <  2:4842075/93‑1 (MQ=255)

            aGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAc                                                                            <  1:942751/93‑1 (MQ=255)

             gcgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACg                                                                           <  2:9042574/93‑1 (MQ=255)

              cgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACgg                                                                          <  1:6410375/93‑1 (MQ=255)

              cgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACgg                                                                          <  1:2296377/93‑1 (MQ=255)

               gcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGgc                                                                         >  2:2331936/1‑93 (MQ=255)

                  cccATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCa                                                                      >  1:3959938/1‑93 (MQ=255)

                  cccATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCa                                                                      >  1:1617904/1‑93 (MQ=255)

                   ccATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCaa                                                                     <  2:5300914/93‑1 (MQ=255)

                    cATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAAt                                                                    >  1:2569156/1‑93 (MQ=255)

                     ctGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTTTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATg                                                                   <  1:2838645/92‑1 (MQ=255)

                      tGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGa                                                                  <  1:760850/93‑1 (MQ=255)

                      tGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGACCAATGa                                                                  >  2:5745372/1‑93 (MQ=255)

                        gTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATa                                                                >  1:9592977/1‑93 (MQ=255)

                         ttttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATaa                                                               >  2:3512917/1‑93 (MQ=255)

                          tttCAGTTCATCACGCGCCCAGGTTGCCTCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAg                                                              <  1:15458/93‑1 (MQ=255)

                          tttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATaac                                                              >  1:7354880/1‑92 (MQ=255)

                          tttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAg                                                              <  2:2509567/93‑1 (MQ=255)

                          tttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAg                                                              >  2:6909932/1‑93 (MQ=255)

                          tttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAg                                                              >  2:7745436/1‑93 (MQ=255)

                            tCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCa                                                            >  2:9709818/1‑93 (MQ=255)

                              aGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAg                                                          >  2:3865931/1‑93 (MQ=255)

                               gTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGa                                                         >  2:6128865/1‑93 (MQ=255)

                                ttCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGAt                                                        <  1:3310966/93‑1 (MQ=255)

                                ttCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGAt                                                        >  1:1087864/1‑93 (MQ=255)

                                 tcatcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa                                                       <  1:4167795/93‑1 (MQ=255)

                                   atcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAc                                                     >  1:4766684/1‑93 (MQ=255)

                                   atcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAc                                                     <  1:2232915/93‑1 (MQ=255)

                                   atcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAc                                                     <  2:9143142/93‑1 (MQ=255)

                                    tcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcc                                                    >  2:5544321/1‑93 (MQ=255)

                                    tcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcc                                                    <  2:9345906/93‑1 (MQ=255)

                                    tcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcc                                                    <  1:874913/93‑1 (MQ=255)

                                       cccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACcaca                                                 >  1:6588877/1‑93 (MQ=255)

                                        ccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCaa                                                <  1:8010596/93‑1 (MQ=255)

                                         cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc                                               >  1:132705/1‑93 (MQ=255)

                                         cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc                                               <  2:988944/93‑1 (MQ=255)

                                         cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc                                               <  1:4349098/93‑1 (MQ=255)

                                         cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc                                               <  1:1674410/93‑1 (MQ=255)

                                           cccAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCg                                             >  1:1935986/1‑93 (MQ=255)

                                            ccAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCgg                                            <  2:8646867/93‑1 (MQ=255)

                                             cAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGc                                           >  1:3010387/1‑93 (MQ=255)

                                               ggTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAg                                         <  1:8214381/93‑1 (MQ=255)

                                                gTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAgg                                        <  2:4568014/93‑1 (MQ=255)

                                                gTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAgg                                        <  1:3390778/93‑1 (MQ=255)

                                                gTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAgg                                        >  2:1223497/1‑93 (MQ=255)

                                                    ccACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGc                                    <  2:3783076/93‑1 (MQ=255)

                                                      aCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCag                                  <  2:353759/93‑1 (MQ=255)

                                                       cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga                                 <  1:3587502/93‑1 (MQ=255)

                                                       cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga                                 >  1:6861380/1‑93 (MQ=255)

                                                        ttcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCagag                                >  1:621803/1‑93 (MQ=255)

                                                        tgcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCagag                                <  2:315252/91‑1 (MQ=255)

                                                         tcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg                               >  1:4617019/1‑93 (MQ=255)

                                                         tcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg                               <  1:5231890/93‑1 (MQ=255)

                                                         tcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg                               >  1:2753813/1‑93 (MQ=255)

                                                          cttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGa                              >  2:5630357/1‑93 (MQ=255)

                                                          cttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGa                              <  2:6614533/93‑1 (MQ=255)

                                                           ttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGaa                             <  2:7177355/93‑1 (MQ=255)

                                                             cACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAcc                           <  1:2412106/93‑1 (MQ=255)

                                                              aCTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCa                          <  2:853611/93‑1 (MQ=255)

                                                              aCTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCa                          <  2:4980114/93‑1 (MQ=255)

                                                              aCTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCa                          >  1:8645510/1‑93 (MQ=255)

                                                               cTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCAc                         <  1:7081843/93‑1 (MQ=255)

                                                               cTGGGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCAc                         >  2:735772/1‑93 (MQ=255)

                                                                tgtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACt                        >  2:2735958/1‑93 (MQ=255)

                                                                tgtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACt                        >  2:5199543/1‑93 (MQ=255)

                                                                  tgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGc                      >  2:8021050/1‑93 (MQ=255)

                                                                    tgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCaa                    <  1:2724215/93‑1 (MQ=255)

                                                                    tgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCaa                    >  1:9285328/1‑93 (MQ=255)

                                                                     gtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAc                   <  2:7101989/93‑1 (MQ=255)

                                                                     gtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAc                   >  1:6675680/1‑93 (MQ=255)

                                                                      tgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAcc                  <  1:7778681/93‑1 (MQ=255)

                                                                      tgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAcc                  >  2:4378347/1‑93 (MQ=255)

                                                                          ttCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCt              <  2:1573246/93‑1 (MQ=255)

                                                                            ccGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACGCCAACCGGCAGGGAGCAGAGCAACCACTGCAACCAGCTaa            >  1:5310471/1‑93 (MQ=255)

                                                                            ccGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTaa            <  2:8121242/93‑1 (MQ=255)

                                                                            ccGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTaa            <  2:8883204/93‑1 (MQ=255)

                                                                             cGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAAt           >  1:2096226/1‑93 (MQ=255)

                                                                              ggTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATc          <  2:9450539/93‑1 (MQ=255)

                                                                              ggTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATc          <  1:989572/93‑1 (MQ=255)

                                                                              ggTTTGTACAGCCGGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATc          <  1:324702/93‑1 (MQ=255)

                                                                               gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt         <  2:3195700/93‑1 (MQ=255)

                                                                               gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt         >  2:2948599/1‑93 (MQ=255)

                                                                               gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt         >  1:3841380/1‑93 (MQ=255)

                                                                               gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt         >  1:2004388/1‑93 (MQ=255)

                                                                               gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt         <  1:4275921/93‑1 (MQ=255)

                                                                                  tGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGa      <  2:217874/93‑1 (MQ=255)

                                                                                    tACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATa    <  2:8927886/93‑1 (MQ=255)

                                                                                     aCAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATAc   <  1:6042092/93‑1 (MQ=255)

                                                                                      cAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATAcc  <  2:3371603/93‑1 (MQ=255)

                                                                                      cAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATAcc  <  1:5947549/93‑1 (MQ=255)

TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC  >  NC_000913/644944‑645122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGC  >  NC_000913/644941‑645125

CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCG                                                                                             >  SRR4302540.4724604/1‑94 (MQ=60)

  CTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCG                                                                                           >  SRR4302540.1106282/1‑94 (MQ=60)

  CTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCG                                                                                           >  SRR4302540.681639/1‑94 (MQ=60)

   TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGT                                                                                          >  SRR4302540.2339055/1‑94 (MQ=60)

   TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGT                                                                                          >  SRR4302540.6686470/1‑94 (MQ=60)

     TCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAG                                                                                        <  SRR4302540.350718/94‑1 (MQ=60)

     TCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAG                                                                                        <  SRR4302540.1876631/94‑1 (MQ=60)

     TCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTCCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAG                                                                                        <  SRR4302540.9108731/94‑1 (MQ=60)

      CTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGG                                                                                       >  SRR4302540.3450029/1‑94 (MQ=60)

      CTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGG                                                                                       <  SRR4302540.4285553/94‑1 (MQ=60)

       TGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGA                                                                                      <  SRR4302540.8209980/94‑1 (MQ=60)

        GCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAA                                                                                     >  SRR4302540.3390863/1‑94 (MQ=60)

        GCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAA                                                                                     <  SRR4302540.5779397/94‑1 (MQ=60)

         CGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAA                                                                                    >  SRR4302540.602953/1‑94 (MQ=60)

          GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG                                                                                   >  SRR4302540.4694072/1‑94 (MQ=60)

              CAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAC                                                                               <  SRR4302540.5833317/94‑1 (MQ=60)

               CGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACG                                                                              <  SRR4302540.6018241/94‑1 (MQ=60)

               AGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACG                                                                              >  SRR4302540.80892/1‑94 (MQ=60)

               AGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACG                                                                              <  SRR4302540.952593/94‑1 (MQ=60)

                 CGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGC                                                                            <  SRR4302540.6481718/94‑1 (MQ=60)

                 CGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGC                                                                            <  SRR4302540.2321092/94‑1 (MQ=60)

                  GCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCG                                                                           >  SRR4302540.5308436/1‑94 (MQ=60)

                   CACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGC                                                                          >  SRR4302540.4655139/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.1889800/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.4002650/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.4073737/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.476192/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         <  SRR4302540.4902792/94‑1 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.1635646/1‑94 (MQ=60)

                    ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA                                                                         >  SRR4302540.768552/1‑94 (MQ=60)

                      CCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAAT                                                                       >  SRR4302540.2596857/1‑94 (MQ=60)

                       CATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATG                                                                      <  SRR4302540.4215623/94‑1 (MQ=60)

                       CATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATG                                                                      <  SRR4302540.2893245/94‑1 (MQ=60)

                        CTGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTTTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGA                                                                     <  SRR4302540.2869349/94‑1 (MQ=60)

                         TGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGAT                                                                    <  SRR4302540.768946/94‑1 (MQ=60)

                         TGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGAGCGTAGGAAAGCCACGGCGCAATGAT                                                                    >  SRR4302540.5470015/1‑94 (MQ=60)

                          GGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATA                                                                   <  SRR4302540.9564224/94‑1 (MQ=60)

                          GGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATA                                                                   >  SRR4302540.9706188/1‑94 (MQ=60)

                          GGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATA                                                                   >  SRR4302540.547362/1‑94 (MQ=60)

                            TTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAG                                                                 <  SRR4302540.2076999/94‑1 (MQ=60)

                            TTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAC                                                                 >  SRR4302540.7436909/1‑94 (MQ=60)

                             TTTCAGTTCATCACGCGCCCAGGTTGCCTCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGC                                                                <  SRR4302540.15632/94‑1 (MQ=60)

                              TTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCA                                                               <  SRR4302540.3447712/94‑1 (MQ=60)

                                 AGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGA                                                            <  SRR4302540.3528438/94‑1 (MQ=60)

                                  GTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGAT                                                           <  SRR4302540.4351173/94‑1 (MQ=60)

                                  GTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGAT                                                           >  SRR4302540.1099022/1‑94 (MQ=60)

                                   TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA                                                          <  SRR4302540.3347240/94‑1 (MQ=60)

                                   TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA                                                          >  SRR4302540.1972449/1‑94 (MQ=60)

                                    TCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAA                                                         <  SRR4302540.4212989/94‑1 (MQ=60)

                                    TCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAA                                                         >  SRR4302540.8863092/1‑94 (MQ=60)

                                    TCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAA                                                         <  SRR4302540.4364199/94‑1 (MQ=60)

                                     CATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAC                                                        >  SRR4302540.4817588/1‑94 (MQ=60)

                                     CATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAC                                                        <  SRR4302540.7167344/94‑1 (MQ=60)

                                      ATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACC                                                       <  SRR4302540.2604049/94‑1 (MQ=60)

                                      ATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACC                                                       <  SRR4302540.2256947/94‑1 (MQ=60)

                                       TCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCC                                                      <  SRR4302540.2357263/94‑1 (MQ=60)

                                       TCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCC                                                      <  SRR4302540.5993255/94‑1 (MQ=60)

                                       TCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCC                                                      <  SRR4302540.884198/94‑1 (MQ=60)

                                        CACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGCACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCC                                                     <  SRR4302540.3368688/94‑1 (MQ=60)

                                         ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA                                                    >  SRR4302540.3497139/1‑94 (MQ=60)

                                         ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA                                                    >  SRR4302540.6661855/1‑94 (MQ=60)

                                         ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA                                                    >  SRR4302540.1579706/1‑94 (MQ=60)

                                         ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCACA                                                    >  SRR4302540.6661856/1‑94 (MQ=60)

                                           CCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAC                                                  >  SRR4302540.134096/1‑94 (MQ=60)

                                           CCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAC                                                  >  SRR4302540.6693650/1‑94 (MQ=60)

                                           CCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAC                                                  <  SRR4302540.8103786/94‑1 (MQ=60)

                                            CGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACC                                                 <  SRR4302540.4396413/94‑1 (MQ=60)

                                            CGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACC                                                 >  SRR4302540.2161091/1‑94 (MQ=60)

                                            CGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACC                                                 <  SRR4302540.1692603/94‑1 (MQ=60)

                                             GCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCG                                                <  SRR4302540.9140668/94‑1 (MQ=60)

                                             GCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCG                                                >  SRR4302540.1957076/1‑94 (MQ=60)

                                             GCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCG                                                <  SRR4302540.5332409/94‑1 (MQ=60)

                                             GCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCG                                                >  SRR4302540.9561702/1‑94 (MQ=60)

                                             GCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCG                                                <  SRR4302540.2865080/94‑1 (MQ=60)

                                              gtCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG                                               <  SRR4302540.7162724/92‑1 (MQ=60)

                                              CCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG                                               >  SRR4302540.3667463/1‑94 (MQ=60)

                                              CCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG                                               >  SRR4302540.3318631/1‑94 (MQ=60)

                                              CCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG                                               >  SRR4302540.98921/1‑94 (MQ=60)

                                               CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC                                              >  SRR4302540.6825180/1‑94 (MQ=60)

                                               CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC                                              <  SRR4302540.4612954/94‑1 (MQ=60)

                                               CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC                                              >  SRR4302540.3043506/1‑94 (MQ=60)

                                               CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC                                              >  SRR4302540.9048449/1‑94 (MQ=60)

                                               CCAGGTTGCCACTTCTTCACTGTGTGAGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAATCCCCACCAGC                                              >  SRR4302540.2144426/1‑94 (MQ=60)

                                                CAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCA                                             >  SRR4302540.1775691/1‑94 (MQ=60)

                                                CAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCA                                             >  SRR4302540.2579365/1‑94 (MQ=60)

                                                CAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCA                                             >  SRR4302540.2769269/1‑94 (MQ=60)

                                                CAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCA                                             <  SRR4302540.3918363/94‑1 (MQ=60)

                                                CAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCA                                             >  SRR4302540.2769270/1‑94 (MQ=60)

                                                 AGGTTGCCGCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAG                                            <  SRR4302540.9880446/94‑1 (MQ=60)

                                                 AGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAG                                            <  SRR4302540.1554278/94‑1 (MQ=60)

                                                 AGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAG                                            >  SRR4302540.9223933/1‑94 (MQ=60)

                                                 AGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAG                                            <  SRR4302540.9880445/94‑1 (MQ=60)

                                                  GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG                                           >  SRR4302540.3001894/1‑94 (MQ=60)

                                                  GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG                                           <  SRR4302540.8309858/94‑1 (MQ=60)

                                                  GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG                                           <  SRR4302540.4359082/94‑1 (MQ=60)

                                                   GTTGGCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGA                                          <  SRR4302540.3630926/94‑1 (MQ=60)

                                                   GTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGA                                          <  SRR4302540.3427773/94‑1 (MQ=60)

                                                      GCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGC                                       <  SRR4302540.2260509/94‑1 (MQ=60)

                                                       CCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCACCCGGCAGGAAGCA                                      >  SRR4302540.8798012/1‑94 (MQ=60)

                                                       CCACTTCTTCACTGTGTGTGATTTCCGGTTGGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCA                                      <  SRR4302540.1594753/94‑1 (MQ=60)

                                                        CACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAG                                     >  SRR4302540.6471811/1‑94 (MQ=60)

                                                        CACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAG                                     >  SRR4302540.1432850/1‑94 (MQ=60)

                                                        CACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAG                                     <  SRR4302540.8238957/94‑1 (MQ=60)

                                                         ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGA                                    >  SRR4302540.6443058/1‑94 (MQ=60)

                                                         ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGA                                    >  SRR4302540.8521450/1‑94 (MQ=60)

                                                         ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGA                                    >  SRR4302540.6937424/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.5715270/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.6576009/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.6576010/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.746277/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.628423/1‑94 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   <  SRR4302540.3626684/94‑1 (MQ=60)

                                                          CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG                                   >  SRR4302540.4154451/1‑94 (MQ=60)

                                                           TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGCAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG                                  >  SRR4302540.2783578/1‑94 (MQ=60)

                                                           TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG                                  >  SRR4302540.2783577/1‑94 (MQ=60)

                                                           TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG                                  >  SRR4302540.4666534/1‑94 (MQ=60)

                                                           TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG                                  >  SRR4302540.321742/1‑94 (MQ=60)

                                                           TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG                                  <  SRR4302540.2032015/94‑1 (MQ=60)

                                                            TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA                                 <  SRR4302540.2622077/94‑1 (MQ=60)

                                                            TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA                                 <  SRR4302540.3981524/94‑1 (MQ=60)

                                                            TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA                                 <  SRR4302540.5288946/94‑1 (MQ=60)

                                                              TTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAC                               <  SRR4302540.8315940/94‑1 (MQ=60)

                                                               TCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACC                              >  SRR4302540.7895503/1‑94 (MQ=60)

                                                               TCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACC                              >  SRR4302540.2928080/1‑94 (MQ=60)

                                                                CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCA                             >  SRR4302540.8745942/1‑94 (MQ=60)

                                                                CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCA                             >  SRR4302540.2295259/1‑94 (MQ=60)

                                                                CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCA                             <  SRR4302540.2438108/94‑1 (MQ=60)

                                                                 ACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAGCCCCAACCGGCAGGAAGCAGAGGAACCAC                            <  SRR4302540.6175445/94‑1 (MQ=60)

                                                                 ACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCAC                            <  SRR4302540.3434178/94‑1 (MQ=60)

                                                                  CTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACT                           <  SRR4302540.7160661/94‑1 (MQ=60)

                                                                  CTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACT                           <  SRR4302540.942658/94‑1 (MQ=60)

                                                                   TGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTG                          <  SRR4302540.1177720/94‑1 (MQ=60)

                                                                    GTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGA                         >  SRR4302540.940965/1‑94 (MQ=60)

                                                                     TGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCA                        >  SRR4302540.7702185/1‑94 (MQ=60)

                                                                      GTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAA                       >  SRR4302540.9396290/1‑94 (MQ=60)

                                                                       TGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAC                      <  SRR4302540.1643755/94‑1 (MQ=60)

                                                                       TGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAC                      <  SRR4302540.1643754/94‑1 (MQ=60)

                                                                       TGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAC                      >  SRR4302540.6749426/1‑94 (MQ=60)

                                                                       TGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAC                      <  SRR4302540.2753589/94‑1 (MQ=60)

                                                                        GTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACC                     <  SRR4302540.1963532/94‑1 (MQ=60)

                                                                        GTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACC                     >  SRR4302540.2349219/1‑94 (MQ=60)

                                                                         TGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCA                    <  SRR4302540.7869611/94‑1 (MQ=60)

                                                                              TCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACGCCAACCGGCAGGGAGCAGAGCAACCACTGCAACCAGCTAA               >  SRR4302540.5368596/1‑94 (MQ=60)

                                                                               CCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAAT              >  SRR4302540.2118732/1‑94 (MQ=60)

                                                                                 GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT            <  SRR4302540.999675/94‑1 (MQ=60)

                                                                                 GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT            >  SRR4302540.3883158/1‑94 (MQ=60)

                                                                                 GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT            >  SRR4302540.2026088/1‑94 (MQ=60)

                                                                                 GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT            <  SRR4302540.327954/94‑1 (MQ=60)

                                                                                 GGTTTGTACAGCCGGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT            <  SRR4302540.327953/94‑1 (MQ=60)

                                                                                  GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG           <  SRR4302540.4322433/94‑1 (MQ=60)

                                                                                  GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG           <  SRR4302540.8760290/94‑1 (MQ=60)

                                                                                  GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGACAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG           <  SRR4302540.8760291/94‑1 (MQ=60)

                                                                                     TGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGAT        <  SRR4302540.6197131/94‑1 (MQ=60)

                                                                                     TGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAAGAACCACTGCAACAACCTAATCTGGAT        >  SRR4302540.3091897/1‑94 (MQ=60)

                                                                                      GTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATA       <  SRR4302540.7662192/94‑1 (MQ=60)

                                                                                       TACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATAC      <  SRR4302540.2547610/94‑1 (MQ=60)

                                                                                        ACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC     <  SRR4302540.5223455/94‑1 (MQ=60)

                                                                                        ACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC     <  SRR4302540.6109197/94‑1 (MQ=60)

                                                                                        ACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC     <  SRR4302540.7051103/94‑1 (MQ=60)

                                                                                        ACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACC     <  SRR4302540.7051105/94‑1 (MQ=60)

                                                                                         CAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCG    <  SRR4302540.6013307/94‑1 (MQ=60)

                                                                                         CAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCG    <  SRR4302540.7700557/94‑1 (MQ=60)

                                                                                          AGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGG   >  SRR4302540.7985100/1‑94 (MQ=60)

                                                                                          AGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGG   >  SRR4302540.3751212/1‑94 (MQ=60)

                                                                                           GCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGC  <  SRR4302540.2790896/94‑1 (MQ=60)

CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGC  >  NC_000913/644941‑645125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`