Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
645,034 |
A→G |
V257A (GTG→GCG) |
ybdS ← |
YbdS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 645,034 | 0 | A | G | 100.0%
| 697.9
/ NA
| 218 | V257A (GTG→GCG) | ybdS | YbdS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (91/127); total (91/127) |
Only 100 of 226 total aligned reads displayed.
TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCG > NC_000913/644944‑645123
|
tctctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGcgcg > 1:5681227/1‑93 (MQ=255)
ctctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTTTACAGCGCGt > 2:3233718/1‑93 (MQ=255)
ctctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGt < 2:3402709/93‑1 (MQ=255)
ctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAg > 1:5888978/1‑93 (MQ=255)
ctGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAg > 2:5242213/1‑93 (MQ=255)
cGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGaa < 1:6246251/93‑1 (MQ=255)
tgtCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAg > 1:1477568/1‑93 (MQ=255)
cAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCa < 2:2384951/93‑1 (MQ=255)
cAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCa > 1:5232789/1‑93 (MQ=255)
cAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTATACAGCGCGTAGGAAAGCCa < 1:2279202/93‑1 (MQ=255)
aGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAc < 2:3571613/93‑1 (MQ=255)
gcgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACg < 1:4595988/93‑1 (MQ=255)
gcgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACg < 1:163351/93‑1 (MQ=255)
cgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACgg < 1:2105346/93‑1 (MQ=255)
cgcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACgg < 1:430557/93‑1 (MQ=255)
gcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGgc < 2:4709746/93‑1 (MQ=255)
gcACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGgc > 1:3887963/1‑93 (MQ=255)
aCCCATGGTTTTCAGTTCATAACCCGCCCAGGTTGCCACTTCTTCACTGCGTGTGCTATCCGGTTTGTACAGCGCGTAGGAAAGCGACGgcgc > 2:2744320/1‑93 (MQ=255)
cATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAAt > 1:1750794/1‑93 (MQ=255)
cATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAAt > 2:2900593/1‑93 (MQ=255)
aTGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATg < 2:4535910/93‑1 (MQ=255)
aTGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATg > 1:464847/1‑93 (MQ=255)
tGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGa > 2:165017/1‑93 (MQ=255)
ggTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGAt < 1:1875407/93‑1 (MQ=255)
tttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAg > 2:3841258/1‑93 (MQ=255)
ttCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGc < 2:5148875/93‑1 (MQ=255)
aGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAg < 1:2853997/93‑1 (MQ=255)
aGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAg > 1:5323409/1‑93 (MQ=255)
gTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGa < 2:2704588/93‑1 (MQ=255)
gTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGa < 2:5873297/93‑1 (MQ=255)
tcatcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 1:4797762/1‑93 (MQ=255)
tcatcaCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 1:5019371/1‑93 (MQ=255)
caCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAccc > 2:2186733/1‑93 (MQ=255)
caCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAccc > 2:6138089/1‑93 (MQ=255)
gcccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcccc < 1:106052/92‑1 (MQ=255)
ccccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcccc < 1:2429171/92‑1 (MQ=255)
aCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAcccc > 1:5749914/1‑93 (MQ=255)
ccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCaa < 1:4783749/93‑1 (MQ=255)
ccGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCaa < 1:2890177/93‑1 (MQ=255)
cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc < 1:513103/93‑1 (MQ=255)
cGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc < 2:4243509/93‑1 (MQ=255)
cccAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCg > 2:1208238/1‑93 (MQ=255)
cAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGc > 1:3249067/1‑93 (MQ=255)
aGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCa < 2:1929739/93‑1 (MQ=255)
ggTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAg < 1:4558810/93‑1 (MQ=255)
ggTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAg < 2:2970407/93‑1 (MQ=255)
ggTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAg < 1:2180719/93‑1 (MQ=255)
gTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAgg > 1:3521996/1‑93 (MQ=255)
gTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAgg > 2:4959371/1‑93 (MQ=255)
ccACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGGAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGc > 1:4090946/1‑93 (MQ=255)
ccACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGc > 2:832897/1‑93 (MQ=255)
cACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACTGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCa > 2:1667841/1‑93 (MQ=255)
cACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCa > 1:2024670/1‑93 (MQ=255)
cACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCa < 2:1535180/93‑1 (MQ=255)
aCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCag < 2:798054/93‑1 (MQ=255)
cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga > 1:1281250/1‑93 (MQ=255)
cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga > 1:874849/1‑93 (MQ=255)
cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga < 2:3723582/93‑1 (MQ=255)
cttcttCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCaga < 1:3048613/93‑1 (MQ=255)
ttcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCagag < 1:3310151/93‑1 (MQ=255)
tcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg < 2:4286970/93‑1 (MQ=255)
tcttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg < 1:6275831/93‑1 (MQ=255)
cttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGa > 1:11475/1‑93 (MQ=255)
ttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGaa < 2:653914/93‑1 (MQ=255)
ttcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGaa > 2:3378921/1‑93 (MQ=255)
tcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAc < 2:4076164/93‑1 (MQ=255)
tcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAc < 2:1142089/93‑1 (MQ=255)
tcACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAc > 1:4253372/1‑93 (MQ=255)
tcACTGTGTGTGATTTCCGGTTTGGACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAc < 1:3454903/93‑1 (MQ=255)
aCTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAccc > 1:342953/1‑92 (MQ=255)
aCTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCa > 1:2776846/1‑93 (MQ=255)
cTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGCAGCAGAGGAACCAc > 1:5402388/1‑93 (MQ=255)
cTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCAc < 1:2251148/93‑1 (MQ=255)
cTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCAc < 1:5956879/93‑1 (MQ=255)
tgtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATACCCCCAACCGGCAGGAAGCAGAGGAACCACt < 1:4919200/93‑1 (MQ=255)
tgtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACt > 2:278322/1‑93 (MQ=255)
gtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTg > 1:4550562/1‑93 (MQ=255)
gtgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTg > 2:262137/1‑93 (MQ=255)
tgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGc > 2:3050021/1‑93 (MQ=255)
tgtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGc < 2:4483577/93‑1 (MQ=255)
ttgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCa < 1:4779362/92‑1 (MQ=255)
gtgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCa < 2:1845794/93‑1 (MQ=255)
tgtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCaa > 2:5482335/1‑93 (MQ=255)
gtgATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAGCCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAc < 1:3544448/93‑1 (MQ=255)
gATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCa < 1:5297021/93‑1 (MQ=255)
atgtCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAACCAGAGGAACCACTGCAACCAg < 1:6252698/90‑1 (MQ=255)
aTTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCATTGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAg > 1:603621/1‑93 (MQ=255)
tttCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGc < 1:2595041/93‑1 (MQ=255)
ttCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCt > 1:2479495/1‑93 (MQ=255)
ccGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTaa > 2:4569477/1‑93 (MQ=255)
cGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAAt > 2:174260/1‑93 (MQ=255)
ggTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATc < 1:5997469/93‑1 (MQ=255)
ggTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATc < 1:371834/93‑1 (MQ=255)
gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt > 2:5087272/1‑93 (MQ=255)
gTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCt < 1:5583836/93‑1 (MQ=255)
tttGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTg < 2:5171464/93‑1 (MQ=255)
ttGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGACCCACTGCAACCAGCTAATCTgg < 1:1128743/93‑1 (MQ=255)
gTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAGCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGAt < 1:3383065/93‑1 (MQ=255)
gTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGAt < 2:227237/93‑1 (MQ=255)
aGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCg < 1:5004357/93‑1 (MQ=255)
|
TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCG > NC_000913/644944‑645123
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCAA > NC_000913/644941‑645127
|
CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCG < SRR4302533.2420363/94‑1 (MQ=60)
CTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTATAGCGCG > SRR4302533.3260792/1‑94 (MQ=60)
CTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCG > SRR4302533.5715542/1‑94 (MQ=60)
CTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCG > SRR4302533.5457793/1‑94 (MQ=60)
TCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGT < SRR4302533.945764/94‑1 (MQ=60)
TCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAG > SRR4302533.5924558/1‑94 (MQ=60)
CTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGG > SRR4302533.5283478/1‑94 (MQ=60)
CGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAA < SRR4302533.6283635/94‑1 (MQ=60)
CGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAA < SRR4302533.1393098/94‑1 (MQ=60)
GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG < SRR4302533.901630/94‑1 (MQ=60)
GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG > SRR4302533.4697772/1‑94 (MQ=60)
GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG > SRR4302533.1486496/1‑94 (MQ=60)
GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG > SRR4302533.4824466/1‑94 (MQ=60)
GTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAG > SRR4302533.5022561/1‑94 (MQ=60)
GTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCC < SRR4302533.5349750/94‑1 (MQ=60)
TCAGCGCACCCATGGTTTTCAGTTCATCGCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCA < SRR4302533.3468699/94‑1 (MQ=60)
TCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCA > SRR4302533.5264259/1‑94 (MQ=60)
CAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAC > SRR4302533.2210287/1‑94 (MQ=60)
CAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCAC < SRR4302533.5806146/94‑1 (MQ=60)
CAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTATACAGCGCGTAGGAAAGCCAC < SRR4302533.2293316/94‑1 (MQ=60)
AGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCAACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACG < SRR4302533.4271553/94‑1 (MQ=60)
GCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGG < SRR4302533.4623829/94‑1 (MQ=60)
GCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGG < SRR4302533.164391/94‑1 (MQ=60)
CGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGC < SRR4302533.433125/94‑1 (MQ=60)
CGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGC > SRR4302533.3911684/1‑94 (MQ=60)
CGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGC < SRR4302533.2118329/94‑1 (MQ=60)
ACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCA > SRR4302533.3049609/1‑94 (MQ=60)
CCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAAT > SRR4302533.1761455/1‑94 (MQ=60)
CATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATG > SRR4302533.467622/1‑94 (MQ=60)
CATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATG < SRR4302533.4861869/94‑1 (MQ=60)
GGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATA < SRR4302533.1886835/94‑1 (MQ=60)
GTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAA < SRR4302533.4809492/94‑1 (MQ=60)
GTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAA < SRR4302533.3200379/94‑1 (MQ=60)
TTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAG > SRR4302533.3648635/1‑94 (MQ=60)
TTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAG > SRR4302533.5668605/1‑94 (MQ=60)
TTTCAGTTCATCACCCGCCCAGATTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGC > SRR4302533.6290958/1‑94 (MQ=60)
CAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAG < SRR4302533.2467087/94‑1 (MQ=60)
CAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAG < SRR4302533.5218808/94‑1 (MQ=60)
CAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAG > SRR4302533.5355309/1‑94 (MQ=60)
AGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGA < SRR4302533.5211179/94‑1 (MQ=60)
AGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGA < SRR4302533.2871559/94‑1 (MQ=60)
GTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGAT > SRR4302533.1879822/1‑94 (MQ=60)
TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA > SRR4302533.4826823/1‑94 (MQ=60)
TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA < SRR4302533.1113498/94‑1 (MQ=60)
TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA > SRR4302533.5049772/1‑94 (MQ=60)
TTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA < SRR4302533.4655227/94‑1 (MQ=60)
CATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAAC < SRR4302533.493306/94‑1 (MQ=60)
ATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACC > SRR4302533.4307110/1‑94 (MQ=60)
TCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCC < SRR4302533.348498/94‑1 (MQ=60)
TCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCC < SRR4302533.2372490/94‑1 (MQ=60)
CACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCC > SRR4302533.1602070/1‑94 (MQ=60)
CACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCC > SRR4302533.5784601/1‑94 (MQ=60)
CACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCC < SRR4302533.1711135/94‑1 (MQ=60)
GCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA < SRR4302533.106711/94‑1 (MQ=60)
CCCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA < SRR4302533.2444188/94‑1 (MQ=60)
ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA < SRR4302533.2606150/94‑1 (MQ=60)
ACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCA < SRR4302533.6186231/94‑1 (MQ=60)
CCCGCCCAGGTGGCCTCTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAA < SRR4302533.229333/94‑1 (MQ=60)
CCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAC < SRR4302533.4812726/94‑1 (MQ=60)
CCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAC < SRR4302533.2907945/94‑1 (MQ=60)
CGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACC < SRR4302533.516153/94‑1 (MQ=60)
CGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACC < SRR4302533.3414876/94‑1 (MQ=60)
CCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG > SRR4302533.3552594/1‑94 (MQ=60)
CCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGG < SRR4302533.4579742/94‑1 (MQ=60)
CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC > SRR4302533.3372684/1‑94 (MQ=60)
CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC > SRR4302533.3863386/1‑94 (MQ=60)
CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC > SRR4302533.3269100/1‑94 (MQ=60)
CCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGC > SRR4302533.2141168/1‑94 (MQ=60)
GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG > SRR4302533.3543705/1‑94 (MQ=60)
GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG < SRR4302533.835449/94‑1 (MQ=60)
GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG < SRR4302533.4586458/94‑1 (MQ=60)
GGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGG < SRR4302533.2194165/94‑1 (MQ=60)
TGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAG < SRR4302533.429164/94‑1 (MQ=60)
GCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGGAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGC > SRR4302533.4115849/1‑94 (MQ=60)
GCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCGACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGC > SRR4302533.5041257/1‑94 (MQ=60)
CCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCA < SRR4302533.2266442/94‑1 (MQ=60)
CCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCA > SRR4302533.2037170/1‑94 (MQ=60)
ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATACCCCCAACCGGCAGGAAGCAGA < SRR4302533.2815400/94‑1 (MQ=60)
ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGA > SRR4302533.879984/1‑94 (MQ=60)
ACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGA > SRR4302533.1288958/1‑94 (MQ=60)
CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCACGATAACCCCAACCGGCAGGAAGCAGAG < SRR4302533.5990509/94‑1 (MQ=60)
CTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAG < SRR4302533.3067277/94‑1 (MQ=60)
TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG > SRR4302533.6003017/1‑94 (MQ=60)
TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG < SRR4302533.2696404/94‑1 (MQ=60)
TTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGG < SRR4302533.3330589/94‑1 (MQ=60)
TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA < SRR4302533.6313306/94‑1 (MQ=60)
TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA > SRR4302533.11566/1‑94 (MQ=60)
TCTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGA < SRR4302533.5838247/94‑1 (MQ=60)
CTTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAA > SRR4302533.3315224/1‑94 (MQ=60)
TTCACTGTGTGTGATTTCCGGTTTTTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAC > SRR4302533.2094797/1‑94 (MQ=60)
TTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAC > SRR4302533.4279026/1‑94 (MQ=60)
TTCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAAC < SRR4302533.3587080/94‑1 (MQ=60)
TCACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACC > SRR4302533.3938202/1‑94 (MQ=60)
TCACTGTGTGTGATTTCCGGTTTGGACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACC < SRR4302533.3476228/94‑1 (MQ=60)
CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGCACCA > SRR4302533.347121/1‑94 (MQ=60)
CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCC > SRR4302533.345049/1‑94 (MQ=60)
CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCA > SRR4302533.2793906/1‑94 (MQ=60)
CACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCA > SRR4302533.2793904/1‑94 (MQ=60)
ACTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGCAGCAGAGGAACCAC > SRR4302533.5434851/1‑94 (MQ=60)
CTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACT < SRR4302533.5992913/94‑1 (MQ=60)
CTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACT < SRR4302533.551282/94‑1 (MQ=60)
CTGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACT < SRR4302533.2265063/94‑1 (MQ=60)
TGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATACCCCCAACCGGCAGGAAGCAGAGGAACCACTG < SRR4302533.4948998/94‑1 (MQ=60)
TGTGTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTG > SRR4302533.4578158/1‑94 (MQ=60)
TTGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAA < SRR4302533.4808312/94‑1 (MQ=60)
TGTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAAC < SRR4302533.1147878/94‑1 (MQ=60)
GTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAGCCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACC < SRR4302533.3566295/94‑1 (MQ=60)
GTGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACC > SRR4302533.5118144/1‑94 (MQ=60)
GTGATTGCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAGCCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACC < SRR4302533.4434639/94‑1 (MQ=60)
TGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCA < SRR4302533.1263246/94‑1 (MQ=60)
TGATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCA > SRR4302533.5731641/1‑94 (MQ=60)
GATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCATTGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAG > SRR4302533.607167/1‑94 (MQ=60)
GATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAG < SRR4302533.5328746/94‑1 (MQ=60)
GATTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAG < SRR4302533.5393365/94‑1 (MQ=60)
ATGTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAACCAGAGGAACCACTGCAACCAGC < SRR4302533.6290099/94‑1 (MQ=60)
TTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCT < SRR4302533.2610990/94‑1 (MQ=60)
TTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCT > SRR4302533.2494786/1‑94 (MQ=60)
TTTCCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCT > SRR4302533.6072622/1‑94 (MQ=60)
CCGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAAT < SRR4302533.1467391/94‑1 (MQ=60)
CGGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATC > SRR4302533.6288804/1‑94 (MQ=60)
GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT < SRR4302533.374077/94‑1 (MQ=60)
GGTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCT < SRR4302533.6033794/94‑1 (MQ=60)
GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG < SRR4302533.4627201/94‑1 (MQ=60)
GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG < SRR4302533.4599612/94‑1 (MQ=60)
GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG < SRR4302533.5617576/94‑1 (MQ=60)
GTTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTG < SRR4302533.2874098/94‑1 (MQ=60)
TTTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGG < SRR4302533.6135626/94‑1 (MQ=60)
TTGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGACCCACTGCAACCAGCTAATCTGGA < SRR4302533.1135449/94‑1 (MQ=60)
TGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGAT < SRR4302533.189592/94‑1 (MQ=60)
TGTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGAT < SRR4302533.1899321/94‑1 (MQ=60)
GTACAGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAGCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATA < SRR4302533.3403952/94‑1 (MQ=60)
AGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGG < SRR4302533.5034685/94‑1 (MQ=60)
AGCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGG > SRR4302533.3270137/1‑94 (MQ=60)
GCGCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGC < SRR4302533.1436158/94‑1 (MQ=60)
GCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCAA < SRR4302533.3053241/94‑1 (MQ=60)
GCGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCAA < SRR4302533.3505074/94‑1 (MQ=60)
|
CACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCAA > NC_000913/644941‑645127
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
