Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	651,666	T→C	V70A (GTC→GCC)	citA →	putative sensor‑type protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	651,666	0	T	C	99.8%	1368.3 / ‑5.0	415	V70A (GTC→GCC)	citA	putative sensor‑type protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (181/233); total (181/234)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.73e-01

Only 100 of 432 total aligned reads displayed.

ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG  >  NC_000913/651576‑651758

 ttttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAt                                                                                           >  2:4992423/1‑93 (MQ=255)

  tttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtc                                                                                          <  2:7259583/93‑1 (MQ=255)

  tttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtc                                                                                          <  1:8780129/93‑1 (MQ=255)

  tttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtc                                                                                          <  2:264732/93‑1 (MQ=255)

   ttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtct                                                                                         <  1:8677679/93‑1 (MQ=255)

     aCGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATctct                                                                                       >  2:9103437/1‑93 (MQ=255)

     aCGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATctct                                                                                       <  2:3107220/93‑1 (MQ=255)

      cGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTg                                                                                      <  2:8959760/93‑1 (MQ=255)

      cGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTg                                                                                      <  2:453084/93‑1 (MQ=255)

        gCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCg                                                                                    >  2:7696834/1‑93 (MQ=255)

            gTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGa                                                                                >  1:6914119/1‑93 (MQ=255)

            gTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGa                                                                                <  1:6625974/93‑1 (MQ=255)

            gTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGa                                                                                >  1:9307246/1‑93 (MQ=255)

               ttGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGaaaa                                                                             <  2:1575752/93‑1 (MQ=255)

                tGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAc                                                                            <  1:5455935/93‑1 (MQ=255)

                  aGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgc                                                                          >  2:2810408/1‑93 (MQ=255)

                   ggACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgcg                                                                         <  1:3266635/93‑1 (MQ=255)

                   ggACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgcg                                                                         <  2:8528350/93‑1 (MQ=255)

                   ggACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgcg                                                                         >  1:7431650/1‑93 (MQ=255)

                    gACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGt                                                                        <  2:2129802/93‑1 (MQ=255)

                      cTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGa                                                                      >  2:4476680/1‑93 (MQ=255)

                      cTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGa                                                                      <  2:6566098/93‑1 (MQ=255)

                       tATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAc                                                                     >  2:611205/1‑93 (MQ=255)

                       tATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAc                                                                     >  2:8110915/1‑93 (MQ=255)

                            aaCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGCGAAAACGCGTGACTACaa                                                                >  1:8901408/1‑93 (MQ=255)

                             aCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa                                                               <  1:3133035/93‑1 (MQ=255)

                             aCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa                                                               <  1:7337077/93‑1 (MQ=255)

                             aCGCTTCATGTACGCGACATCGGAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa                                                               <  1:4824468/93‑1 (MQ=255)

                               gCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACg                                                             >  1:4892001/1‑93 (MQ=255)

                               gCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACg                                                             <  1:8053411/93‑1 (MQ=255)

                                     tGTACGCGACATGGCAATGAGTCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGc                                                       <  2:3231612/93‑1 (MQ=255)

                                     tGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGc                                                       >  1:4386450/1‑93 (MQ=255)

                                     tGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGc                                                       >  1:9507996/1‑93 (MQ=255)

                                      gTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCg                                                      >  1:290395/1‑93 (MQ=255)

                                       tACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGa                                                     <  1:3658821/93‑1 (MQ=255)

                                            gACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATc                                                >  1:3744052/1‑93 (MQ=255)

                                             aCATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCg                                               >  2:9608779/1‑93 (MQ=255)

                                               aTGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAGCGCGTGACTACAAACGGCTGGGGAACATGGCt                                             >  2:2535626/1‑93 (MQ=255)

                                               aTGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCt                                             >  2:1751123/1‑93 (MQ=255)

                                               aTGGCAATGAATCAGGCGAAAATTATTGACTCCCATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGCCCATCGcc                                             >  1:5272959/1‑92 (MQ=255)

                                                tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa                                            >  1:7190467/1‑93 (MQ=255)

                                                tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa                                            >  2:4753107/1‑93 (MQ=255)

                                                tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa                                            >  1:7647518/1‑93 (MQ=255)

                                                tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa                                            >  2:7831852/1‑93 (MQ=255)

                                                tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa                                            >  1:8416300/1‑93 (MQ=255)

                                                 ggCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAACACGCGTGACTACAAACGGCTGGCGACCATCGCTaa                                           <  1:1818237/93‑1 (MQ=255)

                                                  gCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAAc                                          >  1:5167402/1‑93 (MQ=255)

                                                   cAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACa                                         >  1:1489269/1‑93 (MQ=255)

                                                    caTGACTCAGGAGAAAAGTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACaa                                        <  1:1368144/92‑1 (MQ=255)

                                                    aaTGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCAGCGCTAACaa                                        >  1:3577652/1‑93 (MQ=255)

                                                     aTGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACaaa                                       <  1:7021181/93‑1 (MQ=255)

                                                     aTGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACaaa                                       >  2:8268684/1‑93 (MQ=255)

                                                      tGAATCAGGCGAAAATTATTGCCTCCCATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAt                                      >  2:5379846/1‑93 (MQ=255)

                                                        aaTCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCTGTGAAAACGCGTGACTCCAAACGGCTGGCGACCATCGCTAACAAATTa                                    <  1:6309437/93‑1 (MQ=255)

                                                          tCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACa                                  <  2:704200/93‑1 (MQ=255)

                                                           cAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACaa                                 <  2:13801/93‑1 (MQ=255)

                                                            aGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACaaa                                >  1:6195342/1‑93 (MQ=255)

                                                            aGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACaaa                                <  1:2667746/93‑1 (MQ=255)

                                                              gCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAaga                              <  1:2121967/93‑1 (MQ=255)

                                                              gCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAaga                              <  2:820747/93‑1 (MQ=255)

                                                              gCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAaga                              <  1:3900379/93‑1 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            <  1:1229755/93‑1 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            <  2:5828413/93‑1 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            >  1:8205726/1‑93 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            <  1:6424562/93‑1 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            <  1:6789037/93‑1 (MQ=255)

                                                                gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga                            <  2:3587036/93‑1 (MQ=255)

                                                                 aaaaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAt                           >  2:7408273/1‑93 (MQ=255)

                                                                 aaaaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAt                           >  2:9250309/1‑93 (MQ=255)

                                                                  aaaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATa                          <  1:3511686/93‑1 (MQ=255)

                                                                   aaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAc                         >  2:4147317/1‑93 (MQ=255)

                                                                   aaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAc                         <  1:9895037/93‑1 (MQ=255)

                                                                    attattGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAcc                        <  2:683542/93‑1 (MQ=255)

                                                                    attattGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAcc                        >  2:5490623/1‑93 (MQ=255)

                                                                     ttattGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCg                       <  2:1971006/93‑1 (MQ=255)

                                                                      tattGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGa                      <  1:9759151/93‑1 (MQ=255)

                                                                      tattGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGa                      <  2:6295388/93‑1 (MQ=255)

                                                                       attGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAt                     <  1:10021121/93‑1 (MQ=255)

                                                                       attGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAt                     <  2:6786996/93‑1 (MQ=255)

                                                                       attGCCGCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGCCGACCATCGCTAACAAATTCCAAAGAGATACCGAt                     <  1:9644856/93‑1 (MQ=255)

                                                                         tGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAttt                   >  1:1959747/1‑93 (MQ=255)

                                                                          gCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAtttt                  <  2:9443888/93‑1 (MQ=255)

                                                                          gCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAtttt                  <  2:2380398/93‑1 (MQ=255)

                                                                          gCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAtttt                  <  1:1552549/93‑1 (MQ=255)

                                                                           ccTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTg                 >  1:5914985/1‑93 (MQ=255)

                                                                           ccTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTg                 >  1:3995273/1‑93 (MQ=255)

                                                                            cTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGa                <  1:7791270/93‑1 (MQ=255)

                                                                             tCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAt               >  1:569047/1‑93 (MQ=255)

                                                                               cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa             <  1:5108315/93‑1 (MQ=255)

                                                                               cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa             <  1:910137/93‑1 (MQ=255)

                                                                                aaTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAt            <  2:1073695/93‑1 (MQ=255)

                                                                                 aTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAtg           >  1:1714802/1‑93 (MQ=255)

                                                                                 aTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAtg           >  1:2388995/1‑93 (MQ=255)

                                                                                    aCAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtgg        >  1:6018248/1‑93 (MQ=255)

                                                                                     cAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtggt       >  1:2745756/1‑93 (MQ=255)

                                                                                      aGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtggtg      >  2:3703930/1‑93 (MQ=255)

                                                                                       gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa     >  2:8874478/1‑93 (MQ=255)

                                                                                       gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa     >  2:5222645/1‑93 (MQ=255)

                                                                                       gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa     <  1:7093742/93‑1 (MQ=255)

                                                                                          tCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTg  <  1:4732158/93‑1 (MQ=255)

ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG  >  NC_000913/651576‑651758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 265 total aligned reads displayed.

AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  >  NC_000913/651573‑651759

AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGC                                                                                               >  SRR4302540.10042157/1‑94 (MQ=60)

AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGC                                                                                               <  SRR4302540.9148684/94‑1 (MQ=60)

 ATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCC                                                                                              >  SRR4302540.7463528/1‑94 (MQ=60)

  TATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCA                                                                                             <  SRR4302540.3179478/94‑1 (MQ=60)

   ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAT                                                                                            <  SRR4302540.1941102/94‑1 (MQ=60)

   ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAT                                                                                            >  SRR4302540.5906312/1‑94 (MQ=60)

   ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAT                                                                                            <  SRR4302540.6164141/94‑1 (MQ=60)

    TTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATC                                                                                           <  SRR4302540.6943702/94‑1 (MQ=60)

    TTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATC                                                                                           >  SRR4302540.6792862/1‑94 (MQ=60)

     TTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCT                                                                                          <  SRR4302540.8881790/94‑1 (MQ=60)

      TTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTC                                                                                         <  SRR4302540.8778460/94‑1 (MQ=60)

      TTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTC                                                                                         >  SRR4302540.7054627/1‑94 (MQ=60)

       TACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCT                                                                                        <  SRR4302540.1735438/94‑1 (MQ=60)

          TGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCTAAGATTATTGTCTCCAATGACAGTCCCATCTCTGAG                                                                                     >  SRR4302540.7263489/1‑94 (MQ=60)

          GGCCAGTTTTGAGGACTATTTAACGCTTCATGTGCGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCG                                                                                     >  SRR4302540.729275/1‑94 (MQ=60)

          GGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCG                                                                                     <  SRR4302540.8703419/94‑1 (MQ=60)

             CAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTG                                                                                  <  SRR4302540.7093784/94‑1 (MQ=60)

             CAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTG                                                                                  >  SRR4302540.1836494/1‑94 (MQ=60)

              AGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGA                                                                                 >  SRR4302540.9418382/1‑94 (MQ=60)

               GTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAA                                                                                <  SRR4302540.6699330/94‑1 (MQ=60)

               GTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAA                                                                                <  SRR4302540.3551967/94‑1 (MQ=60)

                TTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAA                                                                               >  SRR4302540.8534732/1‑94 (MQ=60)

                  TTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAC                                                                             <  SRR4302540.3726155/94‑1 (MQ=60)

                  TTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAC                                                                             <  SRR4302540.5509640/94‑1 (MQ=60)

                  TTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAC                                                                             <  SRR4302540.3212084/94‑1 (MQ=60)

                  TTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAC                                                                             <  SRR4302540.932778/94‑1 (MQ=60)

                   TGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACG                                                                            <  SRR4302540.5515992/94‑1 (MQ=60)

                   TGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACG                                                                            >  SRR4302540.1412899/1‑94 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          >  SRR4302540.2898723/1‑94 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          >  SRR4302540.9618970/1‑94 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          <  SRR4302540.1937467/94‑1 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          >  SRR4302540.7825863/1‑94 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          >  SRR4302540.7028175/1‑94 (MQ=60)

                     AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG                                                                          >  SRR4302540.7514439/1‑94 (MQ=60)

                      GGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGT                                                                         <  SRR4302540.3302280/94‑1 (MQ=60)

                       GACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTG                                                                        <  SRR4302540.2165088/94‑1 (MQ=60)

                       GACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTG                                                                        <  SRR4302540.8396026/94‑1 (MQ=60)

                        ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA                                                                       >  SRR4302540.1540126/1‑94 (MQ=60)

                        ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA                                                                       <  SRR4302540.7780486/94‑1 (MQ=60)

                         CTATTTAACGCTTCATGTACGCGGCATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC                                                                      >  SRR4302540.1868289/1‑94 (MQ=60)

                         CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC                                                                      <  SRR4302540.7332546/94‑1 (MQ=60)

                         CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC                                                                      >  SRR4302540.2295867/1‑94 (MQ=60)

                         CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC                                                                      >  SRR4302540.1307588/1‑94 (MQ=60)

                          TATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT                                                                     >  SRR4302540.3448697/1‑94 (MQ=60)

                           ATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTA                                                                    >  SRR4302540.4621351/1‑94 (MQ=60)

                           ATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTA                                                                    >  SRR4302540.4692313/1‑94 (MQ=60)

                            TTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTAC                                                                   >  SRR4302540.2700131/1‑94 (MQ=60)

                             TTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACA                                                                  <  SRR4302540.2562800/94‑1 (MQ=60)

                              TAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGCGAAAACGCGTGACTACAA                                                                 >  SRR4302540.9004450/1‑94 (MQ=60)

                               AACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAA                                                                >  SRR4302540.3817350/1‑94 (MQ=60)

                                ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC                                                               <  SRR4302540.5178412/94‑1 (MQ=60)

                                ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC                                                               <  SRR4302540.3167220/94‑1 (MQ=60)

                                ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC                                                               <  SRR4302540.4876131/94‑1 (MQ=60)

                                ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC                                                               >  SRR4302540.2269434/1‑94 (MQ=60)

                                 CGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACG                                                              >  SRR4302540.5335925/1‑94 (MQ=60)

                                 CGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACG                                                              >  SRR4302540.4944608/1‑94 (MQ=60)

                                 CGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACG                                                              >  SRR4302540.1676847/1‑94 (MQ=60)

                                 CGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACG                                                              >  SRR4302540.4258927/1‑94 (MQ=60)

                                 CGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACG                                                              <  SRR4302540.6940408/94‑1 (MQ=60)

                                  GCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGG                                                             >  SRR4302540.516053/1‑94 (MQ=60)

                                  GCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGG                                                             <  SRR4302540.8146940/94‑1 (MQ=60)

                                  GCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGG                                                             <  SRR4302540.7366851/94‑1 (MQ=60)

                                  GCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGG                                                             <  SRR4302540.2996344/94‑1 (MQ=60)

                                   CTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGC                                                            >  SRR4302540.7124397/1‑94 (MQ=60)

                                   CTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGC                                                            >  SRR4302540.374558/1‑94 (MQ=60)

                                    TTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCT                                                           >  SRR4302540.607272/1‑94 (MQ=60)

                                    TTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCG                                                           >  SRR4302540.8863955/1‑94 (MQ=60)

                                     TCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTG                                                          >  SRR4302540.1353779/1‑94 (MQ=60)

                                     TCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTG                                                          <  SRR4302540.7575721/94‑1 (MQ=60)

                                      CATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGG                                                         >  SRR4302540.3844480/1‑94 (MQ=60)

                                      CATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGG                                                         >  SRR4302540.4824014/1‑94 (MQ=60)

                                       ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC                                                        <  SRR4302540.3559737/94‑1 (MQ=60)

                                       ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC                                                        >  SRR4302540.9620632/1‑94 (MQ=60)

                                       ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC                                                        >  SRR4302540.4434068/1‑94 (MQ=60)

                                       ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC                                                        >  SRR4302540.14810/1‑94 (MQ=60)

                                       ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC                                                        >  SRR4302540.1523831/1‑94 (MQ=60)

                                        TGTACGCGACATGTCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGTTGAAAACGCGTGACTACAAACGGCTGGCG                                                       <  SRR4302540.7425914/94‑1 (MQ=60)

                                        TGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCG                                                       <  SRR4302540.7759632/94‑1 (MQ=60)

                                        TGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCG                                                       <  SRR4302540.7633615/94‑1 (MQ=60)

                                         GTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGA                                                      <  SRR4302540.2442361/94‑1 (MQ=60)

                                         GTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGA                                                      >  SRR4302540.5326132/1‑94 (MQ=60)

                                         GTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGA                                                      >  SRR4302540.6510499/1‑94 (MQ=60)

                                          TACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGAC                                                     <  SRR4302540.3698879/94‑1 (MQ=60)

                                           ACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACC                                                    <  SRR4302540.6327475/94‑1 (MQ=60)

                                              CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC                                                 <  SRR4302540.6461868/94‑1 (MQ=60)

                                              CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC                                                 <  SRR4302540.6222037/94‑1 (MQ=60)

                                              CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC                                                 <  SRR4302540.9555965/94‑1 (MQ=60)

                                              CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC                                                 >  SRR4302540.3784913/1‑94 (MQ=60)

                                              CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC                                                 <  SRR4302540.4679113/94‑1 (MQ=60)

                                                 CATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCT                                              <  SRR4302540.4937843/94‑1 (MQ=60)

                                                 CATGGCAATGAATCAGGCGAAAATTATTGACTCCCATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGCCCATCGCC                                              >  SRR4302540.5330516/1‑94 (MQ=60)

                                                  ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA                                             >  SRR4302540.7270613/1‑94 (MQ=60)

                                                  ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA                                             >  SRR4302540.7733603/1‑94 (MQ=60)

                                                  ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA                                             <  SRR4302540.6974615/94‑1 (MQ=60)

                                                  ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA                                             <  SRR4302540.55967/94‑1 (MQ=60)

                                                  ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA                                             >  SRR4302540.8513988/1‑94 (MQ=60)

                                                    GGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAACACGCGTGACTACAAACGGCTGGCGACCATCGCTAAC                                           <  SRR4302540.1838107/94‑1 (MQ=60)

                                                    GGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAAC                                           >  SRR4302540.5223606/1‑94 (MQ=60)

                                                      CAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAA                                         <  SRR4302540.6624218/94‑1 (MQ=60)

                                                      CAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCAGCGCTAACAA                                         >  SRR4302540.3616729/1‑94 (MQ=60)

                                                        ATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAT                                       <  SRR4302540.8144512/94‑1 (MQ=60)

                                                        ATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAT                                       <  SRR4302540.642738/94‑1 (MQ=60)

                                                        ATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAT                                       <  SRR4302540.7099165/94‑1 (MQ=60)

                                                         TGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATT                                      <  SRR4302540.120899/94‑1 (MQ=60)

                                                           AATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCTGTGAAAACGCGTGACTCCAAACGGCTGGCGACCATCGCTAACAAATTAC                                    <  SRR4302540.6379698/94‑1 (MQ=60)

                                                            ATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACA                                   <  SRR4302540.3093762/94‑1 (MQ=60)

                                                            ATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACA                                   >  SRR4302540.1188289/1‑94 (MQ=60)

                                                             TCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAA                                  <  SRR4302540.5000087/94‑1 (MQ=60)

                                                             TCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAA                                  <  SRR4302540.2709248/94‑1 (MQ=60)

                                                              CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA                                 >  SRR4302540.6264316/1‑94 (MQ=60)

                                                              CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA                                 <  SRR4302540.3627806/94‑1 (MQ=60)

                                                              CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA                                 <  SRR4302540.203118/94‑1 (MQ=60)

                                                              CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA                                 >  SRR4302540.2827548/1‑94 (MQ=60)

                                                              CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA                                 <  SRR4302540.3264844/94‑1 (MQ=60)

                                                               AGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAG                                <  SRR4302540.3583444/94‑1 (MQ=60)

                                                               AGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAG                                <  SRR4302540.2696654/94‑1 (MQ=60)

                                                                 GCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAG                              <  SRR4302540.3942699/94‑1 (MQ=60)

                                                                  CGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGA                             <  SRR4302540.9817369/94‑1 (MQ=60)

                                                                  CGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGA                             >  SRR4302540.8301083/1‑94 (MQ=60)

                                                                  CGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGA                             <  SRR4302540.1452079/94‑1 (MQ=60)

                                                                  CGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGA                             <  SRR4302540.7257319/94‑1 (MQ=60)

                                                                  CGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGA                             <  SRR4302540.5229127/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            <  SRR4302540.4874944/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            <  SRR4302540.6864113/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            <  SRR4302540.4874945/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            >  SRR4302540.8914034/1‑94 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            >  SRR4302540.9274899/1‑94 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            <  SRR4302540.1242322/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            <  SRR4302540.6496070/94‑1 (MQ=60)

                                                                   GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT                            >  SRR4302540.556999/1‑94 (MQ=60)

                                                                    AAAATTATTTCCTCCAATGACAATGCCATCTCTGCGGTGAAAACCCGTGACTTCAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATA                           <  SRR4302540.1370353/94‑1 (MQ=60)

                                                                    AAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATA                           <  SRR4302540.2006970/94‑1 (MQ=60)

                                                                     AAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAC                          >  SRR4302540.7892246/1‑94 (MQ=60)

                                                                      AATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACC                         <  SRR4302540.9792895/94‑1 (MQ=60)

                                                                      AATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACC                         <  SRR4302540.10010591/94‑1 (MQ=60)

                                                                       ATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCG                        >  SRR4302540.9453501/1‑94 (MQ=60)

                                                                        TTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAATATACAAAGAGATACCGA                       >  SRR4302540.9062189/1‑94 (MQ=60)

                                                                        TTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGA                       >  SRR4302540.89530/1‑94 (MQ=60)

                                                                        TTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGA                       >  SRR4302540.287522/1‑94 (MQ=60)

                                                                         TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT                      <  SRR4302540.2666387/94‑1 (MQ=60)

                                                                         TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT                      <  SRR4302540.1550660/94‑1 (MQ=60)

                                                                         TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT                      <  SRR4302540.9873627/94‑1 (MQ=60)

                                                                          ATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATT                     <  SRR4302540.9758449/94‑1 (MQ=60)

                                                                          ATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATT                     <  SRR4302540.10137744/94‑1 (MQ=60)

                                                                          ATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATT                     <  SRR4302540.6334089/94‑1 (MQ=60)

                                                                           TTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTT                    >  SRR4302540.3012791/1‑94 (MQ=60)

                                                                            TGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTT                   <  SRR4302540.9911423/94‑1 (MQ=60)

                                                                             GCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTG                  <  SRR4302540.8427419/94‑1 (MQ=60)

                                                                             GCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTG                  <  SRR4302540.1569645/94‑1 (MQ=60)

                                                                             GCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTG                  >  SRR4302540.5980332/1‑94 (MQ=60)

                                                                             GCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTG                  >  SRR4302540.4038270/1‑94 (MQ=60)

                                                                              CCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGT                 >  SRR4302540.3685795/1‑94 (MQ=60)

                                                                              CCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGA                 <  SRR4302540.2057050/94‑1 (MQ=60)

                                                                               CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT                >  SRR4302540.3425920/1‑94 (MQ=60)

                                                                               CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT                >  SRR4302540.575229/1‑94 (MQ=60)

                                                                               CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT                <  SRR4302540.8503402/94‑1 (MQ=60)

                                                                               CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT                <  SRR4302540.7882345/94‑1 (MQ=60)

                                                                               CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT                >  SRR4302540.9903147/1‑94 (MQ=60)

                                                                                TCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATT               <  SRR4302540.7473475/94‑1 (MQ=60)

                                                                                 CCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACCAATTACAAAGAGATACCGATTTTGATTA              >  SRR4302540.8156358/1‑94 (MQ=60)

                                                                                 CCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTA              <  SRR4302540.1573322/94‑1 (MQ=60)

                                                                                 CCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTA              >  SRR4302540.10056720/1‑94 (MQ=60)

                                                                                 CCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTA              <  SRR4302540.5527679/94‑1 (MQ=60)

                                                                                  CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT             <  SRR4302540.919779/94‑1 (MQ=60)

                                                                                  CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT             <  SRR4302540.5163608/94‑1 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTAGAAAGAGATACCGATTTTGATTATG            <  SRR4302540.5984521/94‑1 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            <  SRR4302540.5222051/94‑1 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            <  SRR4302540.9724559/94‑1 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            >  SRR4302540.1733324/1‑94 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            <  SRR4302540.9724555/94‑1 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            >  SRR4302540.8196387/1‑94 (MQ=60)

                                                                                   AATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATG            <  SRR4302540.5939893/94‑1 (MQ=60)

                                                                                    ATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGT           <  SRR4302540.6855306/94‑1 (MQ=60)

                                                                                    ATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGT           >  SRR4302540.6646705/1‑94 (MQ=60)

                                                                                     TGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTG          <  SRR4302540.3936519/94‑1 (MQ=60)

                                                                                      GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCCTCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG         >  SRR4302540.4021411/1‑94 (MQ=60)

                                                                                      GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG         >  SRR4302540.6084998/1‑94 (MQ=60)

                                                                                      GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG         >  SRR4302540.6084999/1‑94 (MQ=60)

                                                                                      GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG         >  SRR4302540.7198405/1‑94 (MQ=60)

                                                                                       ACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGT        >  SRR4302540.2775411/1‑94 (MQ=60)

                                                                                       ACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGT        <  SRR4302540.5084814/94‑1 (MQ=60)

                                                                                         AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA      >  SRR4302540.4427809/1‑94 (MQ=60)

                                                                                         AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA      <  SRR4302540.9009521/94‑1 (MQ=60)

                                                                                         AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA      >  SRR4302540.3992226/1‑94 (MQ=60)

                                                                                         AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA      >  SRR4302540.339382/1‑94 (MQ=60)

                                                                                         AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA      >  SRR4302540.8788148/1‑94 (MQ=60)

                                                                                          GTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGAT     <  SRR4302540.7172682/94‑1 (MQ=60)

                                                                                          GTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGAT     <  SRR4302540.7172683/94‑1 (MQ=60)

                                                                                           TGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATT    <  SRR4302540.6028042/94‑1 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAATCGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGCTACCGATTTTGATTATGTGGTGATGG   >  SRR4302540.3067345/1‑94 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG   <  SRR4302540.9843402/94‑1 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG   <  SRR4302540.8844173/94‑1 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG   >  SRR4302540.3912400/1‑94 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG   >  SRR4302540.8954201/1‑94 (MQ=60)

                                                                                            GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG   <  SRR4302540.5949903/94‑1 (MQ=60)

                                                                                             TCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  <  SRR4302540.4782695/94‑1 (MQ=60)

                                                                                             CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  <  SRR4302540.1749872/94‑1 (MQ=60)

                                                                                             CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  >  SRR4302540.4893738/1‑94 (MQ=60)

                                                                                             CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  <  SRR4302540.7065846/94‑1 (MQ=60)

                                                                                             CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  <  SRR4302540.1965213/94‑1 (MQ=60)

AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG  >  NC_000913/651573‑651759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`