Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
651,666 |
T→C |
V70A (GTC→GCC) |
citA → |
putative sensor‑type protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 651,666 | 0 | T | C | 99.6%
| 743.4
/ ‑5.4
| 228 | V70A (GTC→GCC) | citA | putative sensor‑type protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (121/106); total (121/107) |
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 238 total aligned reads displayed.
ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > NC_000913/651576‑651755
|
atTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCa < 1:1546578/93‑1 (MQ=255)
tttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtc < 2:1207708/93‑1 (MQ=255)
ttACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtct > 1:825480/1‑93 (MQ=255)
tACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAtctc < 1:1163386/93‑1 (MQ=255)
aCGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATctct < 1:3504827/93‑1 (MQ=255)
cGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTg < 2:1372453/93‑1 (MQ=255)
ggCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGc < 2:2074652/93‑1 (MQ=255)
ggCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGc < 1:4416674/93‑1 (MQ=255)
ggCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGc < 2:6139034/93‑1 (MQ=255)
ccAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCgg < 1:18180/93‑1 (MQ=255)
cAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGt > 2:2833254/1‑93 (MQ=255)
gTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGa > 1:1352847/1‑93 (MQ=255)
ttGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGaaaa < 1:2417072/93‑1 (MQ=255)
tGAGCACTATTTAACGCTTCATGTACGCGACAGGGCAATGAATCAGGTGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAc < 1:658243/93‑1 (MQ=255)
gAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcg > 2:4715272/1‑93 (MQ=255)
gAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcg > 2:2314190/1‑93 (MQ=255)
gAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcg > 1:4293317/1‑93 (MQ=255)
aGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgc < 1:4709819/93‑1 (MQ=255)
ggACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAcgcg > 1:5525052/1‑93 (MQ=255)
gACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGt > 2:1241335/1‑93 (MQ=255)
gACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGt > 2:1103101/1‑93 (MQ=255)
aCTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTg > 2:3904315/1‑93 (MQ=255)
cTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGa < 1:2644775/93‑1 (MQ=255)
aTTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACt > 2:5899370/1‑93 (MQ=255)
aTTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACt > 1:1728718/1‑93 (MQ=255)
tttAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTa > 1:6121814/1‑93 (MQ=255)
tAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACa < 1:5437782/93‑1 (MQ=255)
aCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa < 1:3774082/93‑1 (MQ=255)
aCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa < 2:5838362/93‑1 (MQ=255)
aCGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACaaa > 2:576633/1‑93 (MQ=255)
cTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACgg > 1:4163986/1‑93 (MQ=255)
ttCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGc > 2:878782/1‑93 (MQ=255)
ttCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGc < 1:4853617/93‑1 (MQ=255)
tCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCt < 2:2802998/93‑1 (MQ=255)
tCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCt > 2:1005102/1‑93 (MQ=255)
cATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTg > 1:6230414/1‑93 (MQ=255)
aTGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTgg < 2:4327022/93‑1 (MQ=255)
aTGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTgg < 2:4240197/93‑1 (MQ=255)
tGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGc > 1:1025048/1‑93 (MQ=255)
tGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGc > 1:2365881/1‑93 (MQ=255)
tACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGa < 1:5061232/93‑1 (MQ=255)
tACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGa < 2:5468113/93‑1 (MQ=255)
aCGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGAc < 2:5372488/93‑1 (MQ=255)
cgcgACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGAcc > 2:2641887/1‑93 (MQ=255)
cgcgACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGAcc < 1:888246/93‑1 (MQ=255)
gcgACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCa > 2:4593055/1‑93 (MQ=255)
cgACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCAt < 1:6258612/93‑1 (MQ=255)
cgACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCAt < 1:3414219/93‑1 (MQ=255)
gACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGGGAGCaac > 2:4120720/1‑91 (MQ=255)
gACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATc < 2:871520/93‑1 (MQ=255)
gACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATc > 1:4583146/1‑93 (MQ=255)
cATGGCAATGAATCAGGCGAAAATTATTCCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGc < 1:5942263/93‑1 (MQ=255)
aTGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCt < 1:3686916/93‑1 (MQ=255)
tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa > 1:5779960/1‑93 (MQ=255)
tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa > 1:1578563/1‑93 (MQ=255)
tGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTa > 2:2246224/1‑93 (MQ=255)
gCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAAc < 1:5210475/93‑1 (MQ=255)
aaTGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACaa > 2:3623590/1‑93 (MQ=255)
tGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAt < 1:2546808/93‑1 (MQ=255)
tGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAt < 1:2848054/93‑1 (MQ=255)
gAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAtt > 1:4576806/1‑93 (MQ=255)
gAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAAtt < 2:765208/93‑1 (MQ=255)
aTCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTAc > 1:2994767/1‑93 (MQ=255)
tCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACa < 2:1986321/93‑1 (MQ=255)
tCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACa < 2:3136024/93‑1 (MQ=255)
aGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAACCGGCTGGCGACCATCGCTAACAAATTACaaa < 2:5228479/93‑1 (MQ=255)
aGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACaaa > 1:325191/1‑93 (MQ=255)
aGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACaaa > 2:3209430/1‑93 (MQ=255)
gCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAaga < 2:1734244/93‑1 (MQ=255)
gCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAaga < 1:2153899/93‑1 (MQ=255)
gAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAgaga < 2:1903666/93‑1 (MQ=255)
aaaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATa > 2:5559207/1‑93 (MQ=255)
aaTTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATAc < 2:4159093/93‑1 (MQ=255)
attGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAt < 2:439310/93‑1 (MQ=255)
attGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAt > 1:4514123/1‑93 (MQ=255)
attGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAt < 2:3298949/93‑1 (MQ=255)
gCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAtttt < 2:2505081/93‑1 (MQ=255)
tCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAt > 1:4910934/1‑93 (MQ=255)
tCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAt > 2:4034916/1‑93 (MQ=255)
tCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAt < 1:2023646/93‑1 (MQ=255)
tCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAt > 1:2061421/1‑93 (MQ=255)
ccAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAtt < 2:3091741/93‑1 (MQ=255)
ccAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAtt > 1:6184041/1‑93 (MQ=255)
cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa > 2:2965475/1‑93 (MQ=255)
cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa < 1:5173573/93‑1 (MQ=255)
cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa < 1:5300960/93‑1 (MQ=255)
cAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTa > 2:1050710/1‑93 (MQ=255)
aaTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAt > 2:4081286/1‑93 (MQ=255)
aaTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAt < 2:6154394/93‑1 (MQ=255)
aaTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAt > 2:374875/1‑93 (MQ=255)
aTGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAtg < 1:3904315/93‑1 (MQ=255)
gACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAtgtg > 2:5292712/1‑93 (MQ=255)
aCAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtgg < 2:2269941/93‑1 (MQ=255)
aCAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtgg > 1:1417165/1‑93 (MQ=255)
cAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtggt < 2:31656/93‑1 (MQ=255)
aGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATgtggtg < 1:3210575/93‑1 (MQ=255)
gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa > 2:241636/1‑93 (MQ=255)
gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa < 2:1778441/93‑1 (MQ=255)
gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa > 1:3709882/1‑93 (MQ=255)
gtgcCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGa > 1:710403/1‑93 (MQ=255)
|
ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > NC_000913/651576‑651755
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG > NC_000913/651573‑651759
|
AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGC > SRR4302533.2931945/1‑94 (MQ=60)
AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGC > SRR4302533.658795/1‑94 (MQ=60)
ATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCAT < SRR4302533.1555898/94‑1 (MQ=60)
TTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCT < SRR4302533.372209/94‑1 (MQ=60)
TTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCT > SRR4302533.830324/1‑94 (MQ=60)
TTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCCATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTC > SRR4302533.6752/1‑94 (MQ=60)
TACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCT < SRR4302533.1170364/94‑1 (MQ=60)
TACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCT > SRR4302533.1396158/1‑94 (MQ=60)
TACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCT < SRR4302533.743372/94‑1 (MQ=60)
ACGGTCAGTCTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTG < SRR4302533.873573/94‑1 (MQ=60)
ACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTG < SRR4302533.209795/94‑1 (MQ=60)
ACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTG < SRR4302533.4632107/94‑1 (MQ=60)
ACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTG < SRR4302533.3526434/94‑1 (MQ=60)
CGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGC > SRR4302533.2283985/1‑94 (MQ=60)
GGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCG < SRR4302533.4443378/94‑1 (MQ=60)
CCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGT < SRR4302533.18303/94‑1 (MQ=60)
AGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGA > SRR4302533.1360981/1‑94 (MQ=60)
AGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGA > SRR4302533.5344570/1‑94 (MQ=60)
GTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGACAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAA > SRR4302533.6272862/1‑94 (MQ=60)
TTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAAC < SRR4302533.2431998/94‑1 (MQ=60)
TGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACG > SRR4302533.4319138/1‑94 (MQ=60)
TGAGCACTATTTAACGCTTCATGTACGCGACAGGGCAATGAATCAGGTGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACG < SRR4302533.662123/94‑1 (MQ=60)
GAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGC > SRR4302533.2876663/1‑94 (MQ=60)
GAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGC > SRR4302533.966927/1‑94 (MQ=60)
AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG < SRR4302533.4738363/94‑1 (MQ=60)
AGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCG > SRR4302533.5558408/1‑94 (MQ=60)
ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA > SRR4302533.5145997/1‑94 (MQ=60)
ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA < SRR4302533.550215/94‑1 (MQ=60)
ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA < SRR4302533.941795/94‑1 (MQ=60)
ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA < SRR4302533.4552218/94‑1 (MQ=60)
ACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGA > SRR4302533.3838247/1‑94 (MQ=60)
CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC < SRR4302533.193961/94‑1 (MQ=60)
CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC < SRR4302533.3587274/94‑1 (MQ=60)
CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC < SRR4302533.6208368/94‑1 (MQ=60)
CTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGAC < SRR4302533.2661027/94‑1 (MQ=60)
TATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT > SRR4302533.4747312/1‑94 (MQ=60)
TATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT > SRR4302533.1739203/1‑94 (MQ=60)
TATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT < SRR4302533.4553574/94‑1 (MQ=60)
TATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT < SRR4302533.2389261/94‑1 (MQ=60)
TATTTAACGCTTCATGTACGCGACATGGAAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACT < SRR4302533.4605652/94‑1 (MQ=60)
ATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTA > SRR4302533.6158727/1‑94 (MQ=60)
TTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTAC > SRR4302533.1925199/1‑94 (MQ=60)
TAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGACAACGCGTGACTACAA > SRR4302533.1037263/1‑94 (MQ=60)
TAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAA < SRR4302533.5470535/94‑1 (MQ=60)
ACGCTTCATGTACGCGACATGTCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC < SRR4302533.2853818/94‑1 (MQ=60)
ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC < SRR4302533.3833006/94‑1 (MQ=60)
ACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAAC < SRR4302533.3797217/94‑1 (MQ=60)
GCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGG > SRR4302533.4189213/1‑94 (MQ=60)
TTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCT < SRR4302533.4883029/94‑1 (MQ=60)
TTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCT < SRR4302533.6161939/94‑1 (MQ=60)
TCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTG > SRR4302533.2611502/1‑94 (MQ=60)
TCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTG > SRR4302533.6267728/1‑94 (MQ=60)
CATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGG > SRR4302533.1430522/1‑94 (MQ=60)
ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACACACGGCTGGC > SRR4302533.5880911/1‑94 (MQ=60)
ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC > SRR4302533.1031073/1‑94 (MQ=60)
ATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGC > SRR4302533.2380516/1‑94 (MQ=60)
TGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCG > SRR4302533.5230116/1‑94 (MQ=60)
TACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGAC < SRR4302533.5091817/94‑1 (MQ=60)
CGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCA < SRR4302533.893460/94‑1 (MQ=60)
CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC < SRR4302533.2967721/94‑1 (MQ=60)
CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC > SRR4302533.4610913/1‑94 (MQ=60)
CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC < SRR4302533.6296036/94‑1 (MQ=60)
CGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATC < SRR4302533.3435313/94‑1 (MQ=60)
GACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCC > SRR4302533.4927338/1‑94 (MQ=60)
CATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCT > SRR4302533.5284868/1‑94 (MQ=60)
CATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCT < SRR4302533.1274432/94‑1 (MQ=60)
CATGGCAATGAATCAGGCGAAAATTATTCCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCT < SRR4302533.5978200/94‑1 (MQ=60)
ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA < SRR4302533.3709577/94‑1 (MQ=60)
ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA > SRR4302533.5814869/1‑94 (MQ=60)
ATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTA > SRR4302533.1588070/1‑94 (MQ=60)
GGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAAC < SRR4302533.5261523/94‑1 (MQ=60)
GGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAAC > SRR4302533.2558210/1‑94 (MQ=60)
GCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACA < SRR4302533.5241860/94‑1 (MQ=60)
AATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAA < SRR4302533.827909/94‑1 (MQ=60)
TGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATT < SRR4302533.2865579/94‑1 (MQ=60)
TGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATT < SRR4302533.2562478/94‑1 (MQ=60)
TGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATT > SRR4302533.4604544/1‑94 (MQ=60)
GAATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTA < SRR4302533.6345231/94‑1 (MQ=60)
AATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTAC > SRR4302533.3233777/1‑94 (MQ=60)
AATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTAC > SRR4302533.3013079/1‑94 (MQ=60)
ATCAGGCGAAAATTATTGCCTCCAATGACAGTGCCCTCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACA > SRR4302533.4120804/1‑94 (MQ=60)
TCAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAA < SRR4302533.164227/94‑1 (MQ=60)
CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA > SRR4302533.327174/1‑94 (MQ=60)
CAGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAA > SRR4302533.2038653/1‑94 (MQ=60)
AGGCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAG > SRR4302533.5128593/1‑94 (MQ=60)
GCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAG < SRR4302533.2167164/94‑1 (MQ=60)
GCGAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAG < SRR4302533.3505989/94‑1 (MQ=60)
GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT > SRR4302533.6253851/1‑94 (MQ=60)
GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT > SRR4302533.3777648/1‑94 (MQ=60)
GAAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGAT < SRR4302533.6127224/94‑1 (MQ=60)
AAAATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATA > SRR4302533.4837715/1‑94 (MQ=60)
AATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACC > SRR4302533.3357886/1‑94 (MQ=60)
ATTATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCG > SRR4302533.6271238/1‑94 (MQ=60)
TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT > SRR4302533.3109525/1‑94 (MQ=60)
TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT > SRR4302533.2192030/1‑94 (MQ=60)
TATTGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGAT > SRR4302533.4541458/1‑94 (MQ=60)
TGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACTGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTT < SRR4302533.3399606/94‑1 (MQ=60)
TGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTT > SRR4302533.1564159/1‑94 (MQ=60)
TGCCTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTT > SRR4302533.1810280/1‑94 (MQ=60)
CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT > SRR4302533.2074133/1‑94 (MQ=60)
CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT > SRR4302533.4940685/1‑94 (MQ=60)
CTCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGAT > SRR4302533.2591852/1‑94 (MQ=60)
TCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATT < SRR4302533.2036141/94‑1 (MQ=60)
TCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATT > SRR4302533.429655/1‑94 (MQ=60)
TCCAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATT > SRR4302533.6221170/1‑94 (MQ=60)
CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT < SRR4302533.5204828/94‑1 (MQ=60)
CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT > SRR4302533.4374150/1‑94 (MQ=60)
CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT > SRR4302533.4441954/1‑94 (MQ=60)
CAATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTAT < SRR4302533.5332718/94‑1 (MQ=60)
ATGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGT < SRR4302533.3928160/94‑1 (MQ=60)
TGACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTG < SRR4302533.5814640/94‑1 (MQ=60)
GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG < SRR4302533.1591297/94‑1 (MQ=60)
GACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGG > SRR4302533.1425738/1‑94 (MQ=60)
ACAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGT > SRR4302533.565210/1‑94 (MQ=60)
CAGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTG > SRR4302533.1410877/1‑94 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > SRR4302533.4998166/1‑94 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > SRR4302533.4536368/1‑94 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > SRR4302533.3732665/1‑94 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA < SRR4302533.3230350/94‑1 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > SRR4302533.714598/1‑94 (MQ=60)
AGTGCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGA > SRR4302533.3722531/1‑94 (MQ=60)
GCCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTG < SRR4302533.1931797/94‑1 (MQ=60)
GCATCTCTGCGGTGAAAGCGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGTTGATTGG < SRR4302533.3091592/94‑1 (MQ=60)
CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG > SRR4302533.3540292/1‑94 (MQ=60)
CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG < SRR4302533.1491523/94‑1 (MQ=60)
CCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG < SRR4302533.2783383/94‑1 (MQ=60)
|
AATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGG > NC_000913/651573‑651759
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
