Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 654,812 G→A A127V (GCC→GTC)  dcuC ← DcuC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913654,8120GA100.0% 1155.9 / NA 316A127V (GCC→GTC) dcuCDcuC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (163/153);  total (163/153)

Only 100 of 333 total aligned reads displayed.

ATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG  >  NC_000913/654722‑654901
                                                                                          |                                                                                         
aTACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACg                                                                                         >  2:4011246/1‑93 (MQ=255)
 tACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGa                                                                                        >  2:6628580/1‑93 (MQ=255)
  aCCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAgacgac                                                                                       <  2:8158813/93‑1 (MQ=255)
   ccAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACa                                                                                      >  2:5125856/1‑93 (MQ=255)
    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     >  1:1076984/1‑93 (MQ=255)
    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     >  1:6331168/1‑93 (MQ=255)
    cAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACaa                                                                                     <  1:2413795/93‑1 (MQ=255)
        gTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATa                                                                                 >  1:2140416/1‑93 (MQ=255)
         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:9766268/1‑93 (MQ=255)
         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:9031334/1‑93 (MQ=255)
         tttACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAg                                                                                >  2:1918311/1‑93 (MQ=255)
           tACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggc                                                                              >  2:3476054/1‑93 (MQ=255)
            aCCATCACCGGAAATAGGGGTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcg                                                                             >  2:8685041/1‑93 (MQ=255)
              cATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcggc                                                                           <  1:4500522/93‑1 (MQ=255)
              cATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAggcggc                                                                           <  2:5774842/93‑1 (MQ=255)
               aTCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCa                                                                          >  2:3211663/1‑93 (MQ=255)
                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  1:2918799/1‑93 (MQ=255)
                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  1:636764/1‑93 (MQ=255)
                tCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGCTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCaa                                                                         >  2:7150345/1‑93 (MQ=255)
                   ccGGGAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAatca                                                                      <  1:3505743/93‑1 (MQ=255)
                   ccGGAAATACGGTTGCCATCAGCAAACCACCCAGACCGGTTGCGGAAGAGACGCCTACAGACATCAGACAGACGACAAAATAGCCGGCAatca                                                                      <  2:4977056/93‑1 (MQ=255)
                     ggAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAatcatc                                                                    <  1:7917645/93‑1 (MQ=255)
                      gAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAAtcatca                                                                   >  1:3230572/1‑93 (MQ=255)
                        aaTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagc                                                                 >  1:7084491/1‑93 (MQ=255)
                        aaTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagc                                                                 >  1:1293369/1‑93 (MQ=255)
                         aTAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagca                                                                >  2:2644473/1‑93 (MQ=255)
                          tAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagcag                                                               <  2:3291805/93‑1 (MQ=255)
                          tAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATcagcag                                                               >  2:4567665/1‑93 (MQ=255)
                             ggTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTa                                                            <  1:1864581/93‑1 (MQ=255)
                              gTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTaa                                                           <  1:1983644/93‑1 (MQ=255)
                              gTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTaa                                                           >  2:416057/1‑93 (MQ=255)
                               ttGTCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAg                                                          <  2:1851124/93‑1 (MQ=255)
                               ttGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAg                                                          >  2:6063258/1‑93 (MQ=255)
                                tGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAgg                                                         >  2:9339925/1‑93 (MQ=255)
                                tGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAgg                                                         >  1:9261148/1‑93 (MQ=255)
                                 gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAggg                                                        >  1:1435359/1‑93 (MQ=255)
                                 gCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAggg                                                        >  1:8881085/1‑93 (MQ=255)
                                   cATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGa                                                      <  1:3656852/93‑1 (MQ=255)
                                    aTCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAg                                                     >  1:6698299/1‑93 (MQ=255)
                                     tCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGt                                                    >  1:2673048/1‑93 (MQ=255)
                                     tCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGAAAgggtggt                                                    >  1:2948485/1‑89 (MQ=255)
                                       aGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTa                                                  <  1:2337382/93‑1 (MQ=255)
                                        gCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGTGAGTTaa                                                 <  1:4169249/93‑1 (MQ=255)
                                          aaaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAata                                               <  1:2182628/93‑1 (MQ=255)
                                          aaaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAata                                               >  1:6018266/1‑93 (MQ=255)
                                           aaaCACCCAGACCGGTTGCGGAAGCGACGGCCAGAGGCATCAGACAGACGACAAAATAGGAGGCAATCATCAGCAGGCAAGGGGAGTTTatat                                              >  2:9174820/1‑93 (MQ=255)
                                           aaaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAatat                                              >  1:4889811/1‑93 (MQ=255)
                                            aaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  2:363500/93‑1 (MQ=255)
                                            aaCACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  2:5171288/93‑1 (MQ=255)
                                             acacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAc                                            >  2:8714138/1‑93 (MQ=255)
                                             acacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAc                                            <  1:7608158/93‑1 (MQ=255)
                                              cacCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACt                                           >  2:9679357/1‑93 (MQ=255)
                                               acCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTg                                          <  2:5646560/93‑1 (MQ=255)
                                                cccAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGc                                         <  1:5654460/93‑1 (MQ=255)
                                                    gACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATg                                     >  1:7809410/1‑93 (MQ=255)
                                                     aCCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATgg                                    <  2:6537234/93‑1 (MQ=255)
                                                      ccGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGt                                   <  2:1511593/93‑1 (MQ=255)
                                                      ccGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGt                                   <  2:126838/93‑1 (MQ=255)
                                                        ggTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGttt                                 <  2:4726038/93‑1 (MQ=255)
                                                         gTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGtttt                                >  1:9446754/1‑93 (MQ=255)
                                                          ttGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTg                               <  1:285464/93‑1 (MQ=255)
                                                           tGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGa                              <  1:1721489/93‑1 (MQ=255)
                                                           tGCGAAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGa                              <  2:6265906/93‑1 (MQ=255)
                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  2:5490412/1‑93 (MQ=255)
                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  1:6443697/1‑93 (MQ=255)
                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  2:6596853/1‑93 (MQ=255)
                                                               gAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGcc                          >  1:7242112/1‑93 (MQ=255)
                                                                aaGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCa                         <  2:2469433/93‑1 (MQ=255)
                                                                 agagACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAg                        >  1:10021078/1‑93 (MQ=255)
                                                                   agaCGGCCAGAGACATCAGACAGTCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCt                      <  2:6898780/93‑1 (MQ=255)
                                                                    gaCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCtt                     <  1:5216291/93‑1 (MQ=255)
                                                                    gaCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCtt                     >  2:798333/1‑93 (MQ=255)
                                                                     aCGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTg                    >  2:8429519/1‑93 (MQ=255)
                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 >  1:6885301/1‑93 (MQ=255)
                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 <  1:8144851/93‑1 (MQ=255)
                                                                        gCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGacc                 >  1:9005726/1‑93 (MQ=255)
                                                                           tttgaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAtata                                             <  1:856630/59‑1 (MQ=255)
                                                                           agagACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGaccacc              >  2:8452093/1‑93 (MQ=255)
                                                                           agagACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGaccacc              >  1:1639228/1‑93 (MQ=255)
                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             >  2:956664/1‑93 (MQ=255)
                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             <  2:2177850/93‑1 (MQ=255)
                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             >  2:2072359/1‑93 (MQ=255)
                                                                            gagaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAccacca             <  1:9590885/93‑1 (MQ=255)
                                                                             agaCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCat            <  2:3725920/93‑1 (MQ=255)
                                                                               aCATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCatat          >  1:8423790/1‑93 (MQ=255)
                                                                                cATCAGACAGACGACAAAATAGCCGGCAATCATCAGCAGGTAAGGGGCGTTAATATACTGCAATGGCTTTGACGCCAGCTTCACCACCATATc         >  1:6732353/1‑93 (MQ=255)
                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCa        >  2:7553006/1‑93 (MQ=255)
                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCa        <  2:1340338/93‑1 (MQ=255)
                                                                                 aTCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGAAATGGTTTTGACGCCAGCTTGACCACCATATCa        >  1:9681692/1‑93 (MQ=255)
                                                                                  tCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAt       >  2:7900326/1‑93 (MQ=255)
                                                                                  tCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAt       <  1:4598399/93‑1 (MQ=255)
                                                                                   cagacagaCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAtt      <  2:7426889/93‑1 (MQ=255)
                                                                                   cAGACATACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAtt      <  1:4240059/93‑1 (MQ=255)
                                                                                    agacagacGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTc     <  2:1099334/93‑1 (MQ=255)
                                                                                    agacagacGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTc     >  2:2765376/1‑93 (MQ=255)
                                                                                     gACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCCGCTTGACCACCATATCATTcg    >  1:5142589/1‑93 (MQ=255)
                                                                                      aCAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgc   <  2:3816254/93‑1 (MQ=255)
                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  1:3912736/93‑1 (MQ=255)
                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  2:7242111/93‑1 (MQ=255)
                                                                                       cAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTcgcg  <  2:6443696/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG  >  NC_000913/654722‑654901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCCGA  >  NC_000913/654719‑654905
                                                                                             |                                                                                             
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGTCATCAGACAGA                                                                                               >  SRR4302540.7897717/1‑94 (MQ=60)
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGA                                                                                               <  SRR4302540.3887554/94‑1 (MQ=60)
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGA                                                                                               >  SRR4302540.29907/1‑94 (MQ=60)
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGA                                                                                               >  SRR4302540.4269386/1‑94 (MQ=60)
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAAAACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGA                                                                                               >  SRR4302540.8581173/1‑94 (MQ=60)
CTGATACCAACGTTTACCATCACCGGAAATAGGGGTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGC                                                                                               >  SRR4302540.1167454/1‑94 (MQ=60)
 TGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGCGACGGCCAGAGACATCAGACAGAC                                                                                              >  SRR4302540.6411591/1‑94 (MQ=60)
 TGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGAC                                                                                              >  SRR4302540.4338113/1‑94 (MQ=60)
 TGATACCAACATTTTCCATCACCGGAAAGAGAGTTGCCATCAGCAAAACACCCAGACCGGCTGCGGAAGAGACGGCCAGAGACATCAGACAGAC                                                                                              <  SRR4302540.6817420/94‑1 (MQ=60)
  GATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCTGAGACATCAGACAGACG                                                                                             <  SRR4302540.9458991/94‑1 (MQ=60)
  GATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACG                                                                                             >  SRR4302540.5506696/1‑94 (MQ=60)
  GATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACG                                                                                             <  SRR4302540.2085365/94‑1 (MQ=60)
   ATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGA                                                                                            <  SRR4302540.4314717/94‑1 (MQ=60)
    TATCAACGTTTCCCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCAAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGAC                                                                                           <  SRR4302540.3661493/94‑1 (MQ=60)
     ACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACA                                                                                          <  SRR4302540.2931297/94‑1 (MQ=60)
      CCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAA                                                                                         >  SRR4302540.6401671/1‑94 (MQ=60)
      CCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAA                                                                                         >  SRR4302540.1087990/1‑94 (MQ=60)
       CAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAA                                                                                        >  SRR4302540.1355128/1‑94 (MQ=60)
       CAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAA                                                                                        <  SRR4302540.2439811/94‑1 (MQ=60)
       CAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAA                                                                                        >  SRR4302540.5855748/1‑94 (MQ=60)
        AACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAA                                                                                       <  SRR4302540.8026378/94‑1 (MQ=60)
         ACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAAT                                                                                      <  SRR4302540.2368955/94‑1 (MQ=60)
          CGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATA                                                                                     <  SRR4302540.9555192/94‑1 (MQ=60)
          CGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATA                                                                                     <  SRR4302540.2912379/94‑1 (MQ=60)
          CGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATA                                                                                     <  SRR4302540.5947686/94‑1 (MQ=60)
          CGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATA                                                                                     >  SRR4302540.2163421/1‑94 (MQ=60)
           GTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAG                                                                                    >  SRR4302540.5010233/1‑94 (MQ=60)
           GTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAG                                                                                    <  SRR4302540.1498655/94‑1 (MQ=60)
             TTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGC                                                                                  >  SRR4302540.9884357/1‑94 (MQ=60)
             TTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGC                                                                                  >  SRR4302540.7474114/1‑94 (MQ=60)
                CCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGC                                                                               >  SRR4302540.8306263/1‑94 (MQ=60)
                 CATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCA                                                                              <  SRR4302540.6223972/94‑1 (MQ=60)
                 CATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCA                                                                              <  SRR4302540.4549310/94‑1 (MQ=60)
                 CATCACCGGAAATAGGCTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCA                                                                              <  SRR4302540.9651411/94‑1 (MQ=60)
                  ATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAA                                                                             >  SRR4302540.2950759/1‑94 (MQ=60)
                  ATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAA                                                                             >  SRR4302540.643534/1‑94 (MQ=60)
                   TCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAAT                                                                            >  SRR4302540.6783153/1‑94 (MQ=60)
                   TCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGAAAGAAGACAAAATAGGCGGCAAT                                                                            >  SRR4302540.8751573/1‑94 (MQ=60)
                    CACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATC                                                                           >  SRR4302540.919505/1‑94 (MQ=60)
                    CACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATC                                                                           >  SRR4302540.919504/1‑94 (MQ=60)
                      CCGGGAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCAT                                                                         <  SRR4302540.3543931/94‑1 (MQ=60)
                       CGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATC                                                                        >  SRR4302540.1075637/1‑94 (MQ=60)
                       CGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATC                                                                        >  SRR4302540.1075639/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       >  SRR4302540.3265704/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       >  SRR4302540.7988410/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       >  SRR4302540.5779450/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       >  SRR4302540.6458609/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       >  SRR4302540.3265703/1‑94 (MQ=60)
                        GGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       <  SRR4302540.8009941/94‑1 (MQ=60)
                        CGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCA                                                                       <  SRR4302540.755248/94‑1 (MQ=60)
                          AAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGC                                                                     >  SRR4302540.4283398/1‑94 (MQ=60)
                          AAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGC                                                                     >  SRR4302540.7163334/1‑94 (MQ=60)
                          AAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGC                                                                     >  SRR4302540.1306750/1‑94 (MQ=60)
                           AATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCA                                                                    <  SRR4302540.9768701/94‑1 (MQ=60)
                           AATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCA                                                                    <  SRR4302540.8111210/94‑1 (MQ=60)
                           AATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCA                                                                    >  SRR4302540.8301395/1‑94 (MQ=60)
                           AATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATAAGACAGGCGACAAAATAGGCGGCAATCATCAGCA                                                                    >  SRR4302540.2544273/1‑94 (MQ=60)
                            ATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAG                                                                   >  SRR4302540.2069616/1‑94 (MQ=60)
                            ATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAG                                                                   <  SRR4302540.4614388/94‑1 (MQ=60)
                             TAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGG                                                                  <  SRR4302540.3056072/94‑1 (MQ=60)
                             TAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGG                                                                  <  SRR4302540.694415/94‑1 (MQ=60)
                              AGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGT                                                                 >  SRR4302540.9588636/1‑94 (MQ=60)
                                GGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGCCAAAATAGGCGGCAATCATCAGCAGGTAA                                                               >  SRR4302540.2195019/1‑94 (MQ=60)
                                GGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAA                                                               >  SRR4302540.2195018/1‑94 (MQ=60)
                                GGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAA                                                               <  SRR4302540.1885020/94‑1 (MQ=60)
                                 GTTGCCATCAGCAAAACACCCCGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGAGCAAATAGGAGGCAATCATCAGCAGGTAAG                                                              >  SRR4302540.1602927/1‑94 (MQ=60)
                                 GTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAG                                                              <  SRR4302540.2005147/94‑1 (MQ=60)
                                  TTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGG                                                             >  SRR4302540.9371936/1‑94 (MQ=60)
                                  TTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGG                                                             >  SRR4302540.5414741/1‑94 (MQ=60)
                                  TTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGG                                                             <  SRR4302540.5215342/94‑1 (MQ=60)
                                   TGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGG                                                            >  SRR4302540.8983867/1‑94 (MQ=60)
                                   TGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGG                                                            >  SRR4302540.1450921/1‑94 (MQ=60)
                                    GCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGG                                                           <  SRR4302540.1255978/94‑1 (MQ=60)
                                    GCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGG                                                           >  SRR4302540.1680418/1‑94 (MQ=60)
                                    GCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGG                                                           <  SRR4302540.9487242/94‑1 (MQ=60)
                                     CCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGA                                                          >  SRR4302540.3577882/1‑94 (MQ=60)
                                     CCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGA                                                          >  SRR4302540.3427441/1‑94 (MQ=60)
                                      CATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAG                                                         <  SRR4302540.2736907/94‑1 (MQ=60)
                                      CATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAG                                                         >  SRR4302540.6772239/1‑94 (MQ=60)
                                      CATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAG                                                         <  SRR4302540.3696898/94‑1 (MQ=60)
                                       ATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCCATCATCAGCAGGTCAGGGGCGT                                                        >  SRR4302540.5105985/1‑94 (MQ=60)
                                       ATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGT                                                        >  SRR4302540.4751993/1‑94 (MQ=60)
                                       ATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGT                                                        <  SRR4302540.2055309/94‑1 (MQ=60)
                                       ATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGT                                                        >  SRR4302540.2701992/1‑94 (MQ=60)
                                       ATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGAAAGGGtggt                                                        >  SRR4302540.2980930/1‑90 (MQ=60)
                                         CAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTA                                                      >  SRR4302540.7916097/1‑94 (MQ=60)
                                          AGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAA                                                     >  SRR4302540.7222249/1‑94 (MQ=60)
                                          AGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAA                                                     <  SRR4302540.2362570/94‑1 (MQ=60)
                                          AGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAA                                                     <  SRR4302540.10012358/94‑1 (MQ=60)
                                           GCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCCGGGAAGGGGAGGTAAT                                                    >  SRR4302540.971548/1‑94 (MQ=60)
                                           GCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGTGAGTTAAT                                                    <  SRR4302540.4214468/94‑1 (MQ=60)
                                           GCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAAT                                                    <  SRR4302540.4340881/94‑1 (MQ=60)
                                            CAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATA                                                   >  SRR4302540.6085016/1‑94 (MQ=60)
                                             AAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATAT                                                  >  SRR4302540.4942383/1‑94 (MQ=60)
                                             AAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATAT                                                  <  SRR4302540.2206182/94‑1 (MQ=60)
                                             AAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATAT                                                  >  SRR4302540.6758096/1‑94 (MQ=60)
                                             AAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATAT                                                  >  SRR4302540.2322394/1‑94 (MQ=60)
                                               ctgctgaaccgctcttccgatctagcgcttttttGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAC                                                <  SRR4302540.865728/60‑1 (MQ=60)
                                               AACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATAC                                                >  SRR4302540.1181700/1‑94 (MQ=60)
                                                ACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACT                                               <  SRR4302540.7693653/94‑1 (MQ=60)
                                                 CACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTG                                              <  SRR4302540.1987466/94‑1 (MQ=60)
                                                  ACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATGGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGC                                             <  SRR4302540.6424514/94‑1 (MQ=60)
                                                  ACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGC                                             <  SRR4302540.2635497/94‑1 (MQ=60)
                                                  ACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGC                                             <  SRR4302540.8589409/94‑1 (MQ=60)
                                                  ACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGC                                             <  SRR4302540.4465815/94‑1 (MQ=60)
                                                   CCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCA                                            <  SRR4302540.1536907/94‑1 (MQ=60)
                                                   CCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCA                                            <  SRR4302540.5716713/94‑1 (MQ=60)
                                                   CCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCA                                            <  SRR4302540.3144099/94‑1 (MQ=60)
                                                   CCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCA                                            >  SRR4302540.6929772/1‑94 (MQ=60)
                                                     CAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAAT                                          >  SRR4302540.2434080/1‑94 (MQ=60)
                                                      AGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATG                                         >  SRR4302540.5268658/1‑94 (MQ=60)
                                                      AGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATG                                         >  SRR4302540.3987839/1‑94 (MQ=60)
                                                      AGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATG                                         >  SRR4302540.7900667/1‑94 (MQ=60)
                                                       GACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGG                                        <  SRR4302540.168287/94‑1 (MQ=60)
                                                         CCGGTTGCGGAAGAGACGTCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTT                                      <  SRR4302540.7049489/94‑1 (MQ=60)
                                                         CCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGGAAGGGGAGTTAATATACTGCAATGGTT                                      >  SRR4302540.8018509/1‑94 (MQ=60)
                                                          CGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTT                                     >  SRR4302540.741999/1‑94 (MQ=60)
                                                           GGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTT                                    >  SRR4302540.9558897/1‑94 (MQ=60)
                                                           GGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTT                                    <  SRR4302540.1402908/94‑1 (MQ=60)
                                                           GGTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTT                                    <  SRR4302540.4220010/94‑1 (MQ=60)
                                                           GGTTGCGGAAGAGACGACCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTT                                    <  SRR4302540.8905346/94‑1 (MQ=60)
                                                            GTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTG                                   <  SRR4302540.7794964/94‑1 (MQ=60)
                                                            GTTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTG                                   >  SRR4302540.2727390/1‑94 (MQ=60)
                                                            GTGGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCAGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTG                                   <  SRR4302540.7794965/94‑1 (MQ=60)
                                                             TTGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGA                                  <  SRR4302540.288276/94‑1 (MQ=60)
                                                             TCGCGGAAGAGATGGCCAGAGACATCAGACAGACGACAAAAGACGATGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGA                                  <  SRR4302540.5799850/94‑1 (MQ=60)
                                                              TGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGAC                                 <  SRR4302540.1740069/94‑1 (MQ=60)
                                                              TGCGGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGAC                                 <  SRR4302540.4822192/94‑1 (MQ=60)
                                                                 GGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCC                              >  SRR4302540.6515423/1‑94 (MQ=60)
                                                                 GGAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCC                              >  SRR4302540.7322895/1‑94 (MQ=60)
                                                                  GAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCA                             <  SRR4302540.2254670/94‑1 (MQ=60)
                                                                  GAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCA                             <  SRR4302540.2254669/94‑1 (MQ=60)
                                                                  GAAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCA                             <  SRR4302540.3759069/94‑1 (MQ=60)
                                                                   AAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAG                            <  SRR4302540.9544285/94‑1 (MQ=60)
                                                                   AAGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAG                            >  SRR4302540.10137700/1‑94 (MQ=60)
                                                                    AGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGC                           <  SRR4302540.3812330/94‑1 (MQ=60)
                                                                    AGAGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGC                           >  SRR4302540.279077/1‑94 (MQ=60)
                                                                      AGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTT                         <  SRR4302540.8522406/94‑1 (MQ=60)
                                                                      AGACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTT                         >  SRR4302540.3743155/1‑94 (MQ=60)
                                                                       GACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTG                        >  SRR4302540.9084439/1‑94 (MQ=60)
                                                                       GACGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTG                        <  SRR4302540.5273147/94‑1 (MQ=60)
                                                                         CGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC                      >  SRR4302540.9828712/1‑94 (MQ=60)
                                                                         CGGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGAC                      <  SRR4302540.6465044/94‑1 (MQ=60)
                                                                          GGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACC                     >  SRR4302540.9113766/1‑94 (MQ=60)
                                                                          GGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACC                     >  SRR4302540.6961632/1‑94 (MQ=60)
                                                                          GGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACC                     >  SRR4302540.9113760/1‑94 (MQ=60)
                                                                          GGCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGCTAATATACTGCAATGGTTTTGACGCCAGCTTGACC                     >  SRR4302540.6436329/1‑94 (MQ=60)
                                                                           GCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCA                    >  SRR4302540.2960078/1‑94 (MQ=60)
                                                                           GCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCA                    <  SRR4302540.8239399/94‑1 (MQ=60)
                                                                           GCCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGAAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCC                    >  SRR4302540.2960077/1‑94 (MQ=60)
                                                                            CCAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCAC                   >  SRR4302540.1943632/1‑94 (MQ=60)
                                                                             CAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACC                  >  SRR4302540.1657148/1‑94 (MQ=60)
                                                                             CAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACC                  >  SRR4302540.1765806/1‑94 (MQ=60)
                                                                             CAGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACC                  >  SRR4302540.1765805/1‑94 (MQ=60)
                                                                              AGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCA                 >  SRR4302540.1893547/1‑94 (MQ=60)
                                                                              AGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCA                 >  SRR4302540.5112032/1‑94 (MQ=60)
                                                                              AGAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCA                 >  SRR4302540.8672809/1‑94 (MQ=60)
                                                                               GAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCAT                <  SRR4302540.4573562/94‑1 (MQ=60)
                                                                               GAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCAT                >  SRR4302540.6929114/1‑94 (MQ=60)
                                                                               GAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCAT                <  SRR4302540.9704081/94‑1 (MQ=60)
                                                                               GAGACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCAT                <  SRR4302540.6507576/94‑1 (MQ=60)
                                                                                 GACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATAT              >  SRR4302540.8521566/1‑94 (MQ=60)
                                                                                  ACATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATC             <  SRR4302540.3586023/94‑1 (MQ=60)
                                                                                  ACATCAGACAGACGACAAAATAGCCGGCAATCATCAGCAGGTAAGGGGCGTTAATATACTGCAATGGCTTTGACGCCAGCTTCACCACCATATC             >  SRR4302540.6806699/1‑94 (MQ=60)
                                                                                   CATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGAAATGGTTTTGACGCCAGCTTGACCACCATATCA            >  SRR4302540.9795602/1‑94 (MQ=60)
                                                                                    ATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAT           <  SRR4302540.4200695/94‑1 (MQ=60)
                                                                                    ATCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCAT           >  SRR4302540.7207733/1‑94 (MQ=60)
                                                                                     TCAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATT          <  SRR4302540.4647836/94‑1 (MQ=60)
                                                                                      CAGACATACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTC         <  SRR4302540.4286189/94‑1 (MQ=60)
                                                                                      CAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTC         <  SRR4302540.3400581/94‑1 (MQ=60)
                                                                                      CAGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTC         >  SRR4302540.6970880/1‑94 (MQ=60)
                                                                                       AGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCCGCTTGACCACCATATCATTCG        >  SRR4302540.5198285/1‑94 (MQ=60)
                                                                                       AGACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCG        <  SRR4302540.6367415/94‑1 (MQ=60)
                                                                                        GACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGC       >  SRR4302540.6796624/1‑94 (MQ=60)
                                                                                         ACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG      <  SRR4302540.1636654/94‑1 (MQ=60)
                                                                                         ACAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCG      >  SRR4302540.6754267/1‑94 (MQ=60)
                                                                                          CAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGC     <  SRR4302540.3955124/94‑1 (MQ=60)
                                                                                          CAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGC     >  SRR4302540.7340474/1‑94 (MQ=60)
                                                                                          CAGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGC     >  SRR4302540.4793160/1‑94 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGCGTTAATATACTGCAATGGTTTTGACGCCAGCTTCACCACCATATCATTCGCGCC    >  SRR4302540.9895772/1‑94 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    >  SRR4302540.9619658/1‑94 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    >  SRR4302540.5482265/1‑94 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    <  SRR4302540.4327955/94‑1 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    <  SRR4302540.2903752/94‑1 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    >  SRR4302540.8971325/1‑94 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    <  SRR4302540.9109642/94‑1 (MQ=60)
                                                                                           AGACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGGTTTGACGCCAGCTTGACCACCATATCATTCGCGCC    >  SRR4302540.7780001/1‑94 (MQ=60)
                                                                                             ACGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCCGA  >  SRR4302540.3427009/1‑94 (MQ=60)
                                                                                             |                                                                                             
CTGATACCAACGTTTACCATCACCGGAAATAGGGTTGCCATCAGCAAAACACCCAGACCGGTTGCGGAAGAGACGGCCAGAGACATCAGACAGGCGACAAAATAGGCGGCAATCATCAGCAGGTAAGGGGAGTTAATATACTGCAATGGTTTTGACGCCAGCTTGACCACCATATCATTCGCGCCGA  >  NC_000913/654719‑654905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑