Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	675,063	A→G	A236A (GCT→GCC)	ybeQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	675,063	0	A	G	99.7%	965.8 / ‑5.0	303	A236A (GCT→GCC)	ybeQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (169/132); total (170/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01

Only 100 of 318 total aligned reads displayed.

CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG  >  NC_000913/674973‑675152

ccATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGc                                                                                         <  1:2045061/93‑1 (MQ=255)

   ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc                                                                                      >  1:3592464/1‑93 (MQ=255)

   ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc                                                                                      <  2:8687064/93‑1 (MQ=255)

    tCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCa                                                                                     >  1:951167/1‑93 (MQ=255)

     cAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAg                                                                                    >  2:5065805/1‑93 (MQ=255)

      aaaGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGc                                                                                   >  1:296446/1‑93 (MQ=255)

       aaGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGcc                                                                                  <  2:4808088/93‑1 (MQ=255)

           cAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCa                                                                              <  2:6210729/93‑1 (MQ=255)

           cAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCa                                                                              <  2:503278/93‑1 (MQ=255)

            aGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAg                                                                             >  1:1722120/1‑93 (MQ=255)

            aGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAg                                                                             <  1:6028876/93‑1 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            >  2:9934570/1‑93 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            <  1:534721/93‑1 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            <  2:5792284/93‑1 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            >  1:464451/1‑93 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            <  1:381577/93‑1 (MQ=255)

             gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATAAATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa                                                                            >  2:4604960/1‑93 (MQ=255)

              ccTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAt                                                                           <  2:3718485/93‑1 (MQ=255)

                tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc                                                                         >  2:8810644/1‑93 (MQ=255)

                tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc                                                                         >  1:3997802/1‑93 (MQ=255)

                tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc                                                                         >  2:9142942/1‑93 (MQ=255)

                tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc                                                                         >  1:5322293/1‑93 (MQ=255)

                 gATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAcc                                                                        <  1:4340218/93‑1 (MQ=255)

                   tAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAg                                                                      >  1:6952970/1‑93 (MQ=255)

                   tAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAg                                                                      >  2:2133323/1‑93 (MQ=255)

                    aaTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAga                                                                     >  1:1004700/1‑92 (MQ=255)

                    aaTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGt                                                                     >  2:5387524/1‑93 (MQ=255)

                     aTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTa                                                                    >  1:9182850/1‑93 (MQ=255)

                      tCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCTCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTAc                                                                   >  2:181806/1‑93 (MQ=255)

                      tCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCGGCCTTCAGATACCAGTAc                                                                   >  1:4238611/1‑93 (MQ=255)

                       cTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACa                                                                  >  2:1982153/1‑93 (MQ=255)

                        tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt                                                                 >  1:4785381/1‑93 (MQ=255)

                        tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt                                                                 <  2:1113991/93‑1 (MQ=255)

                        tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt                                                                 <  1:3418936/93‑1 (MQ=255)

                         ttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGAGGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATc                                                                >  1:4448816/1‑93 (MQ=255)

                         ttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATc                                                                <  1:4893105/93‑1 (MQ=255)

                           ctcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgc                                                              <  2:7142040/93‑1 (MQ=255)

                            tcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGTCTTCAGATACCAGTACATCgct                                                             >  2:2369146/1‑93 (MQ=255)

                            tcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgct                                                             >  2:3053948/1‑93 (MQ=255)

                            tcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCCTCAGATACCAGTACATCgct                                                             >  2:3481859/1‑93 (MQ=255)

                              aaCGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgcttg                                                           >  1:9935677/1‑93 (MQ=255)

                               aCGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgcttgc                                                          >  2:9596141/1‑93 (MQ=255)

                                  ccTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTta                                                       <  1:9280673/93‑1 (MQ=255)

                                    ttGTCCGTGTTTATACATATAACCGATGTTGACGTACGCGCCGACGCTAACCTGGGCGGGAGCCTTCCGATACCAGTACATCGGTTGCTtatc                                                     >  2:7949919/1‑92 (MQ=255)

                                    ttGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtata                                                     >  2:8158602/1‑93 (MQ=255)

                                    ttGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtata                                                     >  2:4482877/1‑93 (MQ=255)

                                    ttGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtata                                                     >  2:5567187/1‑93 (MQ=255)

                                      gTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGt                                                   <  2:329279/93‑1 (MQ=255)

                                       tCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTc                                                  >  1:7513798/1‑93 (MQ=255)

                                         cGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCt                                                <  1:3012870/93‑1 (MQ=255)

                                         cGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCt                                                <  1:9348636/93‑1 (MQ=255)

                                           tgtTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTgg                                              <  2:7489403/93‑1 (MQ=255)

                                             tttATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTc                                            >  1:1298824/1‑93 (MQ=255)

                                              ttATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTcc                                           >  2:7266235/1‑93 (MQ=255)

                                              ttATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTcc                                           <  1:2339111/93‑1 (MQ=255)

                                                ataCATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAc                                         >  2:1029811/1‑93 (MQ=255)

                                                ataCATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAc                                         >  1:6524371/1‑93 (MQ=255)

                                                ataCATATAACAGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAc                                         <  2:9399134/93‑1 (MQ=255)

                                                  aCATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAccc                                       >  1:5655968/1‑93 (MQ=255)

                                                    atatAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCt                                     <  1:1430556/93‑1 (MQ=255)

                                                    atatAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCt                                     <  1:5486172/93‑1 (MQ=255)

                                                    atatAACCGATGTTGACATAAGCGCCGACGCTCCCCTGGGCGGCAACCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCt                                     <  1:8979920/93‑1 (MQ=255)

                                                        aaCCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGc                                 >  1:6794056/1‑93 (MQ=255)

                                                          ccGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCa                               <  2:1581152/93‑1 (MQ=255)

                                                          ccGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCa                               <  2:2700291/93‑1 (MQ=255)

                                                           cGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAg                              >  2:6044185/1‑93 (MQ=255)

                                                            gATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGc                             >  2:6875369/1‑93 (MQ=255)

                                                             aTGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCg                            >  1:8699054/1‑93 (MQ=255)

                                                              tGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGt                           >  1:9081736/1‑93 (MQ=255)

                                                               gTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGtt                          >  2:7643202/1‑93 (MQ=255)

                                                                ttGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTta                         >  1:8017034/1‑93 (MQ=255)

                                                                 tGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTtat                        <  1:7909430/93‑1 (MQ=255)

                                                                  gACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTtata                       <  1:7725846/93‑1 (MQ=255)

                                                                   aCGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATaa                      <  1:6326444/93‑1 (MQ=255)

                                                                      tAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATcc                   >  1:2073111/1‑93 (MQ=255)

                                                                      tAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATcc                   >  1:8330557/1‑93 (MQ=255)

                                                                      tAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATcc                   >  2:2490359/1‑93 (MQ=255)

                                                                       aaGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATccc                  >  1:2635967/1‑93 (MQ=255)

                                                                       aaGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATccc                  <  1:5241587/93‑1 (MQ=255)

                                                                        aGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCa                 <  2:9232632/93‑1 (MQ=255)

                                                                        aGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCa                 <  2:8270751/93‑1 (MQ=255)

                                                                        aGCGACGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCa                 >  2:6490754/1‑93 (MQ=255)

                                                                         gcgcCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAt                <  1:310320/93‑1 (MQ=255)

                                                                          cgcCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATg               >  1:22415/1‑93 (MQ=255)

                                                                           gcCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGc              <  2:3989460/93‑1 (MQ=255)

                                                                            ccGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCa             >  2:222046/1‑93 (MQ=255)

                                                                            ccGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCa             >  1:7180744/1‑93 (MQ=255)

                                                                              gACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAAt           >  1:7068467/1‑93 (MQ=255)

                                                                                cGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAAttt         <  2:1683920/93‑1 (MQ=255)

                                                                                  cTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGa       >  1:4072658/1‑93 (MQ=255)

                                                                                  cTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGa       >  1:2835593/1‑93 (MQ=255)

                                                                                  cTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGa       >  1:499704/1‑93 (MQ=255)

                                                                                    ccccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGaaa     <  2:928168/93‑1 (MQ=255)

                                                                                    ccccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGaaa     >  1:8526697/1‑93 (MQ=255)

                                                                                     cccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAAc    <  1:7340351/93‑1 (MQ=255)

                                                                                       cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg  >  1:2451700/1‑93 (MQ=255)

                                                                                       cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg  <  1:5889373/93‑1 (MQ=255)

                                                                                       cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg  >  1:5803936/1‑93 (MQ=255)

                                                                                       cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg  >  1:1887019/1‑93 (MQ=255)

                                                                                       cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg  >  1:1031707/1‑93 (MQ=255)

CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG  >  NC_000913/674973‑675152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGCG  >  NC_000913/674970‑675156

AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG                                                                                               >  SRR4302540.7386246/1‑94 (MQ=60)

AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG                                                                                               <  SRR4302540.7308132/94‑1 (MQ=60)

AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG                                                                                               <  SRR4302540.7164937/94‑1 (MQ=60)

  ACCATTCAAAGGCAGCCTGATAATCTTTCTCAAAGCCTTGTCCGTGTTTGTACATATAACCGATGTTGACGCAAGCGCCGACGCTCCCCTGGGC                                                                                             >  SRR4302540.2945441/1‑94 (MQ=60)

   CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCG                                                                                            <  SRR4302540.9230520/94‑1 (MQ=60)

   CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCG                                                                                            >  SRR4302540.4041019/1‑94 (MQ=60)

   CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCG                                                                                            <  SRR4302540.2067091/94‑1 (MQ=60)

   CCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGAGCCGACGCTCCCCTGGGCG                                                                                            >  SRR4302540.4041017/1‑94 (MQ=60)

     ATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGC                                                                                          >  SRR4302540.3015593/1‑94 (MQ=60)

     ATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGC                                                                                          >  SRR4302540.3631710/1‑94 (MQ=60)

     ATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGC                                                                                          >  SRR4302540.8000306/1‑94 (MQ=60)

      TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGCCGTAAGCGCCGACGCTCCCCTGGGCGGCA                                                                                         <  SRR4302540.7476783/94‑1 (MQ=60)

      TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCA                                                                                         >  SRR4302540.9439968/1‑94 (MQ=60)

      TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCA                                                                                         >  SRR4302540.961050/1‑94 (MQ=60)

      TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCA                                                                                         <  SRR4302540.9817026/94‑1 (MQ=60)

       TCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAG                                                                                        >  SRR4302540.1036581/1‑94 (MQ=60)

        CAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGC                                                                                       >  SRR4302540.299380/1‑94 (MQ=60)

        CAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGC                                                                                       >  SRR4302540.2240776/1‑94 (MQ=60)

         AAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCC                                                                                      >  SRR4302540.4131548/1‑94 (MQ=60)

          AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCT                                                                                     <  SRR4302540.8830266/94‑1 (MQ=60)

          AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCT                                                                                     >  SRR4302540.6162736/1‑94 (MQ=60)

          AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGCAAGCGCCGACGCTCCCCTGGGCGGCAGCCT                                                                                     <  SRR4302540.2082449/94‑1 (MQ=60)

           AGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTT                                                                                    >  SRR4302540.7406662/1‑94 (MQ=60)

             GCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGCCGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA                                                                                  <  SRR4302540.1828522/94‑1 (MQ=60)

             GCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA                                                                                  <  SRR4302540.4747123/94‑1 (MQ=60)

              CAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAG                                                                                 >  SRR4302540.1740703/1‑94 (MQ=60)

              CAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAG                                                                                 <  SRR4302540.1805650/94‑1 (MQ=60)

               AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA                                                                                <  SRR4302540.6095772/94‑1 (MQ=60)

               AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA                                                                                <  SRR4302540.6095774/94‑1 (MQ=60)

               AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA                                                                                >  SRR4302540.469408/1‑94 (MQ=60)

               AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA                                                                                <  SRR4302540.3706043/94‑1 (MQ=60)

                GCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAT                                                                               <  SRR4302540.540509/94‑1 (MQ=60)

                GCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAT                                                                               <  SRR4302540.385520/94‑1 (MQ=60)

                GCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAT                                                                               <  SRR4302540.540510/94‑1 (MQ=60)

                  CTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAC                                                                             <  SRR4302540.397356/94‑1 (MQ=60)

                  CTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAC                                                                             >  SRR4302540.4040830/1‑94 (MQ=60)

                  CTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAC                                                                             >  SRR4302540.5380573/1‑94 (MQ=60)

                  CTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAC                                                                             >  SRR4302540.7008289/1‑94 (MQ=60)

                    GATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCA                                                                           <  SRR4302540.4387467/94‑1 (MQ=60)

                    GATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCA                                                                           <  SRR4302540.8037613/94‑1 (MQ=60)

                     ATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAG                                                                          >  SRR4302540.4921971/1‑94 (MQ=60)

                     ATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAG                                                                          >  SRR4302540.7030327/1‑94 (MQ=60)

                     ATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAG                                                                          <  SRR4302540.7195012/94‑1 (MQ=60)

                      TAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGT                                                                         <  SRR4302540.3583245/94‑1 (MQ=60)

                      TAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGT                                                                         <  SRR4302540.8418436/94‑1 (MQ=60)

                      TAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGA                                                                         >  SRR4302540.1014893/1‑94 (MQ=60)

                       AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATACCCGATGTTGACGTAAGCGCCGACGCCCCCCTGCGCGGCAGCCTTCAGATACCAGTA                                                                        <  SRR4302540.5031179/94‑1 (MQ=60)

                       AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTA                                                                        >  SRR4302540.9292979/1‑94 (MQ=60)

                        ATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCGGCCTTCAGATACCAGTAC                                                                       >  SRR4302540.4284731/1‑94 (MQ=60)

                          CTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAT                                                                     >  SRR4302540.4836542/1‑94 (MQ=60)

                          CTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAT                                                                     >  SRR4302540.2396034/1‑94 (MQ=60)

                          CTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAT                                                                     >  SRR4302540.5477666/1‑94 (MQ=60)

                           TTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGAGGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATC                                                                    >  SRR4302540.4497032/1‑94 (MQ=60)

                           TTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATC                                                                    <  SRR4302540.3456134/94‑1 (MQ=60)

                           TTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATC                                                                    >  SRR4302540.4497030/1‑94 (MQ=60)

                            TTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCG                                                                   <  SRR4302540.4945722/94‑1 (MQ=60)

                            TTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCG                                                                   >  SRR4302540.2711402/1‑94 (MQ=60)

                              CTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCT                                                                 >  SRR4302540.4858462/1‑94 (MQ=60)

                              CTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCT                                                                 <  SRR4302540.5979333/94‑1 (MQ=60)

                               TCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTT                                                                >  SRR4302540.4353025/1‑94 (MQ=60)

                               TCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTT                                                                >  SRR4302540.8034004/1‑94 (MQ=60)

                                CAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTG                                                               >  SRR4302540.10051626/1‑94 (MQ=60)

                                CAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTG                                                               >  SRR4302540.3232409/1‑94 (MQ=60)

                                CAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTG                                                               <  SRR4302540.6745513/94‑1 (MQ=60)

                                 AACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGC                                                              >  SRR4302540.3024141/1‑94 (MQ=60)

                                  ACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCT                                                             >  SRR4302540.1428080/1‑94 (MQ=60)

                                  ACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCT                                                             <  SRR4302540.8516005/94‑1 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          <  SRR4302540.9391603/94‑1 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          >  SRR4302540.4958803/1‑94 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          >  SRR4302540.4328003/1‑94 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          >  SRR4302540.8167939/1‑94 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          <  SRR4302540.2108384/94‑1 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          <  SRR4302540.5877000/94‑1 (MQ=60)

                                     CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT                                                          >  SRR4302540.7533249/1‑94 (MQ=60)

                                      CTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATA                                                         >  SRR4302540.8522304/1‑94 (MQ=60)

                                      CTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATA                                                         <  SRR4302540.2052718/94‑1 (MQ=60)

                                      CTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATA                                                         >  SRR4302540.4657972/1‑94 (MQ=60)

                                       TTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAG                                                        >  SRR4302540.6967312/1‑94 (MQ=60)

                                        TGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGT                                                       <  SRR4302540.6434091/94‑1 (MQ=60)

                                        TGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGT                                                       <  SRR4302540.1945309/94‑1 (MQ=60)

                                         GTCCTTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTC                                                      <  SRR4302540.2964676/94‑1 (MQ=60)

                                         GTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATCCCAGTACATCGCTCGCTTATAGTC                                                      >  SRR4302540.5369208/1‑94 (MQ=60)

                                         GTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTC                                                      >  SRR4302540.7597799/1‑94 (MQ=60)

                                          TCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGCCGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCT                                                     >  SRR4302540.5205458/1‑94 (MQ=60)

                                          TCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCT                                                     >  SRR4302540.3304679/1‑94 (MQ=60)

                                          TCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCC                                                     >  SRR4302540.5205459/1‑94 (MQ=60)

                                           CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT                                                    >  SRR4302540.5802152/1‑94 (MQ=60)

                                           CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT                                                    <  SRR4302540.9898566/94‑1 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   >  SRR4302540.5139980/1‑94 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   >  SRR4302540.612379/1‑94 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   <  SRR4302540.7781029/94‑1 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   <  SRR4302540.3046005/94‑1 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   >  SRR4302540.7130573/1‑94 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   <  SRR4302540.9459992/94‑1 (MQ=60)

                                            CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG                                                   <  SRR4302540.9459991/94‑1 (MQ=60)

                                             GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG                                                  >  SRR4302540.7095178/1‑94 (MQ=60)

                                               GTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTC                                                >  SRR4302540.3053096/1‑94 (MQ=60)

                                               GTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTC                                                >  SRR4302540.5792525/1‑94 (MQ=60)

                                               GTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTC                                                >  SRR4302540.1312290/1‑94 (MQ=60)

                                                 TTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCA                                              >  SRR4302540.2076533/1‑94 (MQ=60)

                                                 TTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCA                                              <  SRR4302540.2364317/94‑1 (MQ=60)

                                                  TATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAC                                             >  SRR4302540.6596831/1‑94 (MQ=60)

                                                   ATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACC                                            >  SRR4302540.1491601/1‑94 (MQ=60)

                                                    TACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCC                                           >  SRR4302540.5718247/1‑94 (MQ=60)

                                                     ACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCC                                          <  SRR4302540.2691377/94‑1 (MQ=60)

                                                     ACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCC                                          <  SRR4302540.6907919/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.8844147/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.5546563/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.1446051/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.4448725/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.5881936/94‑1 (MQ=60)

                                                       ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCAGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        >  SRR4302540.7320536/1‑94 (MQ=60)

                                                       ATATAACCGATGTTGACATAAGCGCCGACGCTCCCCTGGGCGGCAACCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT                                        <  SRR4302540.9086924/94‑1 (MQ=60)

                                                        TATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTC                                       >  SRR4302540.781212/1‑94 (MQ=60)

                                                        TATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTC                                       <  SRR4302540.3537164/94‑1 (MQ=60)

                                                         ATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCG                                      >  SRR4302540.1310871/1‑94 (MQ=60)

                                                         ATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCG                                      >  SRR4302540.9144699/1‑94 (MQ=60)

                                                          TAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGC                                     >  SRR4302540.9279081/1‑94 (MQ=60)

                                                          TAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGC                                     >  SRR4302540.6869193/1‑94 (MQ=60)

                                                             CCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAG                                  <  SRR4302540.5326831/94‑1 (MQ=60)

                                                              CGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGC                                 <  SRR4302540.9697563/94‑1 (MQ=60)

                                                              CGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGC                                 >  SRR4302540.3877377/1‑94 (MQ=60)

                                                               GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG                                >  SRR4302540.1585524/1‑94 (MQ=60)

                                                               GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG                                >  SRR4302540.8800035/1‑94 (MQ=60)

                                                                ATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGT                               >  SRR4302540.9190841/1‑94 (MQ=60)

                                                                ATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGT                               >  SRR4302540.1180327/1‑94 (MQ=60)

                                                                  GTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTA                             >  SRR4302540.8110279/1‑94 (MQ=60)

                                                                  GTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTA                             <  SRR4302540.2338580/94‑1 (MQ=60)

                                                                    TGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATA                           <  SRR4302540.2645509/94‑1 (MQ=60)

                                                                    TGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATA                           <  SRR4302540.8001654/94‑1 (MQ=60)

                                                                     GACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAA                          <  SRR4302540.7816028/94‑1 (MQ=60)

                                                                     GACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAA                          <  SRR4302540.7816030/94‑1 (MQ=60)

                                                                      ACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAT                         <  SRR4302540.6396899/94‑1 (MQ=60)

                                                                      ACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAT                         >  SRR4302540.2777203/1‑94 (MQ=60)

                                                                      ACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAT                         <  SRR4302540.6396898/94‑1 (MQ=60)

                                                                      ACGTAAGCGACGACGCTCCCCTGGGCGGCAGCGTTCAGATGCCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAT                         <  SRR4302540.4752044/94‑1 (MQ=60)

                                                                        GTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCC                       >  SRR4302540.2095403/1‑94 (MQ=60)

                                                                        GTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCC                       >  SRR4302540.2458806/1‑94 (MQ=60)

                                                                        GTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCC                       >  SRR4302540.367837/1‑94 (MQ=60)

                                                                        GTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCC                       >  SRR4302540.8427251/1‑94 (MQ=60)

                                                                         TAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCC                      <  SRR4302540.6696476/94‑1 (MQ=60)

                                                                         TAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCC                      >  SRR4302540.2664505/1‑94 (MQ=60)

                                                                          AAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCA                     >  SRR4302540.5558579/1‑94 (MQ=60)

                                                                          AAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCA                     <  SRR4302540.5298760/94‑1 (MQ=60)

                                                                          AAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCA                     >  SRR4302540.5681952/1‑94 (MQ=60)

                                                                           AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT                    <  SRR4302540.248285/94‑1 (MQ=60)

                                                                           AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT                    <  SRR4302540.9128986/94‑1 (MQ=60)

                                                                           AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT                    <  SRR4302540.9367190/94‑1 (MQ=60)

                                                                           AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT                    <  SRR4302540.8757269/94‑1 (MQ=60)

                                                                            GCTCCGACGCTACCCTGGCCGGCACCCTTCAGATACGAGTACATCGGTTGCTTATAGTCCTGGCCCACCCCTTCGCCAGCGTTATAATCCCATG                   <  SRR4302540.6080796/94‑1 (MQ=60)

                                                                            GCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCTTGGTCCACCCCTcgcccgccgttttattcccttc                   >  SRR4302540.9637849/1‑72 (MQ=60)

                                                                            GCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATG                   >  SRR4302540.22666/1‑94 (MQ=60)

                                                                            GCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATG                   <  SRR4302540.313397/94‑1 (MQ=60)

                                                                              GCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCA                 >  SRR4302540.9407496/1‑94 (MQ=60)

                                                                              GCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCA                 >  SRR4302540.7260800/1‑94 (MQ=60)

                                                                              GCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCA                 >  SRR4302540.9364444/1‑94 (MQ=60)

                                                                               CCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAA                >  SRR4302540.7674461/1‑94 (MQ=60)

                                                                               CCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAA                <  SRR4302540.2003151/94‑1 (MQ=60)

                                                                               CCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAA                <  SRR4302540.3580074/94‑1 (MQ=60)

                                                                                CGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAAT               >  SRR4302540.7147090/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.505067/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.1351649/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.2866263/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.4116559/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.4116558/1‑94 (MQ=60)

                                                                                    GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACACCTTCGCCAGCGTTATAATCCCATGCAATTTGA           >  SRR4302540.9597892/1‑94 (MQ=60)

                                                                                     CTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAA          >  SRR4302540.234973/1‑94 (MQ=60)

                                                                                      TCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAA         >  SRR4302540.8710733/1‑94 (MQ=60)

                                                                                      TCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAA         >  SRR4302540.8625770/1‑94 (MQ=60)

                                                                                      TCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAA         <  SRR4302540.4679674/94‑1 (MQ=60)

                                                                                       CCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAAC        >  SRR4302540.4461083/1‑94 (MQ=60)

                                                                                        CCCTGGGCGGCAGCCTTCAGATACCAGTACATCGTTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATACCATGCAATTTGAAACT       >  SRR4302540.7251309/1‑94 (MQ=60)

                                                                                        CCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACT       <  SRR4302540.7422260/94‑1 (MQ=60)

                                                                                         CCTGGGCGGCCGCATTCAGATAGCAGTACATCGCTTGGTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTCTCATCCCATGTACTTTGAAAGTG      >  SRR4302540.5401447/1‑94 (MQ=48)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACTCCTTCGACAGCGTTATAATCCCGTGCAATTTGCACCTG      >  SRR4302540.5401449/1‑94 (MQ=60)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG      >  SRR4302540.1041873/1‑94 (MQ=60)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG      >  SRR4302540.1042190/1‑94 (MQ=60)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG      >  SRR4302540.5868067/1‑94 (MQ=60)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG      >  SRR4302540.2478098/1‑94 (MQ=60)

                                                                                         CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG      >  SRR4302540.1907679/1‑94 (MQ=60)

                                                                                          CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG     <  SRR4302540.5954442/94‑1 (MQ=60)

                                                                                          CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG     <  SRR4302540.5954443/94‑1 (MQ=60)

                                                                                          CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG     <  SRR4302540.30790/94‑1 (MQ=60)

                                                                                          CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG     <  SRR4302540.5387896/94‑1 (MQ=60)

                                                                                          CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG     <  SRR4302540.9009331/94‑1 (MQ=60)

                                                                                           TGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGG    <  SRR4302540.4854967/94‑1 (MQ=60)

                                                                                            GGGCGGCAGTCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC   <  SRR4302540.1823353/94‑1 (MQ=60)

                                                                                            GGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC   >  SRR4302540.7164146/1‑94 (MQ=60)

                                                                                             GGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGCG  >  SRR4302540.3158859/1‑94 (MQ=60)

AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGCG  >  NC_000913/674970‑675156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`