Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
675,063 |
A→G |
A236A (GCT→GCC) |
ybeQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 675,063 | 0 | A | G | 100.0%
| 687.7
/ NA
| 214 | A236A (GCT→GCC) | ybeQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/110); total (104/110) |
Only 100 of 224 total aligned reads displayed.
CATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG > NC_000913/674974‑675152
|
cATTCAAAGGCATCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCg < 2:812876/93‑1 (MQ=255)
aTTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCgg > 2:3939348/1‑93 (MQ=255)
ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc > 1:1268757/1‑93 (MQ=255)
ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc > 2:4323077/1‑93 (MQ=255)
ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc > 1:4929736/1‑93 (MQ=255)
ttCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGggcggc < 1:3507378/93‑1 (MQ=255)
cAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAg > 1:6115321/1‑93 (MQ=255)
cAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAg > 2:5147970/1‑93 (MQ=255)
aaaGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGc > 2:3196713/1‑93 (MQ=255)
aaGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGcc > 1:1839169/1‑93 (MQ=255)
aaGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGcc < 1:3980737/93‑1 (MQ=255)
aGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCt < 2:4059260/93‑1 (MQ=255)
aGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCt > 2:4996839/1‑93 (MQ=255)
ggCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCtt < 1:1351932/93‑1 (MQ=255)
ggCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCtt < 2:2666712/93‑1 (MQ=255)
gCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTc < 1:5751699/93‑1 (MQ=255)
gCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTc < 1:3516634/93‑1 (MQ=255)
gCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTc < 1:3311624/93‑1 (MQ=255)
aGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAg < 1:4094008/93‑1 (MQ=255)
gCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGa > 2:5932854/1‑93 (MQ=255)
ccTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAt > 1:2535877/1‑93 (MQ=255)
cTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATa > 1:1186008/1‑93 (MQ=255)
tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATCACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc > 1:232842/1‑93 (MQ=255)
tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc > 2:5309607/1‑93 (MQ=255)
tGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAc < 2:2948189/93‑1 (MQ=255)
gATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAcc < 2:2472653/93‑1 (MQ=255)
gATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAcc > 1:4410251/1‑93 (MQ=255)
aTAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCa > 1:5690123/1‑93 (MQ=255)
aaTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGt < 2:2133167/93‑1 (MQ=255)
aaTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGt > 2:2029648/1‑93 (MQ=255)
aaTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGt < 1:5057234/93‑1 (MQ=255)
aTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTa > 1:5291722/1‑93 (MQ=255)
aTCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTa < 2:3761552/93‑1 (MQ=255)
tCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTaa > 1:176045/1‑92 (MQ=255)
tCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTAc < 2:3438537/93‑1 (MQ=255)
tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt < 2:2857176/93‑1 (MQ=255)
tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt > 2:3052851/1‑93 (MQ=255)
tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACAt > 2:4630875/1‑93 (MQ=255)
tttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACAAGTACAt > 2:5072509/1‑93 (MQ=255)
ttCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATc > 2:1813522/1‑93 (MQ=255)
tctcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCg > 2:5789600/1‑93 (MQ=255)
tcAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgct > 1:4829049/1‑93 (MQ=255)
cagcGCCTTGTCCGTGTTTATACATATAGCCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTTCATCgctt < 2:89195/90‑1 (MQ=255)
cAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgctt < 2:3125644/93‑1 (MQ=255)
cAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgctt > 1:2762080/1‑93 (MQ=255)
cGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgcttgct > 1:5384430/1‑93 (MQ=255)
gCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgcttgctt < 2:1620949/93‑1 (MQ=255)
gCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCgcttgctt > 1:4677150/1‑93 (MQ=255)
ccTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTta > 2:1901886/1‑93 (MQ=255)
ccTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTta > 1:733209/1‑93 (MQ=255)
cTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtat > 1:487683/1‑93 (MQ=255)
cTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtat > 1:3014318/1‑93 (MQ=255)
cTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtat > 2:132275/1‑93 (MQ=255)
ttGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtata < 2:6063923/93‑1 (MQ=255)
ttGTCCGTGTTTATACATATAACCGATGTTGACATAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTtata < 1:2686249/93‑1 (MQ=255)
tGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAg > 2:769138/1‑93 (MQ=255)
tGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAg < 2:5848304/93‑1 (MQ=255)
tGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAg > 1:420609/1‑93 (MQ=255)
ccGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTcc < 1:2807637/93‑1 (MQ=255)
ccGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTcc > 2:4177787/1‑93 (MQ=255)
ccGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTcc < 1:4804042/93‑1 (MQ=255)
cGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCt < 2:4463661/93‑1 (MQ=255)
gtgtTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTg > 2:121365/1‑93 (MQ=255)
tgtTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTgg > 1:4559749/1‑93 (MQ=255)
tgtTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTgg > 1:2509505/1‑93 (MQ=255)
tgtTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCAGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTgg < 1:4444131/93‑1 (MQ=255)
ttATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTcc > 2:2744926/1‑93 (MQ=255)
ttATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTcc < 2:145831/93‑1 (MQ=255)
aCATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAccc < 1:3964033/93‑1 (MQ=255)
cATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCAcccc < 2:2374453/93‑1 (MQ=255)
aatatAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTTCATCGCTTGCTTATAGTCCTGGTCCAcccc < 1:3467926/92‑1 (MQ=255)
atatAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCt < 1:4327825/93‑1 (MQ=255)
tataACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCtt > 1:5064171/1‑93 (MQ=255)
taACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCg < 1:385222/93‑1 (MQ=255)
ccGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCa < 1:5591157/93‑1 (MQ=255)
cGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAg < 2:424700/93‑1 (MQ=255)
cGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAg > 1:3055165/1‑93 (MQ=255)
cGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAg < 1:2994054/93‑1 (MQ=255)
gATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGc < 1:6224755/93‑1 (MQ=255)
aTGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCg > 1:1828486/1‑93 (MQ=255)
tGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCTCCCCTTCGCCAGCGTtat < 1:4851113/93‑1 (MQ=255)
tGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTtat < 2:6284635/93‑1 (MQ=255)
gACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCCGCGTtata > 2:1842928/1‑93 (MQ=255)
gACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTtata < 2:415453/93‑1 (MQ=255)
cGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAt < 2:5366590/93‑1 (MQ=255)
gTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATc < 2:27877/93‑1 (MQ=255)
tAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATcc > 2:3342385/1‑93 (MQ=255)
tAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATcc < 2:2099729/93‑1 (MQ=255)
gACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAAt > 2:2615018/1‑93 (MQ=255)
aCGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAAtt > 1:1117585/1‑93 (MQ=255)
cTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGa > 1:5411634/1‑93 (MQ=255)
tCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGaa < 1:259796/93‑1 (MQ=255)
tCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGaa > 1:2375916/1‑93 (MQ=255)
ccccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGaaa > 1:1009061/1‑93 (MQ=255)
cccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAAc > 1:204173/1‑93 (MQ=255)
ccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACt < 2:2218666/93‑1 (MQ=255)
ccTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACt < 2:3977146/93‑1 (MQ=255)
cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg < 1:5823018/93‑1 (MQ=255)
cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg < 1:3673609/93‑1 (MQ=255)
cTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTg < 2:4951495/93‑1 (MQ=255)
|
CATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG > NC_000913/674974‑675152
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC > NC_000913/674970‑675155
|
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG > SRR4302533.4823146/1‑94 (MQ=60)
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG > SRR4302533.2208166/1‑94 (MQ=60)
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG < SRR4302533.296787/94‑1 (MQ=60)
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGG < SRR4302533.1609038/94‑1 (MQ=60)
AACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGG > SRR4302533.3108767/1‑94 (MQ=60)
ATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGC > SRR4302533.1276352/1‑94 (MQ=60)
ATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGC > SRR4302533.4959589/1‑94 (MQ=60)
TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCA > SRR4302533.4342319/1‑94 (MQ=60)
TTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCA < SRR4302533.3529007/94‑1 (MQ=60)
TCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAG > SRR4302533.6152217/1‑94 (MQ=60)
AAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCC > SRR4302533.1850385/1‑94 (MQ=60)
AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCT < SRR4302533.476703/94‑1 (MQ=60)
AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCT < SRR4302533.4286294/94‑1 (MQ=60)
AAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCT < SRR4302533.4004974/94‑1 (MQ=60)
AGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTT < SRR4302533.2605274/94‑1 (MQ=60)
GGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTC < SRR4302533.1360064/94‑1 (MQ=60)
GCAGCCTGATAATCTTTCTCACCGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA < SRR4302533.4574059/94‑1 (MQ=60)
GCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA < SRR4302533.3538314/94‑1 (MQ=60)
GCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA < SRR4302533.3332075/94‑1 (MQ=60)
GCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCA < SRR4302533.5786398/94‑1 (MQ=60)
AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA < SRR4302533.4118929/94‑1 (MQ=60)
AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA < SRR4302533.3427140/94‑1 (MQ=60)
AGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGA > SRR4302533.5777962/1‑94 (MQ=60)
GCCTGATAATCTTTCTCAACGCCTTTTCCGTTTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCACTGGGCGGCAGCCTTCAGAT > SRR4302533.2802909/1‑94 (MQ=60)
GCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGAT > SRR4302533.2551486/1‑94 (MQ=60)
CCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATA > SRR4302533.1193128/1‑94 (MQ=60)
CTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATCACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATAC > SRR4302533.234279/1‑94 (MQ=60)
TGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACC > SRR4302533.4436886/1‑94 (MQ=60)
TGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACC > SRR4302533.2907284/1‑94 (MQ=60)
GATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCA < SRR4302533.1051488/94‑1 (MQ=60)
GATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCA > SRR4302533.5724489/1‑94 (MQ=60)
TAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGT > SRR4302533.1852612/1‑94 (MQ=60)
AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTA < SRR4302533.5087798/94‑1 (MQ=60)
AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTA < SRR4302533.5087799/94‑1 (MQ=60)
AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTA > SRR4302533.5323404/1‑94 (MQ=60)
AATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTA < SRR4302533.3506855/94‑1 (MQ=60)
ATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTAC > SRR4302533.642585/1‑94 (MQ=60)
ATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTAA > SRR4302533.177152/1‑94 (MQ=60)
TCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACA < SRR4302533.5337084/94‑1 (MQ=60)
CTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCT > SRR4302533.4858312/1‑94 (MQ=60)
CTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCT > SRR4302533.4858313/1‑94 (MQ=60)
CTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCT > SRR4302533.2565029/1‑94 (MQ=60)
TCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTT > SRR4302533.2779014/1‑94 (MQ=60)
CAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTG > SRR4302533.3545611/1‑94 (MQ=60)
ACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCT > SRR4302533.5416778/1‑94 (MQ=60)
CGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTT < SRR4302533.3987724/94‑1 (MQ=60)
CGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTT > SRR4302533.4705494/1‑94 (MQ=60)
CGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTT > SRR4302533.1568010/1‑94 (MQ=60)
GCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTA > SRR4302533.737521/1‑94 (MQ=60)
CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT > SRR4302533.3032753/1‑94 (MQ=60)
CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT > SRR4302533.490599/1‑94 (MQ=60)
CCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTAT < SRR4302533.2438083/94‑1 (MQ=60)
TTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAG < SRR4302533.126942/94‑1 (MQ=60)
TTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAG > SRR4302533.423126/1‑94 (MQ=60)
TTGTCCGTGTTTATACATATAACCGATGTTGACATAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAG < SRR4302533.2702717/94‑1 (MQ=60)
TGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGT < SRR4302533.4104828/94‑1 (MQ=60)
GTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTC < SRR4302533.4651296/94‑1 (MQ=60)
CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT > SRR4302533.2136252/1‑94 (MQ=60)
CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT < SRR4302533.4833134/94‑1 (MQ=60)
CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT < SRR4302533.2730994/94‑1 (MQ=60)
CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT < SRR4302533.2969444/94‑1 (MQ=60)
CCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCT < SRR4302533.2824915/94‑1 (MQ=60)
CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG > SRR4302533.1671389/1‑94 (MQ=60)
CGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGAAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTG > SRR4302533.5125614/1‑94 (MQ=60)
GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG < SRR4302533.6065340/94‑1 (MQ=60)
GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG < SRR4302533.4937557/94‑1 (MQ=60)
GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG > SRR4302533.4587404/1‑94 (MQ=60)
GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG > SRR4302533.2524966/1‑94 (MQ=60)
GTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGG > SRR4302533.1784947/1‑94 (MQ=60)
TGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCAGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGT < SRR4302533.4471012/94‑1 (MQ=60)
GTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCATGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTC > SRR4302533.4469315/1‑94 (MQ=60)
TTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCC > SRR4302533.216127/1‑94 (MQ=60)
ATACATATAACCGATGTTGACTTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACC < SRR4302533.5827272/94‑1 (MQ=60)
ACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCC < SRR4302533.49930/94‑1 (MQ=60)
ACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCC < SRR4302533.3988181/94‑1 (MQ=60)
AATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTTCATCGCTTGCTTATAGTCCTGGTCCACCCCT < SRR4302533.3489333/94‑1 (MQ=60)
ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT < SRR4302533.4353895/94‑1 (MQ=60)
ATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTT > SRR4302533.5094764/1‑94 (MQ=60)
TATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTC < SRR4302533.399895/94‑1 (MQ=60)
ATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCG < SRR4302533.3391115/94‑1 (MQ=60)
TAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGC > SRR4302533.1312989/1‑94 (MQ=60)
TAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGC < SRR4302533.387547/94‑1 (MQ=60)
ACCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCA < SRR4302533.353397/94‑1 (MQ=60)
CCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAG > SRR4302533.2367440/1‑94 (MQ=60)
CCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAG < SRR4302533.5624932/94‑1 (MQ=60)
CCGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAG > SRR4302533.3073892/1‑94 (MQ=60)
CGATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGC < SRR4302533.3012360/94‑1 (MQ=60)
GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG > SRR4302533.1839652/1‑94 (MQ=60)
GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG < SRR4302533.2533337/94‑1 (MQ=60)
GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG < SRR4302533.3737928/94‑1 (MQ=60)
GATGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCG < SRR4302533.6262054/94‑1 (MQ=60)
TGTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTT > SRR4302533.6170827/1‑94 (MQ=60)
GTTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTA > SRR4302533.3835851/1‑94 (MQ=60)
TTGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTAT < SRR4302533.4905224/94‑1 (MQ=60)
TGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCTCCCCTTCGCCAGCGTTATA < SRR4302533.4880512/94‑1 (MQ=60)
TGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATA < SRR4302533.4889143/94‑1 (MQ=60)
TGACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATA > SRR4302533.6259662/1‑94 (MQ=60)
ACGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAAT < SRR4302533.5291669/94‑1 (MQ=60)
CGTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATC < SRR4302533.2641510/94‑1 (MQ=60)
GTAAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCC > SRR4302533.5435126/1‑94 (MQ=60)
AAGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCA > SRR4302533.5503151/1‑94 (MQ=60)
AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT < SRR4302533.5104667/94‑1 (MQ=60)
AGCGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCAT < SRR4302533.4641016/94‑1 (MQ=60)
CGCCGACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGC > SRR4302533.5653155/1‑94 (MQ=60)
GACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATT > SRR4302533.1124216/1‑94 (MQ=60)
ACGCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCTCCAGCGTTATAATCCCATGCAATTT > SRR4302533.3021957/1‑94 (MQ=60)
GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA > SRR4302533.5444173/1‑94 (MQ=60)
GCTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGA > SRR4302533.306759/1‑94 (MQ=60)
CTCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAA > SRR4302533.2390616/1‑94 (MQ=60)
TCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAA < SRR4302533.261374/94‑1 (MQ=60)
TCCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAA > SRR4302533.1014965/1‑94 (MQ=60)
CCCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAAC > SRR4302533.205473/1‑94 (MQ=60)
CCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACT < SRR4302533.4876673/94‑1 (MQ=60)
CCCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACT > SRR4302533.1127765/1‑94 (MQ=60)
CCCTGGGCGGCACCCTTCAGATACCAGTTCATCGCTTGCTTATAGTCCTGGTCCCCCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACT < SRR4302533.4142068/94‑1 (MQ=60)
CCTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTG < SRR4302533.3216384/94‑1 (MQ=60)
CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG < SRR4302533.5858190/94‑1 (MQ=60)
CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG < SRR4302533.3696185/94‑1 (MQ=60)
CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG < SRR4302533.5627099/94‑1 (MQ=60)
CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG < SRR4302533.1845737/94‑1 (MQ=60)
CTGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGG < SRR4302533.4416059/94‑1 (MQ=60)
TGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGG < SRR4302533.5084835/94‑1 (MQ=60)
TGGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGG > SRR4302533.6208620/1‑94 (MQ=60)
GGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC < SRR4302533.4873063/94‑1 (MQ=60)
GGGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC < SRR4302533.1649621/94‑1 (MQ=60)
|
AAACCATTCAAAGGCAGCCTGATAATCTTTCTCAACGCCTTGTCCGTGTTTATACATATAACCGATGTTGACGTAAGCGCCGACGCTCCCCTGAGCGGCAGCCTTCAGATACCAGTACATCGCTTGCTTATAGTCCTGGTCCACCCCTTCGCCAGCGTTATAATCCCATGCAATTTGAAACTGGGC > NC_000913/674970‑675155
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
