Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	736,618	T→C	Y98H (TAT→CAT)	ybfL →	putative receptor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	736,618	0	T	C	99.7%	977.7 / ‑5.4	346	Y98H (TAT→CAT)	ybfL	putative receptor protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (163/182); total (163/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

Only 100 of 348 total aligned reads displayed.

TTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCAT  >  NC_000913/736538‑736707

ttAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTg                                                                               <  2:8185907/93‑1 (MQ=17)

  aaaGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTa                                                                             <  2:3717877/93‑1 (MQ=18)

    aGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTaaa                                                                           >  1:9172357/1‑93 (MQ=18)

    aGGAAAAATCATCACAACTGATGCGATGGGGTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTaaa                                                                           >  2:1262883/1‑93 (MQ=16)

     ggAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTaaaa                                                                          >  1:4277454/1‑93 (MQ=18)

     ggAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTaaaa                                                                          <  1:841013/93‑1 (MQ=21)

     ggAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTaaaa                                                                          >  2:5590752/1‑93 (MQ=18)

        aaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGa                                                                       <  1:5219803/93‑1 (MQ=18)

        aaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGa                                                                       >  1:412887/1‑93 (MQ=18)

        aaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGa                                                                       <  2:7172402/93‑1 (MQ=21)

        aaaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGAACATTTATTCGCTGTAAAAGGa                                                                       <  1:3928808/93‑1 (MQ=255)

         aaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaa                                                                      >  2:1767662/1‑93 (MQ=18)

         aaaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaa                                                                      >  1:10010427/1‑93 (MQ=18)

          aaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaaa                                                                     <  1:9474490/93‑1 (MQ=18)

          aaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaaa                                                                     >  1:318725/1‑93 (MQ=18)

          aaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaaa                                                                     <  1:1178464/93‑1 (MQ=18)

          aaTCATCACAACTGATGCGATGGGTTGCCAGAAAGATAGTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaaa                                                                     <  1:8094500/93‑1 (MQ=16)

          aaTCATCACAACTGATGCGATGGATTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGaaa                                                                     >  1:6697503/1‑93 (MQ=16)

           atcatcACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAc                                                                    <  1:5463839/93‑1 (MQ=21)

            tcatcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAcc                                                                   >  2:2261109/1‑93 (MQ=18)

             catcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCa                                                                  <  2:6126819/93‑1 (MQ=21)

              atcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAg                                                                 <  2:4084075/93‑1 (MQ=21)

              atcaCAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAg                                                                 <  2:9638874/93‑1 (MQ=21)

                  caACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAggggg                                                             >  2:6696928/1‑92 (MQ=18)

                  caACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggc                                                             >  2:8757350/1‑93 (MQ=18)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTACAAGGAAACCAGGggcg                                                            >  2:3835612/1‑93 (MQ=16)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcg                                                            <  1:1312823/93‑1 (MQ=18)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcg                                                            >  2:2136246/1‑93 (MQ=18)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcg                                                            >  1:936442/1‑93 (MQ=18)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcg                                                            >  1:8044131/1‑93 (MQ=18)

                   aaCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcg                                                            >  1:6956357/1‑93 (MQ=18)

                    aCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGggcgg                                                           >  1:5867425/1‑93 (MQ=18)

                      tGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCt                                                         <  1:5825976/93‑1 (MQ=14)

                        aTGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTta                                                       >  1:2713405/1‑93 (MQ=17)

                         tGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaa                                                      >  1:9494111/1‑93 (MQ=18)

                         tGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaa                                                      <  2:7455472/93‑1 (MQ=18)

                           cGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaata                                                    <  2:7341587/93‑1 (MQ=18)

                            gATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaataa                                                   <  1:975230/93‑1 (MQ=21)

                            gATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaataa                                                   <  2:6378546/93‑1 (MQ=18)

                            gATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaataa                                                   >  2:2984896/1‑93 (MQ=18)

                            gATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaataa                                                   <  1:3568587/93‑1 (MQ=21)

                            gATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTtaataa                                                   <  1:1774285/93‑1 (MQ=21)

                             aTGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATaaa                                                  >  2:8038981/1‑93 (MQ=18)

                             aTGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATaaa                                                  <  1:2086068/93‑1 (MQ=21)

                              tGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAg                                                 <  2:7828963/93‑1 (MQ=18)

                              tGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAg                                                 <  2:1170366/93‑1 (MQ=21)

                              tGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAg                                                 >  1:2262029/1‑93 (MQ=18)

                               gggTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGc                                                >  1:2561908/1‑93 (MQ=18)

                               gggTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGc                                                >  1:7587608/1‑93 (MQ=18)

                               gggTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGc                                                <  2:9496273/93‑1 (MQ=21)

                                ggTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGcc                                               <  1:9042597/93‑1 (MQ=18)

                                 gTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCt                                              <  1:1600257/93‑1 (MQ=21)

                                   tGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCttt                                            <  2:4829784/93‑1 (MQ=25)

                                   tGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCttt                                            <  2:7611237/93‑1 (MQ=25)

                                   tGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCttt                                            <  1:599769/93‑1 (MQ=25)

                                    gCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTg                                           >  1:8202881/1‑93 (MQ=25)

                                    gCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGACTTTg                                           >  2:6921338/1‑93 (MQ=255)

                                     ccAGAAAGATATTGCAGAGAAGATACAAAGACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGa                                          <  1:9221718/93‑1 (MQ=255)

                                      cAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAg                                         >  1:4356290/1‑93 (MQ=255)

                                      cAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAg                                         <  1:5265047/93‑1 (MQ=255)

                                      cAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAg                                         <  1:1557123/93‑1 (MQ=255)

                                       aGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                        >  2:9179675/1‑93 (MQ=37)

                                       aGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                        >  2:9026321/1‑93 (MQ=255)

                                       aGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                        >  2:5125579/1‑93 (MQ=37)

                                       aGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAgg                                        <  2:305307/93‑1 (MQ=255)

                                        gAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGa                                       >  1:4643140/1‑93 (MQ=255)

                                          aaGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGaaa                                     >  2:5706757/1‑93 (MQ=255)

                                            gATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGaaaaa                                   >  1:6897569/1‑93 (MQ=255)

                                                ttGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTc                               <  1:2286240/93‑1 (MQ=255)

                                                    agagAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCt                           >  1:7268003/1‑93 (MQ=255)

                                                     gagaAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCta                          >  1:4865653/1‑92 (MQ=255)

                                                       gaagaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGaa                        >  1:5635323/1‑93 (MQ=255)

                                                        aagaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGaaa                       >  2:8916976/1‑93 (MQ=255)

                                                        aagaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGaaa                       <  2:7252310/93‑1 (MQ=37)

                                                         agaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAg                      <  2:2456699/93‑1 (MQ=255)

                                                         agaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAg                      >  2:1942804/1‑93 (MQ=255)

                                                         agaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAg                      <  2:2860038/93‑1 (MQ=255)

                                                          gaTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGa                     <  2:4534016/93‑1 (MQ=255)

                                                           aTACAAATACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGaa                    <  2:7689769/93‑1 (MQ=255)

                                                           aTACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGaa                    >  2:592363/1‑93 (MQ=255)

                                                              cAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTa                 >  1:3029687/1‑93 (MQ=255)

                                                                aaaaCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTaaa               >  1:235701/1‑93 (MQ=255)

                                                                aaaaCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTaaa               <  1:5564797/93‑1 (MQ=255)

                                                                 aaaCAGGGAGGTGATGATTTAGTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAaat              <  1:7773161/93‑1 (MQ=255)

                                                                  aaCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAaata             <  2:265394/93‑1 (MQ=37)

                                                                   aCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAaataa            <  2:847598/93‑1 (MQ=37)

                                                                   aCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAaataa            >  1:9107940/1‑93 (MQ=255)

                                                                   aCAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAaataa            <  2:3472834/93‑1 (MQ=255)

                                                                     aGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc          >  1:834170/1‑93 (MQ=255)

                                                                     aGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc          <  1:7539997/93‑1 (MQ=255)

                                                                     aGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc          >  1:3486237/1‑93 (MQ=255)

                                                                     aGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATc          >  1:3750503/1‑93 (MQ=255)

                                                                       ggAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCa        >  1:7039717/1‑93 (MQ=255)

                                                                       ggAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCa        <  2:5813291/93‑1 (MQ=37)

                                                                       ggAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCa        <  1:6578340/93‑1 (MQ=255)

                                                                        gAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCag       <  2:3268994/93‑1 (MQ=255)

                                                                           gTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGc    >  2:65615/1‑93 (MQ=255)

                                                                           gTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGc    <  1:9968250/93‑1 (MQ=255)

                                                                            tGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCa   <  2:153279/93‑1 (MQ=255)

                                                                            tGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCa   >  1:2425590/1‑93 (MQ=255)

TTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCAT  >  NC_000913/736538‑736707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 241 total aligned reads displayed.

AACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACA  >  NC_000913/736525‑736711

ACCATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATT                                                                                               <  SRR4302540.9912542/94‑1 (MQ=0)

AACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATT                                                                                               <  SRR4302540.2505373/94‑1 (MQ=0)

 ACATGCTGGATATTAAAGGAAAAATCATCACATCTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCA                                                                                              <  SRR4302540.4615346/94‑1 (MQ=0)

 ACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTA                                                                                              >  SRR4302540.4844673/1‑94 (MQ=0)

 ACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTA                                                                                              <  SRR4302540.5290889/94‑1 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTAT                                                                                             >  SRR4302540.3939183/1‑94 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTAT                                                                                             <  SRR4302540.3969434/94‑1 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTAT                                                                                             <  SRR4302540.4657447/94‑1 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTAT                                                                                             >  SRR4302540.5193306/1‑94 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCAT                                                                                             <  SRR4302540.79370/94‑1 (MQ=0)

  CATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCAT                                                                                             >  SRR4302540.3549377/1‑94 (MQ=0)

   ATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATT                                                                                            >  SRR4302540.5423193/1‑94 (MQ=0)

   ATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGCGATAATT                                                                                            >  SRR4302540.5423192/1‑94 (MQ=0)

   ATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGANANAAAAACAGGGNGGNGNTTATT                                                                                            >  SRR4302540.9503907/1‑94 (MQ=0)

    TGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTT                                                                                           >  SRR4302540.9356276/1‑94 (MQ=0)

    TGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTT                                                                                           >  SRR4302540.2118518/1‑94 (MQ=0)

      CTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTAT                                                                                         >  SRR4302540.1238876/1‑94 (MQ=0)

      CTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTAT                                                                                         >  SRR4302540.4736721/1‑94 (MQ=0)

       TGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTAATT                                                                                        >  SRR4302540.1780055/1‑94 (MQ=0)

        GGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTC                                                                                       >  SRR4302540.4581799/1‑94 (MQ=0)

        GGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTC                                                                                       <  SRR4302540.9377545/94‑1 (MQ=0)

        GGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTC                                                                                       <  SRR4302540.5698210/94‑1 (MQ=0)

        GGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTC                                                                                       <  SRR4302540.7710670/94‑1 (MQ=0)

        GGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTC                                                                                       <  SRR4302540.5778181/94‑1 (MQ=0)

         GATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCG                                                                                      <  SRR4302540.4229705/94‑1 (MQ=0)

         GATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCG                                                                                      >  SRR4302540.8527490/1‑94 (MQ=0)

         GATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCG                                                                                      <  SRR4302540.2238185/94‑1 (MQ=0)

         GATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCG                                                                                      <  SRR4302540.7413484/94‑1 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAACACAGGGAGGTGATTATTTATTCGC                                                                                     >  SRR4302540.6749815/1‑94 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGC                                                                                     >  SRR4302540.7753772/1‑94 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGC                                                                                     >  SRR4302540.9109211/1‑94 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGC                                                                                     <  SRR4302540.9929980/94‑1 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGC                                                                                     >  SRR4302540.7367374/1‑94 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGC                                                                                     >  SRR4302540.7367377/1‑94 (MQ=0)

          ATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGC                                                                                     <  SRR4302540.6460367/94‑1 (MQ=0)

            ATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTG                                                                                   >  SRR4302540.2606161/1‑94 (MQ=0)

            ATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTG                                                                                   >  SRR4302540.5782779/1‑94 (MQ=0)

              TAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTA                                                                                 >  SRR4302540.6808238/1‑94 (MQ=5)

               AAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAA                                                                                <  SRR4302540.4584016/94‑1 (MQ=8)

               AAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAA                                                                                >  SRR4302540.6724268/1‑94 (MQ=8)

                AAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAA                                                                               >  SRR4302540.9282390/1‑94 (MQ=8)

                 AGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAA                                                                              >  SRR4302540.7069842/1‑94 (MQ=8)

                 AGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAA                                                                              >  SRR4302540.4323976/1‑94 (MQ=8)

                  GGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAG                                                                             <  SRR4302540.9596497/94‑1 (MQ=8)

                  GGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAG                                                                             <  SRR4302540.849935/94‑1 (MQ=8)

                  GGAAAAATCATCACAACTGATGCGATGGGATGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAG                                                                             <  SRR4302540.2475278/94‑1 (MQ=7)

                  AGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAG                                                                             <  SRR4302540.7751725/94‑1 (MQ=7)

                   GAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGA                                                                            >  SRR4302540.5290729/1‑94 (MQ=7)

                    tgaatgttaattctgtcaataaagtcaacgtaAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           >  SRR4302540.9558195/33‑94 (MQ=0)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGGGAAGATACAAAAATATGGAGGATATCATTTATTCGCTGTAAAAGGA                                                                           >  SRR4302540.5975938/1‑94 (MQ=5)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           >  SRR4302540.417214/1‑94 (MQ=8)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           <  SRR4302540.9281044/94‑1 (MQ=8)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           >  SRR4302540.9630578/1‑94 (MQ=8)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           <  SRR4302540.8154096/94‑1 (MQ=8)

                    AAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGA                                                                           >  SRR4302540.2633191/1‑94 (MQ=8)

                     AAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAA                                                                          <  SRR4302540.5276707/94‑1 (MQ=8)

                     AAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAA                                                                          >  SRR4302540.2366419/1‑94 (MQ=8)

                     AAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAA                                                                          <  SRR4302540.8444827/94‑1 (MQ=8)

                     AAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAA                                                                          >  SRR4302540.10126991/1‑94 (MQ=8)

                      AAATCATCACAACTGATGCGATGGATTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAA                                                                         >  SRR4302540.6771433/1‑94 (MQ=7)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        <  SRR4302540.1190643/94‑1 (MQ=8)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        <  SRR4302540.8188455/94‑1 (MQ=8)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        >  SRR4302540.1445711/1‑94 (MQ=8)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        <  SRR4302540.6763068/94‑1 (MQ=8)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        <  SRR4302540.3211346/94‑1 (MQ=8)

                       AATCATCACAACTGATGCGATGGGTTGCCAGAAAGATAGTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAAC                                                                        <  SRR4302540.8188456/94‑1 (MQ=7)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAATATATTGCAGAGAAGATACAAAAACTGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.9372394/94‑1 (MQ=9)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.1240937/94‑1 (MQ=10)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.9274982/94‑1 (MQ=10)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.7578827/94‑1 (MQ=10)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.5523978/94‑1 (MQ=10)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.8859163/94‑1 (MQ=10)

                        ATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACC                                                                       <  SRR4302540.8396496/94‑1 (MQ=10)

                         TCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCA                                                                      >  SRR4302540.5894454/1‑94 (MQ=10)

                           ATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGG                                                                    <  SRR4302540.7784237/94‑1 (MQ=10)

                           ATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGG                                                                    >  SRR4302540.9594616/1‑94 (MQ=10)

                           ATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGG                                                                    <  SRR4302540.9282710/94‑1 (MQ=10)

                            TCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGG                                                                   <  SRR4302540.5556230/94‑1 (MQ=10)

                            TCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGG                                                                   >  SRR4302540.1930353/1‑94 (MQ=10)

                            TCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGG                                                                   <  SRR4302540.4324003/94‑1 (MQ=10)

                             CACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGG                                                                  >  SRR4302540.4274008/1‑94 (MQ=8)

                              ACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGC                                                                 >  SRR4302540.7548041/1‑94 (MQ=8)

                              ACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGC                                                                 >  SRR4302540.9167409/1‑94 (MQ=8)

                              ACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGC                                                                 >  SRR4302540.9167407/1‑94 (MQ=8)

                               CAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCG                                                                >  SRR4302540.7033750/1‑94 (MQ=8)

                               CAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCG                                                                >  SRR4302540.835947/1‑94 (MQ=8)

                               CAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCG                                                                >  SRR4302540.8137590/1‑94 (MQ=8)

                                AACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGG                                                               >  SRR4302540.5932294/1‑94 (MQ=5)

                                 ACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGC                                                              <  SRR4302540.6330137/94‑1 (MQ=3)

                                  CTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCT                                                             >  SRR4302540.9469865/1‑94 (MQ=0)

                                   TGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTT                                                            <  SRR4302540.5890381/94‑1 (MQ=0)

                                   TGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTAGCTGTAAAAGGAAACCAGGGGCGGCTT                                                            >  SRR4302540.4134659/1‑94 (MQ=0)

                                    GATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTA                                                           >  SRR4302540.7390166/1‑94 (MQ=0)

                                    GATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTA                                                           >  SRR4302540.2742664/1‑94 (MQ=0)

                                     ATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAT                                                          >  SRR4302540.3674407/1‑94 (MQ=0)

                                     ATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAA                                                          >  SRR4302540.9606639/1‑94 (MQ=5)

                                     ATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAA                                                          <  SRR4302540.6880930/94‑1 (MQ=5)

                                      TGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAAT                                                         <  SRR4302540.5313723/94‑1 (MQ=7)

                                      TGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAAT                                                         <  SRR4302540.5350131/94‑1 (MQ=7)

                                        CGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAA                                                       <  SRR4302540.1138647/94‑1 (MQ=10)

                                        CGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGAGGCTTAATAA                                                       >  SRR4302540.7102610/1‑94 (MQ=9)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.1021816/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.6980589/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.6980333/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.5215112/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.3607569/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.3607570/94‑1 (MQ=10)

                                         GATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAA                                                      <  SRR4302540.985240/94‑1 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGTTTAATAAAG                                                     >  SRR4302540.3562008/1‑94 (MQ=9)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     <  SRR4302540.7930205/94‑1 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     >  SRR4302540.2286302/1‑94 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     <  SRR4302540.9645086/94‑1 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     >  SRR4302540.4162935/1‑94 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     <  SRR4302540.2108481/94‑1 (MQ=10)

                                          ATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAG                                                     >  SRR4302540.2464172/1‑94 (MQ=10)

                                           TGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGC                                                    >  SRR4302540.7672818/1‑94 (MQ=10)

                                           TGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGC                                                    <  SRR4302540.2401224/94‑1 (MQ=10)

                                           TGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGC                                                    <  SRR4302540.5869014/94‑1 (MQ=10)

                                             GGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCT                                                  <  SRR4302540.2351530/94‑1 (MQ=10)

                                             GGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCT                                                  <  SRR4302540.9151141/94‑1 (MQ=10)

                                              GTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTT                                                 <  SRR4302540.1617759/94‑1 (MQ=10)

                                              GTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTT                                                 >  SRR4302540.1195927/1‑94 (MQ=10)

                                              GTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTT                                                 <  SRR4302540.6236317/94‑1 (MQ=10)

                                                TGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTG                                               >  SRR4302540.8298206/1‑94 (MQ=15)

                                                TGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTG                                               <  SRR4302540.606199/94‑1 (MQ=15)

                                                TGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTG                                               >  SRR4302540.1649791/1‑94 (MQ=15)

                                                 GCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGA                                              <  SRR4302540.3496726/94‑1 (MQ=20)

                                                  CCAGAAAGATATTGCAGAGAAGATACAAAGACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAG                                             <  SRR4302540.9332306/94‑1 (MQ=22)

                                                   CAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGG                                            <  SRR4302540.1574240/94‑1 (MQ=25)

                                                    AGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGA                                           >  SRR4302540.4692847/1‑94 (MQ=25)

                                                     GAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGTTTAATAAAGCCTTTGAGGAA                                          <  SRR4302540.9380485/94‑1 (MQ=24)

                                                     GAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAA                                          <  SRR4302540.2309804/94‑1 (MQ=25)

                                                     GAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAA                                          <  SRR4302540.2309805/94‑1 (MQ=25)

                                                       AAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAA                                        <  SRR4302540.6593650/94‑1 (MQ=25)

                                                        AGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGTAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAA                                       <  SRR4302540.4538557/94‑1 (MQ=24)

                                                        AGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGTAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAT                                       >  SRR4302540.2467489/1‑94 (MQ=24)

                                                        AGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAA                                       >  SRR4302540.6974149/1‑94 (MQ=25)

                                                         GATATTGCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAAT                                      >  SRR4302540.10056655/1‑94 (MQ=25)

                                                               GCAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGC                                <  SRR4302540.763316/94‑1 (MQ=25)

                                                                CAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCT                               <  SRR4302540.8125223/94‑1 (MQ=25)

                                                                CAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCT                               >  SRR4302540.7349099/1‑94 (MQ=25)

                                                                CAGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCT                               <  SRR4302540.3038477/94‑1 (MQ=25)

                                                                 AGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTG                              >  SRR4302540.5282471/1‑94 (MQ=25)

                                                                 AGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTG                              >  SRR4302540.2176290/1‑94 (MQ=25)

                                                                 AGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTG                              >  SRR4302540.4917834/1‑94 (MQ=25)

                                                                 AGAGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTA                              >  SRR4302540.4917835/1‑94 (MQ=25)

                                                                   AGAAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAA                            >  SRR4302540.5697344/1‑94 (MQ=25)

                                                                     AAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAG                          <  SRR4302540.8368198/94‑1 (MQ=26)

                                                                     AAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAG                          >  SRR4302540.2100862/1‑94 (MQ=25)

                                                                     AAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAG                          <  SRR4302540.9575715/94‑1 (MQ=25)

                                                                     AAGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGATTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAG                          <  SRR4302540.2215330/94‑1 (MQ=24)

                                                                      AGATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGGTTAATAAAGCCTTTGAGGAAACGTTTCCGCTGAAAGC                         >  SRR4302540.3431955/1‑94 (MQ=22)

                                                                        ATACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAAT                       <  SRR4302540.5922321/94‑1 (MQ=25)

                                                                          ACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTA                     >  SRR4302540.3062958/1‑94 (MQ=25)

                                                                          ACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTA                     >  SRR4302540.9530328/1‑94 (MQ=25)

                                                                          ACAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTA                     >  SRR4302540.8197966/1‑94 (MQ=25)

                                                                           CAAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAA                    <  SRR4302540.4359740/94‑1 (MQ=25)

                                                                            AAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAA                   <  SRR4302540.1367834/94‑1 (MQ=25)

                                                                            AAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAA                   >  SRR4302540.4767578/1‑94 (MQ=25)

                                                                            AAAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAA                   >  SRR4302540.237985/1‑94 (MQ=25)

                                                                             AAAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAAT                  <  SRR4302540.5626072/94‑1 (MQ=25)

                                                                              AAACAGGGAGGTGATGATTTAGTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATA                 <  SRR4302540.7864029/94‑1 (MQ=24)

                                                                              AAACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATA                 <  SRR4302540.334927/94‑1 (MQ=25)

                                                                               AACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAA                <  SRR4302540.564214/94‑1 (MQ=25)

                                                                               AACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAA                >  SRR4302540.9217399/1‑94 (MQ=25)

                                                                               AACAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAA                <  SRR4302540.1578806/94‑1 (MQ=25)

                                                                                 CAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATC              >  SRR4302540.843030/1‑94 (MQ=25)

                                                                                 CAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATC              >  SRR4302540.3524202/1‑94 (MQ=25)

                                                                                 CAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATC              >  SRR4302540.3791423/1‑94 (MQ=25)

                                                                                 CAGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATC              <  SRR4302540.4131464/94‑1 (MQ=25)

                                                                                  AGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCC             <  SRR4302540.1670251/94‑1 (MQ=25)

                                                                                  AGGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCC             <  SRR4302540.7624463/94‑1 (MQ=25)

                                                                                   GGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCA            >  SRR4302540.7117980/1‑94 (MQ=25)

                                                                                   GGGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCA            >  SRR4302540.5676925/1‑94 (MQ=25)

                                                                                    GGAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAG           <  SRR4302540.6651209/94‑1 (MQ=25)

                                                                                     GAGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGA          >  SRR4302540.4348783/1‑94 (MQ=38)

                                                                                      AGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAG         >  SRR4302540.2327186/1‑94 (MQ=38)

                                                                                      AGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAG         >  SRR4302540.5910666/1‑94 (MQ=38)

                                                                                      AGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAG         >  SRR4302540.547189/1‑94 (MQ=38)

                                                                                      AGGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAG         >  SRR4302540.7118901/1‑94 (MQ=38)

                                                                                       GGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGC        >  SRR4302540.3211046/1‑94 (MQ=38)

                                                                                       GGTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGC        <  SRR4302540.3956494/94‑1 (MQ=38)

                                                                                        GTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCA       >  SRR4302540.2451722/1‑94 (MQ=38)

                                                                                        GTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCA       >  SRR4302540.2971996/1‑94 (MQ=38)

                                                                                        GTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCA       >  SRR4302540.8721735/1‑94 (MQ=38)

                                                                                        GTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCA       <  SRR4302540.1674733/94‑1 (MQ=38)

                                                                                        GTGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCA       <  SRR4302540.10084539/94‑1 (MQ=38)

                                                                                         TGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCAT      <  SRR4302540.3880343/94‑1 (MQ=38)

                                                                                         TGATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCAT      >  SRR4302540.1453806/1‑94 (MQ=38)

                                                                                          GATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATG     >  SRR4302540.3714308/1‑94 (MQ=38)

                                                                                          GATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATG     >  SRR4302540.6355107/1‑94 (MQ=38)

                                                                                           ATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGA    >  SRR4302540.10072428/1‑94 (MQ=38)

                                                                                           ATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGA    >  SRR4302540.5224372/1‑94 (MQ=38)

                                                                                           ATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGA    >  SRR4302540.5670024/1‑94 (MQ=38)

                                                                                           ATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGA    >  SRR4302540.653152/1‑94 (MQ=38)

                                                                                           ATCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGA    <  SRR4302540.6582940/94‑1 (MQ=38)

                                                                                            TCATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGAC   <  SRR4302540.9736185/94‑1 (MQ=39)

                                                                                             CATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACA  >  SRR4302540.2758735/1‑94 (MQ=39)

                                                                                             CATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACA  >  SRR4302540.9233966/1‑94 (MQ=39)

                                                                                             CATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACA  <  SRR4302540.7706325/94‑1 (MQ=39)

AACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACA  >  NC_000913/736525‑736711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`