Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 873,303 C→T L368F (CTC→TTC)  b0833 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913873,3030CT100.0% 1786.4 / NA 486L368F (CTC→TTC) b0833hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (235/251);  total (235/251)

Only 100 of 499 total aligned reads displayed.

ATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGG  >  NC_000913/873213‑873392
                                                                                          |                                                                                         
aTTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGttc                                                                                         <  2:904952/93‑1 (MQ=255)
 ttCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGttct                                                                                        <  2:2959683/93‑1 (MQ=255)
   cGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCa                                                                                      <  1:6786186/93‑1 (MQ=255)
     tGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACt                                                                                    >  1:6632241/1‑93 (MQ=255)
      gAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTg                                                                                   <  2:4369409/93‑1 (MQ=255)
      gAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTg                                                                                   <  1:3667800/93‑1 (MQ=255)
       aaGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGa                                                                                  <  1:9629223/93‑1 (MQ=255)
       aaGGCGATGCGAAAGAGATTATCAGCAGCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGGCAAATAAATTGTTCTCACTGa                                                                                  >  1:9088210/1‑93 (MQ=255)
         ggCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAtc                                                                                >  1:8201693/1‑93 (MQ=255)
          gCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAtct                                                                               >  2:5593395/1‑93 (MQ=255)
           cGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAtctc                                                                              <  2:3368303/93‑1 (MQ=255)
            gATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATctct                                                                             >  2:396171/1‑93 (MQ=255)
              tGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTa                                                                           <  2:4150835/93‑1 (MQ=255)
              tGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTa                                                                           <  2:4992077/93‑1 (MQ=255)
                cGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACg                                                                         >  1:3916061/1‑93 (MQ=255)
                 gAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATACCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGa                                                                        <  2:8213906/93‑1 (MQ=255)
                  aaaGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGAt                                                                       >  1:7832159/1‑93 (MQ=255)
                   aaGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATc                                                                      <  2:1976668/93‑1 (MQ=255)
                    agagATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATcg                                                                     >  1:8586917/1‑92 (MQ=255)
                    agagATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCa                                                                     <  2:3886276/93‑1 (MQ=255)
                      agaTTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAgg                                                                   >  1:1788860/1‑93 (MQ=255)
                         ttATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGaaa                                                                <  1:3537691/93‑1 (MQ=255)
                         ttATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGaaa                                                                <  2:5886163/93‑1 (MQ=255)
                         ttATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGaaa                                                                <  1:8772872/93‑1 (MQ=255)
                         ttATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGaaa                                                                <  2:4486294/93‑1 (MQ=255)
                         ttATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGaaa                                                                >  1:5488670/1‑93 (MQ=255)
                          tATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAg                                                               <  2:9614737/93‑1 (MQ=255)
                          tATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAg                                                               >  1:1473001/1‑93 (MQ=255)
                          tATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAg                                                               <  1:710301/93‑1 (MQ=255)
                           aTCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGt                                                              >  2:7365620/1‑93 (MQ=255)
                              aGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGt                                                           <  1:1935854/93‑1 (MQ=255)
                              aGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGt                                                           >  2:4774378/1‑93 (MQ=255)
                               gCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATCAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGtt                                                          >  2:7192869/1‑93 (MQ=255)
                               gCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGtt                                                          <  1:5675456/93‑1 (MQ=255)
                               gCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGtt                                                          >  2:9195393/1‑93 (MQ=255)
                                cATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGttt                                                         <  2:4039797/93‑1 (MQ=255)
                                  tCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGttttt                                                       >  1:751083/1‑92 (MQ=255)
                                  tCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTtta                                                       >  2:9386499/1‑93 (MQ=255)
                                  tCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGGTtta                                                       >  2:3104751/1‑93 (MQ=255)
                                   cAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTttat                                                      <  2:5420092/93‑1 (MQ=255)
                                    aaaaaTTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTttatt                                                     >  2:3810309/1‑93 (MQ=255)
                                     aaaaTTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTttatta                                                    <  1:2094804/93‑1 (MQ=255)
                                     aaaaTTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTttatta                                                    <  1:9836342/93‑1 (MQ=255)
                                        aTTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTaaaa                                                 <  2:7982996/93‑1 (MQ=255)
                                         ttCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTaaaaa                                                >  2:131243/1‑93 (MQ=255)
                                         ttCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTaaaaa                                                <  1:1136953/93‑1 (MQ=255)
                                           cGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAata                                              <  2:8702361/93‑1 (MQ=255)
                                           cGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAata                                              <  2:6343024/93‑1 (MQ=255)
                                           cGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAata                                              <  1:6394372/93‑1 (MQ=255)
                                            gATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAatat                                             <  1:2892940/93‑1 (MQ=255)
                                             aTCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATg                                            >  1:2641710/1‑93 (MQ=255)
                                             aTCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATg                                            >  1:4562160/1‑93 (MQ=255)
                                                gcgGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCg                                         >  1:8156731/1‑93 (MQ=255)
                                                  ggAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGat                                       <  1:5768895/93‑1 (MQ=255)
                                                   gAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGatt                                      <  1:1347597/93‑1 (MQ=255)
                                                    aaaTGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGatta                                     <  1:3720171/93‑1 (MQ=255)
                                                    aaaTGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGatta                                     <  2:7633916/93‑1 (MQ=255)
                                                     aaTGAAAGATGCCGAAATTGATCGGGCAAACAAATTGTTCTCACTGTTCTCTTACAATCAGGAAAGTGGTTTTATTAAAAATATTGCGattat                                    >  2:3569359/1‑93 (MQ=255)
                                                     aaTGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGattat                                    >  1:6872138/1‑93 (MQ=255)
                                                     aaTGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGattat                                    <  2:7705662/93‑1 (MQ=255)
                                                        gAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGa                                 <  2:6860089/93‑1 (MQ=255)
                                                        gAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGa                                 >  2:2764003/1‑93 (MQ=255)
                                                         aaaGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAg                                >  1:3257623/1‑93 (MQ=255)
                                                         aaaGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAg                                <  2:4077553/93‑1 (MQ=255)
                                                          aaGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGt                               >  1:849102/1‑93 (MQ=255)
                                                           aGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTGTTGAGTc                              <  2:6034785/93‑1 (MQ=255)
                                                           aGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTc                              <  1:3383296/93‑1 (MQ=255)
                                                            gATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCt                             >  1:9932532/1‑93 (MQ=255)
                                                             aTGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTa                            >  1:8096211/1‑93 (MQ=255)
                                                             aTGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTa                            >  1:5140857/1‑93 (MQ=255)
                                                             aTGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTa                            >  2:1566436/1‑93 (MQ=255)
                                                              tGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTaa                           <  2:6160962/93‑1 (MQ=255)
                                                               gCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAAc                          <  2:7469840/93‑1 (MQ=255)
                                                                  gAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACaat                       >  1:425775/1‑93 (MQ=255)
                                                                  gAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACaat                       <  1:77823/93‑1 (MQ=255)
                                                                   aaaTTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACaata                      <  1:2385864/93‑1 (MQ=255)
                                                                     aTTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACaataat                    <  1:5842570/93‑1 (MQ=255)
                                                                      ttGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATc                   <  1:4835885/93‑1 (MQ=255)
                                                                       tGAACGGTCAAATAAATTGTTCTCACTTATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATcg                  >  1:1302520/1‑92 (MQ=255)
                                                                        gAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAg                 >  1:2947212/1‑93 (MQ=255)
                                                                        gAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAg                 <  2:10002152/93‑1 (MQ=255)
                                                                          aCGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGACTATTGAGTCTAACAATAATCAGTa               <  1:5318111/93‑1 (MQ=255)
                                                                            ggTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATc             >  1:9327880/1‑93 (MQ=255)
                                                                             gTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCt            >  1:9404808/1‑93 (MQ=255)
                                                                             gTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCt            >  2:5188016/1‑93 (MQ=255)
                                                                              tCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTg           >  2:2654257/1‑93 (MQ=255)
                                                                              tCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTg           >  2:8068349/1‑93 (MQ=255)
                                                                               cAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTgg          <  1:2309731/93‑1 (MQ=255)
                                                                                aaataaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGc         <  2:7014682/93‑1 (MQ=255)
                                                                                 aataaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCt        <  1:6231078/93‑1 (MQ=255)
                                                                                 aataaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCt        <  2:1780839/93‑1 (MQ=255)
                                                                                 aataaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCt        >  1:887131/1‑93 (MQ=255)
                                                                                   taaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCtgt      >  2:8309810/1‑93 (MQ=255)
                                                                                    aaatTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCtgtg     <  1:10038653/93‑1 (MQ=255)
                                                                                    aaatTGTTCTCACTGATCTCTTAAGTTCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCtgtg     <  1:4182638/93‑1 (MQ=255)
                                                                                      atTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTggg   <  2:219310/93‑1 (MQ=255)
                                                                                      atTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTggg   >  2:1179179/1‑93 (MQ=255)
                                                                                       ttGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTgggg  >  2:8559912/1‑93 (MQ=255)
                                                                                       ttGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTgggg  <  2:6475344/93‑1 (MQ=255)
                                                                                       ttGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTgggg  <  2:4876025/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGG  >  NC_000913/873213‑873392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 268 total aligned reads displayed.
AAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCA  >  NC_000913/873210‑873396
                                                                                             |                                                                                             
AAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGT                                                                                               >  SRR4302540.2709268/1‑94 (MQ=60)
 AAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTT                                                                                              <  SRR4302540.1846046/94‑1 (MQ=60)
   ATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCT                                                                                            >  SRR4302540.655357/1‑94 (MQ=60)
   ATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCT                                                                                            <  SRR4302540.1279113/94‑1 (MQ=60)
    TTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTC                                                                                           <  SRR4302540.7788798/94‑1 (MQ=60)
     TCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCA                                                                                          <  SRR4302540.7651318/94‑1 (MQ=60)
      CGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCAC                                                                                         <  SRR4302540.6861222/94‑1 (MQ=60)
      CGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCAC                                                                                         >  SRR4302540.6224682/1‑94 (MQ=60)
      CGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCAC                                                                                         >  SRR4302540.4000157/1‑94 (MQ=60)
       gtgggggcgcTGCGAAAGCGATTGTCAGCGTCACAAGTTCGATCGCGGAAATGAAAGATGCCGAAATTGCACGGTCAAATAAATTGTTCTCACT                                                                                        <  SRR4302540.7786216/84‑1 (MQ=58)
       GTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACT                                                                                        >  SRR4302540.6705651/1‑94 (MQ=60)
       GTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACT                                                                                        <  SRR4302540.9493108/94‑1 (MQ=60)
       GTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACT                                                                                        >  SRR4302540.6705650/1‑94 (MQ=60)
       GTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACT                                                                                        >  SRR4302540.5791870/1‑94 (MQ=60)
        TGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTG                                                                                       >  SRR4302540.793646/1‑94 (MQ=60)
        TGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTG                                                                                       >  SRR4302540.4687198/1‑94 (MQ=60)
         GAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGA                                                                                      <  SRR4302540.3707924/94‑1 (MQ=60)
         GAAGGCGATGCGAAAGAGATTATCAGCAGCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGGCAAATAAATTGTTCTCACTGA                                                                                      >  SRR4302540.9197391/1‑94 (MQ=60)
          AAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAT                                                                                     <  SRR4302540.9742692/94‑1 (MQ=60)
          AAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAT                                                                                     >  SRR4302540.7903527/1‑94 (MQ=60)
           AGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATC                                                                                    >  SRR4302540.8928486/1‑94 (MQ=60)
           AGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATC                                                                                    >  SRR4302540.8297001/1‑94 (MQ=60)
             GCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTT                                                                                  >  SRR4302540.3580591/1‑94 (MQ=60)
             GCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTC                                                                                  <  SRR4302540.6108482/94‑1 (MQ=60)
              CGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCT                                                                                 >  SRR4302540.6402281/1‑94 (MQ=60)
              CGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCT                                                                                 >  SRR4302540.3495078/1‑94 (MQ=60)
              AGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCT                                                                                 <  SRR4302540.9850272/94‑1 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                >  SRR4302540.8211894/1‑94 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                <  SRR4302540.2610190/94‑1 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                >  SRR4302540.7930679/1‑94 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                >  SRR4302540.1326122/1‑94 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                >  SRR4302540.3832142/1‑94 (MQ=60)
               GATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTT                                                                                >  SRR4302540.1326123/1‑94 (MQ=60)
                ATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTA                                                                               >  SRR4302540.6501548/1‑94 (MQ=60)
                ATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTA                                                                               <  SRR4302540.1485824/94‑1 (MQ=60)
                ATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTA                                                                               >  SRR4302540.4054681/1‑94 (MQ=60)
                 TGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTAC                                                                              <  SRR4302540.3622420/94‑1 (MQ=60)
                 TGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTAC                                                                              <  SRR4302540.6909132/94‑1 (MQ=60)
                  GCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACG                                                                             >  SRR4302540.3958465/1‑94 (MQ=60)
                   CGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGC                                                                            >  SRR4302540.1817252/1‑94 (MQ=60)
                   CGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGA                                                                            >  SRR4302540.8643131/1‑94 (MQ=60)
                    GAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGAT                                                                           >  SRR4302540.7923670/1‑94 (MQ=60)
                    GAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGAT                                                                           >  SRR4302540.7923669/1‑94 (MQ=60)
                     AAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATC                                                                          >  SRR4302540.2489113/1‑94 (MQ=60)
                     AAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATC                                                                          <  SRR4302540.2058698/94‑1 (MQ=60)
                     AAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATC                                                                          >  SRR4302540.9488841/1‑94 (MQ=60)
                     AAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATC                                                                          >  SRR4302540.9672322/1‑94 (MQ=60)
                     AAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATA                                                                          >  SRR4302540.5175812/1‑94 (MQ=60)
                      aaagacatgttaagcaacaaaagtcgtgcgctgaaactaacaacGCCGAAATTGACCGGTCAAATAAATGGTTCTCACTGATCTCTTACGATCA                                                                         <  SRR4302540.7552455/50‑1 (MQ=44)
                      AAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCG                                                                         >  SRR4302540.8686739/1‑94 (MQ=60)
                      AAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCA                                                                         >  SRR4302540.6973399/1‑94 (MQ=60)
                      AAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCA                                                                         <  SRR4302540.10013769/94‑1 (MQ=60)
                       AGAGATTATCAGCATCAAAAATTCGATCGGGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAG                                                                        <  SRR4302540.5867164/94‑1 (MQ=60)
                       AGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAG                                                                        <  SRR4302540.5867165/94‑1 (MQ=60)
                       AGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGAGCTCTTACGATCAG                                                                        >  SRR4302540.9096288/1‑94 (MQ=60)
                        GAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGG                                                                       >  SRR4302540.1808305/1‑94 (MQ=60)
                        GAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGG                                                                       <  SRR4302540.2098502/94‑1 (MQ=60)
                        GAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGG                                                                       <  SRR4302540.8141602/94‑1 (MQ=60)
                         AGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGA                                                                      >  SRR4302540.2510582/1‑94 (MQ=60)
                         AGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGA                                                                      >  SRR4302540.3427505/1‑94 (MQ=60)
                          GATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAA                                                                     <  SRR4302540.1548633/94‑1 (MQ=60)
                          GATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAA                                                                     >  SRR4302540.3410575/1‑94 (MQ=60)
                           ATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAA                                                                    >  SRR4302540.4925042/1‑94 (MQ=60)
                           ATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAA                                                                    >  SRR4302540.5549091/1‑94 (MQ=60)
                           ATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAA                                                                    <  SRR4302540.2283824/94‑1 (MQ=60)
                           ATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAA                                                                    >  SRR4302540.7175286/1‑94 (MQ=60)
                           ATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAA                                                                    >  SRR4302540.4632776/1‑94 (MQ=60)
                            TTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCACAGAAGTTGTTCTCCCTGATCTCTTCCGATCAGGCAAG                                                                   >  SRR4302540.4548901/1‑94 (MQ=60)
                            TTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAG                                                                   >  SRR4302540.8919268/1‑94 (MQ=60)
                            TTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAG                                                                   <  SRR4302540.3576317/94‑1 (MQ=60)
                            TTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAG                                                                   >  SRR4302540.4548902/1‑94 (MQ=60)
                            TTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAG                                                                   <  SRR4302540.8874515/94‑1 (MQ=60)
                             TATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGT                                                                  <  SRR4302540.9673404/94‑1 (MQ=60)
                             TATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGT                                                                  <  SRR4302540.984331/94‑1 (MQ=60)
                             TATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGT                                                                  >  SRR4302540.10040605/1‑94 (MQ=60)
                                 AGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTT                                                              <  SRR4302540.1956944/94‑1 (MQ=60)
                                 AGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTT                                                              >  SRR4302540.2158764/1‑94 (MQ=60)
                                   CATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTT                                                            <  SRR4302540.8213265/94‑1 (MQ=60)
                                    ATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCCCTGATCTCTTACGATCAGGGAAGGGGTTTTT                                                           >  SRR4302540.8271164/1‑94 (MQ=60)
                                    ATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTT                                                           >  SRR4302540.8271166/1‑94 (MQ=60)
                                    ATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTT                                                           >  SRR4302540.759080/1‑94 (MQ=60)
                                    ATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTA                                                           >  SRR4302540.3729266/1‑94 (MQ=60)
                                    ATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTA                                                           <  SRR4302540.1541923/94‑1 (MQ=60)
                                     TCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTAT                                                          >  SRR4302540.7839946/1‑94 (MQ=60)
                                      CAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATT                                                         >  SRR4302540.5646390/1‑94 (MQ=60)
                                       AAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTA                                                        <  SRR4302540.7418148/94‑1 (MQ=60)
                                        AAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAA                                                       >  SRR4302540.120905/1‑94 (MQ=60)
                                        AAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAA                                                       <  SRR4302540.9951361/94‑1 (MQ=60)
                                         AAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAA                                                      >  SRR4302540.6884999/1‑94 (MQ=60)
                                           AGTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAA                                                    <  SRR4302540.3584149/94‑1 (MQ=60)
                                            TTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAAT                                                   <  SRR4302540.1148819/94‑1 (MQ=60)
                                            TTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAAT                                                   <  SRR4302540.2870014/94‑1 (MQ=60)
                                             TCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATA                                                  <  SRR4302540.1002425/94‑1 (MQ=60)
                                              CGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATAT                                                 <  SRR4302540.9343016/94‑1 (MQ=60)
                                              CGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATAT                                                 <  SRR4302540.5543644/94‑1 (MQ=60)
                                               GATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATG                                                >  SRR4302540.2670352/1‑94 (MQ=60)
                                               GATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATG                                                >  SRR4302540.4611443/1‑94 (MQ=60)
                                               GATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATG                                                >  SRR4302540.8740934/1‑94 (MQ=60)
                                                 TCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTCCGATCAGGAAAGTGGTTTTATTAAAAATATGGC                                              <  SRR4302540.9477918/94‑1 (MQ=60)
                                                  CGCGGAAATGAAAGATGCCGAAGTTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCG                                             >  SRR4302540.9376294/1‑94 (MQ=60)
                                                    CGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGAT                                           <  SRR4302540.3843772/94‑1 (MQ=60)
                                                    CGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGAT                                           <  SRR4302540.8722639/94‑1 (MQ=60)
                                                     GGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATT                                          <  SRR4302540.10155563/94‑1 (MQ=60)
                                                     GGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATT                                          <  SRR4302540.5832606/94‑1 (MQ=60)
                                                      GAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTA                                         <  SRR4302540.1361751/94‑1 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        >  SRR4302540.8956266/1‑94 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        <  SRR4302540.10100678/94‑1 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        >  SRR4302540.638695/1‑94 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        <  SRR4302540.908031/94‑1 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        >  SRR4302540.6948310/1‑94 (MQ=60)
                                                       AAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTAT                                        >  SRR4302540.5805502/1‑94 (MQ=60)
                                                        AATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATT                                       >  SRR4302540.2929007/1‑94 (MQ=60)
                                                         ATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTG                                      <  SRR4302540.9328474/94‑1 (MQ=60)
                                                         ATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTG                                      <  SRR4302540.7879270/94‑1 (MQ=60)
                                                          TGAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGA                                     <  SRR4302540.2101080/94‑1 (MQ=60)
                                                           GAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAG                                    >  SRR4302540.3293143/1‑94 (MQ=60)
                                                           GAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAG                                    >  SRR4302540.7142450/1‑94 (MQ=60)
                                                           GAAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAG                                    <  SRR4302540.5168362/94‑1 (MQ=60)
                                                            AAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGT                                   >  SRR4302540.4282518/1‑94 (MQ=60)
                                                            AAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGT                                   >  SRR4302540.2370699/1‑94 (MQ=60)
                                                            AAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGT                                   >  SRR4302540.684978/1‑94 (MQ=60)
                                                            AAAGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGT                                   >  SRR4302540.858107/1‑94 (MQ=60)
                                                              AGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCT                                 <  SRR4302540.3420227/94‑1 (MQ=60)
                                                              AGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCT                                 >  SRR4302540.3259331/1‑94 (MQ=60)
                                                              AGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCT                                 <  SRR4302540.4202336/94‑1 (MQ=60)
                                                              AGATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCT                                 >  SRR4302540.1026420/1‑94 (MQ=60)
                                                               GATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTA                                >  SRR4302540.5196542/1‑94 (MQ=60)
                                                               GATGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTA                                >  SRR4302540.8190185/1‑94 (MQ=60)
                                                                 TGCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAAC                              <  SRR4302540.1442543/94‑1 (MQ=60)
                                                                  GCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACA                             >  SRR4302540.2356243/1‑94 (MQ=60)
                                                                  GCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACA                             >  SRR4302540.10104753/1‑94 (MQ=60)
                                                                  GCCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACA                             <  SRR4302540.5693195/94‑1 (MQ=60)
                                                                   CCGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAA                            <  SRR4302540.8218989/94‑1 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           >  SRR4302540.430252/1‑94 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           >  SRR4302540.4875925/1‑94 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           <  SRR4302540.7313414/94‑1 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           <  SRR4302540.7313413/94‑1 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           >  SRR4302540.430254/1‑94 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           >  SRR4302540.8425052/1‑94 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           <  SRR4302540.1446357/94‑1 (MQ=60)
                                                                    CGAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAAT                           >  SRR4302540.8295910/1‑94 (MQ=60)
                                                                     GAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATA                          <  SRR4302540.10053770/94‑1 (MQ=60)
                                                                     GAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATA                          <  SRR4302540.2781643/94‑1 (MQ=60)
                                                                     GAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATA                          <  SRR4302540.8636491/94‑1 (MQ=60)
                                                                     GAAATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATA                          >  SRR4302540.5799807/1‑94 (MQ=60)
                                                                       AATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAAT                        >  SRR4302540.2678816/1‑94 (MQ=60)
                                                                       AATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAAT                        >  SRR4302540.3417601/1‑94 (MQ=60)
                                                                        ATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATC                       >  SRR4302540.3033730/1‑94 (MQ=60)
                                                                        ATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATC                       <  SRR4302540.5907181/94‑1 (MQ=60)
                                                                        ATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATC                       <  SRR4302540.1562299/94‑1 (MQ=60)
                                                                        ATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATC                       >  SRR4302540.2389776/1‑94 (MQ=60)
                                                                        ATTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATC                       <  SRR4302540.342328/94‑1 (MQ=60)
                                                                         TTGAACTGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCA                      <  SRR4302540.8996764/94‑1 (MQ=60)
                                                                         TTGAACGGTCAAATAAATTGTTCTCACTTATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCG                      >  SRR4302540.1316030/1‑94 (MQ=60)
                                                                         TTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGGAAGGGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCA                      >  SRR4302540.1910842/1‑94 (MQ=60)
                                                                         TTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCA                      <  SRR4302540.4887686/94‑1 (MQ=60)
                                                                         TTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCA                      >  SRR4302540.1316031/1‑94 (MQ=60)
                                                                         TTGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCA                      <  SRR4302540.8533202/94‑1 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     >  SRR4302540.5391185/1‑94 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     <  SRR4302540.6284148/94‑1 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     >  SRR4302540.2979641/1‑94 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     >  SRR4302540.8349698/1‑94 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     <  SRR4302540.892347/94‑1 (MQ=60)
                                                                          TGAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAG                     >  SRR4302540.3362505/1‑94 (MQ=60)
                                                                           TAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGT                    <  SRR4302540.2144089/94‑1 (MQ=60)
                                                                           GAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGT                    >  SRR4302540.5255547/1‑94 (MQ=60)
                                                                           GAACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGT                    <  SRR4302540.648747/94‑1 (MQ=60)
                                                                            AACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTA                   <  SRR4302540.5715144/94‑1 (MQ=60)
                                                                             ACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTAT                  <  SRR4302540.6940116/94‑1 (MQ=60)
                                                                             ACGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGACTATTGAGTCTAACAATAATCAGTAT                  <  SRR4302540.5376342/94‑1 (MQ=60)
                                                                              CGGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATC                 >  SRR4302540.9439119/1‑94 (MQ=60)
                                                                               GGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCT                >  SRR4302540.1202089/1‑94 (MQ=60)
                                                                               GGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCT                <  SRR4302540.3725227/94‑1 (MQ=60)
                                                                               GGTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCT                <  SRR4302540.8872044/94‑1 (MQ=60)
                                                                                GTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTG               <  SRR4302540.1900606/94‑1 (MQ=60)
                                                                                GTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTG               <  SRR4302540.589918/94‑1 (MQ=60)
                                                                                GTCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTG               <  SRR4302540.3741708/94‑1 (MQ=60)
                                                                                 TCAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGG              <  SRR4302540.6400021/94‑1 (MQ=60)
                                                                                  CAAATAAATTGTTCTCACTGATCTCTTACGATCAGGCAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGC             >  SRR4302540.2943392/1‑94 (MQ=60)
                                                                                  CAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGC             <  SRR4302540.2334596/94‑1 (MQ=60)
                                                                                  CAAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGAGATTATTGAGTCTAACAATAATCAGTATCTGGC             >  SRR4302540.9831457/1‑94 (MQ=60)
                                                                                   AAATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCT            <  SRR4302540.5449945/94‑1 (MQ=60)
                                                                                    AATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTG           >  SRR4302540.5318651/1‑94 (MQ=60)
                                                                                    AATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTG           <  SRR4302540.6300380/94‑1 (MQ=60)
                                                                                     ATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGT          >  SRR4302540.3200893/1‑94 (MQ=60)
                                                                                     ATAAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGT          >  SRR4302540.2972526/1‑94 (MQ=60)
                                                                                       AAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGG        <  SRR4302540.4228083/94‑1 (MQ=60)
                                                                                       AAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGG        >  SRR4302540.9612385/1‑94 (MQ=60)
                                                                                       AAATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGG        <  SRR4302540.10155382/94‑1 (MQ=60)
                                                                                       AAATTGTTCTCACTGATCTCTTAAGTTCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGG        <  SRR4302540.4228081/94‑1 (MQ=60)
                                                                                        AATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGG       <  SRR4302540.8644916/94‑1 (MQ=60)
                                                                                        AATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGG       <  SRR4302540.6808489/94‑1 (MQ=60)
                                                                                         ATTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGG      <  SRR4302540.3840369/94‑1 (MQ=60)
                                                                                          TTGTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGA     >  SRR4302540.5595246/1‑94 (MQ=60)
                                                                                            GTTCTCACTGATCTCTTACGATCAGGAAATTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATC   >  SRR4302540.9367864/1‑94 (MQ=60)
                                                                                            GTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATC   >  SRR4302540.4417625/1‑94 (MQ=60)
                                                                                            GTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATC   <  SRR4302540.8625479/94‑1 (MQ=60)
                                                                                            GTTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATC   <  SRR4302540.2173004/94‑1 (MQ=60)
                                                                                             TTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCA  >  SRR4302540.2334958/1‑94 (MQ=60)
                                                                                             TTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCA  >  SRR4302540.3034485/1‑94 (MQ=60)
                                                                                             |                                                                                             
AAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCA  >  NC_000913/873210‑873396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑