Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,009,201 T→C S5S (AGT→AGC)  uup → putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,009,2010TC99.7% 1050.1 / ‑5.1 321S5S (AGT→AGC) uupputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (165/155);  total (165/156)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01

Only 100 of 337 total aligned reads displayed.

GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGT  >  NC_000913/1009112‑1009290
                                                                                         |                                                                                         
gCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATg                                                                                        <  2:7905064/93‑1 (MQ=255)
  tctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      >  1:1043614/1‑93 (MQ=255)
  tctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      <  1:7772760/93‑1 (MQ=255)
  cctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      <  2:5050664/92‑1 (MQ=255)
   ctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAgcatgcat                                                                                     <  2:915410/93‑1 (MQ=255)
    tcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGcatgcatg                                                                                    <  1:1597521/93‑1 (MQ=255)
    tcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATAAGcatgcatg                                                                                    >  2:4376986/1‑93 (MQ=255)
     cccAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatgg                                                                                   >  1:8425477/1‑93 (MQ=255)
        aGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgc                                                                                >  1:1257605/1‑93 (MQ=255)
         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               <  2:8313549/93‑1 (MQ=255)
         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:6674472/1‑93 (MQ=255)
         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:2896584/1‑93 (MQ=255)
         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               <  2:4113299/93‑1 (MQ=255)
           aTTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatg                                                                             <  2:7554312/93‑1 (MQ=255)
           aTTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatg                                                                             <  1:5838081/93‑1 (MQ=255)
            tttCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatgg                                                                            >  1:2251873/1‑93 (MQ=255)
            tttCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatgg                                                                            <  2:2276541/93‑1 (MQ=255)
             ttCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatggc                                                                           <  2:8333457/93‑1 (MQ=255)
              tCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatgtcgcatggcg                                                                          >  1:5709800/1‑92 (MQ=255)
              tCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCt                                                                          <  2:4427028/93‑1 (MQ=255)
              tCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCt                                                                          <  2:6065801/93‑1 (MQ=255)
               cGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTg                                                                         <  1:9912492/93‑1 (MQ=255)
               cGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTg                                                                         >  1:6174327/1‑93 (MQ=255)
                gCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGt                                                                        >  1:9968930/1‑93 (MQ=255)
                gCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGt                                                                        <  2:3545853/93‑1 (MQ=255)
                  ccGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCg                                                                      >  1:9587114/1‑93 (MQ=255)
                  ccGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCg                                                                      >  1:4707744/1‑93 (MQ=255)
                   cGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGt                                                                     <  1:5212164/93‑1 (MQ=255)
                   cGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGt                                                                     <  2:9332172/93‑1 (MQ=255)
                   cGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGt                                                                     >  1:3737533/1‑93 (MQ=255)
                    gTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGtt                                                                    >  2:152280/1‑93 (MQ=255)
                     tAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTc                                                                   >  1:3562954/1‑93 (MQ=255)
                     tAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTc                                                                   <  1:10047353/93‑1 (MQ=255)
                        ccGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGc                                                                <  1:360783/93‑1 (MQ=255)
                        ccGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGc                                                                <  1:9219747/93‑1 (MQ=255)
                          gCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGa                                                              >  2:7466660/1‑93 (MQ=255)
                           ccAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAc                                                             >  1:2361980/1‑93 (MQ=255)
                            cAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAcg                                                            >  1:4113358/1‑93 (MQ=255)
                               ctCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCCTGGCTGTCGTTCAGCGACgcgc                                                         >  2:3252813/2‑93 (MQ=255)
                               aTCCACAACTGCTGGCTGATTACTGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACgcgc                                                         <  2:5498483/93‑1 (MQ=255)
                               aTCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACgcgc                                                         >  2:1946664/1‑93 (MQ=255)
                                tCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgcc                                                        >  2:523722/1‑93 (MQ=255)
                                  cacaACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgccgc                                                      <  1:5641496/93‑1 (MQ=255)
                                   acaACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCt                                                     <  2:7732715/93‑1 (MQ=255)
                                    caACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCtt                                                    >  1:2162493/1‑93 (MQ=255)
                                     aaCTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTtc                                                   >  1:901880/1‑93 (MQ=255)
                                        tgctgGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCg                                                >  1:7331318/1‑93 (MQ=255)
                                         gctggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGa                                               >  1:6975051/1‑93 (MQ=255)
                                          ctggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGAt                                              <  1:9698822/93‑1 (MQ=255)
                                           tggctgGTTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATa                                             <  2:3069647/93‑1 (MQ=255)
                                           tggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATa                                             >  2:1777681/1‑93 (MQ=255)
                                              ctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACg                                          <  2:6852549/93‑1 (MQ=255)
                                               tgATTACCGCAGCCGGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGc                                         <  1:3018565/93‑1 (MQ=255)
                                                 aTTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAg                                       >  2:7049065/1‑93 (MQ=255)
                                                   tACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGaa                                     <  2:6511914/93‑1 (MQ=255)
                                                   tACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGaa                                     <  1:267021/93‑1 (MQ=255)
                                                      cGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTg                                  >  1:8653774/1‑93 (MQ=255)
                                                        cAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCa                                <  2:5848321/93‑1 (MQ=255)
                                                         aGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCat                               >  1:1987780/1‑93 (MQ=255)
                                                          gCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCata                              <  2:4789858/93‑1 (MQ=255)
                                                           ccTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCatat                             <  1:9454001/93‑1 (MQ=255)
                                                            cTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATc                            <  2:863292/93‑1 (MQ=255)
                                                            cTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATc                            <  2:6621749/93‑1 (MQ=255)
                                                            cTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATc                            >  1:1747202/1‑93 (MQ=255)
                                                             tGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCg                           >  1:3075999/1‑93 (MQ=255)
                                                             tGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCg                           >  1:4894215/1‑93 (MQ=255)
                                                             tGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCg                           >  1:2499815/1‑93 (MQ=255)
                                                               aaaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGaa                         <  2:2927884/93‑1 (MQ=255)
                                                               aaaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGaa                         <  1:8533056/93‑1 (MQ=255)
                                                                aaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAg                        >  2:9682936/1‑93 (MQ=255)
                                                                aaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAg                        >  2:107463/1‑93 (MQ=255)
                                                                 aGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGa                       >  2:3863475/1‑93 (MQ=255)
                                                                 aGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGa                       >  2:6973121/1‑93 (MQ=255)
                                                                  agAATAGTAATGTCATTAATCAGCATGGATGGCGCAAGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGAt                      <  1:1715422/92‑1 (MQ=255)
                                                                   gAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATa                     >  1:1698014/1‑93 (MQ=255)
                                                                   gAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATa                     >  1:4333328/1‑93 (MQ=255)
                                                                    aaTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaa                    <  2:9816735/93‑1 (MQ=255)
                                                                    aaTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaa                    >  1:3927789/1‑93 (MQ=255)
                                                                    aaTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaa                    <  2:9024985/93‑1 (MQ=255)
                                                                    aaTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaa                    <  1:8081130/93‑1 (MQ=255)
                                                                     aTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaac                   >  2:6334234/1‑93 (MQ=255)
                                                                     aTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaac                   <  2:7925335/93‑1 (MQ=255)
                                                                      tAGTAATGTCATTAATGAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacg                  >  2:9556271/1‑93 (MQ=255)
                                                                      tAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacg                  >  1:6074231/1‑93 (MQ=255)
                                                                      tAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaaca                  >  1:4056070/1‑92 (MQ=255)
                                                                         tAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaac               <  2:7252018/93‑1 (MQ=255)
                                                                         tAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaac               <  2:2630751/93‑1 (MQ=255)
                                                                         tAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaac               >  1:6481215/1‑93 (MQ=255)
                                                                         tAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaac               <  1:7638349/93‑1 (MQ=255)
                                                                           aTGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgt             >  2:4754090/1‑93 (MQ=255)
                                                                            tGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgtg            >  2:9372602/1‑93 (MQ=255)
                                                                            tGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgtg            <  2:4484191/93‑1 (MQ=255)
                                                                            agTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgtg            <  1:8568305/92‑1 (MQ=255)
                                                                             gTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAGCgtgt           <  1:747509/93‑1 (MQ=255)
                                                                              tCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGtt          <  1:3389227/93‑1 (MQ=255)
                                                                              tCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGtt          <  2:2072954/93‑1 (MQ=255)
                                                                              tCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGtt          >  2:3983103/1‑93 (MQ=255)
                                                                                aTTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTg        >  1:2029184/1‑93 (MQ=255)
                                                                                  tAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTc      <  1:8804791/93‑1 (MQ=255)
                                                                                      cAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCtggt  <  1:7943320/93‑1 (MQ=255)
                                                                                         |                                                                                         
GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGT  >  NC_000913/1009112‑1009290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGC  >  NC_000913/1009108‑1009294
                                                                                             |                                                                                             
AAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGC                                                                                               <  SRR4302540.7657749/94‑1 (MQ=60)
AAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGC                                                                                               >  SRR4302540.10125055/1‑94 (MQ=60)
AAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGC                                                                                               >  SRR4302540.5378432/1‑94 (MQ=60)
 ACCGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCA                                                                                              <  SRR4302540.764847/94‑1 (MQ=60)
  ACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCCCAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCAT                                                                                             <  SRR4302540.2549561/94‑1 (MQ=60)
  ACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCAT                                                                                             <  SRR4302540.1721896/94‑1 (MQ=60)
  ACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCAT                                                                                             <  SRR4302540.4757410/94‑1 (MQ=60)
  ACGCGCTGCCAGTATTTCGCCCGTAACCGTCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGCATAGTAATGTCATTAATCAGCAT                                                                                             <  SRR4302540.4792253/94‑1 (MQ=60)
    GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGC                                                                                           >  SRR4302540.4814043/1‑94 (MQ=60)
    GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGC                                                                                           >  SRR4302540.9354390/1‑94 (MQ=60)
    GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGC                                                                                           <  SRR4302540.4738533/94‑1 (MQ=60)
     CTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCA                                                                                          >  SRR4302540.1054220/1‑94 (MQ=60)
     CTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCA                                                                                          >  SRR4302540.1714239/1‑94 (MQ=60)
     CTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCA                                                                                          <  SRR4302540.2961662/94‑1 (MQ=60)
      TCTCCCAGGATTTCGCCCGTAGCCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCAT                                                                                         <  SRR4302540.3636165/94‑1 (MQ=60)
      TCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCAT                                                                                         <  SRR4302540.1537276/94‑1 (MQ=60)
      TCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCAT                                                                                         >  SRR4302540.9903819/1‑94 (MQ=60)
      TCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCAT                                                                                         <  SRR4302540.7863624/94‑1 (MQ=60)
      CCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCAT                                                                                         <  SRR4302540.6101314/94‑1 (MQ=60)
       CTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATG                                                                                        >  SRR4302540.3967623/1‑94 (MQ=60)
       CTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATG                                                                                        >  SRR4302540.1657923/1‑94 (MQ=60)
       CTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATG                                                                                        <  SRR4302540.10074343/94‑1 (MQ=60)
        TCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGG                                                                                       <  SRR4302540.1614981/94‑1 (MQ=60)
        TCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGG                                                                                       >  SRR4302540.8523280/1‑94 (MQ=60)
        TCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGCAATGTCATTAATCAGCATGCATGG                                                                                       >  SRR4302540.1517014/1‑94 (MQ=60)
         CCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGC                                                                                      <  SRR4302540.4189455/94‑1 (MQ=60)
         CCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGC                                                                                      <  SRR4302540.10059480/94‑1 (MQ=60)
         CCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGC                                                                                      <  SRR4302540.8874014/94‑1 (MQ=60)
         CCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGC                                                                                      >  SRR4302540.5364270/1‑94 (MQ=60)
          CCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCG                                                                                     <  SRR4302540.7569477/94‑1 (MQ=60)
          CCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCG                                                                                     >  SRR4302540.5747732/1‑94 (MQ=60)
          CCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCG                                                                                     >  SRR4302540.2012243/1‑94 (MQ=60)
          CCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCG                                                                                     >  SRR4302540.5747733/1‑94 (MQ=60)
           CAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGC                                                                                    >  SRR4302540.1270498/1‑94 (MQ=60)
            AGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCA                                                                                   <  SRR4302540.4352852/94‑1 (MQ=60)
            AGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCA                                                                                   >  SRR4302540.2959844/1‑94 (MQ=60)
            AGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCA                                                                                   >  SRR4302540.2928170/1‑94 (MQ=60)
            AGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCA                                                                                   >  SRR4302540.6748212/1‑94 (MQ=60)
               ATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGG                                                                                <  SRR4302540.5902637/94‑1 (MQ=60)
               ATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGG                                                                                >  SRR4302540.2276045/1‑94 (MQ=60)
                TTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGC                                                                               >  SRR4302540.3092664/1‑94 (MQ=60)
                 TTCGCCCGTAACCGCCAGATCCACAACTGTTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCT                                                                              <  SRR4302540.8573595/94‑1 (MQ=60)
                 TTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGTCGCATGGCG                                                                              >  SRR4302540.5772653/1‑94 (MQ=60)
                 TTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCT                                                                              <  SRR4302540.6745774/94‑1 (MQ=60)
                 TTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCT                                                                              >  SRR4302540.5772654/1‑94 (MQ=60)
                  TCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTG                                                                             >  SRR4302540.6243120/1‑94 (MQ=60)
                   CGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGT                                                                            <  SRR4302540.10028267/94‑1 (MQ=60)
                   CGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGT                                                                            >  SRR4302540.10085228/1‑94 (MQ=60)
                   CGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGT                                                                            >  SRR4302540.5847626/1‑94 (MQ=60)
                    GCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTC                                                                           <  SRR4302540.9198810/94‑1 (MQ=60)
                    GCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTC                                                                           >  SRR4302540.3617773/1‑94 (MQ=60)
                     CCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCG                                                                          >  SRR4302540.9700290/1‑94 (MQ=60)
                     CCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCG                                                                          >  SRR4302540.4758058/1‑94 (MQ=60)
                     CCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCG                                                                          >  SRR4302540.9700289/1‑94 (MQ=60)
                      CCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGT                                                                         >  SRR4302540.3778309/1‑94 (MQ=60)
                       CGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTT                                                                        >  SRR4302540.3534641/1‑94 (MQ=60)
                       CGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTT                                                                        <  SRR4302540.5268958/94‑1 (MQ=60)
                        GTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTC                                                                       >  SRR4302540.3601875/1‑94 (MQ=60)
                        GTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTC                                                                       <  SRR4302540.3706134/94‑1 (MQ=60)
                        GTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTC                                                                       <  SRR4302540.970559/94‑1 (MQ=60)
                         gagCCGCCAGATCCACAACTGCTGGCTGATTACCGCAGGCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCA                                                                      <  SRR4302540.797200/91‑1 (MQ=60)
                         TAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCA                                                                      <  SRR4302540.10164148/94‑1 (MQ=60)
                          AACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAG                                                                     >  SRR4302540.7363001/1‑94 (MQ=60)
                           ACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGC                                                                    >  SRR4302540.7344212/1‑94 (MQ=60)
                           ACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCCGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGC                                                                    <  SRR4302540.6602647/94‑1 (MQ=60)
                            CCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCG                                                                   <  SRR4302540.364489/94‑1 (MQ=60)
                            CCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCG                                                                   <  SRR4302540.3464869/94‑1 (MQ=60)
                            CCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCG                                                                   <  SRR4302540.9330330/94‑1 (MQ=60)
                            CCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCG                                                                   <  SRR4302540.6466028/94‑1 (MQ=60)
                            CCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCG                                                                   <  SRR4302540.6912409/94‑1 (MQ=60)
                             CGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGA                                                                  >  SRR4302540.2020043/1‑94 (MQ=60)
                              GCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAC                                                                 >  SRR4302540.900401/1‑94 (MQ=60)
                              GCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAC                                                                 >  SRR4302540.2387422/1‑94 (MQ=60)
                              GCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAC                                                                 <  SRR4302540.8428020/94‑1 (MQ=60)
                               CCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACG                                                                >  SRR4302540.8662078/1‑94 (MQ=60)
                               CCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACG                                                                >  SRR4302540.9543159/1‑94 (MQ=60)
                               CCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACG                                                                >  SRR4302540.4157769/1‑94 (MQ=60)
                               CCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGCAATGTCATTAATCAGCATCCATGGAGCATGGCTGTCGTTCAGCGACG                                                                >  SRR4302540.4157767/1‑94 (MQ=60)
                                CAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGC                                                               >  SRR4302540.9843522/1‑94 (MQ=60)
                                 AGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCG                                                              >  SRR4302540.3123685/1‑94 (MQ=60)
                                 AGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCG                                                              >  SRR4302540.235977/1‑94 (MQ=60)
                                  GATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGC                                                             >  SRR4302540.2112416/1‑94 (MQ=60)
                                   ATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCC                                                            <  SRR4302540.2342547/94‑1 (MQ=60)
                                   ATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCC                                                            >  SRR4302540.2354826/1‑94 (MQ=60)
                                     CCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGC                                                          >  SRR4302540.3084731/1‑94 (MQ=60)
                                      CACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCT                                                         <  SRR4302540.5703588/94‑1 (MQ=60)
                                       ACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTT                                                        >  SRR4302540.2185787/1‑94 (MQ=60)
                                        CAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTC                                                       >  SRR4302540.911460/1‑94 (MQ=60)
                                         AACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCT                                                      <  SRR4302540.4011537/94‑1 (MQ=60)
                                         AACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCT                                                      <  SRR4302540.3971366/94‑1 (MQ=60)
                                          ACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTC                                                     <  SRR4302540.8702203/94‑1 (MQ=60)
                                           CTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCG                                                    >  SRR4302540.7413161/1‑94 (MQ=60)
                                           CTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCG                                                    <  SRR4302540.2639094/94‑1 (MQ=60)
                                           CTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCG                                                    >  SRR4302540.9842211/1‑94 (MQ=60)
                                           CTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCG                                                    <  SRR4302540.2180016/94‑1 (MQ=60)
                                           CTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCG                                                    <  SRR4302540.5805680/94‑1 (MQ=60)
                                            TGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGA                                                   <  SRR4302540.7846926/94‑1 (MQ=60)
                                            TGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGA                                                   >  SRR4302540.7052560/1‑94 (MQ=60)
                                             GCTGGCTGATTTCCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGAT                                                  <  SRR4302540.9806898/94‑1 (MQ=60)
                                             GCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGAT                                                  <  SRR4302540.1762662/94‑1 (MQ=60)
                                              CTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATA                                                 <  SRR4302540.9812853/94‑1 (MQ=60)
                                                GGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAC                                               <  SRR4302540.5064641/94‑1 (MQ=60)
                                                GGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAC                                               >  SRR4302540.6974778/1‑94 (MQ=60)
                                                GGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAC                                               <  SRR4302540.6179844/94‑1 (MQ=60)
                                                GGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAC                                               <  SRR4302540.3837159/94‑1 (MQ=60)
                                                GGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAC                                               <  SRR4302540.4693909/94‑1 (MQ=60)
                                                 GCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACG                                              <  SRR4302540.2711303/94‑1 (MQ=60)
                                                 GCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACG                                              <  SRR4302540.6157037/94‑1 (MQ=60)
                                                  CTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGC                                             >  SRR4302540.6396293/1‑94 (MQ=60)
                                                   TGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCA                                            >  SRR4302540.599387/1‑94 (MQ=60)
                                                   TGATTACCGCAGCCGGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCA                                            <  SRR4302540.3051744/94‑1 (MQ=60)
                                                    GATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAG                                           >  SRR4302540.4094019/1‑94 (MQ=60)
                                                     ATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGA                                          <  SRR4302540.1027688/94‑1 (MQ=60)
                                                     ATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGA                                          >  SRR4302540.1546770/1‑94 (MQ=60)
                                                      TTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAA                                         <  SRR4302540.1824243/94‑1 (MQ=60)
                                                       TACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAAC                                        <  SRR4302540.269653/94‑1 (MQ=60)
                                                       TACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAAC                                        <  SRR4302540.269652/94‑1 (MQ=60)
                                                        ACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACT                                       <  SRR4302540.7233516/94‑1 (MQ=60)
                                                        ACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACT                                       <  SRR4302540.10089301/94‑1 (MQ=60)
                                                         CCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTG                                      >  SRR4302540.8754302/1‑94 (MQ=60)
                                                         CCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTG                                      <  SRR4302540.3626910/94‑1 (MQ=60)
                                                         CCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTG                                      >  SRR4302540.6355873/1‑94 (MQ=60)
                                                           GCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCA                                    >  SRR4302540.8645703/1‑94 (MQ=60)
                                                            CAGCCTGAAAGGAGTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCAT                                   <  SRR4302540.1031091/94‑1 (MQ=60)
                                                            CAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCAT                                   >  SRR4302540.2009325/1‑94 (MQ=60)
                                                            CAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCAT                                   >  SRR4302540.8635401/1‑94 (MQ=60)
                                                             AGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATA                                  <  SRR4302540.3237985/94‑1 (MQ=60)
                                                             AGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATA                                  <  SRR4302540.4861806/94‑1 (MQ=60)
                                                             AGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATA                                  >  SRR4302540.5410072/1‑94 (MQ=60)
                                                              GCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATAT                                 <  SRR4302540.9143466/94‑1 (MQ=60)
                                                              GCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATAT                                 >  SRR4302540.4121428/1‑94 (MQ=60)
                                                               CCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATC                                <  SRR4302540.8532161/94‑1 (MQ=60)
                                                               CCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATC                                <  SRR4302540.9566209/94‑1 (MQ=60)
                                                               CCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATC                                >  SRR4302540.1766121/1‑94 (MQ=60)
                                                                CTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCG                               >  SRR4302540.4946848/1‑94 (MQ=60)
                                                                CTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCG                               >  SRR4302540.1217772/1‑94 (MQ=60)
                                                                CTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCG                               >  SRR4302540.2526781/1‑94 (MQ=60)
                                                                CTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCG                               >  SRR4302540.3109747/1‑94 (MQ=60)
                                                                CTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCG                               >  SRR4302540.2186762/1‑94 (MQ=60)
                                                                 TGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGA                              >  SRR4302540.2193321/1‑94 (MQ=60)
                                                                 TGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGA                              >  SRR4302540.7843865/1‑94 (MQ=60)
                                                                  GAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAA                             >  SRR4302540.2053293/1‑94 (MQ=60)
                                                                   AAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAG                            <  SRR4302540.8632197/94‑1 (MQ=60)
                                                                    AAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGA                           >  SRR4302540.2691220/1‑94 (MQ=60)
                                                                    AAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGA                           >  SRR4302540.8839541/1‑94 (MQ=60)
                                                                    AAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGA                           <  SRR4302540.8164619/94‑1 (MQ=60)
                                                                     AGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGAT                          >  SRR4302540.8724215/1‑94 (MQ=60)
                                                                     AGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGAT                          >  SRR4302540.8125013/1‑94 (MQ=60)
                                                                      GGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         >  SRR4302540.4380499/1‑94 (MQ=60)
                                                                      GGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         >  SRR4302540.1716411/1‑94 (MQ=60)
                                                                      GGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         >  SRR4302540.2419297/1‑94 (MQ=60)
                                                                      GGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         >  SRR4302540.1716410/1‑94 (MQ=60)
                                                                      GGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         >  SRR4302540.1716412/1‑94 (MQ=60)
                                                                      AGAATAGTAATGTCATTAATCAGCATGGATGGCGCAAGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATA                         <  SRR4302540.1733949/94‑1 (MQ=60)
                                                                       GAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAA                        <  SRR4302540.7501445/94‑1 (MQ=60)
                                                                       GAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAA                        >  SRR4302540.4416004/1‑94 (MQ=60)
                                                                       GAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAA                        >  SRR4302540.3970278/1‑94 (MQ=60)
                                                                       GAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAA                        <  SRR4302540.5501563/94‑1 (MQ=60)
                                                                        AATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAAC                       <  SRR4302540.8174926/94‑1 (MQ=60)
                                                                         ATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACG                      <  SRR4302540.3224076/94‑1 (MQ=60)
                                                                         ATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACG                      <  SRR4302540.9331088/94‑1 (MQ=60)
                                                                         ATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACG                      >  SRR4302540.6141777/1‑94 (MQ=60)
                                                                         ATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACA                      >  SRR4302540.4099799/1‑94 (MQ=60)
                                                                          TAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGA                     >  SRR4302540.2502336/1‑94 (MQ=60)
                                                                          AAGTAATGTTATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGA                     <  SRR4302540.7930689/94‑1 (MQ=60)
                                                                           AGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCCTATCGAAGATAACGAC                    >  SRR4302540.1758171/1‑94 (MQ=60)
                                                                           AGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAA                    >  SRR4302540.9572968/1‑94 (MQ=60)
                                                                           AGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAA                    <  SRR4302540.2754428/94‑1 (MQ=60)
                                                                           AGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAA                    >  SRR4302540.1758172/1‑94 (MQ=60)
                                                                            GTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAAC                   >  SRR4302540.6553313/1‑94 (MQ=60)
                                                                             TAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACG                  <  SRR4302540.7589791/94‑1 (MQ=60)
                                                                             TAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACG                  <  SRR4302540.9916609/94‑1 (MQ=60)
                                                                             TAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACG                  <  SRR4302540.7724299/94‑1 (MQ=60)
                                                                              AATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGT                 >  SRR4302540.7634330/1‑94 (MQ=60)
                                                                                AGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGT               <  SRR4302540.8667820/94‑1 (MQ=60)
                                                                                 GTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAGCGTGTT              <  SRR4302540.755474/94‑1 (MQ=60)
                                                                                 GTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTT              >  SRR4302540.5078197/1‑94 (MQ=60)
                                                                                  TCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTT             >  SRR4302540.1236474/1‑94 (MQ=60)
                                                                                  TCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTT             <  SRR4302540.3426206/94‑1 (MQ=60)
                                                                                   TATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTG            <  SRR4302540.7534704/94‑1 (MQ=60)
                                                                                   CATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTG            >  SRR4302540.1935226/1‑94 (MQ=60)
                                                                                   CATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTG            >  SRR4302540.2051090/1‑94 (MQ=60)
                                                                                    ATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGT           >  SRR4302540.8255386/1‑94 (MQ=60)
                                                                                      TAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCT         <  SRR4302540.8906572/94‑1 (MQ=60)
                                                                                       AATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTG        >  SRR4302540.8757704/1‑94 (MQ=60)
                                                                                       AATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTG        >  SRR4302540.9108421/1‑94 (MQ=60)
                                                                                        ATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGG       >  SRR4302540.8124717/1‑94 (MQ=60)
                                                                                        ATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGG       >  SRR4302540.3722301/1‑94 (MQ=60)
                                                                                          CAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTG     <  SRR4302540.8035905/94‑1 (MQ=60)
                                                                                          CAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTG     >  SRR4302540.7224338/1‑94 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    <  SRR4302540.9224775/94‑1 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    <  SRR4302540.1732582/94‑1 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    <  SRR4302540.5522925/94‑1 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    <  SRR4302540.3401663/94‑1 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    >  SRR4302540.7115403/1‑94 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGAGTTTGTCTGGTGG    >  SRR4302540.5443281/1‑94 (MQ=60)
                                                                                           AGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTCCATATCGAAGATAACGAACGTGTTTGTCTGGTGG    <  SRR4302540.1150674/94‑1 (MQ=60)
                                                                                            GCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGG   >  SRR4302540.944648/1‑94 (MQ=60)
                                                                                            GCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGG   >  SRR4302540.8203176/1‑94 (MQ=60)
                                                                                             CATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGC  >  SRR4302540.9005119/1‑94 (MQ=60)
                                                                                             |                                                                                             
AAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGC  >  NC_000913/1009108‑1009294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑