Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,050,477 A→G intergenic (‑79/‑207) cspH ← / → cspG cold shock‑like protein/CspG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,050,4770AG100.0% 1096.1 / NA 341intergenic (‑79/‑207)cspH/cspGcold shock‑like protein/CspG
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (170/171);  total (170/171)

Only 100 of 356 total aligned reads displayed.

TTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGACGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACT  >  NC_000913/1050387‑1050566
                                                                                          |                                                                                         
  tACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGggcggc                                                                                       <  2:1860724/93‑1 (MQ=255)
  tACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGggcggc                                                                                       >  2:6002173/1‑93 (MQ=255)
  tACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGggcggc                                                                                       >  2:5278470/1‑93 (MQ=255)
  tACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGACAGCGATATTTAAGACCGCCGggcggc                                                                                       >  1:5702659/1‑93 (MQ=255)
    cGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCta                                                                                     <  1:8383101/93‑1 (MQ=255)
       gACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaa                                                                                  <  2:1562197/93‑1 (MQ=255)
       gACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaa                                                                                  <  1:1726036/93‑1 (MQ=255)
         caaacaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaata                                                                                >  1:5086302/1‑93 (MQ=255)
         caaacaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaata                                                                                <  2:2273203/93‑1 (MQ=255)
         caaacaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaata                                                                                <  1:53466/93‑1 (MQ=255)
         caaacaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaata                                                                                >  1:1184246/1‑93 (MQ=255)
           aacaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaataaa                                                                              <  1:9257845/93‑1 (MQ=255)
            acaaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCtaaaataaaa                                                                             >  1:5507963/1‑93 (MQ=255)
              aaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAAtt                                                                           >  2:4101576/1‑93 (MQ=255)
              aaaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAAtt                                                                           <  2:2181829/93‑1 (MQ=255)
               aaTTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAAttt                                                                          >  2:8257975/1‑93 (MQ=255)
                 ttCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGc                                                                        <  1:3467661/93‑1 (MQ=255)
                    cTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTa                                                                     >  1:4710388/1‑93 (MQ=255)
                    cTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTa                                                                     >  1:6710154/1‑93 (MQ=255)
                    cTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTa                                                                     <  1:10012443/93‑1 (MQ=255)
                    cTTACTGAAAATACTGCGCTGCACTATACGGGGGTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTa                                                                     >  2:8181799/1‑93 (MQ=255)
                     ttACTGAAAATACTGCGCTTCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTCAGACCGCCGGGCGGCTAAAATAAAATTTGCTTaa                                                                    >  1:1909363/1‑93 (MQ=255)
                     ttACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTaa                                                                    <  1:1081638/93‑1 (MQ=255)
                      tACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAt                                                                   >  1:80702/1‑93 (MQ=255)
                      tACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAt                                                                   <  2:319369/93‑1 (MQ=255)
                      tACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAt                                                                   <  2:3476285/93‑1 (MQ=255)
                      tACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAt                                                                   <  2:5615400/93‑1 (MQ=255)
                       aCTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAtc                                                                  <  1:2719289/93‑1 (MQ=255)
                       aCTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAtc                                                                  >  1:5934338/1‑93 (MQ=255)
                        cTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAtct                                                                 >  1:3586406/1‑93 (MQ=255)
                        cTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAtct                                                                 <  1:8185696/93‑1 (MQ=255)
                         tGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAtctc                                                                >  1:7350851/1‑93 (MQ=255)
                          gAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAACATTTGCTTAATCTCa                                                               >  1:6186819/1‑93 (MQ=255)
                          gAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCa                                                               >  1:9531216/1‑93 (MQ=255)
                            aaaTACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAAt                                                             <  1:6550094/93‑1 (MQ=255)
                              aTACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTa                                                           <  2:6262310/93‑1 (MQ=255)
                              aTACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTa                                                           >  2:4269720/1‑93 (MQ=255)
                               tACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTAt                                                          >  2:480380/1‑93 (MQ=255)
                                aCTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATc                                                         <  2:5073357/93‑1 (MQ=255)
                                aCTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATc                                                         >  2:8345274/1‑93 (MQ=255)
                                 cTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCa                                                        <  1:1968392/93‑1 (MQ=255)
                                 cTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCa                                                        <  1:4018582/93‑1 (MQ=255)
                                 cTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCa                                                        >  2:708127/1‑93 (MQ=255)
                                  tGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAt                                                       >  2:2798812/1‑93 (MQ=255)
                                    cgcTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGc                                                     <  1:8511540/93‑1 (MQ=255)
                                     gcTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCg                                                    >  1:4384899/1‑93 (MQ=255)
                                      cTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGt                                                   <  1:7694753/93‑1 (MQ=255)
                                       tGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGtt                                                  >  2:8656191/1‑93 (MQ=255)
                                        gCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAACCTCAATTATCATGCGTTa                                                 <  2:1784141/93‑1 (MQ=255)
                                          aCTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAAt                                               <  1:6612362/93‑1 (MQ=255)
                                           cTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATa                                              <  1:9952025/93‑1 (MQ=255)
                                           cTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATa                                              <  1:7432269/93‑1 (MQ=255)
                                              taCGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCt                                           <  2:3718755/93‑1 (MQ=255)
                                              taCGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCt                                           >  1:61456/1‑93 (MQ=255)
                                               aCGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTg                                          >  2:3155171/1‑93 (MQ=255)
                                               aCGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGATg                                          <  1:9439343/93‑1 (MQ=255)
                                                cGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGc                                         <  1:5216808/93‑1 (MQ=255)
                                                  gggTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGt                                       >  1:7990892/1‑93 (MQ=255)
                                                   ggTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTc                                      >  2:9409521/1‑93 (MQ=255)
                                                     ttAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCgg                                    >  2:3329203/1‑93 (MQ=255)
                                                     ttAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCgg                                    >  2:2569299/1‑93 (MQ=255)
                                                      taataaAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGt                                   <  1:1611596/93‑1 (MQ=255)
                                                      taataaAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGt                                   >  1:8949239/1‑93 (MQ=255)
                                                       aataaaataaAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGtt                                  >  1:322809/1‑93 (MQ=255)
                                                       aataaaataaAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGtt                                  >  1:651260/1‑93 (MQ=255)
                                                        ataaaataaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGttt                                 <  1:3351294/93‑1 (MQ=255)
                                                         taaaataaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTg                                >  2:2624759/1‑93 (MQ=255)
                                                         taaaataaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTT‑ATTTCAATTAATCTGCGTTAATAGCTTCGTCGGgttta                               >  1:3056471/1‑91 (MQ=255)
                                                            aataaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGaaa                             <  1:3822528/93‑1 (MQ=255)
                                                             ataaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAag                            <  2:9289431/93‑1 (MQ=255)
                                                               aaaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagac                          <  2:12592/93‑1 (MQ=255)
                                                                aaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagaca                         <  1:5310439/93‑1 (MQ=255)
                                                                aaGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagaca                         <  2:5337640/93‑1 (MQ=255)
                                                                 aGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacag                        <  1:3121860/93‑1 (MQ=255)
                                                                 aGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacag                        <  1:7832389/93‑1 (MQ=255)
                                                                  gCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCCTGCGTTAATAGCTGCGTTGGTTTGAAagacaga                       >  1:6713984/1‑93 (MQ=255)
                                                                  gCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacaga                       >  2:9537571/1‑93 (MQ=255)
                                                                  gCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacaga                       <  2:1054642/93‑1 (MQ=255)
                                                                  gCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacaga                       <  1:7079560/93‑1 (MQ=255)
                                                                   ccAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAagacagac                      <  1:4215791/93‑1 (MQ=255)
                                                                    cAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAgacagaca                     <  2:6151326/93‑1 (MQ=255)
                                                                      gCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGc                   >  1:968131/1‑93 (MQ=255)
                                                                        gATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCAt                 <  2:142608/93‑1 (MQ=255)
                                                                         atatTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATa                >  1:9774996/1‑93 (MQ=255)
                                                                         atatTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATa                <  2:232337/93‑1 (MQ=255)
                                                                           atTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGGATACa              >  2:7609763/1‑93 (MQ=255)
                                                                            tttAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACaa             >  1:9325647/1‑93 (MQ=255)
                                                                            tttAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACaa             <  2:9018383/93‑1 (MQ=255)
                                                                             ttAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACaaa            <  2:3912094/93‑1 (MQ=255)
                                                                               aaGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAagt          <  2:7856981/93‑1 (MQ=255)
                                                                                aGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAagta         <  2:5802561/93‑1 (MQ=255)
                                                                                 gACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAagtag        >  2:8107677/1‑93 (MQ=255)
                                                                                 gACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAagtag        >  2:3583025/1‑93 (MQ=255)
                                                                                 gACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAagtag        >  1:3638899/1‑93 (MQ=255)
                                                                                   ccgccgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGtt      <  1:1484005/93‑1 (MQ=255)
                                                                                   ccaccgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGtt      <  1:8290177/90‑1 (MQ=255)
                                                                                    cgccgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGttt     <  1:2287135/93‑1 (MQ=255)
                                                                                     gccgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTa    <  1:4815734/93‑1 (MQ=255)
                                                                                      ccgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTAc   >  2:2073401/1‑93 (MQ=255)
                                                                                       cgGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACt  <  1:2113465/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGACGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACT  >  NC_000913/1050387‑1050566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.
CATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGACGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTAAAG  >  NC_000913/1050384‑1050570
                                                                                             |                                                                                             
CATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGG                                                                                               <  SRR4302540.5209114/94‑1 (MQ=60)
CATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGG                                                                                               <  SRR4302540.3630920/94‑1 (MQ=60)
 ATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGC                                                                                              >  SRR4302540.6378872/1‑94 (MQ=60)
 ATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGC                                                                                              >  SRR4302540.9496646/1‑94 (MQ=60)
 ATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGC                                                                                              <  SRR4302540.4090181/94‑1 (MQ=60)
 ATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGC                                                                                              >  SRR4302540.9118178/1‑94 (MQ=60)
   TTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGG                                                                                            >  SRR4302540.3132859/1‑94 (MQ=60)
    TTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGC                                                                                           >  SRR4302540.5765445/1‑94 (MQ=60)
    TTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGACAGCGATATTTAAGACCGCCGGGCGGC                                                                                           >  SRR4302540.5765446/1‑94 (MQ=60)
     TACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCT                                                                                          <  SRR4302540.3439129/94‑1 (MQ=60)
      ACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTA                                                                                         <  SRR4302540.1175428/94‑1 (MQ=60)
       CGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAA                                                                                        <  SRR4302540.8480371/94‑1 (MQ=60)
         GGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAA                                                                                      <  SRR4302540.8156981/94‑1 (MQ=60)
          GACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAAT                                                                                     <  SRR4302540.8216998/94‑1 (MQ=60)
          GACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAAT                                                                                     >  SRR4302540.7784218/1‑94 (MQ=60)
           ACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATA                                                                                    >  SRR4302540.5141289/1‑94 (MQ=60)
           ACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATA                                                                                    >  SRR4302540.1196469/1‑94 (MQ=60)
            CAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAA                                                                                   <  SRR4302540.53998/94‑1 (MQ=60)
            CAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAA                                                                                   >  SRR4302540.6789917/1‑94 (MQ=60)
            CAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAA                                                                                   >  SRR4302540.1234359/1‑94 (MQ=60)
             AAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAA                                                                                  >  SRR4302540.167041/1‑94 (MQ=60)
             AAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAA                                                                                  >  SRR4302540.3990044/1‑94 (MQ=60)
             AAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAA                                                                                  <  SRR4302540.873806/94‑1 (MQ=60)
              AACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAA                                                                                 >  SRR4302540.5568623/1‑94 (MQ=60)
              AACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAA                                                                                 <  SRR4302540.9368612/94‑1 (MQ=60)
              AACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAA                                                                                 >  SRR4302540.952023/1‑94 (MQ=60)
               ACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAAT                                                                                <  SRR4302540.5520267/94‑1 (MQ=60)
               ACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAAT                                                                                <  SRR4302540.2264191/94‑1 (MQ=60)
                CAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATT                                                                               >  SRR4302540.5273797/1‑94 (MQ=60)
                 AAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTT                                                                              >  SRR4302540.896414/1‑94 (MQ=60)
                 AAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTT                                                                              >  SRR4302540.5295337/1‑94 (MQ=60)
                 AAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTT                                                                              <  SRR4302540.926499/94‑1 (MQ=60)
                  AATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTG                                                                             >  SRR4302540.8574303/1‑94 (MQ=60)
                   ATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGC                                                                            <  SRR4302540.1162229/94‑1 (MQ=60)
                   ATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGC                                                                            >  SRR4302540.4336241/1‑94 (MQ=60)
                   ATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGC                                                                            >  SRR4302540.9428501/1‑94 (MQ=60)
                    TTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCT                                                                           <  SRR4302540.9900670/94‑1 (MQ=60)
                    TTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCT                                                                           <  SRR4302540.3505415/94‑1 (MQ=60)
                     TCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTT                                                                          <  SRR4302540.3084716/94‑1 (MQ=60)
                      CCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTA                                                                         >  SRR4302540.4760729/1‑94 (MQ=60)
                      CCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTA                                                                         >  SRR4302540.6784200/1‑94 (MQ=60)
                      CCTGACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTA                                                                         <  SRR4302540.2210584/94‑1 (MQ=60)
                       CTTACTGAAAATACTGCGCTTCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTCAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAA                                                                        >  SRR4302540.1930221/1‑94 (MQ=60)
                       CTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATGAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAA                                                                        >  SRR4302540.3086173/1‑94 (MQ=60)
                       CTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAA                                                                        <  SRR4302540.4632472/94‑1 (MQ=60)
                       CTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAA                                                                        <  SRR4302540.10129021/94‑1 (MQ=60)
                       CTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAA                                                                        <  SRR4302540.2392432/94‑1 (MQ=60)
                        TTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAT                                                                       >  SRR4302540.81546/1‑94 (MQ=60)
                        TTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAT                                                                       <  SRR4302540.5807580/94‑1 (MQ=60)
                        TTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAAT                                                                       <  SRR4302540.1092709/94‑1 (MQ=60)
                         TACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATC                                                                      >  SRR4302540.5999925/1‑94 (MQ=60)
                          ACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCT                                                                     >  SRR4302540.3625575/1‑94 (MQ=60)
                          ACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCT                                                                     <  SRR4302540.9489166/94‑1 (MQ=60)
                          ACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCT                                                                     <  SRR4302540.2298890/94‑1 (MQ=60)
                           CTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTC                                                                    >  SRR4302540.8386079/1‑94 (MQ=60)
                           CTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTC                                                                    >  SRR4302540.5846203/1‑94 (MQ=60)
                           CTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTC                                                                    <  SRR4302540.8280788/94‑1 (MQ=60)
                           CTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTC                                                                    >  SRR4302540.6702995/1‑94 (MQ=60)
                           CTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTC                                                                    >  SRR4302540.7432851/1‑94 (MQ=60)
                            TGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAACATTTGCTTAATCTCA                                                                   >  SRR4302540.6255716/1‑94 (MQ=60)
                            TGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCA                                                                   <  SRR4302540.5248077/94‑1 (MQ=60)
                            TGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCA                                                                   >  SRR4302540.9644052/1‑94 (MQ=60)
                             GAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAA                                                                  >  SRR4302540.10160646/1‑94 (MQ=60)
                             GAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAA                                                                  <  SRR4302540.1997228/94‑1 (MQ=60)
                               AAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATT                                                                <  SRR4302540.6221306/94‑1 (MQ=60)
                               AAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATT                                                                <  SRR4302540.1026525/94‑1 (MQ=60)
                               AAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATT                                                                <  SRR4302540.6622748/94‑1 (MQ=60)
                                AATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTA                                                               <  SRR4302540.3923586/94‑1 (MQ=60)
                                 ATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTAT                                                              <  SRR4302540.8155757/94‑1 (MQ=60)
                                 ATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTAT                                                              <  SRR4302540.3653284/94‑1 (MQ=60)
                                 ATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTAT                                                              <  SRR4302540.4988954/94‑1 (MQ=60)
                                  TACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATC                                                             <  SRR4302540.4063429/94‑1 (MQ=60)
                                  TACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATC                                                             >  SRR4302540.8530976/1‑94 (MQ=60)
                                   ACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATAA                                                            >  SRR4302540.3137285/1‑94 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           >  SRR4302540.7332202/1‑94 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           >  SRR4302540.8318106/1‑94 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           <  SRR4302540.1989767/94‑1 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           <  SRR4302540.6622732/94‑1 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           <  SRR4302540.337434/94‑1 (MQ=60)
                                    CTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCAT                                                           <  SRR4302540.4061873/94‑1 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        <  SRR4302540.1630492/94‑1 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        <  SRR4302540.6456666/94‑1 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        <  SRR4302540.8610458/94‑1 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        >  SRR4302540.4432506/1‑94 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        >  SRR4302540.1539520/1‑94 (MQ=60)
                                       CGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCG                                                        >  SRR4302540.1539521/1‑94 (MQ=60)
                                         CTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTT                                                      <  SRR4302540.7782392/94‑1 (MQ=60)
                                          TGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTA                                                     >  SRR4302540.4438322/1‑94 (MQ=60)
                                          TGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTA                                                     >  SRR4302540.3770848/1‑94 (MQ=60)
                                             ACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATA                                                  <  SRR4302540.6685582/94‑1 (MQ=60)
                                             ACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATA                                                  <  SRR4302540.2076703/94‑1 (MQ=60)
                                             ACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATA                                                  <  SRR4302540.3474330/94‑1 (MQ=60)
                                             ACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATA                                                  <  SRR4302540.8164188/94‑1 (MQ=60)
                                              CTTTACTGGGTCAATAAAATTAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAATATTTGCTTAATCTCAAGTATCATGCGTTAATAG                                                 >  SRR4302540.9100014/1‑94 (MQ=60)
                                              CTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAG                                                 >  SRR4302540.5158622/1‑94 (MQ=60)
                                              CTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAG                                                 >  SRR4302540.1961037/1‑94 (MQ=60)
                                              CTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAG                                                 <  SRR4302540.10068201/94‑1 (MQ=60)
                                              CTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAG                                                 <  SRR4302540.7515067/94‑1 (MQ=60)
                                                ATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCT                                               <  SRR4302540.5008524/94‑1 (MQ=60)
                                                ATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCT                                               >  SRR4302540.62078/1‑94 (MQ=60)
                                                ATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCT                                               >  SRR4302540.62077/1‑94 (MQ=60)
                                                 TACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGTCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTG                                              >  SRR4302540.6103231/1‑94 (MQ=60)
                                                 TACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTG                                              >  SRR4302540.8272311/1‑94 (MQ=60)
                                                 TACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTG                                              >  SRR4302540.6103230/1‑94 (MQ=60)
                                                 TACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTG                                              <  SRR4302540.276457/94‑1 (MQ=60)
                                                  ACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGATGC                                             <  SRR4302540.9551438/94‑1 (MQ=60)
                                                   CGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCG                                            <  SRR4302540.1824825/94‑1 (MQ=60)
                                                   CGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCG                                            <  SRR4302540.975876/94‑1 (MQ=60)
                                                   CGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCG                                            <  SRR4302540.3798477/94‑1 (MQ=60)
                                                    GGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGT                                           >  SRR4302540.4464074/1‑94 (MQ=60)
                                                    GGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGT                                           >  SRR4302540.8083924/1‑94 (MQ=60)
                                                    GGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGT                                           >  SRR4302540.9504801/1‑94 (MQ=60)
                                                     GGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTC                                          <  SRR4302540.8050716/94‑1 (MQ=60)
                                                     GGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTC                                          <  SRR4302540.5630931/94‑1 (MQ=60)
                                                       GTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGG                                        >  SRR4302540.7653517/1‑94 (MQ=60)
                                                       GTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGG                                        <  SRR4302540.6835198/94‑1 (MQ=60)
                                                        TTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGT                                       >  SRR4302540.5374008/1‑94 (MQ=60)
                                                        TTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGT                                       >  SRR4302540.9054644/1‑94 (MQ=60)
                                                        TTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGT                                       >  SRR4302540.5698388/1‑94 (MQ=60)
                                                         TAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTT                                      >  SRR4302540.658188/1‑94 (MQ=60)
                                                         TAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTT                                      >  SRR4302540.326037/1‑94 (MQ=60)
                                                         TAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTT                                      <  SRR4302540.1629248/94‑1 (MQ=60)
                                                          AATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTT                                     <  SRR4302540.3775823/94‑1 (MQ=60)
                                                           ATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAtttcaattaatctgcgttaatagcttcgtcgggttta                                    >  SRR4302540.3090004/1‑57 (MQ=60)
                                                           ATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTG                                    <  SRR4302540.2372125/94‑1 (MQ=60)
                                                           ATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTG                                    <  SRR4302540.3388031/94‑1 (MQ=60)
                                                           ATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTG                                    >  SRR4302540.1948835/1‑94 (MQ=60)
                                                           ATAAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTG                                    >  SRR4302540.4105158/1‑94 (MQ=60)
                                                             AAAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAA                                  >  SRR4302540.4319323/1‑94 (MQ=60)
                                                              AAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAA                                 >  SRR4302540.8442519/1‑94 (MQ=60)
                                                              AAATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAA                                 >  SRR4302540.1752107/1‑94 (MQ=60)
                                                               AATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAG                                <  SRR4302540.3424121/94‑1 (MQ=60)
                                                               AATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAG                                <  SRR4302540.3864131/94‑1 (MQ=60)
                                                               AATAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAG                                <  SRR4302540.1405663/94‑1 (MQ=60)
                                                                 TAAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGAC                              >  SRR4302540.6609910/1‑94 (MQ=60)
                                                                  AAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACA                             <  SRR4302540.6857160/94‑1 (MQ=60)
                                                                  AAAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACA                             <  SRR4302540.9631041/94‑1 (MQ=60)
                                                                   AAGCCAGCGATATTTAAGACCGCCGGGCGGCTAACATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAG                            >  SRR4302540.3628616/1‑94 (MQ=60)
                                                                   AAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAG                            <  SRR4302540.8414145/94‑1 (MQ=60)
                                                                   AAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAG                            <  SRR4302540.3211896/94‑1 (MQ=60)
                                                                   AAGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAG                            <  SRR4302540.5368564/94‑1 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCCTGCGTTAATAGCTGCGTTGGTTTGAAAGACAGA                           >  SRR4302540.6788063/1‑94 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           <  SRR4302540.3155970/94‑1 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           >  SRR4302540.8980094/1‑94 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           >  SRR4302540.6788062/1‑94 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           <  SRR4302540.9827752/94‑1 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           <  SRR4302540.9827751/94‑1 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           <  SRR4302540.7923903/94‑1 (MQ=60)
                                                                    AGCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCCCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGA                           >  SRR4302540.6635350/1‑94 (MQ=60)
                                                                     GCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGAC                          <  SRR4302540.2085297/94‑1 (MQ=60)
                                                                     GCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGAC                          <  SRR4302540.2263289/94‑1 (MQ=60)
                                                                     GCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGAC                          <  SRR4302540.7158353/94‑1 (MQ=60)
                                                                     GCCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGAC                          >  SRR4302540.6786596/1‑94 (MQ=60)
                                                                      CCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACA                         <  SRR4302540.6610652/94‑1 (MQ=60)
                                                                      CCAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACA                         >  SRR4302540.9635370/1‑94 (MQ=60)
                                                                       CAGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAG                        >  SRR4302540.3651842/1‑94 (MQ=60)
                                                                        AGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGC                       >  SRR4302540.978111/1‑94 (MQ=60)
                                                                        AGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGC                       >  SRR4302540.7475086/1‑94 (MQ=60)
                                                                        AGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGC                       >  SRR4302540.1510294/1‑94 (MQ=60)
                                                                        AGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGC                       >  SRR4302540.5101871/1‑94 (MQ=60)
                                                                        AGCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGC                       <  SRR4302540.774660/94‑1 (MQ=60)
                                                                         GCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCA                      <  SRR4302540.537159/94‑1 (MQ=60)
                                                                         GCGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCA                      <  SRR4302540.3208637/94‑1 (MQ=60)
                                                                          CGATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGCTAGTGGCTGCGTCGGTTTGAAAGACATACAGCAT                     >  SRR4302540.8680489/1‑94 (MQ=60)
                                                                           GATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATA                    >  SRR4302540.6638662/1‑94 (MQ=60)
                                                                           GATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATA                    >  SRR4302540.9889581/1‑94 (MQ=60)
                                                                            ATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATAC                   <  SRR4302540.5376201/94‑1 (MQ=60)
                                                                            ATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATAC                   <  SRR4302540.1806433/94‑1 (MQ=60)
                                                                            ATATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATAC                   >  SRR4302540.4232853/1‑94 (MQ=60)
                                                                              ATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAA                 >  SRR4302540.7926361/1‑94 (MQ=60)
                                                                              ATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAA                 <  SRR4302540.7510739/94‑1 (MQ=60)
                                                                              ATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAA                 >  SRR4302540.9436879/1‑94 (MQ=60)
                                                                              ATTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAA                 >  SRR4302540.651823/1‑94 (MQ=60)
                                                                               TTTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAA                >  SRR4302540.9283432/1‑94 (MQ=60)
                                                                                TTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAG               >  SRR4302540.9705884/1‑94 (MQ=60)
                                                                                TTAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAG               <  SRR4302540.1151413/94‑1 (MQ=60)
                                                                                 TAAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGT              <  SRR4302540.10003132/94‑1 (MQ=60)
                                                                                  AAGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTA             >  SRR4302540.7197154/1‑94 (MQ=60)
                                                                                   AGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAG            <  SRR4302540.5240853/94‑1 (MQ=60)
                                                                                   AGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAG            <  SRR4302540.6694772/94‑1 (MQ=60)
                                                                                   AGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAG            >  SRR4302540.7896298/1‑94 (MQ=60)
                                                                                   AGACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAG            >  SRR4302540.3678743/1‑94 (MQ=60)
                                                                                    GACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGT           >  SRR4302540.6354349/1‑94 (MQ=60)
                                                                                     ACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTT          <  SRR4302540.3285111/94‑1 (MQ=60)
                                                                                     ACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTT          >  SRR4302540.3231920/1‑94 (MQ=60)
                                                                                     ACCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTT          >  SRR4302540.5455071/1‑94 (MQ=60)
                                                                                      CCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTT         >  SRR4302540.3605778/1‑94 (MQ=60)
                                                                                      CCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTT         <  SRR4302540.8386776/94‑1 (MQ=60)
                                                                                      CCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTT         <  SRR4302540.1500300/94‑1 (MQ=60)
                                                                                      CCGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTT         <  SRR4302540.8013186/94‑1 (MQ=60)
                                                                                       CGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTA        <  SRR4302540.2311727/94‑1 (MQ=60)
                                                                                       CGCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTA        <  SRR4302540.9716104/94‑1 (MQ=60)
                                                                                        GCCGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTAC       <  SRR4302540.4867276/94‑1 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     >  SRR4302540.8103017/1‑94 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     >  SRR4302540.8160098/1‑94 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     <  SRR4302540.4839179/94‑1 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     <  SRR4302540.4839178/94‑1 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     <  SRR4302540.7489248/94‑1 (MQ=60)
                                                                                          CGGGCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTA     <  SRR4302540.2136150/94‑1 (MQ=60)
                                                                                             GCGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTAAAG  <  SRR4302540.9683823/94‑1 (MQ=60)
                                                                                             |                                                                                             
CATTTTACGGGACAAACAAATTCCTTACTGAAAATACTGCGCTGCACTATACGGGGTTAATAAAATAAAGCCAGCGATATTTAAGACCGCCGGACGGCTAAAATAAAATTTGCTTAATCTCAATTATCATGCGTTAATAGCTGCGTCGGTTTGAAAGACAGACAGCATACAAAGTAGTTTACTAAAG  >  NC_000913/1050384‑1050570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑