Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,086,713	A→G	R119R (CGT→CGC)	ycdQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,086,713	0	A	G	99.7%	1081.3 / ‑5.5	337	R119R (CGT→CGC)	ycdQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (152/183); total (153/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01

Only 100 of 341 total aligned reads displayed.

GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAA  >  NC_000913/1086623‑1086801

  ttttAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCggg                                                                                      >  1:8437031/1‑93 (MQ=255)

   tttAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGt                                                                                     <  1:4521395/93‑1 (MQ=255)

     tAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGttt                                                                                   <  2:8138326/93‑1 (MQ=255)

      aaGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGtttt                                                                                  <  2:8552563/93‑1 (MQ=255)

      aaGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGtttt                                                                                  <  2:6989781/93‑1 (MQ=255)

      aaGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGAATGGCGCGGGtttt                                                                                  <  1:3160379/93‑1 (MQ=255)

        gcgcAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTAt                                                                                >  2:9808118/1‑93 (MQ=255)

        acgcAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTAt                                                                                <  1:7977069/92‑1 (MQ=255)

         cgcAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATc                                                                               <  2:8996378/93‑1 (MQ=255)

          gcAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCt                                                                              >  2:6109608/1‑93 (MQ=255)

            aaTGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGt                                                                            <  2:818581/93‑1 (MQ=255)

             aTGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCGGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGtt                                                                           >  1:1478871/1‑93 (MQ=255)

             aTGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGtt                                                                           >  2:6227302/1‑93 (MQ=255)

              tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTg                                                                          >  1:1129317/1‑93 (MQ=255)

              tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTg                                                                          <  2:1882587/93‑1 (MQ=255)

              tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTg                                                                          <  1:1733929/93‑1 (MQ=255)

              tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGGTTTATCTGTTg                                                                          >  2:7248524/1‑93 (MQ=255)

               ggCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGa                                                                         >  1:6561474/1‑93 (MQ=255)

                 cTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAc                                                                       <  2:2904783/93‑1 (MQ=255)

                  tttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAcc                                                                      >  2:5159435/1‑93 (MQ=255)

                   ttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCg                                                                     >  2:2096055/1‑93 (MQ=255)

                   ttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCg                                                                     >  1:8655561/1‑93 (MQ=255)

                     ccccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTc                                                                   >  1:5861248/1‑93 (MQ=255)

                     ccccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTc                                                                   <  2:9619992/93‑1 (MQ=255)

                     ccccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGCAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTc                                                                   <  1:4670574/93‑1 (MQ=255)

                      cccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCa                                                                  >  1:4437691/1‑93 (MQ=255)

                       ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt                                                                 <  1:8038585/93‑1 (MQ=255)

                       ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt                                                                 <  1:3361276/93‑1 (MQ=255)

                       ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt                                                                 <  1:2351336/93‑1 (MQ=255)

                        cgggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAtt                                                                <  1:4251490/91‑1 (MQ=255)

                        cTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAtt                                                                >  2:2327093/1‑93 (MQ=255)

                        cTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAtt                                                                >  1:4874073/1‑93 (MQ=255)

                         tGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAttt                                                               >  1:1584373/1‑93 (MQ=255)

                          tgTTGTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATACAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa                                                              <  2:1307578/92‑1 (MQ=255)

                          ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa                                                              <  1:9730190/93‑1 (MQ=255)

                          ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa                                                              <  2:4427138/93‑1 (MQ=255)

                          ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa                                                              <  2:250513/93‑1 (MQ=255)

                          ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa                                                              <  2:2425979/93‑1 (MQ=255)

                           gTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTAc                                                             <  1:3782268/93‑1 (MQ=255)

                            ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg                                                            <  2:8726044/93‑1 (MQ=255)

                            ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg                                                            <  2:4953089/93‑1 (MQ=255)

                            ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg                                                            >  1:8994867/1‑93 (MQ=255)

                            ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg                                                            >  2:3821212/1‑93 (MQ=255)

                            ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg                                                            <  1:8529264/93‑1 (MQ=255)

                             tttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCGAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACgg                                                           <  2:9207170/93‑1 (MQ=255)

                              ttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGc                                                          <  1:6928593/93‑1 (MQ=255)

                               tGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCa                                                         <  1:1217641/93‑1 (MQ=255)

                                gcgcCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCaa                                                        <  1:782335/93‑1 (MQ=255)

                                gcgcCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCaa                                                        <  2:5472315/93‑1 (MQ=255)

                                  gcCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATa                                                      <  2:2228244/93‑1 (MQ=255)

                                   ccAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATaa                                                     <  2:504006/93‑1 (MQ=255)

                                     aGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACt                                                   >  2:7430970/1‑93 (MQ=255)

                                        tgaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCa                                                >  1:4357246/1‑93 (MQ=255)

                                        tgaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCa                                                <  1:3997729/93‑1 (MQ=255)

                                        tgaatgaCCCGCAAATGGGGAATTTGTGCAGACATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCa                                                >  1:5368489/1‑93 (MQ=255)

                                         gaatgaTCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa                                               <  2:7334751/93‑1 (MQ=255)

                                         gaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa                                               >  2:6026456/1‑93 (MQ=255)

                                         gaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa                                               <  1:9133797/93‑1 (MQ=255)

                                         gaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa                                               <  2:933263/93‑1 (MQ=255)

                                          aatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAAt                                              >  2:456274/1‑93 (MQ=255)

                                           atgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATg                                             <  1:2974387/93‑1 (MQ=255)

                                             gaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGtt                                           >  1:6857978/1‑93 (MQ=255)

                                              aCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCTCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtc                                          >  1:2591154/1‑93 (MQ=255)

                                               ctcGCAAATGGGTAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtct                                         <  2:5353967/91‑1 (MQ=255)

                                                ccGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtctc                                        >  2:6803714/1‑93 (MQ=255)

                                                 cGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCa                                       <  2:7677087/93‑1 (MQ=255)

                                                 cGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCa                                       <  1:3812339/93‑1 (MQ=255)

                                                  gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt                                      <  1:3669763/93‑1 (MQ=255)

                                                  gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt                                      <  1:9320154/93‑1 (MQ=255)

                                                  gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt                                      <  1:6152201/93‑1 (MQ=255)

                                                  gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt                                      >  1:8376064/1‑93 (MQ=255)

                                                  gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt                                      <  1:6314646/93‑1 (MQ=255)

                                                    aaaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATaa                                    <  1:1921175/93‑1 (MQ=255)

                                                    aaaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATaa                                    >  2:3908734/1‑93 (MQ=255)

                                                     agtGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAc                                   <  1:8250410/91‑1 (MQ=255)

                                                     aaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAc                                   <  1:4771965/93‑1 (MQ=255)

                                                       tGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGc                                 <  1:5489257/93‑1 (MQ=255)

                                                        ggggAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCt                                <  1:10000292/93‑1 (MQ=255)

                                                        ggggAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCt                                >  1:4223663/1‑93 (MQ=255)

                                                        ggggAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCt                                <  1:5226954/93‑1 (MQ=255)

                                                        ggggAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCt                                <  2:8462588/93‑1 (MQ=255)

                                                         gggAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCtg                               <  1:7179923/93‑1 (MQ=255)

                                                              tttGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTa                          >  2:1672589/1‑93 (MQ=255)

                                                               ttGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTaa                         <  1:2439278/93‑1 (MQ=255)

                                                                tgtgCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTaaa                        <  1:5627505/93‑1 (MQ=255)

                                                                 gtgCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAg                       <  2:5854633/93‑1 (MQ=255)

                                                                    cAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgcgg                    <  1:9651960/93‑1 (MQ=255)

                                                                          tGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTa              >  1:2191237/1‑93 (MQ=255)

                                                                          tGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTa              >  2:8839685/1‑93 (MQ=255)

                                                                           gCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAt             <  2:5672365/93‑1 (MQ=255)

                                                                           gCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAt             <  2:7895074/93‑1 (MQ=255)

                                                                            cGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATg            >  2:469055/1‑93 (MQ=255)

                                                                             gATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCATTGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATgg           <  2:3561111/93‑1 (MQ=255)

                                                                             gATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATgg           <  2:7500111/93‑1 (MQ=255)

                                                                              aTCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGt          <  1:9914874/93‑1 (MQ=255)

                                                                               tCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGtt         >  1:6010621/1‑93 (MQ=255)

                                                                               tCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGtt         <  2:6527076/93‑1 (MQ=255)

                                                                                  aGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTcc      >  2:8331036/1‑93 (MQ=255)

                                                                                    gATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGCGTATGGTGTCCTc    >  1:7283105/1‑93 (MQ=255)

                                                                                      tGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCaa  >  2:3336622/1‑93 (MQ=255)

GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAA  >  NC_000913/1086623‑1086801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT  >  NC_000913/1086620‑1086806

TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCG                                                                                                >  SRR4302540.8060183/1‑94 (MQ=60)

TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCG                                                                                                >  SRR4302540.7108240/1‑94 (MQ=60)

TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCG                                                                                                <  SRR4302540.5838622/94‑1 (MQ=60)

  CGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCG                                                                                              >  SRR4302540.5670761/1‑94 (MQ=60)

   GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGG                                                                                             >  SRR4302540.5052512/1‑94 (MQ=60)

    GTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGG                                                                                            >  SRR4302540.8534979/1‑94 (MQ=60)

    GTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGG                                                                                            >  SRR4302540.7474943/1‑94 (MQ=60)

      TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT                                                                                          <  SRR4302540.9937684/94‑1 (MQ=60)

      TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT                                                                                          >  SRR4302540.4523001/1‑94 (MQ=60)

      TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT                                                                                          <  SRR4302540.4570361/94‑1 (MQ=60)

      TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT                                                                                          <  SRR4302540.8082334/94‑1 (MQ=60)

       TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT                                                                                         <  SRR4302540.7915355/94‑1 (MQ=60)

        TAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTT                                                                                        >  SRR4302540.2277407/1‑94 (MQ=60)

         AAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTA                                                                                       <  SRR4302540.4826976/94‑1 (MQ=60)

         AAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGAATGGCGCGGGTTTTA                                                                                       <  SRR4302540.3194764/94‑1 (MQ=60)

          AGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTAT                                                                                      <  SRR4302540.6276068/94‑1 (MQ=60)

          AGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGGTTTAT                                                                                      >  SRR4302540.2304/1‑94 (MQ=60)

           ACGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC                                                                                     <  SRR4302540.8069997/94‑1 (MQ=60)

            CGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑T                                                                                   >  SRR4302540.1888147/1‑94 (MQ=60)

             GCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TG                                                                                  >  SRR4302540.485752/1‑94 (MQ=60)

             GCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TG                                                                                  <  SRR4302540.1739947/94‑1 (MQ=60)

             GCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TG                                                                                  >  SRR4302540.246656/1‑94 (MQ=60)

               NANNGNTNTNNCCTGGTTTTNNGNCNNATGAATGACCCGCAAATGGGGAATTTGTGCNGCCATNCGATCNAGGATGGCGCGGGTTTTATC‑TGTT                                                                                <  SRR4302540.9520601/94‑1 (MQ=60)

               AATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCGGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTT                                                                                >  SRR4302540.1495062/1‑94 (MQ=60)

                ATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTG                                                                               >  SRR4302540.8345091/1‑94 (MQ=60)

                ATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTG                                                                               <  SRR4302540.5359328/94‑1 (MQ=60)

                ATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTG                                                                               >  SRR4302540.1141067/1‑94 (MQ=60)

                 TGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGA                                                                              >  SRR4302540.6634209/1‑94 (MQ=60)

                 TGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGA                                                                              <  SRR4302540.1752644/94‑1 (MQ=60)

                  GGCTTTCCCCTGGTTTTGCTCCAGATGAATGACCCGCAGATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAA                                                                             <  SRR4302540.4728667/94‑1 (MQ=60)

                   GCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAAC                                                                            >  SRR4302540.1535630/1‑94 (MQ=60)

                    CTTTCCCCTGGTTTTGCGCCAGATGAATGGCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACC                                                                           <  SRR4302540.3734893/94‑1 (MQ=60)

                    CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACC                                                                           <  SRR4302540.2067634/94‑1 (MQ=60)

                     TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCG                                                                          >  SRR4302540.8756108/1‑94 (MQ=60)

                     TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCAAGGATGGCGCGGGTTTTATC‑TGTTGAACCG                                                                          <  SRR4302540.2535026/94‑1 (MQ=60)

                      TTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGT                                                                         >  SRR4302540.4777610/1‑94 (MQ=60)

                      TTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGT                                                                         <  SRR4302540.2418932/94‑1 (MQ=60)

                       TCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTC                                                                        >  SRR4302540.5926060/1‑94 (MQ=60)

                        CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCA                                                                       <  SRR4302540.5320907/94‑1 (MQ=60)

                        CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCA                                                                       >  SRR4302540.4485776/1‑94 (MQ=60)

                        CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCA                                                                       <  SRR4302540.4720559/94‑1 (MQ=60)

                        CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGCAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCA                                                                       <  SRR4302540.4720560/94‑1 (MQ=60)

                          CCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATT                                                                     <  SRR4302540.3398071/94‑1 (MQ=60)

                          CCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATT                                                                     <  SRR4302540.8132007/94‑1 (MQ=60)

                          CCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATT                                                                     >  SRR4302540.4926375/1‑94 (MQ=60)

                          CCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATT                                                                     <  SRR4302540.2376659/94‑1 (MQ=60)

                           CTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    >  SRR4302540.1601677/1‑94 (MQ=60)

                           CTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    <  SRR4302540.4297741/94‑1 (MQ=60)

                           CTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    >  SRR4302540.2043446/1‑94 (MQ=60)

                           CGGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    <  SRR4302540.4297742/94‑1 (MQ=60)

                           CGGGTGTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCAATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    <  SRR4302540.862317/94‑1 (MQ=60)

                           CCGGTTTTGCGGCAGATGAATGTCCCGCAAATGGGTAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTT                                                                    <  SRR4302540.7921311/94‑1 (MQ=60)

                            TGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTA                                                                   >  SRR4302540.10120340/1‑94 (MQ=60)

                            TGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTA                                                                   >  SRR4302540.3174039/1‑94 (MQ=60)

                            TGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTA                                                                   >  SRR4302540.5809822/1‑94 (MQ=60)

                            TGGTTTTGCGCCAGATGAAGGAGCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTA                                                                   <  SRR4302540.543841/94‑1 (MQ=60)

                             GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTAC                                                                  >  SRR4302540.5934990/1‑94 (MQ=60)

                             GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTAC                                                                  >  SRR4302540.1387781/1‑94 (MQ=60)

                             GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTAC                                                                  <  SRR4302540.9844450/94‑1 (MQ=60)

                             GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTAC                                                                  <  SRR4302540.384426/94‑1 (MQ=60)

                              GTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACG                                                                 <  SRR4302540.10024702/94‑1 (MQ=60)

                              GTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACG                                                                 >  SRR4302540.3300575/1‑94 (MQ=60)

                              GTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACG                                                                 <  SRR4302540.3823515/94‑1 (MQ=60)

                              GTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACG                                                                 >  SRR4302540.9102768/1‑94 (MQ=60)

                               TTTTGCGCCAGATGACTGAACCGCGAGTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCAGGTTTTATC‑TGTTGAACCGTCATTTACAG                                                                <  SRR4302540.9091126/94‑1 (MQ=60)

                               TTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGG                                                                <  SRR4302540.8628368/94‑1 (MQ=60)

                                TTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGC                                                               >  SRR4302540.9770790/1‑94 (MQ=60)

                                 TTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCA                                                              <  SRR4302540.7005695/94‑1 (MQ=60)

                                  TGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAA                                                             <  SRR4302540.1230108/94‑1 (MQ=60)

                                   GCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAAT                                                            <  SRR4302540.790663/94‑1 (MQ=60)

                                   GCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAAT                                                            <  SRR4302540.9412195/94‑1 (MQ=60)

                                    CGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATA                                                           <  SRR4302540.7344117/94‑1 (MQ=60)

                                     GCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAA                                                          >  SRR4302540.6533919/1‑94 (MQ=60)

                                     GCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAA                                                          >  SRR4302540.9794071/1‑94 (MQ=60)

                                     GCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAA                                                          <  SRR4302540.4123223/94‑1 (MQ=60)

                                      CCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAAC                                                         >  SRR4302540.8460737/1‑94 (MQ=60)

                                      CCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAAC                                                         <  SRR4302540.1369047/94‑1 (MQ=60)

                                         GATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTC                                                      >  SRR4302540.1745628/1‑94 (MQ=60)

                                          ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCA                                                     >  SRR4302540.4404636/1‑94 (MQ=60)

                                          ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCA                                                     <  SRR4302540.3340255/94‑1 (MQ=60)

                                          ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCA                                                     <  SRR4302540.7073629/94‑1 (MQ=60)

                                          ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCA                                                     <  SRR4302540.8380420/94‑1 (MQ=60)

                                          ATGAATGACCCGCAAATGGGGAATTTGTGCAGACATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCA                                                     >  SRR4302540.5427482/1‑94 (MQ=60)

                                           TGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAA                                                    <  SRR4302540.4040757/94‑1 (MQ=60)

                                            GAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAAT                                                   <  SRR4302540.9243566/94‑1 (MQ=60)

                                            GAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAAT                                                   <  SRR4302540.5068224/94‑1 (MQ=60)

                                             AATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATG                                                  >  SRR4302540.3744615/1‑94 (MQ=60)

                                             AATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATG                                                  <  SRR4302540.8478409/94‑1 (MQ=60)

                                             AATGACACGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATG                                                  <  SRR4302540.3844452/94‑1 (MQ=60)

                                              ATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGT                                                 <  SRR4302540.3007265/94‑1 (MQ=60)

                                              ATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGT                                                 <  SRR4302540.3163381/94‑1 (MQ=60)

                                              ATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGT                                                 >  SRR4302540.3687901/1‑94 (MQ=60)

                                               TGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTT                                                >  SRR4302540.6933971/1‑94 (MQ=60)

                                               TGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTT                                                >  SRR4302540.3914708/1‑94 (MQ=60)

                                               TGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTT                                                >  SRR4302540.4392473/1‑94 (MQ=60)

                                                GACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCTCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTC                                               >  SRR4302540.2619096/1‑94 (MQ=60)

                                                GACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCCGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTC                                               >  SRR4302540.9849140/1‑94 (MQ=60)

                                                 GCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCT                                              <  SRR4302540.3605465/94‑1 (MQ=60)

                                                 GCCCGCAAATGGGGAATGTGTGCAGCCATGCGATCCAGGATGGGGGCGGGTTTATCGTGTT‑AACCGTCATTTACGGCAATAACTTCAATGTTCT                                              <  SRR4302540.4247000/94‑1 (MQ=50)

                                                 ACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCT                                              >  SRR4302540.8339148/1‑94 (MQ=60)

                                                 ACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCT                                              <  SRR4302540.4247003/94‑1 (MQ=60)

                                                  CCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTC                                             <  SRR4302540.10133009/94‑1 (MQ=60)

                                                   CCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCA                                            <  SRR4302540.4538829/94‑1 (MQ=60)

                                                   CCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATAGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCA                                            >  SRR4302540.4664435/1‑94 (MQ=60)

                                                   CCGCAAATGGGGAATTTGTGCAGCCATGCGA‑CCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           <  SRR4302540.6764854/94‑1 (MQ=60)

                                                    CGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           >  SRR4302540.8595878/1‑94 (MQ=60)

                                                    CGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           <  SRR4302540.3305456/94‑1 (MQ=60)

                                                    CGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           <  SRR4302540.560177/94‑1 (MQ=60)

                                                    CGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           >  SRR4302540.8473262/1‑94 (MQ=60)

                                                    CGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAT                                           <  SRR4302540.3853852/94‑1 (MQ=60)

                                                     GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA                                          <  SRR4302540.9431358/94‑1 (MQ=60)

                                                     GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA                                          <  SRR4302540.6220728/94‑1 (MQ=60)

                                                     GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA                                          <  SRR4302540.6384969/94‑1 (MQ=60)

                                                     GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA                                          <  SRR4302540.3709908/94‑1 (MQ=60)

                                                      CAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAA                                         >  SRR4302540.6491622/1‑94 (MQ=60)

                                                      CAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAA                                         <  SRR4302540.3818623/94‑1 (MQ=60)

                                                      CAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAA                                         <  SRR4302540.6945920/94‑1 (MQ=60)

                                                       AAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAC                                        >  SRR4302540.6955350/1‑94 (MQ=60)

                                                       AAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAC                                        <  SRR4302540.1942127/94‑1 (MQ=60)

                                                       AAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAC                                        >  SRR4302540.7275845/1‑94 (MQ=60)

                                                       AAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAC                                        <  SRR4302540.5750828/94‑1 (MQ=60)

                                                        AGTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACG                                       <  SRR4302540.8346309/94‑1 (MQ=60)

                                                        AATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACG                                       <  SRR4302540.4822943/94‑1 (MQ=60)

                                                          TGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCT                                     >  SRR4302540.4269638/1‑94 (MQ=60)

                                                          TGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCT                                     <  SRR4302540.5549684/94‑1 (MQ=60)

                                                           GGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTG                                    <  SRR4302540.10116796/94‑1 (MQ=60)

                                                           GGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTG                                    <  SRR4302540.5283953/94‑1 (MQ=60)

                                                           GGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTG                                    >  SRR4302540.5401177/1‑94 (MQ=60)

                                                           GGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGCTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTG                                    >  SRR4302540.4298503/1‑94 (MQ=60)

                                                            GGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGT                                   <  SRR4302540.7259973/94‑1 (MQ=60)

                                                             GGAATTTGTGCATCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTG                                  <  SRR4302540.412552/94‑1 (MQ=60)

                                                                ATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTA                               >  SRR4302540.1746485/1‑94 (MQ=60)

                                                                ATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTA                               >  SRR4302540.8259536/1‑94 (MQ=60)

                                                                ATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTA                               >  SRR4302540.2410958/1‑94 (MQ=60)

                                                                 TTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAA                              <  SRR4302540.6167216/94‑1 (MQ=60)

                                                                 TTTGTGCAGCCATGCGATCCAGGATGGCGCGCGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAA                              <  SRR4302540.6167217/94‑1 (MQ=60)

                                                                  TTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAA                             <  SRR4302540.2465542/94‑1 (MQ=60)

                                                                   TGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAG                            <  SRR4302540.848464/94‑1 (MQ=60)

                                                                   TGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAG                            <  SRR4302540.5689446/94‑1 (MQ=60)

                                                                    GTGCGGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGC                           >  SRR4302540.7945519/1‑94 (MQ=60)

                                                                    GTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGC                           <  SRR4302540.7149364/94‑1 (MQ=60)

                                                                     TGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCG                          <  SRR4302540.9168394/94‑1 (MQ=60)

                                                                     TGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCG                          <  SRR4302540.2352154/94‑1 (MQ=60)

                                                                      GCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGG                         >  SRR4302540.9120660/1‑94 (MQ=60)

                                                                      GCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGG                         >  SRR4302540.6776029/1‑94 (MQ=60)

                                                                       CAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGC                        <  SRR4302540.9765608/94‑1 (MQ=60)

                                                                       CAGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGC                        <  SRR4302540.2562809/94‑1 (MQ=60)

                                                                        AGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCG                       >  SRR4302540.615194/1‑94 (MQ=60)

                                                                        AGCCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCG                       >  SRR4302540.4407839/1‑94 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTG                     <  SRR4302540.1324218/94‑1 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTG                     >  SRR4302540.9301802/1‑94 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTG                     <  SRR4302540.9759518/94‑1 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTG                     <  SRR4302540.8930822/94‑1 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTG                     <  SRR4302540.1555765/94‑1 (MQ=60)

                                                                          CCATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTACAATGTTCTCATAACGCTGTGCTCAAGGGTCGTG                     >  SRR4302540.5524364/1‑94 (MQ=60)

                                                                           CATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGT                    <  SRR4302540.4519068/94‑1 (MQ=60)

                                                                           CATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGT                    <  SRR4302540.6764784/94‑1 (MQ=60)

                                                                           CATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGT                    <  SRR4302540.2723646/94‑1 (MQ=60)

                                                                            ATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTA                   >  SRR4302540.2214898/1‑94 (MQ=60)

                                                                            ATGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTA                   >  SRR4302540.3907462/1‑94 (MQ=60)

                                                                             TGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAT                  <  SRR4302540.4280490/94‑1 (MQ=60)

                                                                             TGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAT                  <  SRR4302540.5829163/94‑1 (MQ=60)

                                                                             TGCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAT                  >  SRR4302540.1178791/1‑94 (MQ=60)

                                                                             TGCGACCGAGGATGGCGCGAGTTTTATC‑TGTTGGACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAT                  <  SRR4302540.8956717/94‑1 (MQ=60)

                                                                              GCGATCGAGGAGGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATG                 <  SRR4302540.190472/94‑1 (MQ=60)

                                                                              GCGATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATG                 <  SRR4302540.4429007/94‑1 (MQ=60)

                                                                                GATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT               >  SRR4302540.6046127/1‑94 (MQ=60)

                                                                                GATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT               >  SRR4302540.8817980/1‑94 (MQ=60)

                                                                                GATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT               <  SRR4302540.713110/94‑1 (MQ=60)

                                                                                 ATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT              >  SRR4302540.6077272/1‑94 (MQ=60)

                                                                                 ATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT              >  SRR4302540.6258496/1‑94 (MQ=60)

                                                                                 ATCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT              <  SRR4302540.10030676/94‑1 (MQ=60)

                                                                                  TCCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTT             <  SRR4302540.2858106/94‑1 (MQ=60)

                                                                                   CCAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTC            >  SRR4302540.8559195/1‑94 (MQ=60)

                                                                                    CAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCC           <  SRR4302540.9371475/94‑1 (MQ=60)

                                                                                    CAGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCC           >  SRR4302540.8489131/1‑94 (MQ=60)

                                                                                     AGGATGGCGCGGGTTTTATC‑TGTTGAGCCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCT          <  SRR4302540.4342388/94‑1 (MQ=60)

                                                                                     AGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCT          >  SRR4302540.8707785/1‑94 (MQ=60)

                                                                                     AGGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCT          >  SRR4302540.9468736/1‑94 (MQ=60)

                                                                                      GGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGCGTATGGTTTCCTC         >  SRR4302540.7364381/1‑94 (MQ=60)

                                                                                      GGATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGCGTATGGTGTCCTC         >  SRR4302540.7364380/1‑94 (MQ=60)

                                                                                       GATGGCGCTGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCA        >  SRR4302540.4829784/1‑94 (MQ=60)

                                                                                       GATGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCA        >  SRR4302540.122844/1‑94 (MQ=60)

                                                                                         TGGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAAC      <  SRR4302540.8114639/94‑1 (MQ=60)

                                                                                          GGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACG     >  SRR4302540.1632611/1‑94 (MQ=60)

                                                                                          GGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACG     >  SRR4302540.1632610/1‑94 (MQ=60)

                                                                                          GGCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACG     >  SRR4302540.1178944/1‑94 (MQ=60)

                                                                                           GCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGT    >  SRR4302540.8987140/1‑94 (MQ=60)

                                                                                           GCGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGGTTCCTCAACGT    >  SRR4302540.8987141/1‑94 (MQ=60)

                                                                                            CGCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTT   <  SRR4302540.7107902/94‑1 (MQ=60)

                                                                                             GCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT  <  SRR4302540.6080112/94‑1 (MQ=60)

                                                                                             GCGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT  >  SRR4302540.7170401/1‑94 (MQ=60)

TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATC‑TGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT  >  NC_000913/1086620‑1086806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`