Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,088,752	A→G	V110A (GTG→GCG)	ycdR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,088,752	0	A	G	98.9%	832.7 / ‑4.8	262	V110A (GTG→GCG)	ycdR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (155/104); total (156/106)
Fisher's exact test for biased strand distribution p-value = 5.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 272 total aligned reads displayed.

ACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC  >  NC_000913/1088662‑1088841

aCGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCt                                                                                         >  1:5091604/1‑93 (MQ=255)

 cGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTa                                                                                        <  2:2437071/93‑1 (MQ=255)

  gggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAc                                                                                       <  1:645946/93‑1 (MQ=255)

  gggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAc                                                                                       <  1:7658805/93‑1 (MQ=255)

  gggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAc                                                                                       >  2:6046639/1‑93 (MQ=255)

    gggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAg                                                                                     >  2:128779/1‑93 (MQ=255)

     ggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGc                                                                                    <  2:8592040/93‑1 (MQ=255)

      gCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCt                                                                                   <  2:5343005/93‑1 (MQ=255)

        ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt                                                                                 >  2:3837504/1‑93 (MQ=255)

         cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTTATCAAAAGTCAGCGCTACAGCtttt                                                                                >  2:2221151/1‑93 (MQ=255)

         cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtttt                                                                                <  2:5126574/93‑1 (MQ=255)

          aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               <  2:466715/93‑1 (MQ=255)

          aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               >  1:9910375/1‑93 (MQ=255)

          aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               <  1:2656407/93‑1 (MQ=255)

           tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  1:3146141/1‑93 (MQ=255)

           tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  2:2545700/1‑93 (MQ=255)

           tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  1:3701303/1‑93 (MQ=255)

           tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  1:8814243/1‑93 (MQ=255)

           aaCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              <  1:4792253/92‑1 (MQ=255)

            aCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTcc                                                                             >  2:4753976/1‑93 (MQ=255)

            aCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTACGGGAGCGGTCATCAAAAGTCAGCGCTACAGCCGTTTcc                                                                             >  1:825279/1‑93 (MQ=255)

             cagcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCg                                                                            >  1:3903415/1‑93 (MQ=255)

               gcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGt                                                                          <  2:2513029/93‑1 (MQ=255)

                  ggCCACTGGAAGGCCTGAAGAATTGGTAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGc                                                                       <  2:3963014/93‑1 (MQ=255)

                  ggCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAgg                                                                       >  1:907680/1‑92 (MQ=255)

                   gCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCg                                                                      >  2:8940472/1‑93 (MQ=255)

                    ccACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCgg                                                                     <  2:6618929/93‑1 (MQ=255)

                    ccACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCgg                                                                     <  2:7873769/93‑1 (MQ=255)

                     cgcTGGAAGGTCTGAAGAAGTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGt                                                                    <  1:1291482/91‑1 (MQ=255)

                     cACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGt                                                                    <  1:9859954/93‑1 (MQ=255)

                     cACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGt                                                                    >  2:3563615/1‑93 (MQ=255)

                      aCTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGtt                                                                   <  1:10038522/93‑1 (MQ=255)

                       cTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGttt                                                                  >  2:8304135/1‑93 (MQ=255)

                        tGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGtttt                                                                 >  1:5926436/1‑93 (MQ=255)

                         ggAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtc                                                                >  1:6606412/1‑93 (MQ=255)

                          gAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc                                                               <  2:5215601/93‑1 (MQ=255)

                            aGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcctc                                                             <  2:6941359/93‑1 (MQ=255)

                            aGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcctc                                                             <  2:6449675/93‑1 (MQ=255)

                              gCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTcctcct                                                           <  2:1282917/93‑1 (MQ=255)

                                 tGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATTAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTcctccttgt                                                        >  2:5629657/1‑90 (MQ=255)

                                 tGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATTAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGa                                                        >  1:934043/1‑93 (MQ=255)

                                 tGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCATCCTCGa                                                        >  1:6945801/1‑93 (MQ=255)

                                 tGAAGAATTGGGAAGACGCGGGCATAAAAACTCTGGTAGCCGTCATAAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTGGa                                                        >  1:7957277/1‑93 (MQ=255)

                                  gaagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAt                                                       >  1:6710111/1‑93 (MQ=255)

                                   aagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtg                                                      <  2:284835/93‑1 (MQ=255)

                                    agaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtgt                                                     >  1:2235320/1‑93 (MQ=255)

                                        ttGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCtt                                                 <  1:9484001/93‑1 (MQ=255)

                                        ttGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCtt                                                 >  1:5383258/1‑93 (MQ=255)

                                          gggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCa                                               >  2:7989013/1‑93 (MQ=255)

                                            gAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACg                                             >  2:111521/1‑93 (MQ=255)

                                             aaGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGa                                            >  1:4630220/1‑93 (MQ=255)

                                             aaGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGa                                            <  1:5143443/93‑1 (MQ=255)

                                                aCGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAtt                                         <  1:6190990/93‑1 (MQ=255)

                                                 cgcgGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAttt                                        <  1:5288303/93‑1 (MQ=255)

                                                   cgGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGa                                      <  2:2576319/93‑1 (MQ=255)

                                                    gggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAg                                     <  1:1857352/93‑1 (MQ=255)

                                                     ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  1:8472144/1‑93 (MQ=255)

                                                     ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  1:163368/1‑93 (MQ=255)

                                                     ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  1:2898340/1‑93 (MQ=255)

                                                     ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  2:371215/1‑93 (MQ=255)

                                                        ataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTATCCTCCTCGATGTGCTTCACGAATTTGAGCAAt                                 >  2:9625098/1‑93 (MQ=255)

                                                         taAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATa                                >  2:2402451/1‑93 (MQ=255)

                                                         taAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATa                                <  2:9345935/93‑1 (MQ=255)

                                                         taAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATa                                >  1:4822870/1‑93 (MQ=255)

                                                         taAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATa                                <  2:8429567/93‑1 (MQ=255)

                                                          aaaaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATAc                               >  1:7099282/1‑93 (MQ=255)

                                                            aaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTg                             >  1:3200294/1‑93 (MQ=255)

                                                             aaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGa                            <  1:1463637/93‑1 (MQ=255)

                                                              aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           >  1:7383109/1‑93 (MQ=255)

                                                              aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           <  1:3565926/93‑1 (MQ=255)

                                                               ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          >  1:8668443/1‑93 (MQ=255)

                                                               ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          <  1:4099724/93‑1 (MQ=255)

                                                                  tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt                       <  1:7877810/93‑1 (MQ=255)

                                                                  tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt                       <  1:4266614/93‑1 (MQ=255)

                                                                   ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      >  1:8730927/1‑93 (MQ=255)

                                                                   ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      >  1:5706962/1‑93 (MQ=255)

                                                                   ggTAGCCGCCATCAACAGTCAGCACTACAGCTTTTTCCGGGCGCGGTTTTCGTCCGCGATGTGCTTCACGAATGTGCGACATACTGACAGGtc                      >  2:5916478/1‑92 (MQ=255)

                                                                    gTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTg                     <  2:7068262/93‑1 (MQ=255)

                                                                    gTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTg                     >  1:4386457/1‑93 (MQ=255)

                                                                          gTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcc               <  2:3806354/93‑1 (MQ=255)

                                                                           tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcag              >  1:6977674/1‑91 (MQ=255)

                                                                           tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCg              >  2:1368268/1‑93 (MQ=255)

                                                                           tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGCAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACAGGTTGATAACCg              >  1:2279949/1‑93 (MQ=255)

                                                                            catcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGt             <  2:6078047/93‑1 (MQ=255)

                                                                              tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           >  1:2035335/1‑93 (MQ=255)

                                                                              tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           >  2:7625453/1‑93 (MQ=255)

                                                                              tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           >  2:7236657/1‑93 (MQ=255)

                                                                               caAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtct          <  2:3127972/93‑1 (MQ=255)

                                                                               caAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtct          <  2:8865923/93‑1 (MQ=255)

                                                                                aaaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtctc         >  1:1185986/1‑93 (MQ=255)

                                                                                aaaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtctc         >  1:8095597/1‑93 (MQ=255)

                                                                                aaaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtctc         >  1:9799106/1‑93 (MQ=255)

                                                                                 aaaGTCAGCGCTACAGCTTTTTCCGGTTGCGGTTTTCCTCCTCGTTGTGCTTCTTGAAATATAGCAATACTGACCGGTTGATAACCGTGCTcg        >  1:8925633/1‑93 (MQ=255)

                                                                                 aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg        >  1:3330244/1‑93 (MQ=255)

                                                                                 aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg        >  2:3372587/1‑93 (MQ=255)

                                                                                  aaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcgc       <  2:6334419/93‑1 (MQ=255)

                                                                                    gTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCgcgc     >  2:4188093/1‑93 (MQ=255)

                                                                                     tCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCa    <  2:1809314/93‑1 (MQ=255)

                                                                                      cAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAg   >  1:9702300/1‑93 (MQ=255)

                                                                                      cAGCGCTACAGCTTTGTCCGGTAGCCGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAg   <  1:3307996/93‑1 (MQ=255)

ACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC  >  NC_000913/1088662‑1088841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCGACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  >  NC_000913/1088659‑1088845

CCGACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCG                                                                                               <  SRR4302540.7262965/94‑1 (MQ=60)

 CGACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGC                                                                                              >  SRR4302540.1027305/1‑94 (MQ=60)

 CGACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGC                                                                                              >  SRR4302540.123373/1‑94 (MQ=60)

  GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCT                                                                                             <  SRR4302540.1244323/94‑1 (MQ=60)

  GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCT                                                                                             >  SRR4302540.5146682/1‑94 (MQ=60)

   ACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTA                                                                                            >  SRR4302540.8839029/1‑94 (MQ=60)

     GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA                                                                                          <  SRR4302540.7745043/94‑1 (MQ=60)

     GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA                                                                                          <  SRR4302540.652829/94‑1 (MQ=60)

     GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA                                                                                          <  SRR4302540.5235959/94‑1 (MQ=60)

     GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA                                                                                          <  SRR4302540.3538101/94‑1 (MQ=60)

      GGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAG                                                                                         <  SRR4302540.7326318/94‑1 (MQ=60)

      GGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAG                                                                                         <  SRR4302540.9084171/94‑1 (MQ=60)

          CCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTT                                                                                     >  SRR4302540.3621768/1‑94 (MQ=60)

           CCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTT                                                                                    >  SRR4302540.3828544/1‑94 (MQ=60)

            CATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTT                                                                                   >  SRR4302540.613847/1‑94 (MQ=60)

            CATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTT                                                                                   >  SRR4302540.10026132/1‑94 (MQ=60)

            CATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTT                                                                                   <  SRR4302540.322352/94‑1 (MQ=60)

            CATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTCTT                                                                                   >  SRR4302540.5767858/1‑94 (MQ=60)

             GTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.1655730/1‑94 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGCAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.9924581/1‑94 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.6851574/1‑94 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.3180418/1‑94 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  <  SRR4302540.2685236/94‑1 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.3741710/1‑94 (MQ=60)

             ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC                                                                                  >  SRR4302540.8916151/1‑94 (MQ=60)

              TACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCC                                                                                 >  SRR4302540.834057/1‑94 (MQ=60)

              TACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCC                                                                                 <  SRR4302540.4848935/94‑1 (MQ=60)

              TACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTACGGGAGCGGTCATCAAAAGTCAGCGCTACAGCCGTTTCC                                                                                 >  SRR4302540.834058/1‑94 (MQ=60)

              AACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCC                                                                                 <  SRR4302540.4843507/94‑1 (MQ=60)

               ACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCG                                                                                >  SRR4302540.3945751/1‑94 (MQ=60)

                CAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGG                                                                               >  SRR4302540.4602498/1‑94 (MQ=60)

                   CAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAG                                                                            <  SRR4302540.4371876/94‑1 (MQ=60)

                    AGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGG                                                                           >  SRR4302540.917310/1‑94 (MQ=60)

                    AGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGC                                                                           >  SRR4302540.7035624/1‑94 (MQ=60)

                     GGCCACGGAAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCG                                                                          <  SRR4302540.8026522/94‑1 (MQ=60)

                       CCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGT                                                                        >  SRR4302540.9239080/1‑94 (MQ=60)

                       CCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGT                                                                        <  SRR4302540.1271443/94‑1 (MQ=60)

                       CCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGCATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGT                                                                        >  SRR4302540.6278379/1‑94 (MQ=60)

                        CGCTGGAAGGTCTGAAGAAGTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTT                                                                       <  SRR4302540.1304837/94‑1 (MQ=60)

                        CACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTT                                                                       <  SRR4302540.9975160/94‑1 (MQ=60)

                        CACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTT                                                                       <  SRR4302540.1304838/94‑1 (MQ=60)

                         ACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTT                                                                      <  SRR4302540.10155251/94‑1 (MQ=60)

                          CTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTT                                                                     <  SRR4302540.5035356/94‑1 (MQ=60)

                          CTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTT                                                                     >  SRR4302540.5991917/1‑94 (MQ=60)

                           TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC                                                                    >  SRR4302540.6679563/1‑94 (MQ=60)

                           TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC                                                                    >  SRR4302540.6679565/1‑94 (MQ=60)

                           TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC                                                                    >  SRR4302540.6679564/1‑94 (MQ=60)

                           TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC                                                                    >  SRR4302540.8790479/1‑94 (MQ=60)

                           TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC                                                                    <  SRR4302540.9524170/94‑1 (MQ=60)

                            GGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCC                                                                   <  SRR4302540.7696205/94‑1 (MQ=60)

                            GGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCC                                                                   <  SRR4302540.7696206/94‑1 (MQ=60)

                               AGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCC                                                                >  SRR4302540.3266889/1‑94 (MQ=60)

                               AGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCC                                                                <  SRR4302540.2724655/94‑1 (MQ=60)

                               AGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCC                                                                >  SRR4302540.8649808/1‑94 (MQ=60)

                                  CCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCG                                                             >  SRR4302540.482364/1‑94 (MQ=60)

                                  CCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCG                                                             >  SRR4302540.9429489/1‑94 (MQ=60)

                                   CTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATTAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGA                                                            >  SRR4302540.943840/1‑94 (MQ=60)

                                   CTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGA                                                            >  SRR4302540.4180291/1‑94 (MQ=60)

                                   CTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGA                                                            >  SRR4302540.7854626/1‑94 (MQ=60)

                                   CTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCATCCTCGA                                                            >  SRR4302540.7023106/1‑94 (MQ=60)

                                   CTGAAGAATTGGGAAGACGCGGGCATAAAAACTCTGGTAGCCGTCATAAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTGGA                                                            >  SRR4302540.8050031/1‑94 (MQ=60)

                                    TGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAT                                                           >  SRR4302540.9534331/1‑94 (MQ=60)

                                    TGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAT                                                           >  SRR4302540.6784157/1‑94 (MQ=60)

                                     GAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATG                                                          >  SRR4302540.5525033/1‑94 (MQ=60)

                                      AAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGT                                                         >  SRR4302540.2259368/1‑94 (MQ=60)

                                      AAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGT                                                         <  SRR4302540.1638930/94‑1 (MQ=60)

                                       AGAATTGGGAAGACGCGGGTATAAAACCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTG                                                        <  SRR4302540.3985615/94‑1 (MQ=60)

                                       AGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTG                                                        >  SRR4302540.7117568/1‑94 (MQ=60)

                                        GAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGC                                                       >  SRR4302540.8706268/1‑94 (MQ=60)

                                         AATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCT                                                      >  SRR4302540.3148946/1‑94 (MQ=60)

                                          ATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTT                                                     >  SRR4302540.6457842/1‑94 (MQ=60)

                                          ATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTT                                                     >  SRR4302540.5442473/1‑94 (MQ=60)

                                           TTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTC                                                    <  SRR4302540.3259929/94‑1 (MQ=60)

                                           TTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTC                                                    <  SRR4302540.9596450/94‑1 (MQ=60)

                                           TTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTC                                                    <  SRR4302540.787202/94‑1 (MQ=60)

                                           TTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTC                                                    <  SRR4302540.9596449/94‑1 (MQ=60)

                                            TGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCA                                                   <  SRR4302540.3191768/94‑1 (MQ=60)

                                               GAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGA                                                >  SRR4302540.4679815/1‑94 (MQ=60)

                                               GAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGA                                                >  SRR4302540.5415725/1‑94 (MQ=60)

                                                AAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAA                                               <  SRR4302540.5199143/94‑1 (MQ=60)

                                                AAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAA                                               <  SRR4302540.5199145/94‑1 (MQ=60)

                                                   ACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTT                                            <  SRR4302540.6259913/94‑1 (MQ=60)

                                                    CGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTG                                           <  SRR4302540.5346103/94‑1 (MQ=60)

                                                      CGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAG                                         >  SRR4302540.3880325/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.6782346/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.8570538/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        <  SRR4302540.1431022/94‑1 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        <  SRR4302540.9086421/94‑1 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.165004/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        <  SRR4302540.1877719/94‑1 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.2929954/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.1983474/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.8186844/1‑94 (MQ=60)

                                                       GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC                                        >  SRR4302540.4410269/1‑94 (MQ=60)

                                                        GGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCA                                       <  SRR4302540.2147862/94‑1 (MQ=60)

                                                         GTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAA                                      <  SRR4302540.4872541/94‑1 (MQ=60)

                                                         GTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAA                                      >  SRR4302540.10072640/1‑94 (MQ=60)

                                                          TATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAAT                                     >  SRR4302540.993762/1‑94 (MQ=60)

                                                           ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA                                    >  SRR4302540.5361136/1‑94 (MQ=60)

                                                           ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA                                    <  SRR4302540.10080553/94‑1 (MQ=60)

                                                           ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA                                    >  SRR4302540.2550044/1‑94 (MQ=60)

                                                           ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA                                    <  SRR4302540.4646564/94‑1 (MQ=60)

                                                           ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA                                    >  SRR4302540.4874503/1‑94 (MQ=60)

                                                            TAAAAGCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATAC                                   <  SRR4302540.7342647/94‑1 (MQ=60)

                                                            TAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATAC                                   >  SRR4302540.7178279/1‑94 (MQ=60)

                                                              AAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTG                                 >  SRR4302540.3235049/1‑94 (MQ=60)

                                                                AACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAC                               >  SRR4302540.7465374/1‑94 (MQ=60)

                                                                AACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAC                               <  SRR4302540.1479595/94‑1 (MQ=60)

                                                                 ACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACC                              >  SRR4302540.8769135/1‑94 (MQ=60)

                                                                 ACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACC                              >  SRR4302540.2851494/1‑94 (MQ=60)

                                                                 ACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACC                              <  SRR4302540.3604879/94‑1 (MQ=60)

                                                                  CTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCG                             <  SRR4302540.4143949/94‑1 (MQ=60)

                                                                   TCTGGTAGCCGTCATCAAAAGTCAGCGCTACATCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGG                            <  SRR4302540.8773252/94‑1 (MQ=60)

                                                                    CTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGT                           >  SRR4302540.8952318/1‑94 (MQ=60)

                                                                     TGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTT                          <  SRR4302540.7969819/94‑1 (MQ=60)

                                                                     TGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTT                          <  SRR4302540.4313018/94‑1 (MQ=60)

                                                                     TGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTT                          >  SRR4302540.8832314/1‑94 (MQ=60)

                                                                     TGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTT                          >  SRR4302540.5769791/1‑94 (MQ=60)

                                                                      GGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTG                         >  SRR4302540.4434075/1‑94 (MQ=60)

                                                                      GGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTG                         >  SRR4302540.2095807/1‑94 (MQ=60)

                                                                      GGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTG                         >  SRR4302540.194238/1‑94 (MQ=60)

                                                                      GGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTG                         >  SRR4302540.9992631/1‑94 (MQ=60)

                                                                       GTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGA                        >  SRR4302540.5805299/1‑94 (MQ=60)

                                                                        TAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGAT                       >  SRR4302540.2261318/1‑94 (MQ=60)

                                                                            CGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACC                   <  SRR4302540.3349783/94‑1 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  >  SRR4302540.6167968/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  <  SRR4302540.102259/94‑1 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  >  SRR4302540.8169137/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  >  SRR4302540.9863550/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  >  SRR4302540.1238217/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCG                  >  SRR4302540.7055197/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACAG                  >  SRR4302540.7055198/1‑94 (MQ=60)

                                                                             GTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGCAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACAGGTTGATAACCG                  >  SRR4302540.2304441/1‑94 (MQ=60)

                                                                              TCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGT                 >  SRR4302540.2598265/1‑94 (MQ=60)

                                                                              TCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGT                 >  SRR4302540.5073544/1‑94 (MQ=60)

                                                                               CATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTT                >  SRR4302540.1873538/1‑94 (MQ=60)

                                                                               CATCAAAAGTCAGCGCTACAGCTTTGTCCGGTAGTGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTT                <  SRR4302540.8519225/94‑1 (MQ=60)

                                                                                ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC               >  SRR4302540.2057284/1‑94 (MQ=60)

                                                                                ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC               <  SRR4302540.8892541/94‑1 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             <  SRR4302540.6794542/94‑1 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             >  SRR4302540.1198222/1‑94 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             >  SRR4302540.8189563/1‑94 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             >  SRR4302540.3662572/1‑94 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             >  SRR4302540.8189562/1‑94 (MQ=60)

                                                                                  CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC             >  SRR4302540.9913850/1‑94 (MQ=60)

                                                                                   AAAAGTCAGCGCTACAGCTTTTTCCGGTTGCGGTTTTCCTCCTCGTTGTGCTTCTTGAAATATAGCAATACTGACCGGTTGATAACCGTGCTCG            >  SRR4302540.9029420/1‑94 (MQ=53)

                                                                                   AAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCG            >  SRR4302540.3366804/1‑94 (MQ=60)

                                                                                      AGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGC         >  SRR4302540.9830140/1‑94 (MQ=60)

                                                                                        TTAGCGCTACAGCCTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAG       <  SRR4302540.518251/94‑1 (MQ=60)

                                                                                        TCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAG       >  SRR4302540.9816356/1‑94 (MQ=60)

                                                                                        TCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGGTCTCGCGCAG       >  SRR4302540.26817/1‑94 (MQ=60)

                                                                                         CAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC      <  SRR4302540.3344236/94‑1 (MQ=60)

                                                                                         CAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC      >  SRR4302540.4184537/1‑94 (MQ=60)

                                                                                         CAGCGCTACAGCTTTGTCCGGTAGCCGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC      <  SRR4302540.3344235/94‑1 (MQ=60)

                                                                                          AGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCC     >  SRR4302540.7284339/1‑94 (MQ=60)

                                                                                          AGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCC     >  SRR4302540.7752160/1‑94 (MQ=60)

                                                                                           GCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCA    <  SRR4302540.8979848/94‑1 (MQ=60)

                                                                                           GCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCA    <  SRR4302540.7284107/94‑1 (MQ=60)

                                                                                           GCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCA    >  SRR4302540.3714031/1‑94 (MQ=60)

                                                                                            CGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAG   >  SRR4302540.7587125/1‑94 (MQ=60)

                                                                                            CGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGCTGATAACCGTTCTCGCGCAGCCAG   >  SRR4302540.1829872/1‑94 (MQ=60)

                                                                                            CGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTAACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAG   >  SRR4302540.7587126/1‑94 (MQ=60)

                                                                                             GCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  >  SRR4302540.2096770/1‑94 (MQ=60)

                                                                                             GCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  <  SRR4302540.5095015/94‑1 (MQ=60)

                                                                                             GCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  >  SRR4302540.3493621/1‑94 (MQ=60)

                                                                                             GCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  >  SRR4302540.6559906/1‑94 (MQ=60)

CCGACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAGG  >  NC_000913/1088659‑1088845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`