Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,088,752 |
A→G |
V110A (GTG→GCG) |
ycdR ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,088,752 | 0 | A | G | 100.0%
| 658.1
/ NA
| 201 | V110A (GTG→GCG) | ycdR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (95/106); total (95/106) |
Only 100 of 202 total aligned reads displayed.
ACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC > NC_000913/1088662‑1088841
|
cGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTa < 2:5184940/93‑1 (MQ=255)
cGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTa < 1:2893152/93‑1 (MQ=255)
gggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAc < 1:3991690/93‑1 (MQ=255)
ggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACa < 1:4619630/93‑1 (MQ=255)
gggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAg < 2:3349997/93‑1 (MQ=255)
gCCCATCCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCt < 2:2610165/93‑1 (MQ=255)
cccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtt > 2:254415/1‑93 (MQ=255)
ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt > 2:2357102/1‑93 (MQ=255)
ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt > 2:5824306/1‑93 (MQ=255)
ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt < 2:596761/93‑1 (MQ=255)
cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtttt > 2:5525641/1‑93 (MQ=255)
cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtttt > 2:4550773/1‑93 (MQ=255)
aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt < 2:2717687/93‑1 (MQ=255)
tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc > 2:5834237/1‑93 (MQ=255)
tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc > 1:3321599/1‑93 (MQ=255)
aCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTcc < 1:2847777/93‑1 (MQ=255)
aCAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTcc < 1:701949/93‑1 (MQ=255)
cagcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCg < 2:2397920/93‑1 (MQ=255)
gcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGt > 2:3288898/1‑93 (MQ=255)
cagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTa < 1:2522193/93‑1 (MQ=255)
cagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTa > 2:6239685/1‑93 (MQ=255)
agGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAg < 1:4562300/93‑1 (MQ=255)
agGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAg > 1:33689/1‑93 (MQ=255)
cACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGt < 1:223381/93‑1 (MQ=255)
cACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGt > 2:3141355/1‑93 (MQ=255)
tGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGtttt > 2:821461/1‑93 (MQ=255)
ggAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtc > 1:449985/1‑93 (MQ=255)
gAAGGCCTGAAGAATTGGGACGACACGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc < 1:3967703/93‑1 (MQ=255)
gAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc < 2:2619967/93‑1 (MQ=255)
aaGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcct > 1:3699275/1‑93 (MQ=255)
aGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcctc > 1:4225577/1‑93 (MQ=255)
aGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcctc < 2:373063/93‑1 (MQ=255)
cTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCg > 1:4428552/1‑93 (MQ=255)
tGAAGAATTGGGAAGACGCGGGTATAAAAGCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGa < 2:6189593/93‑1 (MQ=255)
taagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAt < 2:3963996/92‑1 (MQ=255)
gaagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAt > 1:16024/1‑93 (MQ=255)
gaagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAt > 1:1872985/1‑93 (MQ=255)
agaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtgt < 1:4717695/93‑1 (MQ=255)
agaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtgt < 1:4268651/93‑1 (MQ=255)
gaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtgtg > 2:1050852/1‑93 (MQ=255)
aTTGGGAATACGCGGGTATAAAAGCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCt < 2:1539257/93‑1 (MQ=255)
tGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTc < 2:4525859/93‑1 (MQ=255)
tGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTc < 2:5057507/93‑1 (MQ=255)
ggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTACTCCTCGATGTGCTTCAc > 2:1733198/1‑93 (MQ=255)
aGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGaa < 1:5714669/93‑1 (MQ=255)
aGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGaa > 2:3887518/1‑93 (MQ=255)
aCGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAtt > 1:1202325/1‑93 (MQ=255)
aCGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAtt < 2:3468681/93‑1 (MQ=255)
aCGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAtt < 1:5606131/93‑1 (MQ=255)
cgGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGa < 1:1003928/93‑1 (MQ=255)
gggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAg > 2:3589967/1‑93 (MQ=255)
gggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAg < 1:525047/93‑1 (MQ=255)
gggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATCTGCTTCACGAATTTGAg > 2:4866898/1‑93 (MQ=255)
ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc > 1:5990531/1‑93 (MQ=255)
tataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCaa > 1:4850358/1‑93 (MQ=255)
ataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAAt < 2:4302238/93‑1 (MQ=255)
aaaaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATAc < 1:5428102/93‑1 (MQ=255)
aaaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACt < 1:5817679/93‑1 (MQ=255)
aaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTg < 1:2464684/93‑1 (MQ=255)
aaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGa < 1:4161277/93‑1 (MQ=255)
gctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCTGTTTTCCTCCTCGATGAGCTTCACGAATTTGAACAATGCTGAc < 2:6047313/92‑1 (MQ=255)
aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc < 1:2321066/93‑1 (MQ=255)
aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc > 2:1172514/1‑93 (MQ=255)
ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc > 2:845956/1‑93 (MQ=255)
ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc > 2:4676986/1‑93 (MQ=255)
ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc < 2:1265113/93‑1 (MQ=255)
ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc < 1:18122/93‑1 (MQ=255)
tctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg > 2:565119/1‑93 (MQ=255)
tctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg < 2:5613499/93‑1 (MQ=255)
tctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg > 2:1201980/1‑93 (MQ=255)
tctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg < 1:3571688/93‑1 (MQ=255)
tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt > 1:3045715/1‑93 (MQ=255)
tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt < 2:3539712/93‑1 (MQ=255)
tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt > 1:4073602/1‑93 (MQ=255)
ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt < 2:215772/93‑1 (MQ=255)
tAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGa > 1:1467813/1‑93 (MQ=255)
tAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGa < 2:1327331/93‑1 (MQ=255)
aGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGAt < 2:622266/93‑1 (MQ=255)
gCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATa < 2:22274/93‑1 (MQ=255)
ccGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATaa > 2:5700006/1‑93 (MQ=255)
ccGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATaa > 2:725590/1‑93 (MQ=255)
cGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAc < 1:5049822/93‑1 (MQ=255)
gTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcc > 1:174708/1‑93 (MQ=255)
gTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcc > 2:5443623/1‑93 (MQ=255)
tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCg < 1:4154750/93‑1 (MQ=255)
tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCg > 2:1861757/1‑93 (MQ=255)
tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCg > 2:3095865/1‑93 (MQ=255)
atcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGtt > 1:2789504/1‑93 (MQ=255)
tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc < 1:275769/93‑1 (MQ=255)
tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc > 1:1995157/1‑93 (MQ=255)
tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc > 1:3192835/1‑93 (MQ=255)
tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc < 1:651527/93‑1 (MQ=255)
tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc < 2:1509598/93‑1 (MQ=255)
caAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtct < 1:1400324/93‑1 (MQ=255)
aaaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtctc > 1:973689/1‑93 (MQ=255)
aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg < 1:937446/93‑1 (MQ=255)
aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg < 2:42046/93‑1 (MQ=255)
aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg < 2:295852/93‑1 (MQ=255)
gTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCgcgc > 2:3085123/1‑93 (MQ=255)
tCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCa < 1:6137532/93‑1 (MQ=255)
|
ACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC > NC_000913/1088662‑1088841
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAG > NC_000913/1088661‑1088844
|
GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCT < SRR4302533.4220227/94‑1 (MQ=60)
GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCT < SRR4302533.2539460/94‑1 (MQ=60)
CGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAC < SRR4302533.2910934/94‑1 (MQ=60)
CGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAC > SRR4302533.2563725/1‑94 (MQ=60)
CGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAC > SRR4302533.66680/1‑94 (MQ=60)
GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA > SRR4302533.5299787/1‑94 (MQ=60)
GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA < SRR4302533.4015999/94‑1 (MQ=60)
GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACA < SRR4302533.1824647/94‑1 (MQ=60)
GGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAG < SRR4302533.4647626/94‑1 (MQ=60)
CCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTT < SRR4302533.3349831/94‑1 (MQ=60)
CCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTT < SRR4302533.1801842/94‑1 (MQ=60)
CATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTT < SRR4302533.1670336/94‑1 (MQ=60)
ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC > SRR4302533.4558892/1‑94 (MQ=60)
ATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTC > SRR4302533.3342115/1‑94 (MQ=60)
ACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCG < SRR4302533.2865301/94‑1 (MQ=60)
ACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCG < SRR4302533.706103/94‑1 (MQ=60)
GCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTA < SRR4302533.5211314/94‑1 (MQ=60)
CAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAG > SRR4302533.33917/1‑94 (MQ=60)
CAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAG < SRR4302533.4427605/94‑1 (MQ=60)
CAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAG < SRR4302533.2537734/94‑1 (MQ=60)
AGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGC < SRR4302533.4589967/94‑1 (MQ=60)
GCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGG < SRR4302533.4830393/94‑1 (MQ=60)
CCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGT > SRR4302533.5926882/1‑94 (MQ=60)
CACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTT > SRR4302533.1248879/1‑94 (MQ=60)
CACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTT < SRR4302533.224774/94‑1 (MQ=60)
ACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTT < SRR4302533.3728643/94‑1 (MQ=60)
TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC > SRR4302533.472645/1‑94 (MQ=60)
TGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTC > SRR4302533.452675/1‑94 (MQ=60)
GGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCC > SRR4302533.2464720/1‑94 (MQ=60)
GGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCC < SRR4302533.5826062/94‑1 (MQ=60)
GGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCC < SRR4302533.3082434/94‑1 (MQ=60)
GAAGGCCTGAAGAATTGGGACGACACGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCT < SRR4302533.3991873/94‑1 (MQ=60)
GAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCT > SRR4302533.3721994/1‑94 (MQ=60)
AAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTC > SRR4302533.4251125/1‑94 (MQ=60)
GGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCT < SRR4302533.2924364/94‑1 (MQ=60)
CCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCG > SRR4302533.4455324/1‑94 (MQ=60)
TGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAT > SRR4302533.1884402/1‑94 (MQ=60)
TGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAT > SRR4302533.16139/1‑94 (MQ=60)
TGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAT > SRR4302533.5078623/1‑94 (MQ=60)
GAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATG < SRR4302533.400041/94‑1 (MQ=60)
AGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTG < SRR4302533.4746302/94‑1 (MQ=60)
AGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTG < SRR4302533.4294349/94‑1 (MQ=60)
GAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGC < SRR4302533.4083956/94‑1 (MQ=60)
ATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTT < SRR4302533.2306372/94‑1 (MQ=60)
GGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGatacagcagatcggaagagcggtt > SRR4302533.250286/1‑70 (MQ=60)
GGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCAC < SRR4302533.1437724/94‑1 (MQ=60)
GAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGA > SRR4302533.4179085/1‑94 (MQ=60)
AGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAT < SRR4302533.5749187/94‑1 (MQ=60)
GACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATT > SRR4302533.1209550/1‑94 (MQ=60)
ACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTT < SRR4302533.6177011/94‑1 (MQ=60)
ACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTT < SRR4302533.5640007/94‑1 (MQ=60)
CGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTG < SRR4302533.3610124/94‑1 (MQ=60)
CGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTG < SRR4302533.459497/94‑1 (MQ=60)
CGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAG < SRR4302533.1009797/94‑1 (MQ=60)
GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC < SRR4302533.528158/94‑1 (MQ=60)
GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC > SRR4302533.6026817/1‑94 (MQ=60)
GGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGC < SRR4302533.2851755/94‑1 (MQ=60)
GTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAA < SRR4302533.418308/94‑1 (MQ=60)
GTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAA > SRR4302533.4879752/1‑94 (MQ=60)
ATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATA > SRR4302533.5700694/1‑94 (MQ=60)
AAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACT < SRR4302533.5460793/94‑1 (MQ=60)
AAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACT < SRR4302533.4233352/94‑1 (MQ=60)
AAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTG < SRR4302533.5852822/94‑1 (MQ=60)
AAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGA < SRR4302533.2872965/94‑1 (MQ=60)
AAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGA < SRR4302533.2479885/94‑1 (MQ=60)
AACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAC < SRR4302533.4186495/94‑1 (MQ=60)
ACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACC < SRR4302533.2335434/94‑1 (MQ=60)
CTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGCTGTGCTTCACGAATTTGAGCAATACTGACCG > SRR4302533.1529654/1‑94 (MQ=60)
CTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCG < SRR4302533.18244/94‑1 (MQ=60)
CTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGG‑TTTCCTCCTTCATCTGCTTCCCCAATTTGAGCAATACTGACCGG > SRR4302533.3523126/1‑94 (MQ=60)
TCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGG < SRR4302533.3593699/94‑1 (MQ=60)
CTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGT > SRR4302533.3064360/1‑94 (MQ=60)
CTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGT > SRR4302533.4098402/1‑94 (MQ=60)
GTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGA < SRR4302533.3330807/94‑1 (MQ=60)
GTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGA > SRR4302533.1476663/1‑94 (MQ=60)
TAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGAT < SRR4302533.4280859/94‑1 (MQ=60)
CGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACC < SRR4302533.5080366/94‑1 (MQ=60)
CGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACC > SRR4302533.175812/1‑94 (MQ=60)
TCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGT < SRR4302533.4179927/94‑1 (MQ=60)
CATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCCATACTGACCGGTTGATAACCGTT > SRR4302533.113571/1‑94 (MQ=60)
CATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTT > SRR4302533.2806655/1‑94 (MQ=60)
CATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTT > SRR4302533.2806653/1‑94 (MQ=60)
CATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTT < SRR4302533.901039/94‑1 (MQ=60)
ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC > SRR4302533.3212475/1‑94 (MQ=60)
ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC > SRR4302533.2227643/1‑94 (MQ=60)
ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC > SRR4302533.2007403/1‑94 (MQ=60)
ATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTC > SRR4302533.1948581/1‑94 (MQ=60)
TCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCT < SRR4302533.277448/94‑1 (MQ=60)
TCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCT < SRR4302533.655377/94‑1 (MQ=60)
CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC > SRR4302533.979405/1‑94 (MQ=60)
CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC > SRR4302533.971145/1‑94 (MQ=60)
CAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTC < SRR4302533.1408764/94‑1 (MQ=60)
AAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCG > SRR4302533.6156834/1‑94 (MQ=60)
AAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGC < SRR4302533.942953/94‑1 (MQ=60)
TCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAG < SRR4302533.6174505/94‑1 (MQ=60)
TCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAG < SRR4302533.5473896/94‑1 (MQ=60)
TCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAG < SRR4302533.447695/94‑1 (MQ=60)
CGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAG > SRR4302533.217213/1‑94 (MQ=60)
|
GACGGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGCCAG > NC_000913/1088661‑1088844
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
