Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,086,713 |
A→G |
R119R (CGT→CGC) |
ycdQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,086,713 | 0 | A | G | 99.0%
| 639.6
/ NA
| 201 | R119R (CGT→CGC) | ycdQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base G (95/103); minor base T (0/2); total (95/106) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 209 total aligned reads displayed.
GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAAC > NC_000913/1086623‑1086802
|
ggTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGcgcg < 1:1190351/93‑1 (MQ=255)
gTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCgg < 2:5415044/93‑1 (MQ=255)
tttAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGt < 1:3311158/93‑1 (MQ=255)
tttAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGt > 1:3722512/1‑93 (MQ=255)
ttAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGtt > 1:3854039/1‑93 (MQ=255)
tAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGttt < 1:22627/93‑1 (MQ=255)
tAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGttt > 1:4185073/1‑93 (MQ=255)
tAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCAGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGttt > 1:3923352/1‑93 (MQ=255)
aGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTa < 2:482761/93‑1 (MQ=255)
aGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCAGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTa < 2:5266449/93‑1 (MQ=255)
gcAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCt < 1:3312315/93‑1 (MQ=255)
cAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTg < 2:3265082/93‑1 (MQ=255)
aaTGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGt < 2:238087/93‑1 (MQ=255)
aaTGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGt < 1:164145/93‑1 (MQ=255)
tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTg > 1:4097666/1‑93 (MQ=255)
tGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTg < 2:4929983/93‑1 (MQ=255)
gCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGaa < 1:1364047/93‑1 (MQ=255)
cTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAc < 2:1465495/93‑1 (MQ=255)
cTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAc > 1:6293236/1‑93 (MQ=255)
cTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAc < 1:791465/93‑1 (MQ=255)
tttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAcc < 2:4020991/93‑1 (MQ=255)
tttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAcc < 2:3974373/93‑1 (MQ=255)
tttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAcc > 1:1328092/1‑93 (MQ=255)
ttCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCg > 1:3044349/1‑93 (MQ=255)
ccccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTc < 1:2902451/93‑1 (MQ=255)
cccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCa < 2:3485228/93‑1 (MQ=255)
ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt > 2:4326840/1‑93 (MQ=255)
ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt < 1:3543204/93‑1 (MQ=255)
ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt < 2:1660998/93‑1 (MQ=255)
ccTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAt < 2:1024309/93‑1 (MQ=255)
cTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAtt < 1:5191947/93‑1 (MQ=255)
tGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAttt < 1:3218038/93‑1 (MQ=255)
ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa < 2:1094623/93‑1 (MQ=255)
ggTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTa < 2:5782084/93‑1 (MQ=255)
ttttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACg < 1:6067206/93‑1 (MQ=255)
tttGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACgg > 1:4642848/1‑93 (MQ=255)
gcCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATa < 1:4932687/93‑1 (MQ=255)
ccAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATaa < 1:2210290/93‑1 (MQ=255)
cAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATaat > 2:4918350/1‑92 (MQ=255)
cAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAAc < 1:3163617/93‑1 (MQ=255)
cAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAAc > 2:5929571/1‑93 (MQ=255)
aGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACt > 2:3760682/1‑93 (MQ=255)
gATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACtt < 1:4282835/93‑1 (MQ=255)
gATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACtt > 2:3796454/1‑93 (MQ=255)
tgaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCa > 1:1008155/1‑93 (MQ=255)
taatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCAAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa < 1:2086507/92‑1 (MQ=255)
gaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa < 1:1856904/93‑1 (MQ=255)
gaatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCAGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCaa > 1:2657879/1‑93 (MQ=255)
aatgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAAt < 2:1599623/93‑1 (MQ=255)
atgaCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATg > 2:5535700/1‑93 (MQ=255)
aCCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtc < 1:2881828/93‑1 (MQ=255)
cccGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtct < 2:2658659/93‑1 (MQ=255)
cccGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGAGGGCGCGGGTTTTATCTGTTGAACCGTCATTTACTGCAATAACTTCAATGGtct > 1:5311988/1‑93 (MQ=255)
ccGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTtctc < 2:2928485/93‑1 (MQ=255)
cGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCa > 2:415674/1‑93 (MQ=255)
gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt < 1:6035703/93‑1 (MQ=255)
gCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCAt > 2:709642/1‑93 (MQ=255)
cAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATa > 1:5153037/1‑93 (MQ=255)
aaaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATaa > 1:4591303/1‑93 (MQ=255)
aaaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATaa < 2:4069021/93‑1 (MQ=255)
aaaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATaa < 2:5399367/93‑1 (MQ=255)
aaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAc > 2:1294785/1‑93 (MQ=255)
aaTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAc < 2:6288446/93‑1 (MQ=255)
aTGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACg < 1:1994912/93‑1 (MQ=255)
tGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGc > 2:123457/1‑93 (MQ=255)
tGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGc > 1:4513230/1‑93 (MQ=255)
gggAATTTGTGCAGCCATGCGATCCAGGATGGCTCGGTTTTTATCTGTGGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCtg < 2:790116/93‑1 (MQ=255)
gAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCtgtg < 2:4296534/93‑1 (MQ=255)
tttGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTa > 1:755391/1‑93 (MQ=255)
tttGTGCAGCCATGCGATCCAGGATGGCGCGGGATTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATCACGCTGTGCTa > 2:5673334/1‑93 (MQ=255)
ttGTGCAGCCATGCGATCCAGGATGGCGCGGGGTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTaa > 1:311773/1‑93 (MQ=255)
tgtgCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTaaa > 1:564630/1‑93 (MQ=255)
tgtgCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTaaa > 2:1171204/1‑93 (MQ=255)
tgCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgc < 1:5640474/93‑1 (MQ=255)
aGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgcggc > 1:4371612/1‑93 (MQ=255)
aGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgcggc < 2:1379973/93‑1 (MQ=255)
gCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgcggcg > 1:2892679/1‑93 (MQ=255)
gCCATGCGATCCAGGATGGCGCGGGTTTAATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAgcggcg < 2:3204340/93‑1 (MQ=255)
ccATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCgt > 1:1133113/1‑93 (MQ=255)
caggCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCgtg < 2:3218872/90‑1 (MQ=255)
cATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCgtg < 2:3626354/93‑1 (MQ=255)
aTGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCgtgt > 2:5983389/1‑93 (MQ=255)
tGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTa > 1:5849498/1‑93 (MQ=255)
tGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTa < 1:3789807/93‑1 (MQ=255)
gCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAt < 2:214678/93‑1 (MQ=255)
gCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAt < 1:276626/93‑1 (MQ=255)
cGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATg < 2:2525049/93‑1 (MQ=255)
gATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATgg < 1:4065121/93‑1 (MQ=255)
tCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGtt < 1:5940104/93‑1 (MQ=255)
tCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGtt < 1:5498839/93‑1 (MQ=255)
tCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGtt > 1:5377513/1‑93 (MQ=255)
ccAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGttt > 2:2747646/1‑93 (MQ=255)
aGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTcc > 2:2794768/1‑93 (MQ=255)
aGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTcc < 1:2113425/93‑1 (MQ=255)
aGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTcc < 2:2595449/93‑1 (MQ=255)
ggATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTCAAGCGGCGTGTATGGTTTCCt > 2:1473644/1‑93 (MQ=255)
ggATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCt > 2:5200703/1‑93 (MQ=255)
gATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTc < 1:4822953/93‑1 (MQ=255)
tGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCaa < 2:5505911/93‑1 (MQ=255)
tGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCaa < 2:3047566/93‑1 (MQ=255)
|
GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAAC > NC_000913/1086623‑1086802
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT > NC_000913/1086620‑1086806
|
TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGTCATGCGGTCCAGGATGGCG > SRR4302533.4867431/1‑94 (MQ=60)
TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCG > SRR4302533.4955991/1‑94 (MQ=60)
TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCG > SRR4302533.3503584/1‑94 (MQ=60)
GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGG < SRR4302533.1197504/94‑1 (MQ=60)
GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGG > SRR4302533.4773240/1‑94 (MQ=60)
GGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGG < SRR4302533.4483226/94‑1 (MQ=60)
TTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGT > SRR4302533.2684735/1‑94 (MQ=60)
TTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGT < SRR4302533.2590264/94‑1 (MQ=60)
TTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGT > SRR4302533.3745354/1‑94 (MQ=60)
TTTTAAGCGCAATGGCTTCCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGT < SRR4302533.3555004/94‑1 (MQ=60)
TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT < SRR4302533.3331603/94‑1 (MQ=60)
TTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTT > SRR4302533.3877579/1‑94 (MQ=60)
TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT > SRR4302533.3943246/1‑94 (MQ=60)
TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT > SRR4302533.2903826/1‑94 (MQ=60)
TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT > SRR4302533.4210413/1‑94 (MQ=60)
TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT < SRR4302533.1362915/94‑1 (MQ=60)
TTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCAGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTT > SRR4302533.3947306/1‑94 (MQ=60)
TAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTT < SRR4302533.22777/94‑1 (MQ=60)
AGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTAT > SRR4302533.5676802/1‑94 (MQ=60)
GCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC > SRR4302533.4604667/1‑94 (MQ=60)
GCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC < SRR4302533.770276/94‑1 (MQ=60)
GCGCAATGGCTTTCCCCTGGTGTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATC < SRR4302533.3008777/94‑1 (MQ=60)
CGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCT < SRR4302533.3548479/94‑1 (MQ=60)
CGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCT < SRR4302533.2486937/94‑1 (MQ=60)
GCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTG < SRR4302533.3332770/94‑1 (MQ=60)
CAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGT > SRR4302533.5952017/1‑94 (MQ=60)
AATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTT > SRR4302533.1052452/1‑94 (MQ=60)
AATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTT < SRR4302533.165189/94‑1 (MQ=60)
ATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTG > SRR4302533.4122609/1‑94 (MQ=60)
ATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTG < SRR4302533.3589292/94‑1 (MQ=60)
GGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAA < SRR4302533.3803250/94‑1 (MQ=60)
GCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAC < SRR4302533.1372240/94‑1 (MQ=60)
GCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAAC > SRR4302533.6330754/1‑94 (MQ=60)
CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACC < SRR4302533.796123/94‑1 (MQ=60)
CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACC > SRR4302533.1336061/1‑94 (MQ=60)
CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACC > SRR4302533.4315198/1‑94 (MQ=60)
CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACC > SRR4302533.562200/1‑94 (MQ=60)
CTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACC > SRR4302533.3190454/1‑94 (MQ=60)
TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCG > SRR4302533.4177816/1‑94 (MQ=60)
TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCG > SRR4302533.6094391/1‑94 (MQ=60)
TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCG > SRR4302533.1912604/1‑94 (MQ=60)
TTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCG > SRR4302533.3062983/1‑94 (MQ=60)
CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCA > SRR4302533.5297260/1‑94 (MQ=60)
CCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCA < SRR4302533.2920279/94‑1 (MQ=60)
CCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAT > SRR4302533.5997003/1‑94 (MQ=60)
CCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATT < SRR4302533.3565038/94‑1 (MQ=60)
CTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTT < SRR4302533.5223266/94‑1 (MQ=60)
CTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTT < SRR4302533.5391047/94‑1 (MQ=60)
TGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTA < SRR4302533.3237881/94‑1 (MQ=60)
GGTTTTGCGCCAGATGAATGACCCGCAAATGGGTAATTTGTGCAGCCATGCGATCCAGGATGGCTCGGGTTTTATCTGTTGAACCGTCATTTAC < SRR4302533.3145969/94‑1 (MQ=60)
GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTAC < SRR4302533.1645578/94‑1 (MQ=60)
GGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTAC < SRR4302533.5074182/94‑1 (MQ=60)
TTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGG > SRR4302533.4670977/1‑94 (MQ=60)
TTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGG < SRR4302533.6103922/94‑1 (MQ=60)
GCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAA < SRR4302533.2097767/94‑1 (MQ=60)
GCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAA < SRR4302533.4962557/94‑1 (MQ=60)
CCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAAC < SRR4302533.2223921/94‑1 (MQ=60)
CCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAAC > SRR4302533.3332460/1‑94 (MQ=60)
CAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACT < SRR4302533.3183088/94‑1 (MQ=60)
GATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTC < SRR4302533.4308574/94‑1 (MQ=60)
ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCA < SRR4302533.2915872/94‑1 (MQ=60)
ATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCA > SRR4302533.1014052/1‑94 (MQ=60)
TGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCAGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAA > SRR4302533.2674208/1‑94 (MQ=60)
TAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCAAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAAT < SRR4302533.2099355/94‑1 (MQ=60)
GAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAAT < SRR4302533.1868231/94‑1 (MQ=60)
GAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAAT > SRR4302533.1205050/1‑94 (MQ=60)
GACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTC > SRR4302533.3858888/1‑94 (MQ=60)
ACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCT < SRR4302533.2899558/94‑1 (MQ=60)
ACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGAGGGCGCGGGTTTTATCTGTTGAACCGTCATTTACTGCAATAACTTCAATGGTCT > SRR4302533.5343823/1‑94 (MQ=60)
CGGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCA < SRR4302533.3313500/94‑1 (MQ=60)
GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA > SRR4302533.5184163/1‑94 (MQ=60)
GCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATA < SRR4302533.6072280/94‑1 (MQ=60)
CAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAA > SRR4302533.4619115/1‑94 (MQ=60)
AAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAAC < SRR4302533.4624784/94‑1 (MQ=60)
ATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGC > SRR4302533.4540562/1‑94 (MQ=60)
ATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGC < SRR4302533.2007155/94‑1 (MQ=60)
GGGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTG < SRR4302533.5454927/94‑1 (MQ=60)
GGGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCAATTACGGCAATAACTTCAATGTTCTCATAACGCTGT > SRR4302533.5867314/1‑94 (MQ=60)
GGAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTG < SRR4302533.2834115/94‑1 (MQ=60)
GAATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGC < SRR4302533.1673218/94‑1 (MQ=60)
AATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCT > SRR4302533.4855382/1‑94 (MQ=60)
ATTTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTA > SRR4302533.759836/1‑94 (MQ=60)
AGTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTA < SRR4302533.3083949/94‑1 (MQ=60)
TTTGTGCAGCCATGCGATCCAGGATGGCGCGGGGTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAA > SRR4302533.313679/1‑94 (MQ=60)
TTGTGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAA > SRR4302533.567976/1‑94 (MQ=60)
TGCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCG < SRR4302533.5674568/94‑1 (MQ=60)
GCAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGG < SRR4302533.6133583/94‑1 (MQ=60)
CAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGC > SRR4302533.4398002/1‑94 (MQ=60)
CAGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGC‑ATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCG > SRR4302533.2163510/1‑94 (MQ=60)
AGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCG > SRR4302533.2910459/1‑94 (MQ=60)
AGCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCG > SRR4302533.4122127/1‑94 (MQ=60)
GCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGT < SRR4302533.4026870/94‑1 (MQ=60)
GCCATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGT > SRR4302533.1139851/1‑94 (MQ=60)
ATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTA > SRR4302533.5196795/1‑94 (MQ=60)
ATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTA > SRR4302533.5884864/1‑94 (MQ=60)
ATGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTA < SRR4302533.1160114/94‑1 (MQ=60)
TGCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTAT < SRR4302533.3813012/94‑1 (MQ=60)
GCGATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATG < SRR4302533.278310/94‑1 (MQ=60)
GATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT > SRR4302533.4555294/1‑94 (MQ=60)
GATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT > SRR4302533.5721190/1‑94 (MQ=60)
GATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGT < SRR4302533.4089865/94‑1 (MQ=60)
ATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT > SRR4302533.5409829/1‑94 (MQ=60)
ATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT > SRR4302533.2118494/1‑94 (MQ=60)
ATCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTT > SRR4302533.735604/1‑94 (MQ=60)
TCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTT < SRR4302533.5532007/94‑1 (MQ=60)
TCCAGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTT < SRR4302533.5976020/94‑1 (MQ=60)
AGGATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCT < SRR4302533.2126459/94‑1 (MQ=60)
GATGGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCA < SRR4302533.4852173/94‑1 (MQ=60)
GGCGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACG < SRR4302533.4240305/94‑1 (MQ=60)
CGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATATCGCTGTGCTAAAGCGCCGTGTATGGTTTCCTCAACGTT < SRR4302533.5243876/94‑1 (MQ=60)
CGCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTT < SRR4302533.1380511/94‑1 (MQ=60)
GCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT < SRR4302533.5404628/94‑1 (MQ=60)
GCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT > SRR4302533.5158461/1‑94 (MQ=60)
GCGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT < SRR4302533.2587301/94‑1 (MQ=60)
|
TCCGGTTTTAAGCGCAATGGCTTTCCCCTGGTTTTGCGCCAGATGAATGACCCGCAAATGGGGAATTTGTGCAGCCATGCGATCCAGGATGGCACGGGTTTTATCTGTTGAACCGTCATTTACGGCAATAACTTCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTT > NC_000913/1086620‑1086806
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
